BLASTX nr result
ID: Zingiber25_contig00044996
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00044996
(336 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004290022.1| PREDICTED: photosystem I reaction center sub... 67 3e-09
gb|EMJ03037.1| hypothetical protein PRUPE_ppa012923mg [Prunus pe... 65 7e-09
sp|Q41229.1|PSAEB_NICSY RecName: Full=Photosystem I reaction cen... 65 1e-08
ref|XP_006352721.1| PREDICTED: photosystem I reaction center sub... 63 4e-08
ref|XP_004242379.1| PREDICTED: photosystem I reaction center sub... 63 5e-08
dbj|BAF80474.1| PSI reaction center subunit III [Citrus sinensis] 62 1e-07
ref|NP_001275778.1| PSI reaction center subunit III [Citrus sine... 62 1e-07
gb|AFK44960.1| unknown [Medicago truncatula] 61 2e-07
gb|ACJ85926.1| unknown [Medicago truncatula] 61 2e-07
ref|XP_002266424.1| PREDICTED: photosystem I reaction center sub... 60 2e-07
ref|XP_006350287.1| PREDICTED: photosystem I reaction center sub... 60 3e-07
ref|XP_004247116.1| PREDICTED: photosystem I reaction center sub... 60 4e-07
ref|XP_003625462.1| Photosystem I reaction center subunit IV A [... 56 4e-06
emb|CBI37232.3| unnamed protein product [Vitis vinifera] 56 6e-06
gb|ACJ84185.1| unknown [Medicago truncatula] gi|388516619|gb|AFK... 56 6e-06
sp|P12354.1|PSAE_SPIOL RecName: Full=Photosystem I reaction cent... 55 7e-06
>ref|XP_004290022.1| PREDICTED: photosystem I reaction center subunit IV A,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 141
Score = 66.6 bits (161), Expect = 3e-09
Identities = 39/94 (41%), Positives = 48/94 (51%)
Frame = +2
Query: 53 FVPATNITSSSTTNLRSTGLLFFSNKTNTNTRLVVRXXXXXXXXXXXXXXXXXXXXXXXX 232
FV N+ +S+T + T +LFFS+K+N N R
Sbjct: 13 FVVTPNVATSNTASASRTSMLFFSSKSNINAR-TSSGRFVIRAAEEGAAPPAAATKAPEA 71
Query: 233 XXXXXXIGPKRGTKVRILRPESYWYKGIGSVVAV 334
IGPKRGTKV+ILR ESYW+KGIGSVVAV
Sbjct: 72 KPKPPPIGPKRGTKVKILRRESYWFKGIGSVVAV 105
>gb|EMJ03037.1| hypothetical protein PRUPE_ppa012923mg [Prunus persica]
Length = 149
Score = 65.5 bits (158), Expect = 7e-09
Identities = 43/100 (43%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Frame = +2
Query: 53 FVPATNITSSSTTNLRST--GLLFFSNKTNTNTR----LVVRXXXXXXXXXXXXXXXXXX 214
FV A N+ +++ T S+ +LFFS+K NTNTR V+R
Sbjct: 15 FVVAPNVAAANNTGSASSRSSMLFFSSKPNTNTRNNARFVIRAADEAAAAPPAATKEAPE 74
Query: 215 XXXXXXXXXXXXIGPKRGTKVRILRPESYWYKGIGSVVAV 334
IGPKRGTKV+ILR ESYW+KGIGSVVAV
Sbjct: 75 GAAAPKPKPPP-IGPKRGTKVKILRRESYWFKGIGSVVAV 113
>sp|Q41229.1|PSAEB_NICSY RecName: Full=Photosystem I reaction center subunit IV B,
chloroplastic; Short=PSI-E B; Contains: RecName:
Full=Photosystem I reaction center subunit IV B isoform
2; Flags: Precursor gi|632724|gb|AAB31705.1| photosystem
I subunit PSI-E [Nicotiana sylvestris]
Length = 143
Score = 64.7 bits (156), Expect = 1e-08
Identities = 43/97 (44%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Frame = +2
Query: 53 FVPATNITSSSTTNLRSTGLLFFSNKTNTNT---RLVVRXXXXXXXXXXXXXXXXXXXXX 223
F+ AT ++S T R++ L F S+K NT T RLVVR
Sbjct: 13 FMVATPNIATSNTAPRTSMLFFSSSKNNTTTNFPRLVVRAAEEAAPPAATATAEGEAPPA 72
Query: 224 XXXXXXXXXIGPKRGTKVRILRPESYWYKGIGSVVAV 334
IGPKRGTKVR+LR ESYWYKG+GSVVAV
Sbjct: 73 KAAKPPP--IGPKRGTKVRVLRKESYWYKGVGSVVAV 107
>ref|XP_006352721.1| PREDICTED: photosystem I reaction center subunit IV A,
chloroplastic-like [Solanum tuberosum]
Length = 138
Score = 63.2 bits (152), Expect = 4e-08
Identities = 43/96 (44%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = +2
Query: 50 TFVPATNITSSSTTNLRSTGLLFF-SNKTNTNTRLVVRXXXXXXXXXXXXXXXXXXXXXX 226
+F+ AT +S+TT+ T +LFF SNK T RLVVR
Sbjct: 12 SFLVATPNVASNTTS--RTNMLFFPSNKITTTPRLVVRAAAEEAAPPGAAATAEPAVETK 69
Query: 227 XXXXXXXXIGPKRGTKVRILRPESYWYKGIGSVVAV 334
IGPKRG+KVR+LR ESYWYKG GSVVAV
Sbjct: 70 AAKPPP--IGPKRGSKVRVLRKESYWYKGTGSVVAV 103
>ref|XP_004242379.1| PREDICTED: photosystem I reaction center subunit IV A,
chloroplastic-like [Solanum lycopersicum]
Length = 138
Score = 62.8 bits (151), Expect = 5e-08
Identities = 43/95 (45%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = +2
Query: 53 FVPATNITSSSTTNLRSTGLLFF-SNKTNTNTRLVVRXXXXXXXXXXXXXXXXXXXXXXX 229
F+ AT +S+TT+ T +LFF SNK T RLVVR
Sbjct: 13 FLVATPNVASNTTS--RTNMLFFPSNKITTTQRLVVRAAAEEAAAPAAAATAEPAVETKA 70
Query: 230 XXXXXXXIGPKRGTKVRILRPESYWYKGIGSVVAV 334
IGPKRG+KVR+LR ESYWYKG GSVVAV
Sbjct: 71 AKPPP--IGPKRGSKVRVLRKESYWYKGTGSVVAV 103
>dbj|BAF80474.1| PSI reaction center subunit III [Citrus sinensis]
Length = 143
Score = 61.6 bits (148), Expect = 1e-07
Identities = 40/93 (43%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +2
Query: 62 ATNITSSSTTNLRSTGLLFFSNKTNTNT--RLVVRXXXXXXXXXXXXXXXXXXXXXXXXX 235
ATN+ S S +N+ LFF K N++ RLVVR
Sbjct: 20 ATNVNSGSKSNM-----LFFPPKNNSSNSFRLVVRASEDAAAPPAAATTAAPAEGEAAPK 74
Query: 236 XXXXXIGPKRGTKVRILRPESYWYKGIGSVVAV 334
IGPKRG KV+ILR ESYWY GIGSVVAV
Sbjct: 75 PKPPPIGPKRGAKVKILRRESYWYNGIGSVVAV 107
>ref|NP_001275778.1| PSI reaction center subunit III [Citrus sinensis]
gi|567902396|ref|XP_006443686.1| hypothetical protein
CICLE_v10022750mg [Citrus clementina]
gi|157678948|dbj|BAF80472.1| PS1 reaction center subunit
III [Citrus sinensis] gi|157678956|dbj|BAF80476.1| PSI
reaction center subunit III [Citrus sinensis]
gi|157678960|dbj|BAF80478.1| PSI reaction center subunit
III [Citrus sinensis] gi|557545948|gb|ESR56926.1|
hypothetical protein CICLE_v10022750mg [Citrus
clementina]
Length = 143
Score = 61.6 bits (148), Expect = 1e-07
Identities = 40/93 (43%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +2
Query: 62 ATNITSSSTTNLRSTGLLFFSNKTNTNT--RLVVRXXXXXXXXXXXXXXXXXXXXXXXXX 235
ATN+ S S +N+ LFF K N++ RLVVR
Sbjct: 20 ATNVNSGSKSNM-----LFFPPKNNSSNSFRLVVRASEEAAAPPAAATTAAPAEGEAAPK 74
Query: 236 XXXXXIGPKRGTKVRILRPESYWYKGIGSVVAV 334
IGPKRG KV+ILR ESYWY GIGSVVAV
Sbjct: 75 PKPPPIGPKRGAKVKILRRESYWYNGIGSVVAV 107
>gb|AFK44960.1| unknown [Medicago truncatula]
Length = 148
Score = 60.8 bits (146), Expect = 2e-07
Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Frame = +2
Query: 53 FVPATNITSSSTTNL---RSTGLLF---FSNKTNTNTRLVVRXXXXXXXXXXXXXXXXXX 214
F+ + N+ ++STT+ RST L+F +N ++++RLVVR
Sbjct: 13 FLLSLNVAANSTTSSASSRSTMLMFPLKSNNIGSSSSRLVVRATDEAAPAAPAAPAAPAA 72
Query: 215 XXXXXXXXXXXXIGPKRGTKVRILRPESYWYKGIGSVVAV 334
IGPKRG+KV+ILR ESYWYKG GSVVAV
Sbjct: 73 DAAPTPKPKPPPIGPKRGSKVKILRKESYWYKGTGSVVAV 112
>gb|ACJ85926.1| unknown [Medicago truncatula]
Length = 148
Score = 60.8 bits (146), Expect = 2e-07
Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Frame = +2
Query: 53 FVPATNITSSSTTNL---RSTGLLF---FSNKTNTNTRLVVRXXXXXXXXXXXXXXXXXX 214
F+ + N+ ++STT+ RST L+F +N ++++RLVVR
Sbjct: 13 FLLSLNVAANSTTSSASSRSTMLMFPLKSNNIGSSSSRLVVRATGEAAPAAPAAPAAPTA 72
Query: 215 XXXXXXXXXXXXIGPKRGTKVRILRPESYWYKGIGSVVAV 334
IGPKRG+KV+ILR ESYWYKG GSVVAV
Sbjct: 73 DAAPTPKPKPPPIGPKRGSKVKILRKESYWYKGTGSVVAV 112
>ref|XP_002266424.1| PREDICTED: photosystem I reaction center subunit IV A,
chloroplastic-like [Vitis vinifera]
Length = 143
Score = 60.5 bits (145), Expect = 2e-07
Identities = 40/90 (44%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Frame = +2
Query: 74 TSSSTTNLRST-GLLFFSNKTNTNTRLVVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 250
T +STT ST ++ FS K + N+RLVVR
Sbjct: 18 TPNSTTKPTSTPSMVIFSPKNHRNSRLVVRASEGGPPPPPPPPPPAPAPVAEGGAPPPKP 77
Query: 251 --IGPKRGTKVRILRPESYWYKGIGSVVAV 334
IGPKRGTKV+ILR ESYWY GIGSVVAV
Sbjct: 78 PPIGPKRGTKVKILRKESYWYNGIGSVVAV 107
>ref|XP_006350287.1| PREDICTED: photosystem I reaction center subunit IV B,
chloroplastic-like [Solanum tuberosum]
Length = 141
Score = 60.1 bits (144), Expect = 3e-07
Identities = 42/95 (44%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = +2
Query: 56 VPATNITSSSTTNLRSTGLLFFSNKTNTNT--RLVVRXXXXXXXXXXXXXXXXXXXXXXX 229
V N+TS+S + +L FS+K NT RLVVR
Sbjct: 15 VATPNVTSNSAPK---SSMLSFSSKNNTTNIPRLVVRAAEAAPPAATATATAEGEAPPAK 71
Query: 230 XXXXXXXIGPKRGTKVRILRPESYWYKGIGSVVAV 334
IGPKRGTKVRILR ESYWYKG GSVVAV
Sbjct: 72 AAKPPP-IGPKRGTKVRILRKESYWYKGTGSVVAV 105
>ref|XP_004247116.1| PREDICTED: photosystem I reaction center subunit IV B,
chloroplastic-like [Solanum lycopersicum]
Length = 140
Score = 59.7 bits (143), Expect = 4e-07
Identities = 43/94 (45%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +2
Query: 56 VPATNITSSSTTNLRSTGLLFFSNKTNTNT-RLVVRXXXXXXXXXXXXXXXXXXXXXXXX 232
V N+TS+S +S+ L F S T TN RLVVR
Sbjct: 15 VATPNVTSNSAP--KSSMLSFSSKNTTTNIPRLVVRAAEEAAPPAPTATAEGEAPPAKAV 72
Query: 233 XXXXXXIGPKRGTKVRILRPESYWYKGIGSVVAV 334
IGPKRGTKVRILR ESYWYKG GSVVAV
Sbjct: 73 KPPP--IGPKRGTKVRILRKESYWYKGTGSVVAV 104
>ref|XP_003625462.1| Photosystem I reaction center subunit IV A [Medicago truncatula]
gi|355500477|gb|AES81680.1| Photosystem I reaction
center subunit IV A [Medicago truncatula]
gi|388502410|gb|AFK39271.1| unknown [Medicago
truncatula]
Length = 138
Score = 56.2 bits (134), Expect = 4e-06
Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Frame = +2
Query: 68 NITSSSTTNLRST--GLLFFSNKTNTNTRLVVRXXXXXXXXXXXXXXXXXXXXXXXXXXX 241
N++ ++ TNL + ++ + NTN+RLVVR
Sbjct: 19 NVSGNTNTNLLVSRMNMVMYPTTRNTNSRLVVRASEEAAATPTVEGEAAPKTKPPP---- 74
Query: 242 XXXIGPKRGTKVRILRPESYWYKGIGSVVAV 334
IGPKRG KV++LR ESYW+ GIGSVVAV
Sbjct: 75 ---IGPKRGAKVKVLRKESYWFNGIGSVVAV 102
>emb|CBI37232.3| unnamed protein product [Vitis vinifera]
Length = 113
Score = 55.8 bits (133), Expect = 6e-06
Identities = 34/77 (44%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +2
Query: 110 LLFFSNKTNTNTRLVVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--IGPKRGTKVRI 283
++ FS K + N+RLVVR IGPKRGTKV+I
Sbjct: 1 MVIFSPKNHRNSRLVVRASEGGPPPPPPPPPPAPAPVAEGGAPPPKPPPIGPKRGTKVKI 60
Query: 284 LRPESYWYKGIGSVVAV 334
LR ESYWY GIGSVVAV
Sbjct: 61 LRKESYWYNGIGSVVAV 77
>gb|ACJ84185.1| unknown [Medicago truncatula] gi|388516619|gb|AFK46371.1| unknown
[Medicago truncatula]
Length = 138
Score = 55.8 bits (133), Expect = 6e-06
Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Frame = +2
Query: 68 NITSSSTTNLRST--GLLFFSNKTNTNTRLVVRXXXXXXXXXXXXXXXXXXXXXXXXXXX 241
N++ ++ TNL + ++ + NTN+RLVVR
Sbjct: 19 NVSCNTNTNLLVSRMNMVMYPTTRNTNSRLVVRASEEAAATPTVEGEAAPKTKPPP---- 74
Query: 242 XXXIGPKRGTKVRILRPESYWYKGIGSVVAV 334
IGPKRG KV++LR ESYW+ GIGSVVAV
Sbjct: 75 ---IGPKRGAKVKVLRKESYWFNGIGSVVAV 102
>sp|P12354.1|PSAE_SPIOL RecName: Full=Photosystem I reaction center subunit IV,
chloroplastic; Short=PSI-E; Flags: Precursor
gi|21295|emb|CAA32183.1| unnamed protein product
[Spinacia oleracea]
Length = 125
Score = 55.5 bits (132), Expect = 7e-06
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +2
Query: 251 IGPKRGTKVRILRPESYWYKGIGSVVAV 334
IGPKRG+KVRI+R ESYWYKG+GSVVAV
Sbjct: 62 IGPKRGSKVRIMRKESYWYKGVGSVVAV 89