BLASTX nr result
ID: Zingiber25_contig00044842
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00044842
(373 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004954142.1| PREDICTED: probable NOT transcription comple... 72 8e-11
ref|XP_004954141.1| PREDICTED: probable NOT transcription comple... 72 8e-11
gb|EOY34188.1| NOT2 / NOT3 / NOT5 family isoform 8 [Theobroma ca... 71 1e-10
gb|EOY34187.1| NOT2 / NOT3 / NOT5 family isoform 7, partial [The... 71 1e-10
gb|EOY34186.1| NOT2 / NOT3 / NOT5 family isoform 6 [Theobroma ca... 71 1e-10
gb|EOY34184.1| NOT2 / NOT3 / NOT5 family isoform 4 [Theobroma ca... 71 1e-10
gb|EOY34183.1| NOT2 / NOT3 / NOT5 family isoform 3 [Theobroma ca... 71 1e-10
gb|EOY34181.1| NOT2 / NOT3 / NOT5 family isoform 1 [Theobroma ca... 71 1e-10
ref|XP_002530232.1| CCR4-NOT transcription complex subunit, puta... 71 2e-10
ref|XP_006592256.1| PREDICTED: probable NOT transcription comple... 70 2e-10
gb|ESW04127.1| hypothetical protein PHAVU_011G069400g [Phaseolus... 70 2e-10
gb|ESW04126.1| hypothetical protein PHAVU_011G069400g [Phaseolus... 70 2e-10
gb|EMS45352.1| putative NOT transcription complex subunit VIP2 [... 70 2e-10
ref|XP_003539751.1| PREDICTED: probable NOT transcription comple... 70 2e-10
gb|AFW64260.1| hypothetical protein ZEAMMB73_723058 [Zea mays] 70 3e-10
gb|AFW64259.1| hypothetical protein ZEAMMB73_723058 [Zea mays] 70 3e-10
ref|XP_002454664.1| hypothetical protein SORBIDRAFT_04g035110 [S... 70 3e-10
ref|XP_006597301.1| PREDICTED: probable NOT transcription comple... 69 8e-10
ref|XP_006597300.1| PREDICTED: probable NOT transcription comple... 69 8e-10
ref|XP_006597298.1| PREDICTED: probable NOT transcription comple... 69 8e-10
>ref|XP_004954142.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
isoform X2 [Setaria italica]
Length = 549
Score = 72.0 bits (175), Expect = 8e-11
Identities = 37/52 (71%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Frame = -3
Query: 155 MSGLLNPTLNDPASNL-DSSGRPYTTSFSGQSNTTPGFHHSGALQGLHNIHG 3
MSGLLN LN ASNL DS+GRP+T SFSGQS + PGFHHS GLHNIHG
Sbjct: 1 MSGLLNSNLNSSASNLTDSTGRPFTASFSGQSGSIPGFHHS----GLHNIHG 48
>ref|XP_004954141.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
isoform X1 [Setaria italica]
Length = 618
Score = 72.0 bits (175), Expect = 8e-11
Identities = 37/52 (71%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Frame = -3
Query: 155 MSGLLNPTLNDPASNL-DSSGRPYTTSFSGQSNTTPGFHHSGALQGLHNIHG 3
MSGLLN LN ASNL DS+GRP+T SFSGQS + PGFHHS GLHNIHG
Sbjct: 1 MSGLLNSNLNSSASNLTDSTGRPFTASFSGQSGSIPGFHHS----GLHNIHG 48
>gb|EOY34188.1| NOT2 / NOT3 / NOT5 family isoform 8 [Theobroma cacao]
Length = 574
Score = 71.2 bits (173), Expect = 1e-10
Identities = 36/53 (67%), Positives = 42/53 (79%), Gaps = 2/53 (3%)
Frame = -3
Query: 155 MSGLLNPTLNDPASNL-DSSGRPYTTSFSGQSNT-TPGFHHSGALQGLHNIHG 3
MSGLLN ++N ASNL DSSGR + TSFSGQS +P FHH+G +QGLHNIHG
Sbjct: 1 MSGLLNSSINGSASNLPDSSGRSFATSFSGQSGAASPVFHHTGTIQGLHNIHG 53
>gb|EOY34187.1| NOT2 / NOT3 / NOT5 family isoform 7, partial [Theobroma cacao]
Length = 643
Score = 71.2 bits (173), Expect = 1e-10
Identities = 36/53 (67%), Positives = 42/53 (79%), Gaps = 2/53 (3%)
Frame = -3
Query: 155 MSGLLNPTLNDPASNL-DSSGRPYTTSFSGQSNT-TPGFHHSGALQGLHNIHG 3
MSGLLN ++N ASNL DSSGR + TSFSGQS +P FHH+G +QGLHNIHG
Sbjct: 1 MSGLLNSSINGSASNLPDSSGRSFATSFSGQSGAASPVFHHTGTIQGLHNIHG 53
>gb|EOY34186.1| NOT2 / NOT3 / NOT5 family isoform 6 [Theobroma cacao]
Length = 576
Score = 71.2 bits (173), Expect = 1e-10
Identities = 36/53 (67%), Positives = 42/53 (79%), Gaps = 2/53 (3%)
Frame = -3
Query: 155 MSGLLNPTLNDPASNL-DSSGRPYTTSFSGQSNT-TPGFHHSGALQGLHNIHG 3
MSGLLN ++N ASNL DSSGR + TSFSGQS +P FHH+G +QGLHNIHG
Sbjct: 1 MSGLLNSSINGSASNLPDSSGRSFATSFSGQSGAASPVFHHTGTIQGLHNIHG 53
>gb|EOY34184.1| NOT2 / NOT3 / NOT5 family isoform 4 [Theobroma cacao]
Length = 618
Score = 71.2 bits (173), Expect = 1e-10
Identities = 36/53 (67%), Positives = 42/53 (79%), Gaps = 2/53 (3%)
Frame = -3
Query: 155 MSGLLNPTLNDPASNL-DSSGRPYTTSFSGQSNT-TPGFHHSGALQGLHNIHG 3
MSGLLN ++N ASNL DSSGR + TSFSGQS +P FHH+G +QGLHNIHG
Sbjct: 1 MSGLLNSSINGSASNLPDSSGRSFATSFSGQSGAASPVFHHTGTIQGLHNIHG 53
>gb|EOY34183.1| NOT2 / NOT3 / NOT5 family isoform 3 [Theobroma cacao]
Length = 639
Score = 71.2 bits (173), Expect = 1e-10
Identities = 36/53 (67%), Positives = 42/53 (79%), Gaps = 2/53 (3%)
Frame = -3
Query: 155 MSGLLNPTLNDPASNL-DSSGRPYTTSFSGQSNT-TPGFHHSGALQGLHNIHG 3
MSGLLN ++N ASNL DSSGR + TSFSGQS +P FHH+G +QGLHNIHG
Sbjct: 1 MSGLLNSSINGSASNLPDSSGRSFATSFSGQSGAASPVFHHTGTIQGLHNIHG 53
>gb|EOY34181.1| NOT2 / NOT3 / NOT5 family isoform 1 [Theobroma cacao]
Length = 664
Score = 71.2 bits (173), Expect = 1e-10
Identities = 36/53 (67%), Positives = 42/53 (79%), Gaps = 2/53 (3%)
Frame = -3
Query: 155 MSGLLNPTLNDPASNL-DSSGRPYTTSFSGQSNT-TPGFHHSGALQGLHNIHG 3
MSGLLN ++N ASNL DSSGR + TSFSGQS +P FHH+G +QGLHNIHG
Sbjct: 1 MSGLLNSSINGSASNLPDSSGRSFATSFSGQSGAASPVFHHTGTIQGLHNIHG 53
>ref|XP_002530232.1| CCR4-NOT transcription complex subunit, putative [Ricinus communis]
gi|223530236|gb|EEF32138.1| CCR4-NOT transcription
complex subunit, putative [Ricinus communis]
Length = 664
Score = 70.9 bits (172), Expect = 2e-10
Identities = 36/53 (67%), Positives = 42/53 (79%), Gaps = 2/53 (3%)
Frame = -3
Query: 155 MSGLLNPTLNDPASNL-DSSGRPYTTSFSGQSNT-TPGFHHSGALQGLHNIHG 3
MSGLLN +LN ASNL D++GR + TSFSGQS +P FHHSG +QGLHNIHG
Sbjct: 1 MSGLLNSSLNGSASNLPDNTGRSFATSFSGQSGAASPVFHHSGTIQGLHNIHG 53
>ref|XP_006592256.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
isoform X3 [Glycine max]
Length = 620
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/53 (66%), Positives = 42/53 (79%), Gaps = 2/53 (3%)
Frame = -3
Query: 155 MSGLLNPTLNDPASNL-DSSGRPYTTSFSGQSNT-TPGFHHSGALQGLHNIHG 3
MSGLLN +LN ASNL D +GR + +SFSGQS +P FHH+GA+QGLHNIHG
Sbjct: 1 MSGLLNSSLNGSASNLPDGAGRSFASSFSGQSGAASPNFHHTGAIQGLHNIHG 53
>gb|ESW04127.1| hypothetical protein PHAVU_011G069400g [Phaseolus vulgaris]
gi|561005134|gb|ESW04128.1| hypothetical protein
PHAVU_011G069400g [Phaseolus vulgaris]
Length = 658
Score = 70.5 bits (171), Expect = 2e-10
Identities = 36/53 (67%), Positives = 42/53 (79%), Gaps = 2/53 (3%)
Frame = -3
Query: 155 MSGLLNPTLNDPASNL-DSSGRPYTTSFSGQSNT-TPGFHHSGALQGLHNIHG 3
MSGLLN +LN ASNL D +GR + TSFSGQS +P FHH+GA+QGLHNIHG
Sbjct: 1 MSGLLNSSLNGSASNLPDGAGRSFATSFSGQSGAASPIFHHTGAIQGLHNIHG 53
>gb|ESW04126.1| hypothetical protein PHAVU_011G069400g [Phaseolus vulgaris]
Length = 620
Score = 70.5 bits (171), Expect = 2e-10
Identities = 36/53 (67%), Positives = 42/53 (79%), Gaps = 2/53 (3%)
Frame = -3
Query: 155 MSGLLNPTLNDPASNL-DSSGRPYTTSFSGQSNT-TPGFHHSGALQGLHNIHG 3
MSGLLN +LN ASNL D +GR + TSFSGQS +P FHH+GA+QGLHNIHG
Sbjct: 1 MSGLLNSSLNGSASNLPDGAGRSFATSFSGQSGAASPIFHHTGAIQGLHNIHG 53
>gb|EMS45352.1| putative NOT transcription complex subunit VIP2 [Triticum urartu]
Length = 844
Score = 70.5 bits (171), Expect = 2e-10
Identities = 37/52 (71%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Frame = -3
Query: 155 MSGLLNPTLNDPASNL-DSSGRPYTTSFSGQSNTTPGFHHSGALQGLHNIHG 3
MSGLLN LN SNL DSSGRP+TTSFSGQS + GFHHS GLHNIHG
Sbjct: 1 MSGLLNSNLNTSTSNLPDSSGRPFTTSFSGQSGSVQGFHHS----GLHNIHG 48
>ref|XP_003539751.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
isoform X1 [Glycine max]
Length = 658
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/53 (66%), Positives = 42/53 (79%), Gaps = 2/53 (3%)
Frame = -3
Query: 155 MSGLLNPTLNDPASNL-DSSGRPYTTSFSGQSNT-TPGFHHSGALQGLHNIHG 3
MSGLLN +LN ASNL D +GR + +SFSGQS +P FHH+GA+QGLHNIHG
Sbjct: 1 MSGLLNSSLNGSASNLPDGAGRSFASSFSGQSGAASPNFHHTGAIQGLHNIHG 53
>gb|AFW64260.1| hypothetical protein ZEAMMB73_723058 [Zea mays]
Length = 120
Score = 70.1 bits (170), Expect = 3e-10
Identities = 36/52 (69%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Frame = -3
Query: 155 MSGLLNPTLNDPASNL-DSSGRPYTTSFSGQSNTTPGFHHSGALQGLHNIHG 3
MSGLLN LN ASNL DS+GRP+T SFSGQS + PGFHHS GLHN HG
Sbjct: 1 MSGLLNSNLNSSASNLSDSAGRPFTASFSGQSGSIPGFHHS----GLHNTHG 48
>gb|AFW64259.1| hypothetical protein ZEAMMB73_723058 [Zea mays]
Length = 616
Score = 70.1 bits (170), Expect = 3e-10
Identities = 36/52 (69%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Frame = -3
Query: 155 MSGLLNPTLNDPASNL-DSSGRPYTTSFSGQSNTTPGFHHSGALQGLHNIHG 3
MSGLLN LN ASNL DS+GRP+T SFSGQS + PGFHHS GLHN HG
Sbjct: 1 MSGLLNSNLNSSASNLSDSAGRPFTASFSGQSGSIPGFHHS----GLHNTHG 48
>ref|XP_002454664.1| hypothetical protein SORBIDRAFT_04g035110 [Sorghum bicolor]
gi|241934495|gb|EES07640.1| hypothetical protein
SORBIDRAFT_04g035110 [Sorghum bicolor]
Length = 614
Score = 70.1 bits (170), Expect = 3e-10
Identities = 36/52 (69%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Frame = -3
Query: 155 MSGLLNPTLNDPASNL-DSSGRPYTTSFSGQSNTTPGFHHSGALQGLHNIHG 3
MSGLLN LN ASNL DS+GRP+T SFSGQS + PGFHHS GLHN HG
Sbjct: 1 MSGLLNSNLNSSASNLPDSAGRPFTASFSGQSGSIPGFHHS----GLHNTHG 48
>ref|XP_006597301.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
isoform X6 [Glycine max]
Length = 624
Score = 68.6 bits (166), Expect = 8e-10
Identities = 35/53 (66%), Positives = 41/53 (77%), Gaps = 2/53 (3%)
Frame = -3
Query: 155 MSGLLNPTLNDPASNL-DSSGRPYTTSFSGQSNT-TPGFHHSGALQGLHNIHG 3
MS LLN +LN ASNL D +GR + TSFSGQS +P FHHSG++QGLHNIHG
Sbjct: 1 MSSLLNSSLNGSASNLPDGAGRSFATSFSGQSGVASPVFHHSGSIQGLHNIHG 53
>ref|XP_006597300.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
isoform X5 [Glycine max]
Length = 625
Score = 68.6 bits (166), Expect = 8e-10
Identities = 35/53 (66%), Positives = 41/53 (77%), Gaps = 2/53 (3%)
Frame = -3
Query: 155 MSGLLNPTLNDPASNL-DSSGRPYTTSFSGQSNT-TPGFHHSGALQGLHNIHG 3
MS LLN +LN ASNL D +GR + TSFSGQS +P FHHSG++QGLHNIHG
Sbjct: 1 MSSLLNSSLNGSASNLPDGAGRSFATSFSGQSGVASPVFHHSGSIQGLHNIHG 53
>ref|XP_006597298.1| PREDICTED: probable NOT transcription complex subunit VIP2-like
isoform X3 [Glycine max]
Length = 656
Score = 68.6 bits (166), Expect = 8e-10
Identities = 35/53 (66%), Positives = 41/53 (77%), Gaps = 2/53 (3%)
Frame = -3
Query: 155 MSGLLNPTLNDPASNL-DSSGRPYTTSFSGQSNT-TPGFHHSGALQGLHNIHG 3
MS LLN +LN ASNL D +GR + TSFSGQS +P FHHSG++QGLHNIHG
Sbjct: 1 MSSLLNSSLNGSASNLPDGAGRSFATSFSGQSGVASPVFHHSGSIQGLHNIHG 53