BLASTX nr result
ID: Zingiber25_contig00044823
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00044823
(313 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004300978.1| PREDICTED: pentatricopeptide repeat-containi... 69 8e-10
ref|XP_004509956.1| PREDICTED: pentatricopeptide repeat-containi... 66 5e-09
ref|XP_002533966.1| pentatricopeptide repeat-containing protein,... 63 4e-08
ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containi... 63 5e-08
ref|XP_002311462.1| pentatricopeptide repeat-containing family p... 62 8e-08
gb|ESW28265.1| hypothetical protein PHAVU_003G272400g [Phaseolus... 62 1e-07
ref|XP_003628741.1| Pentatricopeptide repeat-containing protein ... 62 1e-07
ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
ref|XP_006448464.1| hypothetical protein CICLE_v10017589mg [Citr... 58 1e-06
ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera] 58 1e-06
ref|XP_006468705.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
gb|EMJ27535.1| hypothetical protein PRUPE_ppa022305mg [Prunus pe... 57 3e-06
gb|EXB56456.1| hypothetical protein L484_009882 [Morus notabilis] 55 7e-06
gb|EOX91401.1| Pentatricopeptide repeat superfamily protein, put... 55 1e-05
>ref|XP_004300978.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 590
Score = 68.6 bits (166), Expect = 8e-10
Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Frame = +2
Query: 2 HGLHRDPFLAPRIAAASFRCGAPAIAHRSFDQIPEPTTVLHNVMFKGYNXXXXXXXXXXX 181
HG ++ ++AP++ A A AH+ FDQIPEP L N + +GY
Sbjct: 31 HGFSQNDYVAPKLVTACAELKRMAYAHQVFDQIPEPNFALWNALLRGYARNEGHREVVAL 90
Query: 182 XXXXXXXGVPHNRFTFPLVIK--S*AGGSAEGEQVHCLAIKSGVEA 313
+ N +TFP+VIK G EGE+VHC+AIK G A
Sbjct: 91 FCRMKNMDIMPNCYTFPVVIKCCGRLGRLVEGEEVHCVAIKCGFRA 136
>ref|XP_004509956.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cicer arietinum]
Length = 603
Score = 65.9 bits (159), Expect = 5e-09
Identities = 38/106 (35%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +2
Query: 2 HGLHRDPFLAPRIAAASFRCGAPAIAHRSFDQIPEPTTVLHNVMFKGYNXXXXXXXXXXX 181
HGL + F+AP R A + FD+IPEP T N MF+GY+
Sbjct: 44 HGLEHNDFVAPSFITTCSRLRRMQHARKLFDKIPEPNTATWNAMFRGYSQNEHHRDAVIL 103
Query: 182 XXXXXXXGVPHNRFTFPLVIKS*AGGSA--EGEQVHCLAIKSGVEA 313
N FTFP++IKS A EGE+VHC A K G ++
Sbjct: 104 FCKLNRVSAVPNCFTFPMIIKSCTKTKAFIEGEEVHCCAAKRGFKS 149
>ref|XP_002533966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223526049|gb|EEF28413.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 515
Score = 63.2 bits (152), Expect = 4e-08
Identities = 38/106 (35%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Frame = +2
Query: 2 HGLHRDPFLAPRIAAASFRCGAPAIAHRSFDQIPEPTTVLHNVMFKGYNXXXXXXXXXXX 181
HGL + ++ P+I + AH+ FDQIPEP N M KGY+
Sbjct: 92 HGLQFNDYITPKIITSFALFKRMRHAHKLFDQIPEPNVSNWNAMLKGYSLNDSHREVIVL 151
Query: 182 XXXXXXXGVPHNRFTFPLVIKS*AGGSA--EGEQVHCLAIKSGVEA 313
+ N F+FP+VIKS +A EGE++HC IKSG A
Sbjct: 152 FRKMISMDILPNCFSFPIVIKSSVKINAFKEGEELHCFVIKSGCRA 197
>ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 619
Score = 62.8 bits (151), Expect = 5e-08
Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +2
Query: 2 HGLHRDPFLAPRIAAASFRCGAPAIAHRSFDQIPEPTTVLHNVMFKGYNXXXXXXXXXXX 181
HGL + ++ P A R G A R FD+ +P N MF+GY
Sbjct: 48 HGLEGNDYVTPSFITACARLGGIRRARRVFDKTAQPNGATWNAMFRGYAQANCHLDVVVL 107
Query: 182 XXXXXXXGVPHNRFTFPLVIKS*AGGSA--EGEQVHCLAIKSGVEA 313
G N FTFP+V+KS A +A EGE+VHC+ K G ++
Sbjct: 108 FARMHRAGASPNCFTFPMVVKSCATANAAKEGEEVHCVVAKRGFKS 153
>ref|XP_002311462.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222851282|gb|EEE88829.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 538
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/81 (41%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +2
Query: 77 AHRSFDQIPEPTTVLHNVMFKGYNXXXXXXXXXXXXXXXXXXGVPHNRFTFPLVIKS*AG 256
AH+ FDQIPEP + N MF+GY+ V N FTFP+++KS
Sbjct: 4 AHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKSCVK 63
Query: 257 GSA--EGEQVHCLAIKSGVEA 313
+A EGE+VHC IKSG A
Sbjct: 64 INALKEGEEVHCFVIKSGFRA 84
>gb|ESW28265.1| hypothetical protein PHAVU_003G272400g [Phaseolus vulgaris]
Length = 618
Score = 61.6 bits (148), Expect = 1e-07
Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +2
Query: 2 HGLHRDPFLAPRIAAASFRCGAPAIAHRSFDQIPEPTTVLHNVMFKGYNXXXXXXXXXXX 181
HGL + ++ P A R G A R FD+ +P N MF+G+
Sbjct: 48 HGLQGNDYVTPSFITACARLGRMGHARRVFDRTAQPNGATWNSMFQGFALLESPFDVVVL 107
Query: 182 XXXXXXXGVPHNRFTFPLVIKS*AGGSA--EGEQVHCLAIKSGVEA 313
G N FTFP+V+KS A +A EGEQVHC+ K G ++
Sbjct: 108 FAQMHRAGASPNCFTFPMVVKSCAQANAVREGEQVHCVVAKRGFKS 153
>ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 758
Score = 61.6 bits (148), Expect = 1e-07
Identities = 37/106 (34%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Frame = +2
Query: 2 HGLHRDPFLAPRIAAASFRCGAPAIAHRSFDQIPEPTTVLHNVMFKGYNXXXXXXXXXXX 181
HGL + F+AP R A + FD+IP+P T N MF+GY
Sbjct: 38 HGLEHNDFVAPNFITTCSRFKRIHHARKLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVL 97
Query: 182 XXXXXXXGVPHNRFTFPLVIKS*A--GGSAEGEQVHCLAIKSGVEA 313
N FTFP++IKS G EGE+VHC A K G ++
Sbjct: 98 FGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEEVHCCATKHGFKS 143
>ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 58.2 bits (139), Expect = 1e-06
Identities = 35/105 (33%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Frame = +2
Query: 2 HGLHRDPFLAPRIAAASFRCGAPAIAHRSFDQIPEPTTVLHNVMFKGYNXXXXXXXXXXX 181
HG + ++AP + + A A FD P+P L N + +GY
Sbjct: 51 HGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFL 110
Query: 182 XXXXXXXGVPHNRFTFPLVIKS*A--GGSAEGEQVHCLAIKSGVE 310
V N FTFPLV+KS A G EGE++HC IK G+E
Sbjct: 111 FGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLE 155
>ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 58.2 bits (139), Expect = 1e-06
Identities = 35/105 (33%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Frame = +2
Query: 2 HGLHRDPFLAPRIAAASFRCGAPAIAHRSFDQIPEPTTVLHNVMFKGYNXXXXXXXXXXX 181
HG + ++AP + + A A FD P+P L N + +GY
Sbjct: 93 HGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFL 152
Query: 182 XXXXXXXGVPHNRFTFPLVIKS*A--GGSAEGEQVHCLAIKSGVE 310
V N FTFPLV+KS A G EGE++HC IK G+E
Sbjct: 153 FGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLE 197
>ref|XP_006448464.1| hypothetical protein CICLE_v10017589mg [Citrus clementina]
gi|557551075|gb|ESR61704.1| hypothetical protein
CICLE_v10017589mg [Citrus clementina]
Length = 611
Score = 57.8 bits (138), Expect = 1e-06
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Frame = +2
Query: 5 GLHRDPFLAPRIAAASFRCGAPAIAHRSFDQIPEPTTVLHNVMFKGYNXXXXXXXXXXXX 184
GL + ++ PRI A + A + FD+I + V N MF GY
Sbjct: 53 GLEQSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLF 112
Query: 185 XXXXXXGVPHNRFTFPLVIKS*AGGSA--EGEQVHCLAIKSGVEA 313
V N FTFP+V+KS +A EGE++HCL +K+G A
Sbjct: 113 TQMKKLDVMPNCFTFPVVLKSCVKINALREGEELHCLVLKNGFRA 157
>ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 57.8 bits (138), Expect = 1e-06
Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Frame = +2
Query: 2 HGLHRDPFLAPRIAAASFRCGAPAIAHRSFDQIPEPTTVLHNVMFKGYNXXXXXXXXXXX 181
+G + ++ P++ A + FDQIP+P L N MF+GY
Sbjct: 64 NGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFL 123
Query: 182 XXXXXXXGVPHNRFTFPLVIKS*AGGSA--EGEQVHCLAIKSG 304
+ N FTFP+V+KS +A EGEQVHC IK G
Sbjct: 124 FFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCG 166
>emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 57.8 bits (138), Expect = 1e-06
Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Frame = +2
Query: 2 HGLHRDPFLAPRIAAASFRCGAPAIAHRSFDQIPEPTTVLHNVMFKGYNXXXXXXXXXXX 181
+G + ++ P++ A + FDQIP+P L N MF+GY
Sbjct: 127 NGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFL 186
Query: 182 XXXXXXXGVPHNRFTFPLVIKS*AGGSA--EGEQVHCLAIKSG 304
+ N FTFP+V+KS +A EGEQVHC IK G
Sbjct: 187 FFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCG 229
>ref|XP_006468705.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like isoform X1 [Citrus sinensis]
Length = 587
Score = 56.6 bits (135), Expect = 3e-06
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Frame = +2
Query: 5 GLHRDPFLAPRIAAASFRCGAPAIAHRSFDQIPEPTTVLHNVMFKGYNXXXXXXXXXXXX 184
GL + ++ PRI A + A + FD+I + V N MF GY
Sbjct: 29 GLEQSDYITPRIITACAQLKQMTYARKMFDKITDQNVVSWNAMFNGYAQNEFHRTVVVLF 88
Query: 185 XXXXXXGVPHNRFTFPLVIKS*AGGSA--EGEQVHCLAIKSGVEA 313
N FTFP+V+KS +A EGE++HCL +K+G A
Sbjct: 89 TQMKKLDAMPNCFTFPIVLKSCVKINALREGEELHCLVLKNGFRA 133
>gb|EMJ27535.1| hypothetical protein PRUPE_ppa022305mg [Prunus persica]
Length = 454
Score = 56.6 bits (135), Expect = 3e-06
Identities = 33/83 (39%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +2
Query: 71 AIAHRSFDQIPEPTTVLHNVMFKGYNXXXXXXXXXXXXXXXXXXGVPHNRFTFPLVIKS* 250
A AH+ FD IP+P L N MF+GY + N FTFP+VIKS
Sbjct: 2 AYAHKVFDGIPDPNFALWNAMFRGYAKNQSHREVILLFGRMKSMDIMPNCFTFPVVIKSC 61
Query: 251 A--GGSAEGEQVHCLAIKSGVEA 313
EGE+VHC+ IK G A
Sbjct: 62 GRLKRLVEGEEVHCVVIKGGFRA 84
>gb|EXB56456.1| hypothetical protein L484_009882 [Morus notabilis]
Length = 538
Score = 55.5 bits (132), Expect = 7e-06
Identities = 33/83 (39%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +2
Query: 71 AIAHRSFDQIPEPTTVLHNVMFKGYNXXXXXXXXXXXXXXXXXXGVPHNRFTFPLVIKS* 250
A AH+ FDQIP+P L N MF+GY V N +TFP+VIKS
Sbjct: 2 AHAHKVFDQIPDPNVALWNAMFRGYAKNEWHREVILLFCRMKSLDVMPNCYTFPVVIKSC 61
Query: 251 AGGSA--EGEQVHCLAIKSGVEA 313
+A EGE+++C IK G A
Sbjct: 62 GKINALVEGEEINCELIKGGFRA 84
>gb|EOX91401.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao]
Length = 950
Score = 55.1 bits (131), Expect = 1e-05
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Frame = +2
Query: 2 HGLHRDPFLAPRIAAASFRCGAPAIAHRSFDQIPEPTTVLHNVMFKGYNXXXXXXXXXXX 181
HG + L + + F GAP +A +F +I P + N+M KG +
Sbjct: 30 HGFSKSNLLLGQFLKSCFNLGAPNLALSAFYKIQNPNLLFQNLMLKGLSNHGLYEDLLSV 89
Query: 182 XXXXXXXGVPHNRFTFPLVIK--S*AGGSAEGEQVHCLAIKSGVE 310
P + FTFP VIK S G G+Q+HC+ ++ G E
Sbjct: 90 YLKCRVLNCPSDDFTFPFVIKACSALGAFGIGKQIHCIVLRKGYE 134