BLASTX nr result

ID: Zingiber25_contig00045252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00045252
         (410 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006649734.1| PREDICTED: LOB domain-containing protein 18-...    50   3e-06

>ref|XP_006649734.1| PREDICTED: LOB domain-containing protein 18-like [Oryza
           brachyantha]
          Length = 265

 Score = 50.1 bits (118), Expect(2) = 3e-06
 Identities = 33/68 (48%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
 Frame = -2

Query: 406 IFALQQQVGNLQAELAYLQAHXXXXXXXXXXXXXXXXXXXXXXXAFSVLDLQSS---PGM 236
           IFALQQQV NLQAEL YLQAH                        FS+ DL SS   P  
Sbjct: 116 IFALQQQVVNLQAELTYLQAHLATLELPSPPPLMPAPPQMPMPAPFSISDLPSSTSVPTT 175

Query: 235 ADLSALFD 212
            DLSALFD
Sbjct: 176 VDLSALFD 183



 Score = 26.6 bits (57), Expect(2) = 3e-06
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = -3

Query: 171 AASRNFSESSGGGGSDLQ 118
           AAS   +ESSGGGG DLQ
Sbjct: 220 AASGMPAESSGGGGGDLQ 237


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