BLASTX nr result

ID: Zingiber25_contig00045222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00045222
         (461 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006303911.1| hypothetical protein CARUB_v10008388mg [Caps...    58   1e-06
ref|XP_006418204.1| hypothetical protein EUTSA_v10006864mg [Eutr...    57   2e-06

>ref|XP_006303911.1| hypothetical protein CARUB_v10008388mg [Capsella rubella]
           gi|482572622|gb|EOA36809.1| hypothetical protein
           CARUB_v10008388mg [Capsella rubella]
          Length = 757

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 45/134 (33%), Positives = 67/134 (50%), Gaps = 4/134 (2%)
 Frame = -2

Query: 394 DASPVAEAPEVCNSKAHSSEKVAESSIVKNNDSVESCTPRIQKMPVKEVAPGSSKNL--- 224
           D+S VAE     N+K   +       I    +   +CTP   K P++    G S +L   
Sbjct: 112 DSSKVAEV----NNKTADASNATTEQIEDKENIPPACTP---KPPLQFSQGGKSMDLKKQ 164

Query: 223 -TARKIAFFIQQTCASNPKTKPLTHSSKVNNVKNSTKFSSGLVANNFLANEVSEESQAVK 47
            TARKIA  ++   A  PK +     +K ++ K+  + +S  V N      + +E+QA+K
Sbjct: 165 QTARKIASLLKNPSALRPKNQSQLSQAKGSHQKSVKRETS--VRNMVSTTNLIQENQAIK 222

Query: 46  RQKLDYGKARQIHN 5
           RQKLD GK+RQI N
Sbjct: 223 RQKLDDGKSRQILN 236


>ref|XP_006418204.1| hypothetical protein EUTSA_v10006864mg [Eutrema salsugineum]
           gi|557095975|gb|ESQ36557.1| hypothetical protein
           EUTSA_v10006864mg [Eutrema salsugineum]
          Length = 776

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 17/149 (11%)
 Frame = -2

Query: 400 PLDASPVAEAPEVCNSKAHSSEKVAESSIVKNNDS-------------VESCTPRIQKMP 260
           P++AS +          +H++ K  ++SI+K+  +              E+CTP   K P
Sbjct: 120 PIEASKI--------KPSHNNSKDVDASILKDKTTEQIENKENIPPPNTEACTP---KPP 168

Query: 259 VKEVAPGSSKNL----TARKIAFFIQQTCASNPKTKPLTHSSKVNNVKNSTKFSSGLVAN 92
           ++    G S +L    TARKIA  ++   A  PK +  +  SK  + K+  + +S  V N
Sbjct: 169 LQLSQGGKSMDLKKQQTARKIASLLRNPSALRPKHQSQSSQSKGTHQKSVKRETS--VKN 226

Query: 91  NFLANEVSEESQAVKRQKLDYGKARQIHN 5
                 + +E+QA+KRQKLD GK+RQI N
Sbjct: 227 IAATTNLIQENQAIKRQKLDDGKSRQILN 255


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