BLASTX nr result

ID: Zingiber25_contig00044801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00044801
         (321 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS46244.1| hypothetical protein TRIUR3_27764 [Triticum urartu]     57   2e-06
ref|XP_006302074.1| hypothetical protein CARUB_v10020057mg [Caps...    56   6e-06
ref|XP_002889072.1| hypothetical protein ARALYDRAFT_476779 [Arab...    55   9e-06

>gb|EMS46244.1| hypothetical protein TRIUR3_27764 [Triticum urartu]
          Length = 529

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
 Frame = +3

Query: 3   PGRGEFHENPSTCICDAAE-SLNQINPNNQHRKGK-PTSDDFPEEPDGSERDYGEYTSLS 176
           PG+GEFHE+P  CIC   +       PN  +R G+ P +     E D S+ DYGE T L 
Sbjct: 442 PGKGEFHEHPMDCICARTKRRTGHSKPNLSNRAGEAPGNHTSDAEFDWSDLDYGENTPLG 501

Query: 177 KSSSNDTEMDY 209
             SSN+T+ DY
Sbjct: 502 GDSSNETDPDY 512


>ref|XP_006302074.1| hypothetical protein CARUB_v10020057mg [Capsella rubella]
           gi|482570784|gb|EOA34972.1| hypothetical protein
           CARUB_v10020057mg [Capsella rubella]
          Length = 570

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/82 (42%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
 Frame = +3

Query: 6   GRGEFHENPSTCICD--AAESLNQINPNNQHRKGKPTSDDF---------PEEPDGSERD 152
           GRGEFHENPSTCIC+   A++  Q+      +K K TS D           +EPD SE D
Sbjct: 473 GRGEFHENPSTCICEDTEAKAKAQVESRKIGKKNKYTSKDAAVTNDDQTEEDEPDWSEPD 532

Query: 153 YGEYTS--LSKSSSNDTEMDYD 212
           Y E  S    +   N T +DYD
Sbjct: 533 YEEEQSDLQDRGLYNGTSLDYD 554


>ref|XP_002889072.1| hypothetical protein ARALYDRAFT_476779 [Arabidopsis lyrata subsp.
           lyrata] gi|297334913|gb|EFH65331.1| hypothetical protein
           ARALYDRAFT_476779 [Arabidopsis lyrata subsp. lyrata]
          Length = 572

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 35/84 (41%), Positives = 43/84 (51%), Gaps = 15/84 (17%)
 Frame = +3

Query: 6   GRGEFHENPSTCICD--AAESLNQINPNNQHRKGKPTSDDF-----------PEEPDGSE 146
           GRGEFHENPSTCIC+   A++  Q+      +K K T+ D             +EPD SE
Sbjct: 473 GRGEFHENPSTCICEDTEAKAKAQMESRKLGKKNKSTNKDAAVTVTNDDQTEEDEPDWSE 532

Query: 147 RDYGEYTSLSKSSS--NDTEMDYD 212
            DY E  S  K     N T +DYD
Sbjct: 533 PDYEEEQSDLKDRGLYNGTSLDYD 556


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