BLASTX nr result

ID: Zingiber25_contig00044887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00044887
         (665 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_008854652.1| hypothetical chloroplast RF19 [Curcuma rosco...    63   7e-08
gb|AGE93428.1| hypothetical chloroplast RF19 [Alpinia zerumbet]        63   7e-08
ref|YP_007475762.1| hypothetical chloroplast RF19 [Zingiber spec...    58   2e-06

>ref|YP_008854652.1| hypothetical chloroplast RF19 [Curcuma roscoeana]
            gi|557637559|gb|AHA13154.1| hypothetical chloroplast RF19
            [Curcuma roscoeana]
          Length = 1815

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 30/32 (93%), Positives = 30/32 (93%)
 Frame = -2

Query: 655  IQSMNWTNFLFIENEMKDLADMTIIIRNPIEE 560
            IQSMNWTNFLFIENEMKDLAD TIIIRN IEE
Sbjct: 992  IQSMNWTNFLFIENEMKDLADKTIIIRNQIEE 1023


>gb|AGE93428.1| hypothetical chloroplast RF19 [Alpinia zerumbet]
          Length = 1795

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 30/32 (93%), Positives = 30/32 (93%)
 Frame = -2

Query: 655  IQSMNWTNFLFIENEMKDLADMTIIIRNPIEE 560
            IQSMNWTNFLFIENEMKDLAD TIIIRN IEE
Sbjct: 992  IQSMNWTNFLFIENEMKDLADKTIIIRNQIEE 1023


>ref|YP_007475762.1| hypothetical chloroplast RF19 [Zingiber spectabile]
            gi|449326242|gb|AGE92827.1| hypothetical chloroplast RF19
            [Zingiber spectabile]
          Length = 1817

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 30/34 (88%), Positives = 30/34 (88%), Gaps = 2/34 (5%)
 Frame = -2

Query: 655  IQSMNWTNFLFIE--NEMKDLADMTIIIRNPIEE 560
            IQSMNWTNFLFIE  NEMKDLAD TIIIRN IEE
Sbjct: 1001 IQSMNWTNFLFIEIENEMKDLADKTIIIRNQIEE 1034


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