BLASTX nr result
ID: Zingiber25_contig00045283
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00045283
(512 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEE62986.1| hypothetical protein OsJ_17794 [Oryza sativa Japo... 111 1e-22
ref|NP_001055021.1| Os05g0247900 [Oryza sativa Japonica Group] g... 111 1e-22
ref|XP_004982575.1| PREDICTED: putative DNA repair and recombina... 107 2e-21
gb|AFW68339.1| hypothetical protein ZEAMMB73_785836 [Zea mays] 107 2e-21
gb|AFW68338.1| hypothetical protein ZEAMMB73_785836 [Zea mays] 107 2e-21
ref|XP_002464356.1| hypothetical protein SORBIDRAFT_01g016830 [S... 104 1e-20
ref|XP_003562297.1| PREDICTED: putative DNA repair and recombina... 104 1e-20
gb|EXB44640.1| Putative DNA repair and recombination protein RAD... 100 2e-19
ref|XP_006306750.1| hypothetical protein CARUB_v10008286mg [Caps... 99 6e-19
ref|XP_004303097.1| PREDICTED: putative DNA repair and recombina... 99 6e-19
gb|EMJ00128.1| hypothetical protein PRUPE_ppa001197mg [Prunus pe... 99 6e-19
gb|EOX99453.1| Switch 2 [Theobroma cacao] 99 8e-19
ref|XP_002889473.1| predicted protein [Arabidopsis lyrata subsp.... 99 8e-19
ref|XP_006853540.1| hypothetical protein AMTR_s00032p00230880 [A... 96 4e-18
ref|NP_171871.2| protein CHROMATIN REMODELING 9 [Arabidopsis tha... 96 4e-18
ref|XP_006418207.1| hypothetical protein EUTSA_v10006771mg [Eutr... 96 6e-18
ref|XP_002517890.1| conserved hypothetical protein [Ricinus comm... 95 8e-18
ref|XP_006367475.1| PREDICTED: putative DNA repair and recombina... 94 1e-17
ref|XP_004505563.1| PREDICTED: putative DNA repair and recombina... 94 2e-17
ref|XP_003540924.1| PREDICTED: putative DNA repair and recombina... 93 3e-17
>gb|EEE62986.1| hypothetical protein OsJ_17794 [Oryza sativa Japonica Group]
Length = 947
Score = 111 bits (277), Expect = 1e-22
Identities = 67/123 (54%), Positives = 74/123 (60%), Gaps = 6/123 (4%)
Frame = -3
Query: 351 LSQQLQRLDAQSLSEGFQF------RXXXXXXXXXXXXXXXXXESGGVPVTVRLPRDALL 190
LSQQL RLDA S S F R E VP PR A L
Sbjct: 131 LSQQLLRLDASSSSSSFSVSPPPPPRTSPTSDAAADDAPPLPEEEDEVPCI--RPR-ASL 187
Query: 189 SQSASFEARGPYEPLVLSSPGETHVVQVPASINCRLLAHQSDGIRFLYNLYKSNHGGVLG 10
+AS ++RGPYEPL LS PGE VVQVP+SINCRLL HQ DG+RFLYNLY++NHGGVLG
Sbjct: 188 PPAASLDSRGPYEPLALSPPGERPVVQVPSSINCRLLVHQRDGVRFLYNLYRNNHGGVLG 247
Query: 9 DDM 1
DDM
Sbjct: 248 DDM 250
>ref|NP_001055021.1| Os05g0247900 [Oryza sativa Japonica Group]
gi|54291735|gb|AAV32104.1| uknown protein [Oryza sativa
Japonica Group] gi|113578572|dbj|BAF16935.1|
Os05g0247900 [Oryza sativa Japonica Group]
gi|125551533|gb|EAY97242.1| hypothetical protein
OsI_19162 [Oryza sativa Indica Group]
gi|215701224|dbj|BAG92648.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 856
Score = 111 bits (277), Expect = 1e-22
Identities = 67/123 (54%), Positives = 74/123 (60%), Gaps = 6/123 (4%)
Frame = -3
Query: 351 LSQQLQRLDAQSLSEGFQF------RXXXXXXXXXXXXXXXXXESGGVPVTVRLPRDALL 190
LSQQL RLDA S S F R E VP PR A L
Sbjct: 40 LSQQLLRLDASSSSSSFSVSPPPPPRTSPTSDAAADDAPPLPEEEDEVPCI--RPR-ASL 96
Query: 189 SQSASFEARGPYEPLVLSSPGETHVVQVPASINCRLLAHQSDGIRFLYNLYKSNHGGVLG 10
+AS ++RGPYEPL LS PGE VVQVP+SINCRLL HQ DG+RFLYNLY++NHGGVLG
Sbjct: 97 PPAASLDSRGPYEPLALSPPGERPVVQVPSSINCRLLVHQRDGVRFLYNLYRNNHGGVLG 156
Query: 9 DDM 1
DDM
Sbjct: 157 DDM 159
>ref|XP_004982575.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Setaria italica]
Length = 885
Score = 107 bits (267), Expect = 2e-21
Identities = 49/61 (80%), Positives = 55/61 (90%)
Frame = -3
Query: 183 SASFEARGPYEPLVLSSPGETHVVQVPASINCRLLAHQSDGIRFLYNLYKSNHGGVLGDD 4
+A+ E+RGPYEPLVLS PGE VVQVP SINCRLLAHQ DG+RFLYNLY++NHGGVLGDD
Sbjct: 108 AAALESRGPYEPLVLSPPGEHPVVQVPPSINCRLLAHQRDGVRFLYNLYRNNHGGVLGDD 167
Query: 3 M 1
M
Sbjct: 168 M 168
>gb|AFW68339.1| hypothetical protein ZEAMMB73_785836 [Zea mays]
Length = 630
Score = 107 bits (266), Expect = 2e-21
Identities = 49/61 (80%), Positives = 55/61 (90%)
Frame = -3
Query: 183 SASFEARGPYEPLVLSSPGETHVVQVPASINCRLLAHQSDGIRFLYNLYKSNHGGVLGDD 4
+A+ E+RGPYEPLVLS PGE VVQVP SINCRLLAHQ DG+RFLYNLY++NHGGVLGDD
Sbjct: 107 AAALESRGPYEPLVLSLPGEHPVVQVPPSINCRLLAHQRDGVRFLYNLYRNNHGGVLGDD 166
Query: 3 M 1
M
Sbjct: 167 M 167
>gb|AFW68338.1| hypothetical protein ZEAMMB73_785836 [Zea mays]
Length = 687
Score = 107 bits (266), Expect = 2e-21
Identities = 49/61 (80%), Positives = 55/61 (90%)
Frame = -3
Query: 183 SASFEARGPYEPLVLSSPGETHVVQVPASINCRLLAHQSDGIRFLYNLYKSNHGGVLGDD 4
+A+ E+RGPYEPLVLS PGE VVQVP SINCRLLAHQ DG+RFLYNLY++NHGGVLGDD
Sbjct: 107 AAALESRGPYEPLVLSLPGEHPVVQVPPSINCRLLAHQRDGVRFLYNLYRNNHGGVLGDD 166
Query: 3 M 1
M
Sbjct: 167 M 167
>ref|XP_002464356.1| hypothetical protein SORBIDRAFT_01g016830 [Sorghum bicolor]
gi|241918210|gb|EER91354.1| hypothetical protein
SORBIDRAFT_01g016830 [Sorghum bicolor]
Length = 888
Score = 104 bits (260), Expect = 1e-20
Identities = 47/60 (78%), Positives = 54/60 (90%)
Frame = -3
Query: 180 ASFEARGPYEPLVLSSPGETHVVQVPASINCRLLAHQSDGIRFLYNLYKSNHGGVLGDDM 1
A+ E+RGP+EPLVLS PGE VVQVP SINCRLLAHQ DG+RFLYNLY++NHGG+LGDDM
Sbjct: 111 AALESRGPFEPLVLSLPGEHPVVQVPPSINCRLLAHQRDGVRFLYNLYRNNHGGILGDDM 170
>ref|XP_003562297.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Brachypodium distachyon]
Length = 851
Score = 104 bits (259), Expect = 1e-20
Identities = 48/61 (78%), Positives = 54/61 (88%)
Frame = -3
Query: 183 SASFEARGPYEPLVLSSPGETHVVQVPASINCRLLAHQSDGIRFLYNLYKSNHGGVLGDD 4
++S E+RGPYEPLVLS PGE VVQVP SINCRLLAHQ G+RFLYNLY++NHGGVLGDD
Sbjct: 95 ASSLESRGPYEPLVLSQPGEHPVVQVPPSINCRLLAHQRVGVRFLYNLYRNNHGGVLGDD 154
Query: 3 M 1
M
Sbjct: 155 M 155
>gb|EXB44640.1| Putative DNA repair and recombination protein RAD26-like protein
[Morus notabilis]
Length = 897
Score = 100 bits (250), Expect = 2e-19
Identities = 44/58 (75%), Positives = 51/58 (87%)
Frame = -3
Query: 174 FEARGPYEPLVLSSPGETHVVQVPASINCRLLAHQSDGIRFLYNLYKSNHGGVLGDDM 1
F+ GPYEPLVLSS GE HVVQVP+SINCRLL HQ +G++FLY LYK+NHGG+LGDDM
Sbjct: 111 FDQTGPYEPLVLSSQGEIHVVQVPSSINCRLLEHQREGVKFLYGLYKNNHGGILGDDM 168
>ref|XP_006306750.1| hypothetical protein CARUB_v10008286mg [Capsella rubella]
gi|482575461|gb|EOA39648.1| hypothetical protein
CARUB_v10008286mg [Capsella rubella]
Length = 860
Score = 99.0 bits (245), Expect = 6e-19
Identities = 44/60 (73%), Positives = 52/60 (86%)
Frame = -3
Query: 180 ASFEARGPYEPLVLSSPGETHVVQVPASINCRLLAHQSDGIRFLYNLYKSNHGGVLGDDM 1
A F+ GPYEPLVLSS GE +++VPASINCRLL HQ +GI+FLYNLYK+NHGG+LGDDM
Sbjct: 108 AEFDYTGPYEPLVLSSIGEIPIIKVPASINCRLLEHQREGIKFLYNLYKNNHGGILGDDM 167
>ref|XP_004303097.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Fragaria vesca subsp. vesca]
Length = 862
Score = 99.0 bits (245), Expect = 6e-19
Identities = 43/58 (74%), Positives = 51/58 (87%)
Frame = -3
Query: 174 FEARGPYEPLVLSSPGETHVVQVPASINCRLLAHQSDGIRFLYNLYKSNHGGVLGDDM 1
F+ GPYEPL+LSSPGE V+QVPASINCRLL HQ +G++FLY +YK+NHGGVLGDDM
Sbjct: 83 FDNTGPYEPLLLSSPGELPVIQVPASINCRLLLHQREGVKFLYRIYKNNHGGVLGDDM 140
>gb|EMJ00128.1| hypothetical protein PRUPE_ppa001197mg [Prunus persica]
Length = 884
Score = 99.0 bits (245), Expect = 6e-19
Identities = 44/58 (75%), Positives = 51/58 (87%)
Frame = -3
Query: 174 FEARGPYEPLVLSSPGETHVVQVPASINCRLLAHQSDGIRFLYNLYKSNHGGVLGDDM 1
F+ GPYEPLVLSS GE V+QVPASINCRLL HQ +G++FLYNLYK+NHGG+LGDDM
Sbjct: 105 FDRIGPYEPLVLSSEGEFPVIQVPASINCRLLEHQREGVKFLYNLYKNNHGGILGDDM 162
>gb|EOX99453.1| Switch 2 [Theobroma cacao]
Length = 886
Score = 98.6 bits (244), Expect = 8e-19
Identities = 46/58 (79%), Positives = 51/58 (87%)
Frame = -3
Query: 174 FEARGPYEPLVLSSPGETHVVQVPASINCRLLAHQSDGIRFLYNLYKSNHGGVLGDDM 1
FE GPYEPLVLSS GE VVQVPASINCRLLAHQ +G++FL+ LYK+NHGGVLGDDM
Sbjct: 115 FEDTGPYEPLVLSSDGEFPVVQVPASINCRLLAHQREGVKFLFMLYKNNHGGVLGDDM 172
>ref|XP_002889473.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335315|gb|EFH65732.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 876
Score = 98.6 bits (244), Expect = 8e-19
Identities = 42/60 (70%), Positives = 52/60 (86%)
Frame = -3
Query: 180 ASFEARGPYEPLVLSSPGETHVVQVPASINCRLLAHQSDGIRFLYNLYKSNHGGVLGDDM 1
A F+ GPYEPL+LSS GE ++QVPASINCRLL HQ +G++F+YNLYK+NHGG+LGDDM
Sbjct: 108 AEFDYSGPYEPLLLSSMGEIPIIQVPASINCRLLEHQREGVKFMYNLYKNNHGGILGDDM 167
>ref|XP_006853540.1| hypothetical protein AMTR_s00032p00230880 [Amborella trichopoda]
gi|548857193|gb|ERN15007.1| hypothetical protein
AMTR_s00032p00230880 [Amborella trichopoda]
Length = 827
Score = 96.3 bits (238), Expect = 4e-18
Identities = 42/57 (73%), Positives = 51/57 (89%)
Frame = -3
Query: 171 EARGPYEPLVLSSPGETHVVQVPASINCRLLAHQSDGIRFLYNLYKSNHGGVLGDDM 1
E +G +EPL+LSSPG++ VVQVPASINCRLL HQ +G+RFLY LYK+NHGG+LGDDM
Sbjct: 95 ETQGIFEPLILSSPGDSPVVQVPASINCRLLEHQREGVRFLYGLYKNNHGGILGDDM 151
>ref|NP_171871.2| protein CHROMATIN REMODELING 9 [Arabidopsis thaliana]
gi|332189485|gb|AEE27606.1| switch 2 [Arabidopsis
thaliana]
Length = 862
Score = 96.3 bits (238), Expect = 4e-18
Identities = 41/60 (68%), Positives = 51/60 (85%)
Frame = -3
Query: 180 ASFEARGPYEPLVLSSPGETHVVQVPASINCRLLAHQSDGIRFLYNLYKSNHGGVLGDDM 1
A F+ GPYEPL+LSS GE ++ VPASINCRLL HQ +G++F+YNLYK+NHGG+LGDDM
Sbjct: 107 AEFDYSGPYEPLMLSSIGEIPIIHVPASINCRLLEHQREGVKFMYNLYKNNHGGILGDDM 166
>ref|XP_006418207.1| hypothetical protein EUTSA_v10006771mg [Eutrema salsugineum]
gi|557095978|gb|ESQ36560.1| hypothetical protein
EUTSA_v10006771mg [Eutrema salsugineum]
Length = 864
Score = 95.5 bits (236), Expect = 6e-18
Identities = 42/60 (70%), Positives = 52/60 (86%)
Frame = -3
Query: 180 ASFEARGPYEPLVLSSPGETHVVQVPASINCRLLAHQSDGIRFLYNLYKSNHGGVLGDDM 1
A F+ GPYEPLVLSS GE ++QVPASINCRLL +Q +G++FLYNLYK+N+GG+LGDDM
Sbjct: 109 AEFDYTGPYEPLVLSSIGEIPIIQVPASINCRLLEYQREGVKFLYNLYKNNYGGILGDDM 168
>ref|XP_002517890.1| conserved hypothetical protein [Ricinus communis]
gi|223542872|gb|EEF44408.1| conserved hypothetical
protein [Ricinus communis]
Length = 870
Score = 95.1 bits (235), Expect = 8e-18
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = -3
Query: 174 FEARGPYEPLVLSSPGETHVVQVPASINCRLLAHQSDGIRFLYNLYKSNHGGVLGDDM 1
F+ GP+EPL+LS PGE +VQVPASINCRLL HQ +G++FLY LY++NHGGVLGDDM
Sbjct: 115 FDHTGPFEPLLLSLPGEVPIVQVPASINCRLLEHQREGVKFLYKLYRNNHGGVLGDDM 172
>ref|XP_006367475.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Solanum tuberosum]
Length = 888
Score = 94.4 bits (233), Expect = 1e-17
Identities = 43/61 (70%), Positives = 51/61 (83%)
Frame = -3
Query: 183 SASFEARGPYEPLVLSSPGETHVVQVPASINCRLLAHQSDGIRFLYNLYKSNHGGVLGDD 4
S + GPYEPLVLSS GE +VQVPASINCRLL HQ +G++FLY+LY++NHGGVLGDD
Sbjct: 102 SLLLDQAGPYEPLVLSSLGEKSLVQVPASINCRLLEHQREGVKFLYSLYRNNHGGVLGDD 161
Query: 3 M 1
M
Sbjct: 162 M 162
>ref|XP_004505563.1| PREDICTED: putative DNA repair and recombination protein
RAD26-like, partial [Cicer arietinum]
Length = 911
Score = 94.0 bits (232), Expect = 2e-17
Identities = 43/63 (68%), Positives = 51/63 (80%)
Frame = -3
Query: 189 SQSASFEARGPYEPLVLSSPGETHVVQVPASINCRLLAHQSDGIRFLYNLYKSNHGGVLG 10
S FE GP+EPL+LSS GE +VQVPASINCRLL HQ G++FLY+LYK+NHGG+LG
Sbjct: 133 SSQFQFEHTGPFEPLLLSSHGELPLVQVPASINCRLLEHQRVGVKFLYDLYKNNHGGILG 192
Query: 9 DDM 1
DDM
Sbjct: 193 DDM 195
>ref|XP_003540924.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Glycine max]
Length = 870
Score = 93.2 bits (230), Expect = 3e-17
Identities = 42/58 (72%), Positives = 49/58 (84%)
Frame = -3
Query: 174 FEARGPYEPLVLSSPGETHVVQVPASINCRLLAHQSDGIRFLYNLYKSNHGGVLGDDM 1
F+ GP+EPL+LSS GE VQVPASINCRLL HQ +G+RFLY LYK+NHGG+LGDDM
Sbjct: 101 FDHTGPFEPLLLSSHGEFPPVQVPASINCRLLEHQREGVRFLYGLYKNNHGGILGDDM 158