BLASTX nr result
ID: Zingiber25_contig00045618
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00045618
(254 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003561889.1| PREDICTED: replication protein A 70 kDa DNA-... 105 8e-21
gb|EMS53693.1| Replication protein A 70 kDa DNA-binding subunit ... 104 1e-20
emb|CBI15109.3| unnamed protein product [Vitis vinifera] 91 2e-16
ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-... 91 2e-16
emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera] 91 2e-16
ref|XP_002468278.1| hypothetical protein SORBIDRAFT_01g042890 [S... 89 8e-16
ref|XP_004985197.1| PREDICTED: replication protein A 70 kDa DNA-... 87 2e-15
ref|XP_006345121.1| PREDICTED: replication protein A 70 kDa DNA-... 87 3e-15
ref|XP_004236053.1| PREDICTED: replication protein A 70 kDa DNA-... 87 3e-15
ref|XP_006477677.1| PREDICTED: replication protein A 70 kDa DNA-... 86 4e-15
gb|AFW89200.1| hypothetical protein ZEAMMB73_192507 [Zea mays] 86 4e-15
ref|NP_001141474.1| Replication protein A DNA-binding subunit [Z... 86 4e-15
ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-... 86 5e-15
dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea... 86 7e-15
ref|XP_006440765.1| hypothetical protein CICLE_v10019317mg [Citr... 85 9e-15
ref|XP_004508670.1| PREDICTED: replication protein A 70 kDa DNA-... 85 9e-15
ref|XP_006649629.1| PREDICTED: replication protein A 70 kDa DNA-... 85 1e-14
ref|XP_006280119.1| hypothetical protein CARUB_v10026014mg, part... 84 1e-14
gb|EPS69068.1| hypothetical protein M569_05699, partial [Genlise... 82 7e-14
gb|EOY22080.1| Replication protein A 70 kDa DNA-binding subunit ... 81 1e-13
>ref|XP_003561889.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Brachypodium distachyon]
Length = 635
Score = 105 bits (261), Expect = 8e-21
Identities = 48/74 (64%), Positives = 64/74 (86%)
Frame = -2
Query: 223 ARCVTPGAVSMILSNPSPESPSDVPEIIVQVLDLKPIGTSSTRFTFMATDGEMKLKAMLP 44
A+ VTP A+++IL+N SPESP DVPEI+VQV+DLKP+G++ TRFTFMA+DG+ K+KAMLP
Sbjct: 3 AKSVTPDALAIILANRSPESPEDVPEIVVQVVDLKPLGSTGTRFTFMASDGKAKMKAMLP 62
Query: 43 TYLSTEIQSGKLQN 2
T ++E+ SG LQN
Sbjct: 63 TNFASEVNSGNLQN 76
>gb|EMS53693.1| Replication protein A 70 kDa DNA-binding subunit [Triticum urartu]
Length = 592
Score = 104 bits (260), Expect = 1e-20
Identities = 51/74 (68%), Positives = 64/74 (86%)
Frame = -2
Query: 223 ARCVTPGAVSMILSNPSPESPSDVPEIIVQVLDLKPIGTSSTRFTFMATDGEMKLKAMLP 44
A+ VTP AV++ILSNP+PESP DVPEI+VQVLDLKPIG +RFTFMA+DGE K+KA+L
Sbjct: 3 AKSVTPSAVALILSNPTPESPDDVPEIVVQVLDLKPIG---SRFTFMASDGEAKVKAILS 59
Query: 43 TYLSTEIQSGKLQN 2
T+ ++E+ SGKLQN
Sbjct: 60 THFASEVHSGKLQN 73
>emb|CBI15109.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 90.5 bits (223), Expect = 2e-16
Identities = 44/75 (58%), Positives = 57/75 (76%)
Frame = -2
Query: 226 MARCVTPGAVSMILSNPSPESPSDVPEIIVQVLDLKPIGTSSTRFTFMATDGEMKLKAML 47
MA+ +TP +S ILSNPSP+S +++PEIIVQV+DL PIG R+ F A DG+MKLKAM
Sbjct: 1 MAKSITPNGISTILSNPSPDSSTELPEIIVQVIDLTPIG---NRYKFTANDGKMKLKAMF 57
Query: 46 PTYLSTEIQSGKLQN 2
P+ S+EI SG +QN
Sbjct: 58 PSSFSSEINSGNIQN 72
>ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform
1 [Vitis vinifera]
Length = 625
Score = 90.5 bits (223), Expect = 2e-16
Identities = 44/75 (58%), Positives = 57/75 (76%)
Frame = -2
Query: 226 MARCVTPGAVSMILSNPSPESPSDVPEIIVQVLDLKPIGTSSTRFTFMATDGEMKLKAML 47
MA+ +TP +S ILSNPSP+S +++PEIIVQV+DL PIG R+ F A DG+MKLKAM
Sbjct: 1 MAKSITPNGISTILSNPSPDSSTELPEIIVQVIDLTPIG---NRYKFTANDGKMKLKAMF 57
Query: 46 PTYLSTEIQSGKLQN 2
P+ S+EI SG +QN
Sbjct: 58 PSSFSSEINSGNIQN 72
>emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera]
Length = 634
Score = 90.5 bits (223), Expect = 2e-16
Identities = 44/75 (58%), Positives = 57/75 (76%)
Frame = -2
Query: 226 MARCVTPGAVSMILSNPSPESPSDVPEIIVQVLDLKPIGTSSTRFTFMATDGEMKLKAML 47
MA+ +TP +S ILSNPSP+S +++PEIIVQV+DL PIG R+ F A DG+MKLKAM
Sbjct: 1 MAKSITPNGISTILSNPSPDSSTELPEIIVQVIDLTPIG---NRYKFTANDGKMKLKAMF 57
Query: 46 PTYLSTEIQSGKLQN 2
P+ S+EI SG +QN
Sbjct: 58 PSSFSSEINSGNIQN 72
>ref|XP_002468278.1| hypothetical protein SORBIDRAFT_01g042890 [Sorghum bicolor]
gi|241922132|gb|EER95276.1| hypothetical protein
SORBIDRAFT_01g042890 [Sorghum bicolor]
Length = 623
Score = 88.6 bits (218), Expect = 8e-16
Identities = 45/77 (58%), Positives = 60/77 (77%)
Frame = -2
Query: 232 LEMARCVTPGAVSMILSNPSPESPSDVPEIIVQVLDLKPIGTSSTRFTFMATDGEMKLKA 53
++ A VTPGAVS IL++PS S VP+++VQVLDLK IGT S RF+FMATDG+ K+KA
Sbjct: 1 MDAANSVTPGAVSHILAHPSTGSDGAVPDLVVQVLDLKSIGTGS-RFSFMATDGKDKIKA 59
Query: 52 MLPTYLSTEIQSGKLQN 2
M PT ++E++SG L+N
Sbjct: 60 MFPTSFASEVRSGNLKN 76
>ref|XP_004985197.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Setaria italica]
Length = 623
Score = 87.4 bits (215), Expect = 2e-15
Identities = 44/77 (57%), Positives = 57/77 (74%)
Frame = -2
Query: 232 LEMARCVTPGAVSMILSNPSPESPSDVPEIIVQVLDLKPIGTSSTRFTFMATDGEMKLKA 53
++ A+ VTPGAVS IL PSP + VPE++VQV+DLK IG RF FMA+DG+ K+KA
Sbjct: 1 MDAAKSVTPGAVSHILEKPSPADAATVPELVVQVVDLKSIG---NRFGFMASDGKDKIKA 57
Query: 52 MLPTYLSTEIQSGKLQN 2
MLPT + E++SG LQN
Sbjct: 58 MLPTQFAAEVRSGNLQN 74
>ref|XP_006345121.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like
[Solanum tuberosum]
Length = 614
Score = 86.7 bits (213), Expect = 3e-15
Identities = 43/75 (57%), Positives = 58/75 (77%)
Frame = -2
Query: 226 MARCVTPGAVSMILSNPSPESPSDVPEIIVQVLDLKPIGTSSTRFTFMATDGEMKLKAML 47
MA+ V+P A+S IL+NPSP+S SD+PEIIVQV+DLKP G R+ F A DG+MK+K +L
Sbjct: 1 MAKTVSPDAISTILANPSPDSSSDLPEIIVQVVDLKPTG---NRYMFSANDGKMKIKGIL 57
Query: 46 PTYLSTEIQSGKLQN 2
+ LS+E+ SG +QN
Sbjct: 58 QSSLSSEVISGSIQN 72
>ref|XP_004236053.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Solanum lycopersicum]
Length = 614
Score = 86.7 bits (213), Expect = 3e-15
Identities = 43/75 (57%), Positives = 58/75 (77%)
Frame = -2
Query: 226 MARCVTPGAVSMILSNPSPESPSDVPEIIVQVLDLKPIGTSSTRFTFMATDGEMKLKAML 47
MA+ V+P A+S IL+NPSP+S SD+PEIIVQV+DLKP G R+ F A DG+MK+K +L
Sbjct: 1 MAKMVSPDAISTILANPSPDSSSDLPEIIVQVVDLKPTG---NRYMFSANDGKMKIKGIL 57
Query: 46 PTYLSTEIQSGKLQN 2
+ LS+E+ SG +QN
Sbjct: 58 QSSLSSEVISGSIQN 72
>ref|XP_006477677.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like
[Citrus sinensis]
Length = 623
Score = 86.3 bits (212), Expect = 4e-15
Identities = 44/75 (58%), Positives = 58/75 (77%)
Frame = -2
Query: 226 MARCVTPGAVSMILSNPSPESPSDVPEIIVQVLDLKPIGTSSTRFTFMATDGEMKLKAML 47
M + V+P A+S ILSNPSPES SD+PEI+VQVLDLK G R+ F A+DG+ +LKA+L
Sbjct: 1 MDKTVSPDAISTILSNPSPESSSDIPEIVVQVLDLKLTG---NRYMFNASDGKKRLKAIL 57
Query: 46 PTYLSTEIQSGKLQN 2
P+ LS+E+ SG +QN
Sbjct: 58 PSNLSSEVISGNIQN 72
>gb|AFW89200.1| hypothetical protein ZEAMMB73_192507 [Zea mays]
Length = 96
Score = 86.3 bits (212), Expect = 4e-15
Identities = 44/77 (57%), Positives = 58/77 (75%)
Frame = -2
Query: 232 LEMARCVTPGAVSMILSNPSPESPSDVPEIIVQVLDLKPIGTSSTRFTFMATDGEMKLKA 53
++ A+ VTPGAVS IL++PS S V +++VQVLDLK IG S RF+F ATDG K+KA
Sbjct: 1 MDAAKSVTPGAVSYILAHPSTGSDGAVSDLVVQVLDLKSIGMGS-RFSFTATDGNDKIKA 59
Query: 52 MLPTYLSTEIQSGKLQN 2
MLPTY ++E+ SG L+N
Sbjct: 60 MLPTYFASEVHSGNLKN 76
>ref|NP_001141474.1| Replication protein A DNA-binding subunit [Zea mays]
gi|194704722|gb|ACF86445.1| unknown [Zea mays]
gi|195647462|gb|ACG43199.1| replication protein A 70 kDa
DNA-binding subunit [Zea mays]
gi|413956552|gb|AFW89201.1| Replication protein A
DNA-binding subunit [Zea mays]
Length = 623
Score = 86.3 bits (212), Expect = 4e-15
Identities = 44/77 (57%), Positives = 58/77 (75%)
Frame = -2
Query: 232 LEMARCVTPGAVSMILSNPSPESPSDVPEIIVQVLDLKPIGTSSTRFTFMATDGEMKLKA 53
++ A+ VTPGAVS IL++PS S V +++VQVLDLK IG S RF+F ATDG K+KA
Sbjct: 1 MDAAKSVTPGAVSYILAHPSTGSDGAVSDLVVQVLDLKSIGMGS-RFSFTATDGNDKIKA 59
Query: 52 MLPTYLSTEIQSGKLQN 2
MLPTY ++E+ SG L+N
Sbjct: 60 MLPTYFASEVHSGNLKN 76
>ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cucumis sativus]
Length = 603
Score = 85.9 bits (211), Expect = 5e-15
Identities = 41/75 (54%), Positives = 57/75 (76%)
Frame = -2
Query: 226 MARCVTPGAVSMILSNPSPESPSDVPEIIVQVLDLKPIGTSSTRFTFMATDGEMKLKAML 47
MA T G +S +LSNPSP+SPSDVP+++VQV+DLK G R+ F A+DG MKLKA+L
Sbjct: 1 MASAPTAGGISKVLSNPSPDSPSDVPDVVVQVIDLKATG---NRYMFTASDGVMKLKAIL 57
Query: 46 PTYLSTEIQSGKLQN 2
P+ L++++ SG +QN
Sbjct: 58 PSNLTSDVISGNIQN 72
>dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea nil]
Length = 604
Score = 85.5 bits (210), Expect = 7e-15
Identities = 44/75 (58%), Positives = 57/75 (76%)
Frame = -2
Query: 226 MARCVTPGAVSMILSNPSPESPSDVPEIIVQVLDLKPIGTSSTRFTFMATDGEMKLKAML 47
M R VTP A+S IL+NPSP+S SD+PE+IVQV+DLK G R+ F A DG+MKLKA+L
Sbjct: 1 MERSVTPDAISAILANPSPDSGSDLPELIVQVVDLKQAG---NRYMFTANDGKMKLKAIL 57
Query: 46 PTYLSTEIQSGKLQN 2
+ LS+E+ SG +QN
Sbjct: 58 QSSLSSEVISGSIQN 72
>ref|XP_006440765.1| hypothetical protein CICLE_v10019317mg [Citrus clementina]
gi|557543027|gb|ESR54005.1| hypothetical protein
CICLE_v10019317mg [Citrus clementina]
Length = 623
Score = 85.1 bits (209), Expect = 9e-15
Identities = 43/75 (57%), Positives = 58/75 (77%)
Frame = -2
Query: 226 MARCVTPGAVSMILSNPSPESPSDVPEIIVQVLDLKPIGTSSTRFTFMATDGEMKLKAML 47
M + V+P A+S ILSNPSP+S SD+PEI+VQVLDLK G R+ F A+DG+ +LKA+L
Sbjct: 1 MDKTVSPDAISTILSNPSPDSSSDIPEIVVQVLDLKLTG---NRYMFNASDGKKRLKAIL 57
Query: 46 PTYLSTEIQSGKLQN 2
P+ LS+E+ SG +QN
Sbjct: 58 PSNLSSEVISGNIQN 72
>ref|XP_004508670.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cicer arietinum]
Length = 617
Score = 85.1 bits (209), Expect = 9e-15
Identities = 42/75 (56%), Positives = 57/75 (76%)
Frame = -2
Query: 226 MARCVTPGAVSMILSNPSPESPSDVPEIIVQVLDLKPIGTSSTRFTFMATDGEMKLKAML 47
MA+ V+P A+S +LSNPSP+S SD+P+I+VQVLDLK S R+ F A DG MKL+A+L
Sbjct: 1 MAKSVSPNAISTLLSNPSPDSSSDLPDIVVQVLDLK---QSGNRYMFSANDGNMKLRAIL 57
Query: 46 PTYLSTEIQSGKLQN 2
P+ +E+ SGK+QN
Sbjct: 58 PSNQYSEVLSGKIQN 72
>ref|XP_006649629.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like
[Oryza brachyantha]
Length = 632
Score = 84.7 bits (208), Expect = 1e-14
Identities = 45/76 (59%), Positives = 57/76 (75%)
Frame = -2
Query: 229 EMARCVTPGAVSMILSNPSPESPSDVPEIIVQVLDLKPIGTSSTRFTFMATDGEMKLKAM 50
+ A VT GAV+ IL NPSP + +DVP I++QV+DLKPIG+ RFTFMA+DGE K+K M
Sbjct: 4 DAAPSVTRGAVAFILENPSPAA-ADVPGIVLQVVDLKPIGS---RFTFMASDGEAKIKTM 59
Query: 49 LPTYLSTEIQSGKLQN 2
LPT E++SG LQN
Sbjct: 60 LPTQFLPEVRSGNLQN 75
>ref|XP_006280119.1| hypothetical protein CARUB_v10026014mg, partial [Capsella rubella]
gi|482548823|gb|EOA13017.1| hypothetical protein
CARUB_v10026014mg, partial [Capsella rubella]
Length = 680
Score = 84.3 bits (207), Expect = 1e-14
Identities = 47/82 (57%), Positives = 57/82 (69%)
Frame = -2
Query: 247 RRRIFLEMARCVTPGAVSMILSNPSPESPSDVPEIIVQVLDLKPIGTSSTRFTFMATDGE 68
R R +M VT GA+S +LSNPS +S SD PEI+VQV+DLKPIG R+TF A DG+
Sbjct: 43 REREREKMQTSVTAGAISTVLSNPSFDSSSDRPEIVVQVVDLKPIG---NRYTFSANDGK 99
Query: 67 MKLKAMLPTYLSTEIQSGKLQN 2
KLKAM L+ EI SGK+QN
Sbjct: 100 TKLKAMFTASLTPEIISGKIQN 121
>gb|EPS69068.1| hypothetical protein M569_05699, partial [Genlisea aurea]
Length = 460
Score = 82.0 bits (201), Expect = 7e-14
Identities = 39/73 (53%), Positives = 57/73 (78%)
Frame = -2
Query: 220 RCVTPGAVSMILSNPSPESPSDVPEIIVQVLDLKPIGTSSTRFTFMATDGEMKLKAMLPT 41
+ VTPGA+S+IL+NP P+S S+ EIIVQVLDLKP G ++ F+A+DG MK++A+L +
Sbjct: 1 KSVTPGALSLILANPCPDSSSEPAEIIVQVLDLKPTG---NKYVFLASDGRMKVRALLQS 57
Query: 40 YLSTEIQSGKLQN 2
LS ++ SG++QN
Sbjct: 58 SLSADVSSGEIQN 70
>gb|EOY22080.1| Replication protein A 70 kDa DNA-binding subunit [Theobroma cacao]
Length = 677
Score = 81.3 bits (199), Expect = 1e-13
Identities = 43/76 (56%), Positives = 57/76 (75%)
Frame = -2
Query: 229 EMARCVTPGAVSMILSNPSPESPSDVPEIIVQVLDLKPIGTSSTRFTFMATDGEMKLKAM 50
EMA+ VT A+S IL+NPSP+S S + EI+VQVLDLK G R+TF A+DG MKL+A+
Sbjct: 56 EMAKWVTRDAISTILANPSPDSASGLLEIVVQVLDLKLTG---NRYTFNASDGNMKLRAI 112
Query: 49 LPTYLSTEIQSGKLQN 2
P+ +S+EI SG +QN
Sbjct: 113 FPSNVSSEITSGSIQN 128