BLASTX nr result

ID: Zingiber25_contig00045217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00045217
         (407 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER45360.1| P2 [Fig badnavirus 1]                                   55   1e-05
gb|AER45350.1| P2 [Fig badnavirus 1] gi|354990611|gb|AER45354.1|...    55   1e-05
gb|AER42637.1| DNA-binding protein [Fig badnavirus 1] gi|3548322...    55   1e-05

>gb|AER45360.1| P2 [Fig badnavirus 1]
          Length = 135

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/90 (37%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
 Frame = -2

Query: 358 KVLIKQNNTLISLLVNLTLQVQELQEEIRRISTIKPRTSSKELEESIS-DLTRRIGRLNL 182
           +V IKQNNTLI LL+ +   +++++EE +R+   + R   K+   SI+ +L  R+  L+L
Sbjct: 44  RVQIKQNNTLIQLLIQIAESLKDIREE-QRVLKEEVRQLQKDKAASITEELVERLQSLSL 102

Query: 181 GT-DPIIPKKKGSILVFKNPTEILKNEARK 95
           G  +  + +KKG+  VFK+P  IL+ E  K
Sbjct: 103 GVPEKKVAEKKGTFRVFKDPLRILEEEKEK 132


>gb|AER45350.1| P2 [Fig badnavirus 1] gi|354990611|gb|AER45354.1| P2 [Fig
           badnavirus 1]
          Length = 135

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/90 (37%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
 Frame = -2

Query: 358 KVLIKQNNTLISLLVNLTLQVQELQEEIRRISTIKPRTSSKELEESIS-DLTRRIGRLNL 182
           +V IKQNNTLI LL+ +   +++++EE +R+   + R   K+   SI+ +L  R+  L+L
Sbjct: 44  RVQIKQNNTLIQLLIQIAESLKDIREE-QRVLKEEVRQLQKDKAASITEELVERLQSLSL 102

Query: 181 GT-DPIIPKKKGSILVFKNPTEILKNEARK 95
           G  +  + +KKG+  VFK+P  IL+ E  K
Sbjct: 103 GVPEKKVAEKKGTFRVFKDPLRILEEEKEK 132


>gb|AER42637.1| DNA-binding protein [Fig badnavirus 1] gi|354832281|gb|AER42639.1|
           DNA-binding protein [Fig badnavirus 1]
           gi|354832284|gb|AER42641.1| DNA-binding protein [Fig
           badnavirus 1] gi|354832287|gb|AER42643.1| DNA-binding
           protein [Fig badnavirus 1] gi|354832290|gb|AER42645.1|
           DNA-binding protein [Fig badnavirus 1]
           gi|354990563|gb|AER45322.1| P2 [Fig badnavirus 1]
           gi|354990566|gb|AER45324.1| P2 [Fig badnavirus 1]
           gi|354990569|gb|AER45326.1| P2 [Fig badnavirus 1]
           gi|354990572|gb|AER45328.1| P2 [Fig badnavirus 1]
           gi|354990575|gb|AER45330.1| P2 [Fig badnavirus 1]
           gi|354990578|gb|AER45332.1| P2 [Fig badnavirus 1]
           gi|354990581|gb|AER45334.1| P2 [Fig badnavirus 1]
           gi|354990584|gb|AER45336.1| P2 [Fig badnavirus 1]
           gi|354990587|gb|AER45338.1| P2 [Fig badnavirus 1]
           gi|354990590|gb|AER45340.1| P2 [Fig badnavirus 1]
           gi|354990593|gb|AER45342.1| P2 [Fig badnavirus 1]
           gi|354990599|gb|AER45346.1| P2 [Fig badnavirus 1]
           gi|354990602|gb|AER45348.1| P2 [Fig badnavirus 1]
           gi|354990608|gb|AER45352.1| P2 [Fig badnavirus 1]
           gi|354990614|gb|AER45356.1| P2 [Fig badnavirus 1]
           gi|354990617|gb|AER45358.1| P2 [Fig badnavirus 1]
           gi|354990623|gb|AER45362.1| P2 [Fig badnavirus 1]
           gi|354990626|gb|AER45364.1| P2 [Fig badnavirus 1]
           gi|354990629|gb|AER45366.1| P2 [Fig badnavirus 1]
           gi|354990632|gb|AER45368.1| P2 [Fig badnavirus 1]
           gi|354990635|gb|AER45370.1| P2 [Fig badnavirus 1]
           gi|354990638|gb|AER45372.1| P2 [Fig badnavirus 1]
           gi|354990641|gb|AER45374.1| P2 [Fig badnavirus 1]
           gi|381144387|gb|AFF58896.1| putative DNA-binding protein
           [Fig badnavirus 1] gi|381144390|gb|AFF58898.1| putative
           DNA-binding protein [Fig badnavirus 1]
           gi|381144393|gb|AFF58900.1| putative DNA-binding protein
           [Fig badnavirus 1] gi|381144396|gb|AFF58902.1| putative
           DNA-binding protein [Fig badnavirus 1]
           gi|381144408|gb|AFF58910.1| putative DNA-binding protein
           [Fig badnavirus 1] gi|381144411|gb|AFF58912.1| putative
           DNA-binding protein [Fig badnavirus 1]
           gi|381144414|gb|AFF58914.1| putative DNA-binding protein
           [Fig badnavirus 1] gi|381144417|gb|AFF58916.1| putative
           DNA-binding protein [Fig badnavirus 1]
          Length = 135

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/90 (37%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
 Frame = -2

Query: 358 KVLIKQNNTLISLLVNLTLQVQELQEEIRRISTIKPRTSSKELEESIS-DLTRRIGRLNL 182
           +V IKQNNTLI LL+ +   +++++EE +R+   + R   K+   SI+ +L  R+  L+L
Sbjct: 44  RVQIKQNNTLIQLLIQIAESLKDIREE-QRVLKEEVRQLQKDKAASITEELVERLQSLSL 102

Query: 181 GT-DPIIPKKKGSILVFKNPTEILKNEARK 95
           G  +  + +KKG+  VFK+P  IL+ E  K
Sbjct: 103 GVPEKKVAEKKGTFRVFKDPLRILEEEKEK 132


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