BLASTX nr result
ID: Zingiber25_contig00045625
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00045625
(330 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ESW30891.1| hypothetical protein PHAVU_002G191000g [Phaseolus... 65 9e-09
ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
ref|XP_006446829.1| hypothetical protein CICLE_v10017576mg [Citr... 63 4e-08
ref|XP_006468978.1| PREDICTED: pentatricopeptide repeat-containi... 63 5e-08
ref|XP_004970613.1| PREDICTED: pentatricopeptide repeat-containi... 63 5e-08
gb|EOX99930.1| Pentatricopeptide repeat-containing protein [Theo... 63 5e-08
ref|XP_006446832.1| hypothetical protein CICLE_v10018004mg [Citr... 62 1e-07
ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containi... 61 1e-07
emb|CBI22025.3| unnamed protein product [Vitis vinifera] 61 1e-07
ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containi... 61 1e-07
gb|EMJ17652.1| hypothetical protein PRUPE_ppa023564mg [Prunus pe... 61 2e-07
ref|XP_002464150.1| hypothetical protein SORBIDRAFT_01g013130 [S... 60 2e-07
gb|EXB92378.1| hypothetical protein L484_021362 [Morus notabilis] 59 5e-07
ref|XP_004504670.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
dbj|BAJ92110.1| predicted protein [Hordeum vulgare subsp. vulgare] 57 2e-06
tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea m... 57 3e-06
gb|AAO60036.1| hypothetical protein [Oryza sativa Japonica Group] 56 6e-06
ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containi... 56 6e-06
gb|EEE60175.1| hypothetical protein OsJ_13106 [Oryza sativa Japo... 56 6e-06
gb|EEC76412.1| hypothetical protein OsI_14066 [Oryza sativa Indi... 56 6e-06
>gb|ESW30891.1| hypothetical protein PHAVU_002G191000g [Phaseolus vulgaris]
Length = 673
Score = 65.1 bits (157), Expect = 9e-09
Identities = 31/80 (38%), Positives = 51/80 (63%)
Frame = +1
Query: 88 SKKEFAYLCSRGRLREALQGFLPQLWSDPNLFSHLLNAXXXXXXXXXXXXGRQLHAIIAI 267
+K++FA LCS+G +REA + F+ ++W +P+LFS+LL A G+Q+H++I
Sbjct: 40 AKEQFATLCSKGHVREAFESFVSEIWEEPHLFSNLLQA---CVRLKSVSLGKQIHSLILT 96
Query: 268 AGAASFHRFTGNHLFYMYHK 327
+G +S +F NHL +Y K
Sbjct: 97 SGCSS-DKFISNHLLNLYSK 115
>ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/78 (41%), Positives = 49/78 (62%)
Frame = +1
Query: 94 KEFAYLCSRGRLREALQGFLPQLWSDPNLFSHLLNAXXXXXXXXXXXXGRQLHAIIAIAG 273
++FA LCS+G +REA + FL ++W++P LFS+LL A G+QLH++I +G
Sbjct: 43 EQFATLCSKGHIREAFESFLSEIWAEPRLFSNLLQA---CIPLKSVSLGKQLHSLIFTSG 99
Query: 274 AASFHRFTGNHLFYMYHK 327
+S +F NHL +Y K
Sbjct: 100 CSS-DKFISNHLLNLYSK 116
>ref|XP_006446829.1| hypothetical protein CICLE_v10017576mg [Citrus clementina]
gi|557549440|gb|ESR60069.1| hypothetical protein
CICLE_v10017576mg [Citrus clementina]
Length = 559
Score = 63.2 bits (152), Expect = 4e-08
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = +1
Query: 88 SKKEFAYLCSRGRLREALQGFLPQLWSDPNLFSHLLNAXXXXXXXXXXXXGRQLHAIIAI 267
S +EF LCS+G ++EA+ F ++WSDP LFSHL+ + +QLH++I
Sbjct: 21 STEEFINLCSKGHIKEAVNRFKSEIWSDPTLFSHLIQS---CTLKKSLSCSKQLHSLIVT 77
Query: 268 AGAASFHRFTGNHLFYMYHKL 330
+G +S + F NHL MY K+
Sbjct: 78 SGCSS-NNFICNHLLNMYSKI 97
>ref|XP_006468978.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like isoform X1 [Citrus sinensis]
gi|568829336|ref|XP_006468979.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g41080-like isoform X2 [Citrus sinensis]
Length = 654
Score = 62.8 bits (151), Expect = 5e-08
Identities = 32/81 (39%), Positives = 47/81 (58%)
Frame = +1
Query: 88 SKKEFAYLCSRGRLREALQGFLPQLWSDPNLFSHLLNAXXXXXXXXXXXXGRQLHAIIAI 267
S +EF LCS+G ++EA F ++WSDP LFSHL+ + +QLH++I
Sbjct: 21 STEEFINLCSKGHIKEAFNRFKSEIWSDPTLFSHLIQS---CTLKKSLSCSKQLHSLIVT 77
Query: 268 AGAASFHRFTGNHLFYMYHKL 330
+G +S + F NHL MY K+
Sbjct: 78 SGCSS-NNFICNHLLNMYSKI 97
>ref|XP_004970613.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Setaria italica]
Length = 647
Score = 62.8 bits (151), Expect = 5e-08
Identities = 39/82 (47%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +1
Query: 88 SKKEFAYLCSRGRLREALQG-FLPQLWSDPNLFSHLLNAXXXXXXXXXXXXGRQLHAIIA 264
+K+E LCSRGRL++AL F LWS+P+LFSHL A RQLHA A
Sbjct: 16 AKEEIIRLCSRGRLKDALHHRFREVLWSEPDLFSHLFRACRALPLL------RQLHAFAA 69
Query: 265 IAGAASFHRFTGNHLFYMYHKL 330
+GAA+ RFT NHL Y L
Sbjct: 70 TSGAAT-DRFTANHLLLAYADL 90
>gb|EOX99930.1| Pentatricopeptide repeat-containing protein [Theobroma cacao]
Length = 672
Score = 62.8 bits (151), Expect = 5e-08
Identities = 31/77 (40%), Positives = 46/77 (59%)
Frame = +1
Query: 97 EFAYLCSRGRLREALQGFLPQLWSDPNLFSHLLNAXXXXXXXXXXXXGRQLHAIIAIAGA 276
E +LCS+G ++A F PQ+W+DP+LFSHL+ + G+QLH+++ +G
Sbjct: 42 ELTHLCSKGLAKQAFDRFHPQIWADPSLFSHLIQS---CIPQNSLSLGKQLHSLVITSG- 97
Query: 277 ASFHRFTGNHLFYMYHK 327
+S RF NHL MY K
Sbjct: 98 SSKDRFISNHLLNMYSK 114
>ref|XP_006446832.1| hypothetical protein CICLE_v10018004mg [Citrus clementina]
gi|557549443|gb|ESR60072.1| hypothetical protein
CICLE_v10018004mg [Citrus clementina]
Length = 632
Score = 61.6 bits (148), Expect = 1e-07
Identities = 32/81 (39%), Positives = 46/81 (56%)
Frame = +1
Query: 88 SKKEFAYLCSRGRLREALQGFLPQLWSDPNLFSHLLNAXXXXXXXXXXXXGRQLHAIIAI 267
S +EF LCS+G ++EA F ++WSDP LFSHL+ +QLH++I
Sbjct: 21 STEEFINLCSKGHIKEAFNRFKSEIWSDPTLFSHLIQ---WCTLKKSLSCSKQLHSLIVT 77
Query: 268 AGAASFHRFTGNHLFYMYHKL 330
+G +S + F NHL MY K+
Sbjct: 78 SGCSS-NSFICNHLLNMYSKI 97
>ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 61.2 bits (147), Expect = 1e-07
Identities = 32/81 (39%), Positives = 47/81 (58%)
Frame = +1
Query: 88 SKKEFAYLCSRGRLREALQGFLPQLWSDPNLFSHLLNAXXXXXXXXXXXXGRQLHAIIAI 267
S +EF LC+ GR+++A F ++WSDP+LFSHLL + G+Q+H++I
Sbjct: 34 SLQEFTSLCNDGRIKQAYDTFTSEIWSDPSLFSHLLQS---CIKLGSLFGGKQVHSLIIT 90
Query: 268 AGAASFHRFTGNHLFYMYHKL 330
+G S +F NHL Y KL
Sbjct: 91 SG-GSKDKFISNHLLNFYSKL 110
>emb|CBI22025.3| unnamed protein product [Vitis vinifera]
Length = 489
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/77 (40%), Positives = 45/77 (58%)
Frame = +1
Query: 97 EFAYLCSRGRLREALQGFLPQLWSDPNLFSHLLNAXXXXXXXXXXXXGRQLHAIIAIAGA 276
EF LCS+G L++A F +WS+P+LFSHLL + G+QLH++I +G
Sbjct: 27 EFTNLCSKGHLKQAFDRFSSHIWSEPSLFSHLLQS---CISENSLSLGKQLHSLIITSGC 83
Query: 277 ASFHRFTGNHLFYMYHK 327
+S +F NHL +Y K
Sbjct: 84 SS-DKFISNHLLNLYSK 99
>ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/77 (40%), Positives = 45/77 (58%)
Frame = +1
Query: 97 EFAYLCSRGRLREALQGFLPQLWSDPNLFSHLLNAXXXXXXXXXXXXGRQLHAIIAIAGA 276
EF LCS+G L++A F +WS+P+LFSHLL + G+QLH++I +G
Sbjct: 27 EFTNLCSKGHLKQAFDRFSSHIWSEPSLFSHLLQS---CISENSLSLGKQLHSLIITSGC 83
Query: 277 ASFHRFTGNHLFYMYHK 327
+S +F NHL +Y K
Sbjct: 84 SS-DKFISNHLLNLYSK 99
>gb|EMJ17652.1| hypothetical protein PRUPE_ppa023564mg [Prunus persica]
Length = 670
Score = 60.8 bits (146), Expect = 2e-07
Identities = 30/79 (37%), Positives = 47/79 (59%)
Frame = +1
Query: 94 KEFAYLCSRGRLREALQGFLPQLWSDPNLFSHLLNAXXXXXXXXXXXXGRQLHAIIAIAG 273
++ + LCS+G ++EA + F ++WS+P+LFSHLL A G+QLH++I +G
Sbjct: 39 EQLSSLCSKGHIKEAFESFKSEIWSNPSLFSHLLQA---CIPRKSLSLGKQLHSLIITSG 95
Query: 274 AASFHRFTGNHLFYMYHKL 330
S +F NHL Y K+
Sbjct: 96 -CSADKFVSNHLLNFYSKV 113
>ref|XP_002464150.1| hypothetical protein SORBIDRAFT_01g013130 [Sorghum bicolor]
gi|241918004|gb|EER91148.1| hypothetical protein
SORBIDRAFT_01g013130 [Sorghum bicolor]
Length = 472
Score = 60.5 bits (145), Expect = 2e-07
Identities = 37/81 (45%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +1
Query: 91 KKEFAYLCSRGRLREALQG-FLPQLWSDPNLFSHLLNAXXXXXXXXXXXXGRQLHAIIAI 267
++E LCS GR++EAL G F LWS+P LFSH+ A RQLHA A
Sbjct: 18 REEIIRLCSTGRVKEALHGRFREYLWSEPGLFSHIFRACRALPLL------RQLHAFAAT 71
Query: 268 AGAASFHRFTGNHLFYMYHKL 330
+GAA+ RFT NHL Y L
Sbjct: 72 SGAAA-DRFTANHLLLGYADL 91
>gb|EXB92378.1| hypothetical protein L484_021362 [Morus notabilis]
Length = 673
Score = 59.3 bits (142), Expect = 5e-07
Identities = 31/81 (38%), Positives = 46/81 (56%)
Frame = +1
Query: 88 SKKEFAYLCSRGRLREALQGFLPQLWSDPNLFSHLLNAXXXXXXXXXXXXGRQLHAIIAI 267
S +EF LCS+G ++EA + F ++WSD +LF HL+ A G+QLH++
Sbjct: 41 SIEEFTALCSKGHVKEAFKSFRSEIWSDTSLFCHLVQA---CILRKSLPMGKQLHSLTIT 97
Query: 268 AGAASFHRFTGNHLFYMYHKL 330
+G ++F NHL MY KL
Sbjct: 98 SGC--LNKFFSNHLLSMYSKL 116
>ref|XP_004504670.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cicer arietinum]
Length = 683
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/80 (36%), Positives = 47/80 (58%)
Frame = +1
Query: 88 SKKEFAYLCSRGRLREALQGFLPQLWSDPNLFSHLLNAXXXXXXXXXXXXGRQLHAIIAI 267
+K+ LCS+G ++EA + F+ ++W +P LFS+LL A G+QLH++I
Sbjct: 50 TKQLLVTLCSKGHIKEAFESFVYEIWEEPRLFSNLLQA---CIPTNSVFAGKQLHSLILT 106
Query: 268 AGAASFHRFTGNHLFYMYHK 327
+G +S +F NHL +Y K
Sbjct: 107 SGCSS-DKFISNHLLNLYSK 125
>dbj|BAJ92110.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 503
Score = 57.4 bits (137), Expect = 2e-06
Identities = 37/82 (45%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +1
Query: 88 SKKEFAYLCSRGRLREALQG-FLPQLWSDPNLFSHLLNAXXXXXXXXXXXXGRQLHAIIA 264
+K EF LCS GRL++AL F LWSDPNLF+H+ A QLHA A
Sbjct: 16 AKGEFIRLCSSGRLKDALHHPFRDVLWSDPNLFAHVFRACRAIPLL------HQLHAFAA 69
Query: 265 IAGAASFHRFTGNHLFYMYHKL 330
+GAA+ RFT N+L Y L
Sbjct: 70 TSGAAA-DRFTTNNLMLAYADL 90
>tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 57.0 bits (136), Expect = 3e-06
Identities = 35/81 (43%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +1
Query: 91 KKEFAYLCSRGRLREAL-QGFLPQLWSDPNLFSHLLNAXXXXXXXXXXXXGRQLHAIIAI 267
+++ LCS GR++EAL + F LWS+P LFSH+ A RQLHA A
Sbjct: 17 REDIIRLCSTGRVKEALHRRFREGLWSEPGLFSHIFRACQALPLL------RQLHAFAAT 70
Query: 268 AGAASFHRFTGNHLFYMYHKL 330
+GAA+ RFT NHL Y L
Sbjct: 71 SGAAA-DRFTANHLLLAYADL 90
>gb|AAO60036.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 704
Score = 55.8 bits (133), Expect = 6e-06
Identities = 39/83 (46%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = +1
Query: 88 SKKEFAYLCSRGRLREAL-QGFLPQLWSD-PNLFSHLLNAXXXXXXXXXXXXGRQLHAII 261
+K EF LC+ GRLR+AL + F LWSD LFSHL A RQLHA
Sbjct: 80 TKDEFVRLCATGRLRDALRRPFRGVLWSDAARLFSHLFRACRALRPL------RQLHAFA 133
Query: 262 AIAGAASFHRFTGNHLFYMYHKL 330
A +GAA+ RFT NHL Y L
Sbjct: 134 ATSGAAT-DRFTANHLMLAYADL 155
>ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Brachypodium distachyon]
Length = 647
Score = 55.8 bits (133), Expect = 6e-06
Identities = 37/82 (45%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +1
Query: 88 SKKEFAYLCSRGRLREAL-QGFLPQLWSDPNLFSHLLNAXXXXXXXXXXXXGRQLHAIIA 264
+K EF LCS GRL++AL F LWSD +LFSH+ A RQLHA A
Sbjct: 16 AKDEFIRLCSSGRLKDALHHPFRGVLWSDASLFSHIFRACRAIPLL------RQLHAFAA 69
Query: 265 IAGAASFHRFTGNHLFYMYHKL 330
+GAA+ RFT N+L Y L
Sbjct: 70 TSGAAA-DRFTTNNLLLAYADL 90
>gb|EEE60175.1| hypothetical protein OsJ_13106 [Oryza sativa Japonica Group]
Length = 628
Score = 55.8 bits (133), Expect = 6e-06
Identities = 39/83 (46%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = +1
Query: 88 SKKEFAYLCSRGRLREAL-QGFLPQLWSD-PNLFSHLLNAXXXXXXXXXXXXGRQLHAII 261
+K EF LC+ GRLR+AL + F LWSD LFSHL A RQLHA
Sbjct: 14 TKDEFVRLCATGRLRDALRRPFRGVLWSDAARLFSHLFRACRALRPL------RQLHAFA 67
Query: 262 AIAGAASFHRFTGNHLFYMYHKL 330
A +GAA+ RFT NHL Y L
Sbjct: 68 ATSGAAT-DRFTANHLMLAYADL 89
>gb|EEC76412.1| hypothetical protein OsI_14066 [Oryza sativa Indica Group]
Length = 628
Score = 55.8 bits (133), Expect = 6e-06
Identities = 39/83 (46%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = +1
Query: 88 SKKEFAYLCSRGRLREAL-QGFLPQLWSD-PNLFSHLLNAXXXXXXXXXXXXGRQLHAII 261
+K EF LC+ GRLR+AL + F LWSD LFSHL A RQLHA
Sbjct: 14 TKDEFVRLCATGRLRDALRRPFRGVLWSDAARLFSHLFRACRALRPL------RQLHAFA 67
Query: 262 AIAGAASFHRFTGNHLFYMYHKL 330
A +GAA+ RFT NHL Y L
Sbjct: 68 ATSGAAT-DRFTANHLMLAYADL 89