BLASTX nr result
ID: Zingiber25_contig00045213
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00045213
(335 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004251624.1| PREDICTED: E3 ubiquitin-protein ligase ATL42... 70 2e-10
ref|XP_006353480.1| PREDICTED: E3 ubiquitin-protein ligase ATL42... 68 1e-09
gb|EOY30701.1| RING/U-box superfamily protein, putative [Theobro... 67 2e-09
ref|NP_001056520.1| Os05g0596500 [Oryza sativa Japonica Group] g... 67 2e-09
ref|XP_004287451.1| PREDICTED: E3 ubiquitin-protein ligase ATL42... 67 3e-09
ref|XP_006655665.1| PREDICTED: E3 ubiquitin-protein ligase ATL42... 66 5e-09
ref|XP_002325015.2| hypothetical protein POPTR_0018s09200g [Popu... 65 7e-09
ref|XP_006494326.1| PREDICTED: E3 ubiquitin-protein ligase ATL42... 65 9e-09
ref|XP_006451246.1| hypothetical protein CICLE_v10010254mg [Citr... 65 9e-09
ref|XP_006338153.1| PREDICTED: E3 ubiquitin-protein ligase ATL42... 65 1e-08
gb|EMJ26276.1| hypothetical protein PRUPE_ppa017787mg, partial [... 63 4e-08
ref|XP_004960965.1| PREDICTED: E3 ubiquitin-protein ligase ATL42... 63 5e-08
emb|CBI28025.3| unnamed protein product [Vitis vinifera] 63 5e-08
ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42... 63 5e-08
ref|XP_004151734.1| PREDICTED: E3 ubiquitin-protein ligase ATL42... 62 8e-08
ref|XP_004513025.1| PREDICTED: E3 ubiquitin-protein ligase ATL42... 62 1e-07
gb|AFW79430.1| putative RING zinc finger domain superfamily prot... 62 1e-07
ref|XP_003517066.1| PREDICTED: E3 ubiquitin-protein ligase ATL42... 61 1e-07
ref|XP_003620577.1| RING finger family protein [Medicago truncat... 61 1e-07
gb|ESW24890.1| hypothetical protein PHAVU_004G169200g [Phaseolus... 60 3e-07
>ref|XP_004251624.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Solanum
lycopersicum]
Length = 421
Score = 70.5 bits (171), Expect = 2e-10
Identities = 39/84 (46%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Frame = +3
Query: 93 DVSFRPGFTVVFGIFATMFALILLMLFCAKFCHRGLLTLEPSLAAD-DR-SILPLLQ-PS 263
+ +FRP VV GI + MF+L L+L AKFC R L L ++ D DR + LP+ + S
Sbjct: 85 EANFRPSIAVVIGILSIMFSLTFLLLLYAKFCRRSSLPLHNAMQMDQDRLTTLPMARVSS 144
Query: 264 GIEKVAVDSLPFFRFDSLRGGRAG 335
GI+K ++SLPFFRF L+G R G
Sbjct: 145 GIDKTIIESLPFFRFSLLKGSRQG 168
>ref|XP_006353480.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Solanum
tuberosum]
Length = 370
Score = 67.8 bits (164), Expect = 1e-09
Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Frame = +3
Query: 84 QEADVSFRPGFTVVFGIFATMFALILLMLFCAKFCHRGLLTLEPSLAADDRSI--LPLLQ 257
Q+ +FRP VV GI + MF+L L+L AKFC R L ++ D + LP+ +
Sbjct: 43 QDEANNFRPSIAVVIGILSIMFSLTFLLLLYAKFCRRSPQALHNAMQIDQDGLTTLPMAR 102
Query: 258 -PSGIEKVAVDSLPFFRFDSLRGGRAG 335
SGI+K ++SLPFFRF L+G R G
Sbjct: 103 VSSGIDKTIIESLPFFRFSLLKGSRQG 129
>gb|EOY30701.1| RING/U-box superfamily protein, putative [Theobroma cacao]
Length = 426
Score = 67.4 bits (163), Expect = 2e-09
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Frame = +3
Query: 87 EADVSFRPGFTVVFGIFATMFALILLMLFCAKFCHRGLLT---LEPSLAADDRSILPLLQ 257
+A +FRP VV G+ MF+L L +L AKFCHRG P + RS Q
Sbjct: 33 DAVSNFRPSLAVVIGVLCVMFSLTLFLLVYAKFCHRGATVHGDRHPGILHRTRS-----Q 87
Query: 258 PSGIEKVAVDSLPFFRFDSLRGGRAG 335
SGI+K ++SLPFF+F SL+G + G
Sbjct: 88 FSGIDKKVIESLPFFKFSSLKGSKQG 113
>ref|NP_001056520.1| Os05g0596500 [Oryza sativa Japonica Group]
gi|55733884|gb|AAV59391.1| unknown protein [Oryza sativa
Japonica Group] gi|57900673|gb|AAW57798.1| unknown
protein [Oryza sativa Japonica Group]
gi|113580071|dbj|BAF18434.1| Os05g0596500 [Oryza sativa
Japonica Group] gi|215697912|dbj|BAG92154.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222632790|gb|EEE64922.1| hypothetical protein
OsJ_19782 [Oryza sativa Japonica Group]
Length = 385
Score = 67.0 bits (162), Expect = 2e-09
Identities = 38/86 (44%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Frame = +3
Query: 96 VSFRPGFTVVFGIFATMFALILLMLFCAKFCHRG------LLTLEPSLAADDRSILPLLQ 257
VSFRP +V GIF +F+L L+L AKFCH T+ P+ AADD
Sbjct: 46 VSFRPSVAIVVGIFTMIFSLTFLLLMYAKFCHPSSPVAAPAPTVVPAAAADD-------- 97
Query: 258 PSGIEKVAVDSLPFFRFDSLRGGRAG 335
G+ K ++SLPFFRF +LRG R G
Sbjct: 98 --GVAKPVIESLPFFRFAALRGARQG 121
>ref|XP_004287451.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Fragaria vesca
subsp. vesca]
Length = 434
Score = 66.6 bits (161), Expect = 3e-09
Identities = 34/83 (40%), Positives = 49/83 (59%)
Frame = +3
Query: 87 EADVSFRPGFTVVFGIFATMFALILLMLFCAKFCHRGLLTLEPSLAADDRSILPLLQPSG 266
E +F+P VV GI A MFAL ++L AKFCHR + + + R I + SG
Sbjct: 44 ETQSNFQPSVAVVIGILAIMFALTFVLLVYAKFCHRRISAHGNNHHLEGRRIGTSSRFSG 103
Query: 267 IEKVAVDSLPFFRFDSLRGGRAG 335
I+K +++LPFFRF +L+G + G
Sbjct: 104 IDKTVIEALPFFRFSTLKGSKEG 126
>ref|XP_006655665.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Oryza
brachyantha]
Length = 410
Score = 65.9 bits (159), Expect = 5e-09
Identities = 35/80 (43%), Positives = 44/80 (55%)
Frame = +3
Query: 96 VSFRPGFTVVFGIFATMFALILLMLFCAKFCHRGLLTLEPSLAADDRSILPLLQPSGIEK 275
VSFRP +V GIF +F+L L+L AKFCH + P A P G+ K
Sbjct: 48 VSFRPSVAIVVGIFTMIFSLTFLLLMYAKFCHP---SPSPGAAPTPTPAPAPAAPDGVAK 104
Query: 276 VAVDSLPFFRFDSLRGGRAG 335
++SLPFFRF +LRG R G
Sbjct: 105 PVIESLPFFRFAALRGARQG 124
>ref|XP_002325015.2| hypothetical protein POPTR_0018s09200g [Populus trichocarpa]
gi|550318374|gb|EEF03580.2| hypothetical protein
POPTR_0018s09200g [Populus trichocarpa]
Length = 427
Score = 65.5 bits (158), Expect = 7e-09
Identities = 38/89 (42%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Frame = +3
Query: 84 QEADVSFRPGFTVVFGIFATMFALILLMLFCAKFCHRGLLT-----LEPSLAADDRSILP 248
Q+A +FRP VV GI +F+L ++L AKFCHRG L P+L
Sbjct: 32 QDAVSNFRPSLAVVIGILFLIFSLTFILLIYAKFCHRGGLVHGGSENGPALTRSASRF-- 89
Query: 249 LLQPSGIEKVAVDSLPFFRFDSLRGGRAG 335
SGI+K ++SLPFFRF SL+G R G
Sbjct: 90 ----SGIDKTVIESLPFFRFTSLKGSREG 114
>ref|XP_006494326.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Citrus sinensis]
Length = 428
Score = 65.1 bits (157), Expect = 9e-09
Identities = 32/79 (40%), Positives = 44/79 (55%)
Frame = +3
Query: 99 SFRPGFTVVFGIFATMFALILLMLFCAKFCHRGLLTLEPSLAADDRSILPLLQPSGIEKV 278
+F+P VV GI MF L ++L AKFCHR + + I + SGI+K
Sbjct: 35 NFKPSLAVVIGILCVMFILTFILLLYAKFCHRASSLFANTQIHNPALIRSTSRFSGIDKA 94
Query: 279 AVDSLPFFRFDSLRGGRAG 335
++SLPFFRF SL+G + G
Sbjct: 95 VIESLPFFRFSSLKGSKQG 113
>ref|XP_006451246.1| hypothetical protein CICLE_v10010254mg [Citrus clementina]
gi|557554472|gb|ESR64486.1| hypothetical protein
CICLE_v10010254mg [Citrus clementina]
Length = 415
Score = 65.1 bits (157), Expect = 9e-09
Identities = 32/79 (40%), Positives = 44/79 (55%)
Frame = +3
Query: 99 SFRPGFTVVFGIFATMFALILLMLFCAKFCHRGLLTLEPSLAADDRSILPLLQPSGIEKV 278
+F+P VV GI MF L ++L AKFCHR + + I + SGI+K
Sbjct: 22 NFKPSLAVVIGILCVMFILTFILLLYAKFCHRASSLFANTQIHNPALIRSTSRFSGIDKA 81
Query: 279 AVDSLPFFRFDSLRGGRAG 335
++SLPFFRF SL+G + G
Sbjct: 82 VIESLPFFRFSSLKGSKQG 100
>ref|XP_006338153.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like isoform X1
[Solanum tuberosum]
Length = 350
Score = 64.7 bits (156), Expect = 1e-08
Identities = 34/84 (40%), Positives = 46/84 (54%)
Frame = +3
Query: 84 QEADVSFRPGFTVVFGIFATMFALILLMLFCAKFCHRGLLTLEPSLAADDRSILPLLQPS 263
Q+ SF+P VV G+ MF+L +L AKFCH T + D + + + S
Sbjct: 26 QDVVSSFQPSLAVVIGVLFIMFSLTFFLLLYAKFCH----TASSHIQNDGGLVRSVSRSS 81
Query: 264 GIEKVAVDSLPFFRFDSLRGGRAG 335
GI+K V+SLPFFRF LRG + G
Sbjct: 82 GIDKTVVESLPFFRFSLLRGSKQG 105
>gb|EMJ26276.1| hypothetical protein PRUPE_ppa017787mg, partial [Prunus persica]
Length = 418
Score = 63.2 bits (152), Expect = 4e-08
Identities = 32/79 (40%), Positives = 45/79 (56%)
Frame = +3
Query: 99 SFRPGFTVVFGIFATMFALILLMLFCAKFCHRGLLTLEPSLAADDRSILPLLQPSGIEKV 278
SFRP ++ G+ T+F++ L+L AK C RG L + A S + SGI++
Sbjct: 35 SFRPSIAIIVGVLTTLFSITFLLLLYAKHCKRGALVVATGNANSGPSGSTQRKNSGIDRS 94
Query: 279 AVDSLPFFRFDSLRGGRAG 335
V+SLP FRF SLRG + G
Sbjct: 95 VVESLPVFRFGSLRGQKEG 113
>ref|XP_004960965.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like, partial [Setaria
italica]
Length = 421
Score = 62.8 bits (151), Expect = 5e-08
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Frame = +3
Query: 96 VSFRPGFTVVFGIFATMFALILLMLFCAKFCH--------RGLLTLEPSLAADDRSILPL 251
VSFRP +V GIF +F+L L+L AKFCH + T + A +D + L
Sbjct: 46 VSFRPSVAIVVGIFTMIFSLTFLLLMYAKFCHPSSSSPLPAAIPTAAAAAAGNDAAAAAL 105
Query: 252 L-QPSGIEKVAVDSLPFFRFDSLRGGRAG 335
+G+ K +++LPFFRF +LRG R G
Sbjct: 106 APAQAGVPKPVIEALPFFRFAALRGARQG 134
>emb|CBI28025.3| unnamed protein product [Vitis vinifera]
Length = 413
Score = 62.8 bits (151), Expect = 5e-08
Identities = 35/84 (41%), Positives = 47/84 (55%)
Frame = +3
Query: 84 QEADVSFRPGFTVVFGIFATMFALILLMLFCAKFCHRGLLTLEPSLAADDRSILPLLQPS 263
Q+A +F+P VV GI A MF L ++L AK CHR + + RS S
Sbjct: 79 QDAVTAFKPSLAVVIGILAVMFLLTFILLVYAKLCHRASNSDRENQQGLTRSESRF---S 135
Query: 264 GIEKVAVDSLPFFRFDSLRGGRAG 335
GI+K ++SLPFFRF SL+G + G
Sbjct: 136 GIDKTVIESLPFFRFCSLKGSKEG 159
>ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42 [Vitis vinifera]
Length = 423
Score = 62.8 bits (151), Expect = 5e-08
Identities = 35/84 (41%), Positives = 47/84 (55%)
Frame = +3
Query: 84 QEADVSFRPGFTVVFGIFATMFALILLMLFCAKFCHRGLLTLEPSLAADDRSILPLLQPS 263
Q+A +F+P VV GI A MF L ++L AK CHR + + RS S
Sbjct: 33 QDAVTAFKPSLAVVIGILAVMFLLTFILLVYAKLCHRASNSDRENQQGLTRSESRF---S 89
Query: 264 GIEKVAVDSLPFFRFDSLRGGRAG 335
GI+K ++SLPFFRF SL+G + G
Sbjct: 90 GIDKTVIESLPFFRFCSLKGSKEG 113
>ref|XP_004151734.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Cucumis sativus]
gi|449531894|ref|XP_004172920.1| PREDICTED: E3
ubiquitin-protein ligase ATL42-like [Cucumis sativus]
Length = 412
Score = 62.0 bits (149), Expect = 8e-08
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Frame = +3
Query: 84 QEADVS-FRPGFTVVFGIFATMFALILLMLFCAKFCHRGLLTLEPSLAADD----RSILP 248
Q+A+ S F+P V GI MF L ++L AKFCHR S++ DD R I
Sbjct: 4 QDAENSAFQPSLGFVIGILGVMFLLTFILLVYAKFCHR-----RASISVDDVNHPRQIRS 58
Query: 249 LLQPSGIEKVAVDSLPFFRFDSLRGGRAG 335
+ SGI+K ++SLPFFRF +L+G + G
Sbjct: 59 SPRFSGIDKTVIESLPFFRFSTLKGTKEG 87
>ref|XP_004513025.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like isoform X1 [Cicer
arietinum] gi|502164033|ref|XP_004513026.1| PREDICTED:
E3 ubiquitin-protein ligase ATL42-like isoform X2 [Cicer
arietinum]
Length = 424
Score = 61.6 bits (148), Expect = 1e-07
Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Frame = +3
Query: 99 SFRPGFTVVFGIFATMFALILLMLFCAKFCHRGLLTL---EPSLAADDRSILPLLQPSGI 269
+F+P VV GI MFAL ++L AK CH L P+ RS SGI
Sbjct: 35 NFQPSLVVVIGILGLMFALTFVLLIFAKVCHMNPLASTNNHPTTLMRSRSRF-----SGI 89
Query: 270 EKVAVDSLPFFRFDSLRGGRAG 335
+K A++SLPFFRF SL+G + G
Sbjct: 90 DKTAIESLPFFRFSSLKGSKEG 111
>gb|AFW79430.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 391
Score = 61.6 bits (148), Expect = 1e-07
Identities = 33/80 (41%), Positives = 47/80 (58%)
Frame = +3
Query: 96 VSFRPGFTVVFGIFATMFALILLMLFCAKFCHRGLLTLEPSLAADDRSILPLLQPSGIEK 275
V FRP +V GIF +F+L L+L AKFCH + P A+++ + + G+ K
Sbjct: 47 VPFRPRVAIVVGIFTMIFSLTFLLLMYAKFCHPSSSSSPPQPASNNGAAAAAV-CVGLPK 105
Query: 276 VAVDSLPFFRFDSLRGGRAG 335
++SLPFFRF +LRG R G
Sbjct: 106 QVIESLPFFRFATLRGARHG 125
>ref|XP_003517066.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Glycine max]
Length = 426
Score = 61.2 bits (147), Expect = 1e-07
Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Frame = +3
Query: 87 EADVSFRPGFTVVFGIFATMFALILLMLFCAKFCHRGLLTLEPSLAADDRSILPLLQP-- 260
+A +F+P VV GI MF L +L AKFC R S D + LP ++
Sbjct: 29 DAVSNFQPSLAVVIGILGVMFLLTFFLLMYAKFCQR----CASSPVGDTENQLPFVRSRS 84
Query: 261 --SGIEKVAVDSLPFFRFDSLRGGRAG 335
SGI+K ++SLPFFRF SL+G + G
Sbjct: 85 RFSGIDKNVIESLPFFRFSSLKGSKEG 111
>ref|XP_003620577.1| RING finger family protein [Medicago truncatula]
gi|355495592|gb|AES76795.1| RING finger family protein
[Medicago truncatula]
Length = 362
Score = 61.2 bits (147), Expect = 1e-07
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Frame = +3
Query: 84 QEADVSFRPGFTVVFGIFATMFALILLMLFCAKFCHRGLLTLEPSLAADDRSILPLLQPS 263
Q+A +F+P VV I MF+L ++L AK CHR L ++ D + L L S
Sbjct: 31 QDAVSNFQPSLVVVIAILGLMFSLTFILLIFAKVCHRRQLL---PISDDPNNQLATLMRS 87
Query: 264 -----GIEKVAVDSLPFFRFDSLRGGRAG 335
GI+K A++SLPFF+F SL+G + G
Sbjct: 88 RSRFSGIDKTAIESLPFFKFSSLKGSKQG 116
>gb|ESW24890.1| hypothetical protein PHAVU_004G169200g [Phaseolus vulgaris]
Length = 426
Score = 60.1 bits (144), Expect = 3e-07
Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Frame = +3
Query: 87 EADVSFRPGFTVVFGIFATMFALILLMLFCAKFC-HRGLLTLEPSLAADDRSILPLL--- 254
+A +F+P VV GI MF L +L AKFC HRG S + ++ LP
Sbjct: 28 DAVSNFQPSLAVVIGILGVMFLLTFFLLMYAKFCQHRG-----SSASLGNQENLPTFVRS 82
Query: 255 --QPSGIEKVAVDSLPFFRFDSLRGGRAG 335
+ SGI+K ++SLPFFRF SL+G + G
Sbjct: 83 RSRFSGIDKTVIESLPFFRFSSLKGSKEG 111