BLASTX nr result
ID: Zingiber25_contig00045079
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00045079
(312 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera] 105 6e-21
ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containi... 102 5e-20
emb|CBI32403.3| unnamed protein product [Vitis vinifera] 102 5e-20
ref|XP_002300569.2| hypothetical protein POPTR_0001s47030g, part... 100 2e-19
ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
ref|XP_006487111.1| PREDICTED: pentatricopeptide repeat-containi... 90 3e-16
ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containi... 89 5e-16
ref|XP_004296063.1| PREDICTED: pentatricopeptide repeat-containi... 89 6e-16
gb|EXC20588.1| hypothetical protein L484_027143 [Morus notabilis] 87 3e-15
ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containi... 86 4e-15
ref|XP_004493379.1| PREDICTED: pentatricopeptide repeat-containi... 83 4e-14
gb|EOX98269.1| Tetratricopeptide repeat (TPR)-like superfamily p... 82 6e-14
ref|XP_003624942.1| Pentatricopeptide repeat-containing protein ... 82 7e-14
gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula] 82 7e-14
gb|EMJ00195.1| hypothetical protein PRUPE_ppa002176mg [Prunus pe... 80 2e-13
ref|XP_006343488.1| PREDICTED: pentatricopeptide repeat-containi... 79 6e-13
gb|ESW18386.1| hypothetical protein PHAVU_006G036400g [Phaseolus... 79 6e-13
ref|XP_004250798.1| PREDICTED: pentatricopeptide repeat-containi... 77 2e-12
ref|XP_006283127.1| hypothetical protein CARUB_v10004150mg [Caps... 77 3e-12
ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata] g... 76 4e-12
>emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 105 bits (262), Expect = 6e-21
Identities = 54/103 (52%), Positives = 66/103 (64%)
Frame = +2
Query: 2 GDLPSVVLTFRHAPVKTSITWNSMIACYVHHGFLKDALACFRCLILSPSPSARPDSFTFP 181
GD+ TF P K TWNSMI+ YVH+G +A+ CF L+L RPD +TFP
Sbjct: 165 GDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSE--IRPDFYTFP 222
Query: 182 VTIKACWDLEWGKRIHSLAYKLGFVCNVFVSASLVHMYSRLGF 310
+KAC L G+RIH A+KLGF NVFV+ASL+HMYSR GF
Sbjct: 223 PVLKACGTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGF 265
>ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 102 bits (254), Expect = 5e-20
Identities = 52/103 (50%), Positives = 65/103 (63%)
Frame = +2
Query: 2 GDLPSVVLTFRHAPVKTSITWNSMIACYVHHGFLKDALACFRCLILSPSPSARPDSFTFP 181
GD+ TF P K WNSMI+ YVH+G +A+ CF L+L RPD +TFP
Sbjct: 165 GDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSE--IRPDFYTFP 222
Query: 182 VTIKACWDLEWGKRIHSLAYKLGFVCNVFVSASLVHMYSRLGF 310
+KAC L G++IH A+KLGF NVFV+ASL+HMYSR GF
Sbjct: 223 PVLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGF 265
>emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 102 bits (254), Expect = 5e-20
Identities = 52/103 (50%), Positives = 65/103 (63%)
Frame = +2
Query: 2 GDLPSVVLTFRHAPVKTSITWNSMIACYVHHGFLKDALACFRCLILSPSPSARPDSFTFP 181
GD+ TF P K WNSMI+ YVH+G +A+ CF L+L RPD +TFP
Sbjct: 65 GDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSE--IRPDFYTFP 122
Query: 182 VTIKACWDLEWGKRIHSLAYKLGFVCNVFVSASLVHMYSRLGF 310
+KAC L G++IH A+KLGF NVFV+ASL+HMYSR GF
Sbjct: 123 PVLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGF 165
>ref|XP_002300569.2| hypothetical protein POPTR_0001s47030g, partial [Populus
trichocarpa] gi|550350056|gb|EEE85374.2| hypothetical
protein POPTR_0001s47030g, partial [Populus trichocarpa]
Length = 751
Score = 100 bits (249), Expect = 2e-19
Identities = 53/102 (51%), Positives = 61/102 (59%)
Frame = +2
Query: 2 GDLPSVVLTFRHAPVKTSITWNSMIACYVHHGFLKDALACFRCLILSPSPSARPDSFTFP 181
GD+ TF H P K TWNSM YV HG +AL CF + RPD +TFP
Sbjct: 48 GDVSLAWWTFHHLPNKDVYTWNSMAFAYVSHGRFCEALGCFNQFF--STSGLRPDFYTFP 105
Query: 182 VTIKACWDLEWGKRIHSLAYKLGFVCNVFVSASLVHMYSRLG 307
+KAC DL GK+IH L KLGF +VFV+ASLVHMYSR G
Sbjct: 106 PVVKACGDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFG 147
>ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 90.9 bits (224), Expect = 2e-16
Identities = 43/103 (41%), Positives = 61/103 (59%)
Frame = +2
Query: 2 GDLPSVVLTFRHAPVKTSITWNSMIACYVHHGFLKDALACFRCLILSPSPSARPDSFTFP 181
GD+P LTF K TWNSMI+ Y G A+ CF + + + D +TFP
Sbjct: 89 GDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFL--STSFLQSDHYTFP 146
Query: 182 VTIKACWDLEWGKRIHSLAYKLGFVCNVFVSASLVHMYSRLGF 310
I+AC +L+ G+++H L KLGF C+V+++AS +H YSR GF
Sbjct: 147 PVIRACGNLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGF 189
>ref|XP_006487111.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Citrus sinensis]
Length = 820
Score = 90.1 bits (222), Expect = 3e-16
Identities = 49/102 (48%), Positives = 61/102 (59%)
Frame = +2
Query: 2 GDLPSVVLTFRHAPVKTSITWNSMIACYVHHGFLKDALACFRCLILSPSPSARPDSFTFP 181
GDL TF H + TWNSMI+ YV G L +A+ CF L+ RPD +TFP
Sbjct: 93 GDLSFSRHTFDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSG--LRPDFYTFP 150
Query: 182 VTIKACWDLEWGKRIHSLAYKLGFVCNVFVSASLVHMYSRLG 307
+KAC +L GK+IH KLGF +VFV+ASL+HMY R G
Sbjct: 151 PVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
>ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 89.4 bits (220), Expect = 5e-16
Identities = 48/103 (46%), Positives = 63/103 (61%)
Frame = +2
Query: 2 GDLPSVVLTFRHAPVKTSITWNSMIACYVHHGFLKDALACFRCLILSPSPSARPDSFTFP 181
GD+ TF K TWNSMI+ YV +G ++A+ CF L+L A D +TFP
Sbjct: 122 GDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQA--DFYTFP 179
Query: 182 VTIKACWDLEWGKRIHSLAYKLGFVCNVFVSASLVHMYSRLGF 310
+KAC L G++IH +KLGF +VFV+ASL+HMYSR GF
Sbjct: 180 PVLKACQTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGF 222
>ref|XP_004296063.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Fragaria vesca subsp. vesca]
Length = 867
Score = 89.0 bits (219), Expect = 6e-16
Identities = 46/102 (45%), Positives = 62/102 (60%)
Frame = +2
Query: 2 GDLPSVVLTFRHAPVKTSITWNSMIACYVHHGFLKDALACFRCLILSPSPSARPDSFTFP 181
GD+ F P K TWNSM++ YV G ++A+ CF +++ RPD +TFP
Sbjct: 141 GDVSFSRRAFDSMPRKDVYTWNSMVSAYVRSGRFQEAVDCFSQFLVTSG--LRPDFYTFP 198
Query: 182 VTIKACWDLEWGKRIHSLAYKLGFVCNVFVSASLVHMYSRLG 307
+KAC +L GK+IHS KLG +VFV+ASL+HMYSR G
Sbjct: 199 PVLKACGNLNVGKKIHSWLIKLGLEWDVFVAASLIHMYSRSG 240
>gb|EXC20588.1| hypothetical protein L484_027143 [Morus notabilis]
Length = 778
Score = 86.7 bits (213), Expect = 3e-15
Identities = 46/103 (44%), Positives = 62/103 (60%)
Frame = +2
Query: 2 GDLPSVVLTFRHAPVKTSITWNSMIACYVHHGFLKDALACFRCLILSPSPSARPDSFTFP 181
GD+ TF P K TWNSMI+ YV ++AL CF LS + +P+ +TFP
Sbjct: 51 GDVSLSRRTFDQLPEKDIYTWNSMISAYVRTSRFREALHCF--YQLSSASGFQPNFYTFP 108
Query: 182 VTIKACWDLEWGKRIHSLAYKLGFVCNVFVSASLVHMYSRLGF 310
+KAC +L GK+IH KLG +++V+ASL+HMYSR GF
Sbjct: 109 PVLKACGNLVDGKKIHCQVLKLGCQWDIYVAASLIHMYSRFGF 151
>ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like isoform X1 [Glycine max]
gi|571544149|ref|XP_006602168.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X2 [Glycine max]
gi|571544153|ref|XP_006602169.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X3 [Glycine max]
gi|571544157|ref|XP_006602170.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X4 [Glycine max]
gi|571544163|ref|XP_006602171.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X5 [Glycine max]
Length = 824
Score = 86.3 bits (212), Expect = 4e-15
Identities = 42/102 (41%), Positives = 61/102 (59%)
Frame = +2
Query: 2 GDLPSVVLTFRHAPVKTSITWNSMIACYVHHGFLKDALACFRCLILSPSPSARPDSFTFP 181
GDL TF+H K +WNSM++ YV G +D++ C L+ RPD +TFP
Sbjct: 97 GDLSLSSTTFKHIQRKNIFSWNSMVSAYVRRGRYRDSMDCVTELL--SLSGVRPDFYTFP 154
Query: 182 VTIKACWDLEWGKRIHSLAYKLGFVCNVFVSASLVHMYSRLG 307
+KAC L G+++H K+GF +V+V+ASL+H+YSR G
Sbjct: 155 PVLKACLSLADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFG 196
>ref|XP_004493379.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cicer arietinum]
Length = 824
Score = 82.8 bits (203), Expect = 4e-14
Identities = 44/102 (43%), Positives = 60/102 (58%)
Frame = +2
Query: 2 GDLPSVVLTFRHAPVKTSITWNSMIACYVHHGFLKDALACFRCLILSPSPSARPDSFTFP 181
GD+ TF H K +WNSMIA YV +A+ C LS S RPD +TFP
Sbjct: 96 GDISLSRSTFNHIHKKNIFSWNSMIAAYVRSSKYHEAMNCVN-EFLSVSDDLRPDFYTFP 154
Query: 182 VTIKACWDLEWGKRIHSLAYKLGFVCNVFVSASLVHMYSRLG 307
+KAC +L GK++H K+GF +VFV++SL+++YSR G
Sbjct: 155 PILKACVNLIDGKKLHCWVLKMGFEHDVFVASSLINLYSRFG 196
>gb|EOX98269.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 820
Score = 82.4 bits (202), Expect = 6e-14
Identities = 43/92 (46%), Positives = 56/92 (60%)
Frame = +2
Query: 26 TFRHAPVKTSITWNSMIACYVHHGFLKDALACFRCLILSPSPSARPDSFTFPVTIKACWD 205
TF K TWNSM++ YV G ++A+ CF + RPD +TFP +KAC +
Sbjct: 101 TFDQINEKDVYTWNSMVSAYVRSGRFQEAVDCFYQFF--STSGLRPDFYTFPPVLKACKN 158
Query: 206 LEWGKRIHSLAYKLGFVCNVFVSASLVHMYSR 301
L G R+H L KLGF +VFV+ASLVHMY+R
Sbjct: 159 LPDGMRMHCLVLKLGFEWDVFVTASLVHMYTR 190
>ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 82.0 bits (201), Expect = 7e-14
Identities = 43/103 (41%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Frame = +2
Query: 2 GDLPSVVLTFRHAPVKTSITWNSMIACYVHHGFLKDALACFRCLI-LSPSPSARPDSFTF 178
GD+ TF + K +WNS+I+ YV G +A+ C L + RPD +TF
Sbjct: 68 GDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTF 127
Query: 179 PVTIKACWDLEWGKRIHSLAYKLGFVCNVFVSASLVHMYSRLG 307
P +KAC L GK++H +K+GF +VFV+ASLVH+YSR G
Sbjct: 128 PPILKACVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYG 170
>gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 82.0 bits (201), Expect = 7e-14
Identities = 43/103 (41%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Frame = +2
Query: 2 GDLPSVVLTFRHAPVKTSITWNSMIACYVHHGFLKDALACFRCLI-LSPSPSARPDSFTF 178
GD+ TF + K +WNS+I+ YV G +A+ C L + RPD +TF
Sbjct: 68 GDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTF 127
Query: 179 PVTIKACWDLEWGKRIHSLAYKLGFVCNVFVSASLVHMYSRLG 307
P +KAC L GK++H +K+GF +VFV+ASLVH+YSR G
Sbjct: 128 PPILKACVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYG 170
>gb|EMJ00195.1| hypothetical protein PRUPE_ppa002176mg [Prunus persica]
Length = 705
Score = 80.5 bits (197), Expect = 2e-13
Identities = 40/80 (50%), Positives = 53/80 (66%)
Frame = +2
Query: 71 MIACYVHHGFLKDALACFRCLILSPSPSARPDSFTFPVTIKACWDLEWGKRIHSLAYKLG 250
M++ YV G ++A+ CF +L+ RPD +TFP +KAC +L GKRIH KLG
Sbjct: 1 MVSAYVRSGHFREAIDCFSQFLLTSG--LRPDFYTFPPVLKACQNLVDGKRIHCQILKLG 58
Query: 251 FVCNVFVSASLVHMYSRLGF 310
F +VFV+ASLVH+YSR GF
Sbjct: 59 FEWDVFVAASLVHLYSRFGF 78
>ref|XP_006343488.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like isoform X1 [Solanum tuberosum]
gi|565353132|ref|XP_006343489.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X2 [Solanum tuberosum]
gi|565353134|ref|XP_006343490.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X3 [Solanum tuberosum]
gi|565353136|ref|XP_006343491.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X4 [Solanum tuberosum]
Length = 831
Score = 79.0 bits (193), Expect = 6e-13
Identities = 43/100 (43%), Positives = 59/100 (59%)
Frame = +2
Query: 2 GDLPSVVLTFRHAPVKTSITWNSMIACYVHHGFLKDALACFRCLILSPSPSARPDSFTFP 181
GD+ TF K + TWNSMI+ YV +G +++L C ++ + +PD +TFP
Sbjct: 103 GDVSLSQKTFCMIENKDAYTWNSMISSYVRNGHFRESLNCLNEML--STADVKPDFYTFP 160
Query: 182 VTIKACWDLEWGKRIHSLAYKLGFVCNVFVSASLVHMYSR 301
+KAC + G RIH A KLG +VFV+ASLVHMY R
Sbjct: 161 PVLKACNSIIDGVRIHCWASKLGLEWDVFVAASLVHMYCR 200
>gb|ESW18386.1| hypothetical protein PHAVU_006G036400g [Phaseolus vulgaris]
Length = 816
Score = 79.0 bits (193), Expect = 6e-13
Identities = 41/100 (41%), Positives = 59/100 (59%)
Frame = +2
Query: 2 GDLPSVVLTFRHAPVKTSITWNSMIACYVHHGFLKDALACFRCLILSPSPSARPDSFTFP 181
GDL TF H K TWNSM+A YV G ++A+ C L+ + RPD +TF
Sbjct: 89 GDLSLSRNTFEHIQRKNIFTWNSMVAAYVRCGRYREAMYCVSELL--SNSCVRPDFYTFA 146
Query: 182 VTIKACWDLEWGKRIHSLAYKLGFVCNVFVSASLVHMYSR 301
+KAC + G+++H K+GF +V+V+ASL+H+YSR
Sbjct: 147 PVLKACVSVVDGEKMHCWVLKMGFEHDVYVAASLIHLYSR 186
>ref|XP_004250798.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Solanum lycopersicum]
Length = 911
Score = 77.0 bits (188), Expect = 2e-12
Identities = 43/100 (43%), Positives = 58/100 (58%)
Frame = +2
Query: 2 GDLPSVVLTFRHAPVKTSITWNSMIACYVHHGFLKDALACFRCLILSPSPSARPDSFTFP 181
GD+ TF K + TWNSMI+ YV +G ++L C ++ + +PD +TFP
Sbjct: 183 GDVSLSQKTFCMIENKDAYTWNSMISSYVRNGHFWESLNCLNEML--STADVKPDFYTFP 240
Query: 182 VTIKACWDLEWGKRIHSLAYKLGFVCNVFVSASLVHMYSR 301
+KAC + G RIH A KLG +VFV+ASLVHMY R
Sbjct: 241 PVLKACNSIIDGVRIHCWASKLGLEWDVFVAASLVHMYCR 280
>ref|XP_006283127.1| hypothetical protein CARUB_v10004150mg [Capsella rubella]
gi|482551832|gb|EOA16025.1| hypothetical protein
CARUB_v10004150mg [Capsella rubella]
Length = 814
Score = 76.6 bits (187), Expect = 3e-12
Identities = 44/95 (46%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +2
Query: 26 TFRHAPVKTSITWNSMIACYVHHGFLKDALACFRCLILSPSPSA-RPDSFTFPVTIKACW 202
TF H + WNSMI+ HG D+ RC L S S RPD TFP +KAC
Sbjct: 98 TFDHIQNRDVYAWNSMIS---GHGRAGDSSGVIRCFSLFMSSSGLRPDYRTFPSVLKACR 154
Query: 203 DLEWGKRIHSLAYKLGFVCNVFVSASLVHMYSRLG 307
++ G +IH LA K GFV +VFV+ASL+H+Y R G
Sbjct: 155 NVFDGNKIHCLALKFGFVWDVFVAASLIHLYCRYG 189
>ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata
subsp. lyrata]
Length = 824
Score = 76.3 bits (186), Expect = 4e-12
Identities = 39/102 (38%), Positives = 58/102 (56%)
Frame = +2
Query: 2 GDLPSVVLTFRHAPVKTSITWNSMIACYVHHGFLKDALACFRCLILSPSPSARPDSFTFP 181
G++ TF H + WN MI+ Y G+ + + CF +LS +PD TFP
Sbjct: 100 GNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSG--LQPDYRTFP 157
Query: 182 VTIKACWDLEWGKRIHSLAYKLGFVCNVFVSASLVHMYSRLG 307
+KAC ++ G +IH LA K GF+ +V+V+ASL+H+Y R G
Sbjct: 158 SVLKACRNVTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYG 199