BLASTX nr result

ID: Zingiber25_contig00045335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00045335
         (348 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006358749.1| PREDICTED: RING-H2 finger protein ATL72-like...   115   6e-24
ref|XP_004240864.1| PREDICTED: RING-H2 finger protein ATL72-like...   114   1e-23
ref|XP_006481185.1| PREDICTED: RING-H2 finger protein ATL74-like...   114   2e-23
ref|XP_006429572.1| hypothetical protein CICLE_v10013579mg, part...   114   2e-23
gb|EOY20123.1| RING/U-box superfamily protein [Theobroma cacao]       112   4e-23
gb|EXC23825.1| RING-H2 finger protein ATL72 [Morus notabilis]         111   1e-22
ref|XP_002323073.2| zinc finger family protein [Populus trichoca...   111   1e-22
ref|XP_003633866.1| PREDICTED: RING-H2 finger protein ATL72-like...   110   1e-22
ref|XP_002271473.1| PREDICTED: RING-H2 finger protein ATL72-like...   110   1e-22
ref|XP_002275084.1| PREDICTED: RING-H2 finger protein ATL72 [Vit...   110   1e-22
ref|XP_004302621.1| PREDICTED: RING-H2 finger protein ATL72-like...   109   4e-22
gb|EMJ07166.1| hypothetical protein PRUPE_ppa012052mg [Prunus pe...   108   6e-22
ref|XP_003528016.1| PREDICTED: RING-H2 finger protein ATL72-like...   108   7e-22
gb|EMJ19604.1| hypothetical protein PRUPE_ppa011446mg [Prunus pe...   107   2e-21
ref|XP_002520866.1| RING-H2 finger protein ATL3C, putative [Rici...   107   2e-21
ref|XP_006435916.1| hypothetical protein CICLE_v10032803mg [Citr...   105   6e-21
gb|EOY04466.1| RING/U-box superfamily protein isoform 2 [Theobro...   105   6e-21
gb|EOY04465.1| RING/U-box superfamily protein isoform 1 [Theobro...   105   6e-21
ref|XP_002528684.1| RING-H2 finger protein ATL5A, putative [Rici...   105   6e-21
ref|XP_002325483.2| hypothetical protein POPTR_0019s08600g [Popu...   105   8e-21

>ref|XP_006358749.1| PREDICTED: RING-H2 finger protein ATL72-like [Solanum tuberosum]
          Length = 204

 Score =  115 bits (288), Expect = 6e-24
 Identities = 53/86 (61%), Positives = 62/86 (72%)
 Frame = +3

Query: 3   RLPVAVYGPGAGVLATECPICLAEFADGEEVRVLPWCHHGFHVGCIDEWLSSHSSCPTCR 182
           +LP++VYG G  + AT+CPICL EF DGE+VRVLP CHHGFHV CID WL+ HSSCPTCR
Sbjct: 93  KLPLSVYGSGVNIPATDCPICLGEFVDGEKVRVLPKCHHGFHVKCIDIWLALHSSCPTCR 152

Query: 183 QSLLEDGSGPPAANTASQLNTAYRSN 260
           QSLLE  +    A  A  L T  R +
Sbjct: 153 QSLLEQNT---TAAAAGDLETGLRQS 175


>ref|XP_004240864.1| PREDICTED: RING-H2 finger protein ATL72-like [Solanum lycopersicum]
          Length = 210

 Score =  114 bits (285), Expect = 1e-23
 Identities = 50/73 (68%), Positives = 58/73 (79%)
 Frame = +3

Query: 3   RLPVAVYGPGAGVLATECPICLAEFADGEEVRVLPWCHHGFHVGCIDEWLSSHSSCPTCR 182
           +LP++VYG G  + AT+CPICL EF DGE+VRVLP CHHGFHV CID WL+ HSSCPTCR
Sbjct: 92  QLPLSVYGSGVNIPATDCPICLGEFVDGEKVRVLPKCHHGFHVKCIDIWLALHSSCPTCR 151

Query: 183 QSLLEDGSGPPAA 221
           QSLLE  +   AA
Sbjct: 152 QSLLEQNTTAAAA 164


>ref|XP_006481185.1| PREDICTED: RING-H2 finger protein ATL74-like [Citrus sinensis]
          Length = 192

 Score =  114 bits (284), Expect = 2e-23
 Identities = 50/78 (64%), Positives = 60/78 (76%)
 Frame = +3

Query: 3   RLPVAVYGPGAGVLATECPICLAEFADGEEVRVLPWCHHGFHVGCIDEWLSSHSSCPTCR 182
           R+PVAVYG G  + ATECPICL EF DGE+VRVLP C+HGFHV CID WL SHSSCP CR
Sbjct: 91  RIPVAVYGEGVDIPATECPICLGEFVDGEKVRVLPKCNHGFHVRCIDTWLLSHSSCPNCR 150

Query: 183 QSLLEDGSGPPAANTASQ 236
            SLL +     A+++A++
Sbjct: 151 HSLLNNNERSTASSSAAE 168


>ref|XP_006429572.1| hypothetical protein CICLE_v10013579mg, partial [Citrus clementina]
           gi|557531629|gb|ESR42812.1| hypothetical protein
           CICLE_v10013579mg, partial [Citrus clementina]
          Length = 188

 Score =  114 bits (284), Expect = 2e-23
 Identities = 50/78 (64%), Positives = 60/78 (76%)
 Frame = +3

Query: 3   RLPVAVYGPGAGVLATECPICLAEFADGEEVRVLPWCHHGFHVGCIDEWLSSHSSCPTCR 182
           R+PVAVYG G  + ATECPICL EF DGE+VRVLP C+HGFHV CID WL SHSSCP CR
Sbjct: 91  RIPVAVYGEGVDIPATECPICLGEFVDGEKVRVLPKCNHGFHVRCIDTWLLSHSSCPNCR 150

Query: 183 QSLLEDGSGPPAANTASQ 236
            SLL +     A+++A++
Sbjct: 151 HSLLNNNERSTASSSAAE 168


>gb|EOY20123.1| RING/U-box superfamily protein [Theobroma cacao]
          Length = 260

 Score =  112 bits (281), Expect = 4e-23
 Identities = 49/72 (68%), Positives = 55/72 (76%)
 Frame = +3

Query: 3   RLPVAVYGPGAGVLATECPICLAEFADGEEVRVLPWCHHGFHVGCIDEWLSSHSSCPTCR 182
           ++PVA+Y  G  + AT+CPICL EF DGE VRVLP CHHGFHV CID WL SHSSCPTCR
Sbjct: 96  QIPVAIYSSGINIKATDCPICLGEFIDGERVRVLPKCHHGFHVRCIDTWLLSHSSCPTCR 155

Query: 183 QSLLEDGSGPPA 218
           QSLLE  +   A
Sbjct: 156 QSLLEQPTSSDA 167


>gb|EXC23825.1| RING-H2 finger protein ATL72 [Morus notabilis]
          Length = 223

 Score =  111 bits (277), Expect = 1e-22
 Identities = 49/65 (75%), Positives = 54/65 (83%)
 Frame = +3

Query: 3   RLPVAVYGPGAGVLATECPICLAEFADGEEVRVLPWCHHGFHVGCIDEWLSSHSSCPTCR 182
           ++PVAVYG GAG+ ATECPICL EF DGE+VRVLP C+HGFHV CID WL SHSSCP CR
Sbjct: 96  QIPVAVYGSGAGIPATECPICLGEFVDGEKVRVLPKCNHGFHVRCIDTWLLSHSSCPNCR 155

Query: 183 QSLLE 197
             LLE
Sbjct: 156 ICLLE 160


>ref|XP_002323073.2| zinc finger family protein [Populus trichocarpa]
           gi|550321492|gb|EEF04834.2| zinc finger family protein
           [Populus trichocarpa]
          Length = 189

 Score =  111 bits (277), Expect = 1e-22
 Identities = 49/73 (67%), Positives = 56/73 (76%)
 Frame = +3

Query: 3   RLPVAVYGPGAGVLATECPICLAEFADGEEVRVLPWCHHGFHVGCIDEWLSSHSSCPTCR 182
           ++PVA+YG G  + ATECPICL EF DGE+VRVLP C+HGFHV CID WL SHSSCP CR
Sbjct: 93  QIPVAIYGAGGSISATECPICLGEFVDGEKVRVLPKCNHGFHVRCIDTWLLSHSSCPNCR 152

Query: 183 QSLLEDGSGPPAA 221
            SLLE  +   AA
Sbjct: 153 HSLLEHTTDSGAA 165


>ref|XP_003633866.1| PREDICTED: RING-H2 finger protein ATL72-like [Vitis vinifera]
          Length = 137

 Score =  110 bits (276), Expect = 1e-22
 Identities = 49/74 (66%), Positives = 58/74 (78%)
 Frame = +3

Query: 3   RLPVAVYGPGAGVLATECPICLAEFADGEEVRVLPWCHHGFHVGCIDEWLSSHSSCPTCR 182
           ++PVAVYG G  + AT+CPICL EF  G++VRVLP CHHGFH+ CID WL SHSSCPTCR
Sbjct: 36  QIPVAVYGSGTNIPATDCPICLGEFEQGDKVRVLPKCHHGFHMKCIDTWLVSHSSCPTCR 95

Query: 183 QSLLEDGSGPPAAN 224
            SLLE    PPA++
Sbjct: 96  HSLLEH---PPASD 106


>ref|XP_002271473.1| PREDICTED: RING-H2 finger protein ATL72-like [Vitis vinifera]
          Length = 195

 Score =  110 bits (276), Expect = 1e-22
 Identities = 50/73 (68%), Positives = 56/73 (76%)
 Frame = +3

Query: 3   RLPVAVYGPGAGVLATECPICLAEFADGEEVRVLPWCHHGFHVGCIDEWLSSHSSCPTCR 182
           ++PVAVYGPG  + ATECPICL EF  GE+VRVLP C+HGFHV CID WL SHSSCP CR
Sbjct: 96  QIPVAVYGPGVEIPATECPICLGEFVQGEKVRVLPKCNHGFHVRCIDTWLVSHSSCPNCR 155

Query: 183 QSLLEDGSGPPAA 221
            SLLE  +   AA
Sbjct: 156 HSLLERPTTSDAA 168


>ref|XP_002275084.1| PREDICTED: RING-H2 finger protein ATL72 [Vitis vinifera]
           gi|147769463|emb|CAN70348.1| hypothetical protein
           VITISV_012580 [Vitis vinifera]
           gi|297736494|emb|CBI25365.3| unnamed protein product
           [Vitis vinifera]
          Length = 197

 Score =  110 bits (276), Expect = 1e-22
 Identities = 49/74 (66%), Positives = 58/74 (78%)
 Frame = +3

Query: 3   RLPVAVYGPGAGVLATECPICLAEFADGEEVRVLPWCHHGFHVGCIDEWLSSHSSCPTCR 182
           ++PVAVYG G  + AT+CPICL EF  G++VRVLP CHHGFH+ CID WL SHSSCPTCR
Sbjct: 96  QIPVAVYGSGTNIPATDCPICLGEFEQGDKVRVLPKCHHGFHMKCIDTWLVSHSSCPTCR 155

Query: 183 QSLLEDGSGPPAAN 224
            SLLE    PPA++
Sbjct: 156 HSLLEH---PPASD 166


>ref|XP_004302621.1| PREDICTED: RING-H2 finger protein ATL72-like [Fragaria vesca subsp.
           vesca]
          Length = 201

 Score =  109 bits (272), Expect = 4e-22
 Identities = 50/78 (64%), Positives = 56/78 (71%)
 Frame = +3

Query: 3   RLPVAVYGPGAGVLATECPICLAEFADGEEVRVLPWCHHGFHVGCIDEWLSSHSSCPTCR 182
           +LPVAVYG G  + ATECPICL EF +GE+VRVLP C+HGFHV CID WL SHSSCP CR
Sbjct: 89  QLPVAVYGEGTHIPATECPICLGEFEEGEKVRVLPKCNHGFHVRCIDTWLVSHSSCPNCR 148

Query: 183 QSLLEDGSGPPAANTASQ 236
            SLLE         T S+
Sbjct: 149 HSLLEHQQPSKKTRTTSR 166


>gb|EMJ07166.1| hypothetical protein PRUPE_ppa012052mg [Prunus persica]
          Length = 185

 Score =  108 bits (271), Expect = 6e-22
 Identities = 47/65 (72%), Positives = 53/65 (81%)
 Frame = +3

Query: 3   RLPVAVYGPGAGVLATECPICLAEFADGEEVRVLPWCHHGFHVGCIDEWLSSHSSCPTCR 182
           ++P+AVYG G  + ATECPICL EF DGE+VRVLP C+HGFHV CID WL SHSSCP CR
Sbjct: 68  QIPIAVYGSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCR 127

Query: 183 QSLLE 197
            SLLE
Sbjct: 128 HSLLE 132


>ref|XP_003528016.1| PREDICTED: RING-H2 finger protein ATL72-like [Glycine max]
          Length = 198

 Score =  108 bits (270), Expect = 7e-22
 Identities = 52/87 (59%), Positives = 62/87 (71%), Gaps = 5/87 (5%)
 Frame = +3

Query: 3   RLPVAVYGPG-AGVLATECPICLAEFADGEEVRVLPWCHHGFHVGCIDEWLSSHSSCPTC 179
           ++P+ VYG G A + AT+CPICL EF DGE+VRVLP C+HGFHV CID WL SHSSCP C
Sbjct: 94  QIPIVVYGSGSASIAATDCPICLGEFVDGEKVRVLPKCNHGFHVRCIDTWLLSHSSCPNC 153

Query: 180 RQSLLE----DGSGPPAANTASQLNTA 248
           RQSLLE     G+   AA T+  +  A
Sbjct: 154 RQSLLEHPTISGAVAVAAGTSHHVGNA 180


>gb|EMJ19604.1| hypothetical protein PRUPE_ppa011446mg [Prunus persica]
          Length = 210

 Score =  107 bits (267), Expect = 2e-21
 Identities = 47/82 (57%), Positives = 61/82 (74%)
 Frame = +3

Query: 3   RLPVAVYGPGAGVLATECPICLAEFADGEEVRVLPWCHHGFHVGCIDEWLSSHSSCPTCR 182
           ++P+  YG GA + AT+CPICL EF DG++VR+LP C+HGFHV CID W  SHSSCPTCR
Sbjct: 109 QIPIVAYGSGANIPATDCPICLGEFQDGQKVRLLPKCNHGFHVRCIDTWFLSHSSCPTCR 168

Query: 183 QSLLEDGSGPPAANTASQLNTA 248
            SLLE    P AA+ ++++  A
Sbjct: 169 HSLLEQ---PAAASDSAEVADA 187


>ref|XP_002520866.1| RING-H2 finger protein ATL3C, putative [Ricinus communis]
           gi|223539997|gb|EEF41575.1| RING-H2 finger protein
           ATL3C, putative [Ricinus communis]
          Length = 208

 Score =  107 bits (266), Expect = 2e-21
 Identities = 50/87 (57%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
 Frame = +3

Query: 3   RLPVAVYGP-GAGVLATECPICLAEFADGEEVRVLPWCHHGFHVGCIDEWLSSHSSCPTC 179
           ++PV +YG  G  ++AT+C ICL EF+DGE+VRVLP C+HGFHV CID WL SHSSCPTC
Sbjct: 98  QIPVVIYGAAGIQIIATDCAICLGEFSDGEKVRVLPKCNHGFHVRCIDTWLGSHSSCPTC 157

Query: 180 RQSLLEDGSGPPAANTASQLNTAYRSN 260
           RQSLLE  +  P  + A++ +   RS+
Sbjct: 158 RQSLLEQPA--PGNSDATEPDVEIRSH 182


>ref|XP_006435916.1| hypothetical protein CICLE_v10032803mg [Citrus clementina]
           gi|568865616|ref|XP_006486170.1| PREDICTED: RING-H2
           finger protein ATL72-like isoform X1 [Citrus sinensis]
           gi|568865618|ref|XP_006486171.1| PREDICTED: RING-H2
           finger protein ATL72-like isoform X2 [Citrus sinensis]
           gi|557538112|gb|ESR49156.1| hypothetical protein
           CICLE_v10032803mg [Citrus clementina]
          Length = 197

 Score =  105 bits (262), Expect = 6e-21
 Identities = 48/80 (60%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
 Frame = +3

Query: 3   RLPVAVYGP-GAGVLATECPICLAEFADGEEVRVLPWCHHGFHVGCIDEWLSSHSSCPTC 179
           ++PVAVYG  G  + AT+C ICL +F DGE+VRVLP C+HGFHV CID WL SHSSCPTC
Sbjct: 96  QIPVAVYGTAGVKIKATDCAICLVDFMDGEKVRVLPKCNHGFHVRCIDTWLMSHSSCPTC 155

Query: 180 RQSLLEDGSGPPAANTASQL 239
           R+SLL+  +   AA   S++
Sbjct: 156 RRSLLDQPTSSDAAEVDSEI 175


>gb|EOY04466.1| RING/U-box superfamily protein isoform 2 [Theobroma cacao]
           gi|508712570|gb|EOY04467.1| RING/U-box superfamily
           protein isoform 2 [Theobroma cacao]
          Length = 198

 Score =  105 bits (262), Expect = 6e-21
 Identities = 45/65 (69%), Positives = 52/65 (80%)
 Frame = +3

Query: 3   RLPVAVYGPGAGVLATECPICLAEFADGEEVRVLPWCHHGFHVGCIDEWLSSHSSCPTCR 182
           ++PVAVYG G    +TECPICL +F DGE+VRVLP C+HGFHV CID WL SHSSCP CR
Sbjct: 96  QIPVAVYGTGVNFPSTECPICLGDFVDGEKVRVLPKCNHGFHVRCIDTWLVSHSSCPNCR 155

Query: 183 QSLLE 197
            SLL+
Sbjct: 156 HSLLD 160


>gb|EOY04465.1| RING/U-box superfamily protein isoform 1 [Theobroma cacao]
          Length = 285

 Score =  105 bits (262), Expect = 6e-21
 Identities = 45/65 (69%), Positives = 52/65 (80%)
 Frame = +3

Query: 3   RLPVAVYGPGAGVLATECPICLAEFADGEEVRVLPWCHHGFHVGCIDEWLSSHSSCPTCR 182
           ++PVAVYG G    +TECPICL +F DGE+VRVLP C+HGFHV CID WL SHSSCP CR
Sbjct: 183 QIPVAVYGTGVNFPSTECPICLGDFVDGEKVRVLPKCNHGFHVRCIDTWLVSHSSCPNCR 242

Query: 183 QSLLE 197
            SLL+
Sbjct: 243 HSLLD 247


>ref|XP_002528684.1| RING-H2 finger protein ATL5A, putative [Ricinus communis]
           gi|223531856|gb|EEF33673.1| RING-H2 finger protein
           ATL5A, putative [Ricinus communis]
          Length = 186

 Score =  105 bits (262), Expect = 6e-21
 Identities = 46/68 (67%), Positives = 53/68 (77%)
 Frame = +3

Query: 3   RLPVAVYGPGAGVLATECPICLAEFADGEEVRVLPWCHHGFHVGCIDEWLSSHSSCPTCR 182
           ++PVAVYG    + ATECPICL EF DGE+VR+LP C+HGFHV CID WL SHSSCP CR
Sbjct: 91  QIPVAVYGTEVSIPATECPICLGEFLDGEKVRLLPKCNHGFHVRCIDTWLLSHSSCPNCR 150

Query: 183 QSLLEDGS 206
            SLL  G+
Sbjct: 151 LSLLXSGA 158


>ref|XP_002325483.2| hypothetical protein POPTR_0019s08600g [Populus trichocarpa]
           gi|550317030|gb|EEE99864.2| hypothetical protein
           POPTR_0019s08600g [Populus trichocarpa]
          Length = 192

 Score =  105 bits (261), Expect = 8e-21
 Identities = 50/85 (58%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
 Frame = +3

Query: 3   RLPVAVYG-PGAGVLATECPICLAEFADGEEVRVLPWCHHGFHVGCIDEWLSSHSSCPTC 179
           R+PV +YG  G  ++AT+C ICL EF  GE+VRVLP C+HGFHV CID WL SHSSCPTC
Sbjct: 97  RIPVIIYGVAGIHLIATDCAICLGEFIGGEKVRVLPNCNHGFHVRCIDTWLVSHSSCPTC 156

Query: 180 RQSLLEDGSGPPAANTASQLNTAYR 254
           RQSLLE     PA++ A+++    R
Sbjct: 157 RQSLLEQ----PASSDATEIEVGIR 177


Top