BLASTX nr result

ID: Zingiber25_contig00045430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00045430
         (528 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533826.1| protein transporter, putative [Ricinus commu...    57   2e-06
gb|EXB42395.1| TOM1-like protein 2 [Morus notabilis]                   55   1e-05

>ref|XP_002533826.1| protein transporter, putative [Ricinus communis]
           gi|223526243|gb|EEF28561.1| protein transporter,
           putative [Ricinus communis]
          Length = 734

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/129 (31%), Positives = 56/129 (43%), Gaps = 12/129 (9%)
 Frame = +1

Query: 43  QSHLQPELFDNSSAYPPPPWATSPDNVNANNPFAYNPFLSTTYQSHPLGVGAAAGYTSLH 222
           Q  LQP+    SS YPPPPWA +P   N  +    +P  ++   S P    AAA YT   
Sbjct: 595 QQQLQPQYTQYSSNYPPPPWAATPGYANGQS----HPSTTSNMFSTPQN-NAAASYTPAQ 649

Query: 223 DSRLVQHFNGDGSRVHNA------------PATGQPMDHRPYVYTSRLFSELLSKRNSSP 366
             R +QH N   SR  NA            P    P   +P++ + RLF +L    N+  
Sbjct: 650 APRSMQHNNSFNSRGSNALAMNGNPWASSGPRNTTPPGQKPFIPSYRLFEDLNVLGNADG 709

Query: 367 GLGDTGSSA 393
                GS++
Sbjct: 710 RFKMNGSTS 718


>gb|EXB42395.1| TOM1-like protein 2 [Morus notabilis]
          Length = 661

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 27/145 (18%)
 Frame = +1

Query: 40  PQSHLQPELFD--------NSSAYPPPPWATSPDNVNANNPF-AYNPFLSTTYQSH-PLG 189
           P SH+QP+            SS YPPPPWA +P   ++ + F   N F + T  S+ P+ 
Sbjct: 511 PSSHVQPQASSLVQPQPSTYSSGYPPPPWAATPGYYSSQSHFPTNNAFATHTKTSYRPVQ 570

Query: 190 VGAAAGYTSLHDSRLVQHFNGDGSRVHNAPATGQ-------------PMDHRPYVYTSRL 330
                 YT     + +QH+N   +R +     G+             P   +P++ + RL
Sbjct: 571 TNTTVSYTPAQSGQPLQHYNSFPARENGLAINGESRVAAPNARNPAPPAAQKPFIPSYRL 630

Query: 331 FSEL----LSKRNSSPGLGDTGSSA 393
           F +L     +  N+S GL  T   +
Sbjct: 631 FEDLNVFGSASGNASSGLAGTSGQS 655


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