BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00044749
         (523 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001045991.1| Os02g0164600 [Oryza sativa Japonica Group] g...   197   1e-48
ref|NP_001132129.1| uncharacterized protein LOC100193546 [Zea ma...   194   1e-47
ref|XP_004951868.1| PREDICTED: pentatricopeptide repeat-containi...   188   7e-46
ref|XP_006648344.1| PREDICTED: pentatricopeptide repeat-containi...   185   6e-45
ref|XP_003570973.1| PREDICTED: pentatricopeptide repeat-containi...   185   6e-45
gb|EMS56030.1| hypothetical protein TRIUR3_35165 [Triticum urartu]    184   8e-45
gb|ESW04582.1| hypothetical protein PHAVU_011G107600g [Phaseolus...   160   2e-37
ref|XP_006646479.1| PREDICTED: pentatricopeptide repeat-containi...   159   3e-37
ref|XP_006476888.1| PREDICTED: pentatricopeptide repeat-containi...   158   8e-37
ref|XP_006439922.1| hypothetical protein CICLE_v10024603mg [Citr...   157   1e-36
ref|XP_006851006.1| hypothetical protein AMTR_s00025p00218280 [A...   157   1e-36
ref|NP_001044803.1| Os01g0848300 [Oryza sativa Japonica Group] g...   157   1e-36
ref|XP_006350917.1| PREDICTED: pentatricopeptide repeat-containi...   156   2e-36
ref|XP_002308660.2| hypothetical protein POPTR_0006s26860g [Popu...   156   3e-36
ref|XP_006601143.1| PREDICTED: pentatricopeptide repeat-containi...   155   4e-36
ref|XP_004981445.1| PREDICTED: pentatricopeptide repeat-containi...   155   4e-36
ref|XP_004300978.1| PREDICTED: pentatricopeptide repeat-containi...   155   5e-36
ref|XP_002316137.1| pentatricopeptide repeat-containing family p...   155   5e-36
emb|CBI33742.3| unnamed protein product [Vitis vinifera]              155   7e-36
ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containi...   155   7e-36

>ref|NP_001045991.1| Os02g0164600 [Oryza sativa Japonica Group]
           gi|49388051|dbj|BAD25165.1| putative pentatricopeptide
           (PPR) repeat-containing protein [Oryza sativa Japonica
           Group] gi|49388408|dbj|BAD25541.1| putative
           pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group] gi|113535522|dbj|BAF07905.1|
           Os02g0164600 [Oryza sativa Japonica Group]
           gi|125538213|gb|EAY84608.1| hypothetical protein
           OsI_05976 [Oryza sativa Indica Group]
           gi|125580926|gb|EAZ21857.1| hypothetical protein
           OsJ_05503 [Oryza sativa Japonica Group]
           gi|215737275|dbj|BAG96204.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 476

 Score =  197 bits (501), Expect = 1e-48
 Identities = 102/173 (58%), Positives = 124/173 (71%), Gaps = 1/173 (0%)
 Frame = +2

Query: 8   LKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNSLI 187
           ++VF +MR  +  V PN  TVVS  SA  GLGSLE  K LHAY EK+GLE  +  +NSLI
Sbjct: 206 VEVFQEMRSCEEAVRPNVATVVSVASACAGLGSLEYAKGLHAYVEKVGLEGELIVKNSLI 265

Query: 188 AGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPDST 367
             Y KCGS+  A  +F  M  KDLHSWTAMI+ L SHG G+EAV ++ +M +  VLPDST
Sbjct: 266 DMYGKCGSIELARGLFGLMPQKDLHSWTAMISGLASHGHGKEAVALFFSMKEAGVLPDST 325

Query: 368 TFIAVLSACSHSGLVDEGIDIFESME-RFDVVPEPKHYGCVVDLLSRAGHLAQ 523
           TF+ VLSACSH+GLVDEGI IF SME  + V P+ KHYGC+VDL SRAG +A+
Sbjct: 326 TFVVVLSACSHAGLVDEGISIFNSMENEYKVTPDIKHYGCMVDLFSRAGLIAR 378



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 2/173 (1%)
 Frame = +2

Query: 5   ALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNSL 184
           AL++F+QMR   H+    +   +  +      G   L +SLH  + ++G    +F Q +L
Sbjct: 105 ALQLFDQMR---HRGVTTDRYTLPFLIHACSSGDRPLCESLHGQSLRLGYSSVLFTQTAL 161

Query: 185 IAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTM--CKMNVLP 358
           +  Y  C     A +VFD M  KD+ +WT M++     G+    VEV+  M  C+  V P
Sbjct: 162 MNAYFACRFEVAARRVFDEMQAKDVVAWTGMVSGYVDSGMFLRGVEVFQEMRSCEEAVRP 221

Query: 359 DSTTFIAVLSACSHSGLVDEGIDIFESMERFDVVPEPKHYGCVVDLLSRAGHL 517
           +  T ++V SAC+  G ++    +   +E+  +  E      ++D+  + G +
Sbjct: 222 NVATVVSVASACAGLGSLEYAKGLHAYVEKVGLEGELIVKNSLIDMYGKCGSI 274


>ref|NP_001132129.1| uncharacterized protein LOC100193546 [Zea mays]
           gi|194693506|gb|ACF80837.1| unknown [Zea mays]
           gi|413926460|gb|AFW66392.1| hypothetical protein
           ZEAMMB73_680096 [Zea mays]
          Length = 473

 Score =  194 bits (493), Expect = 1e-47
 Identities = 101/171 (59%), Positives = 122/171 (71%), Gaps = 1/171 (0%)
 Frame = +2

Query: 2   EALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNS 181
           +A++VFN+MR  D  V PNE TVVS  +A  GLGSLE  K LH+Y EK GLE  +  +N+
Sbjct: 201 KAVEVFNEMRGADDLVWPNEATVVSLATACAGLGSLEHAKGLHSYVEKAGLEDELIVRNA 260

Query: 182 LIAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPD 361
           L+  Y KCG +  A ++F  M  KDLHSWT MI+ L SHG G EAV ++ +MC+  VLPD
Sbjct: 261 LVDMYGKCGCIESAHRLFCLMREKDLHSWTTMISGLSSHGRGEEAVGLFFSMCEEGVLPD 320

Query: 362 STTFIAVLSACSHSGLVDEGIDIFESMERFDVVP-EPKHYGCVVDLLSRAG 511
           STTFI VLSACSH+GLVDEGI IF SME    VP + KHYGC+VDL SRAG
Sbjct: 321 STTFIVVLSACSHAGLVDEGIHIFNSMESEHNVPRDTKHYGCMVDLFSRAG 371



 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 48/171 (28%), Positives = 90/171 (52%), Gaps = 2/171 (1%)
 Frame = +2

Query: 5   ALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNSL 184
           AL++F++MR    +  P +   +  + +        L +SLH    ++G   +VF Q +L
Sbjct: 102 ALRLFDEMRS---RGVPTDPYTLPLLISACSCSGFTLCQSLHGQGFRLGYNCHVFTQTAL 158

Query: 185 IAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMN--VLP 358
           +  Y KCGSVA A +VF+ M VKD+ +WT+M++      +  +AVEV++ M   +  V P
Sbjct: 159 LNAYLKCGSVATACRVFEEMPVKDVVAWTSMVSGYVDSRMYLKAVEVFNEMRGADDLVWP 218

Query: 359 DSTTFIAVLSACSHSGLVDEGIDIFESMERFDVVPEPKHYGCVVDLLSRAG 511
           +  T +++ +AC+  G ++    +   +E+  +  E      +VD+  + G
Sbjct: 219 NEATVVSLATACAGLGSLEHAKGLHSYVEKAGLEDELIVRNALVDMYGKCG 269


>ref|XP_004951868.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Setaria italica]
          Length = 473

 Score =  188 bits (477), Expect = 7e-46
 Identities = 99/171 (57%), Positives = 121/171 (70%), Gaps = 1/171 (0%)
 Frame = +2

Query: 2   EALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNS 181
           +A++VF +MR  D  V PNE TVVS  SA  GLGSLE    LH+Y EKIGLE  +  +N+
Sbjct: 201 KAVEVFQEMRGADDLVWPNEATVVSVASACTGLGSLEYATGLHSYVEKIGLEGKLIVKNA 260

Query: 182 LIAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPD 361
           L+  Y KCGS+  A ++F  M  KDLHSWTAMI+ L SHG G+EAV ++ +M +  + PD
Sbjct: 261 LVDMYGKCGSIESARRLFCLMCEKDLHSWTAMISGLASHGHGKEAVALFFSMLEAGLNPD 320

Query: 362 STTFIAVLSACSHSGLVDEGIDIFESME-RFDVVPEPKHYGCVVDLLSRAG 511
           STTFI VLSACSHSGLVDEGI +F SME  + V    KHYGC+VDL SRAG
Sbjct: 321 STTFIVVLSACSHSGLVDEGIHVFNSMESEYRVSLSIKHYGCMVDLFSRAG 371



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 49/173 (28%), Positives = 88/173 (50%), Gaps = 2/173 (1%)
 Frame = +2

Query: 5   ALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNSL 184
           AL++F+QMR     V  +  T+   + A  G     L KSLH    ++G   ++F Q +L
Sbjct: 102 ALRLFDQMRR--RGVPADPYTLPFLIRACNG-SDPPLCKSLHGQGVRLGYGCHLFTQTAL 158

Query: 185 IAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMN--VLP 358
           +  Y  CGSV  A +VF+ M  +D+ +WT +++     G+  +AVEV+  M   +  V P
Sbjct: 159 MNMYFACGSVVAARRVFEEMPARDVVAWTGLVSGYVDSGMYLKAVEVFQEMRGADDLVWP 218

Query: 359 DSTTFIAVLSACSHSGLVDEGIDIFESMERFDVVPEPKHYGCVVDLLSRAGHL 517
           +  T ++V SAC+  G ++    +   +E+  +  +      +VD+  + G +
Sbjct: 219 NEATVVSVASACTGLGSLEYATGLHSYVEKIGLEGKLIVKNALVDMYGKCGSI 271


>ref|XP_006648344.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like, partial [Oryza brachyantha]
          Length = 473

 Score =  185 bits (469), Expect = 6e-45
 Identities = 95/173 (54%), Positives = 118/173 (68%), Gaps = 1/173 (0%)
 Frame = +2

Query: 8   LKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNSLI 187
           + VF +MR  +  V PN  TVVS  SA  GLGSLE  K LH Y EK+GLE  +   N+LI
Sbjct: 203 IMVFQEMRSCEDVVRPNVATVVSVASACAGLGSLEYAKGLHGYVEKVGLEGELIVTNALI 262

Query: 188 AGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPDST 367
             Y KCG +  A  +F  M  KDLHSWTA+I+   SHG G+EAV ++ +M +  VLPDS 
Sbjct: 263 DMYGKCGGIELARGLFGLMPQKDLHSWTAVISGFASHGHGKEAVALFLSMRESGVLPDSI 322

Query: 368 TFIAVLSACSHSGLVDEGIDIFESME-RFDVVPEPKHYGCVVDLLSRAGHLAQ 523
           TF+ VLSACSH+GLVDEGI +F SME  + V P+ KHYGC+VDL SRAG +A+
Sbjct: 323 TFVVVLSACSHAGLVDEGISVFNSMENEYKVTPDIKHYGCMVDLFSRAGLVAR 375



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 6/175 (3%)
 Frame = +2

Query: 5   ALKVFNQMRM----FDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFF 172
           AL++F+ MR      D    P  + V S+       G   L +SLH  +  +G    +F 
Sbjct: 102 ALQLFDHMRRRGVHTDRYTLPFLIHVCSS-------GDRLLCESLHGQSLCLGYGSTLFT 154

Query: 173 QNSLIAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTM--CKM 346
           Q +L+  Y  C   A A +VFD M  KD+ +WT M++     G+    + V+  M  C+ 
Sbjct: 155 QTALMNAYFVCRLWAAARRVFDEMQAKDVVAWTGMVSGYVDSGMFLRGIMVFQEMRSCED 214

Query: 347 NVLPDSTTFIAVLSACSHSGLVDEGIDIFESMERFDVVPEPKHYGCVVDLLSRAG 511
            V P+  T ++V SAC+  G ++    +   +E+  +  E      ++D+  + G
Sbjct: 215 VVRPNVATVVSVASACAGLGSLEYAKGLHGYVEKVGLEGELIVTNALIDMYGKCG 269


>ref|XP_003570973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Brachypodium distachyon]
          Length = 472

 Score =  185 bits (469), Expect = 6e-45
 Identities = 95/175 (54%), Positives = 122/175 (69%), Gaps = 1/175 (0%)
 Frame = +2

Query: 2   EALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNS 181
           EA++VF +MR  +    PN  T+VS  SA  GLGSLE  K LH Y EK+G   ++   N+
Sbjct: 203 EAVEVFQEMRRGEEVASPNVATIVSVASACAGLGSLEYAKWLHGYVEKLGFGSDLIVTNA 262

Query: 182 LIAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPD 361
           L+  Y KCG V  A  +F+ M  KDLHSWT +I+ L SHG  +E + ++S+M KM VLPD
Sbjct: 263 LMDMYGKCGGVESARALFNLMHEKDLHSWTTIISGLASHGHVKEGLALFSSMQKMGVLPD 322

Query: 362 STTFIAVLSACSHSGLVDEGIDIFESME-RFDVVPEPKHYGCVVDLLSRAGHLAQ 523
           STTFI VLSACSH+GLVDEG+ IF SME ++ V P+ KHYGC+VDL SRAG L++
Sbjct: 323 STTFIVVLSACSHAGLVDEGMCIFNSMESKYKVTPDIKHYGCMVDLFSRAGLLSR 377



 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
 Frame = +2

Query: 5   ALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNSL 184
           AL++F QM    H+  P +      +          L +SLH  + ++G   ++F Q +L
Sbjct: 104 ALRLFGQMH---HRDVPADTYTFPFLIHACSGSDPPLCESLHGQSIRVGYSSHLFTQTAL 160

Query: 185 IAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVL--P 358
           +  Y  CG  A A +VFD M  +D+  WT M++     G+  EAVEV+  M +   +  P
Sbjct: 161 MNMYFVCGLAAPARRVFDEMQARDVVVWTGMVSGYVDTGMHLEAVEVFQEMRRGEEVASP 220

Query: 359 DSTTFIAVLSACSHSGLVD 415
           +  T ++V SAC+  G ++
Sbjct: 221 NVATIVSVASACAGLGSLE 239


>gb|EMS56030.1| hypothetical protein TRIUR3_35165 [Triticum urartu]
          Length = 441

 Score =  184 bits (468), Expect = 8e-45
 Identities = 95/174 (54%), Positives = 121/174 (69%), Gaps = 1/174 (0%)
 Frame = +2

Query: 5   ALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNSL 184
           A +VF +MR  +    PN  T+VS  SA+  LGSLE  K LH Y EK+GL  ++   N+L
Sbjct: 170 AAEVFKEMRGGEEVTRPNVATLVSVASAYASLGSLEYAKGLHGYVEKVGLRGDLILTNAL 229

Query: 185 IAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPDS 364
           +  Y KCGS+  A  +FD M  KDL SWT MI+ L SHG G+EAV ++ +M ++ VLPDS
Sbjct: 230 MDMYGKCGSIESARALFDFMHEKDLLSWTTMISGLASHGHGKEAVALFLSMREVGVLPDS 289

Query: 365 TTFIAVLSACSHSGLVDEGIDIFESM-ERFDVVPEPKHYGCVVDLLSRAGHLAQ 523
           TTFI VLSACSH+GLVDEGI IF SM   + V+P+ KHYGC+VDL SRAG L++
Sbjct: 290 TTFIVVLSACSHAGLVDEGISIFNSMASEYKVIPDIKHYGCMVDLFSRAGLLSR 343


>gb|ESW04582.1| hypothetical protein PHAVU_011G107600g [Phaseolus vulgaris]
          Length = 700

 Score =  160 bits (405), Expect = 2e-37
 Identities = 87/173 (50%), Positives = 109/173 (63%), Gaps = 1/173 (0%)
 Frame = +2

Query: 2   EALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNS 181
           E L++F   RM +    P+EVTV+S + A   + +L L  S+H+Y  K G  +NV    +
Sbjct: 311 EVLELFG--RMVEGSAVPDEVTVISVLGACNQISALRLGTSVHSYVVKRGYGVNVAVGTA 368

Query: 182 LIAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPD 361
           LI  YA CGS+ CA  VFD M  K+L  WT MIT  G HG GREAV ++  M   NV PD
Sbjct: 369 LIGMYANCGSLICACCVFDEMPEKNLAVWTVMITGFGIHGRGREAVSIFYEMLGTNVTPD 428

Query: 362 STTFIAVLSACSHSGLVDEGIDIFESMER-FDVVPEPKHYGCVVDLLSRAGHL 517
              F AVLSACSHSGLVDEG +IF  + R ++V P P HY C+VDLL RAG+L
Sbjct: 429 EGIFTAVLSACSHSGLVDEGKEIFYKITRVYNVDPGPTHYSCLVDLLGRAGYL 481



 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 44/131 (33%), Positives = 71/131 (54%)
 Frame = +2

Query: 2   EALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNS 181
           ++L ++  M  F  K  P+  T    + A   L    + + +HA     GLE +V+  NS
Sbjct: 106 KSLVLYRDMLRFGQK--PDNFTYPFVLKACGDLLFRRIGRKVHALVVVGGLEKDVYVGNS 163

Query: 182 LIAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPD 361
           +++ Y K G VA A  VFD+M ++DL SW  M++    +G    A E++  M ++ V+ D
Sbjct: 164 ILSMYFKFGDVAAAQVVFDKMPMRDLTSWNTMVSGCVKNGEAEGAFEIFGEMRRVGVVGD 223

Query: 362 STTFIAVLSAC 394
            TT +A+LSAC
Sbjct: 224 GTTLLALLSAC 234



 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 44/145 (30%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
 Frame = +2

Query: 5   ALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINV---FFQ 175
           A ++F +MR     V  +  T+++ +SA   +  L++ K +H Y  + G    V   F  
Sbjct: 208 AFEIFGEMRRVG--VVGDGTTLLALLSACGDVMDLKMGKEIHGYVVRNGGNGRVHNGFLV 265

Query: 176 NSLIAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVL 355
           NS+I  Y  C S++CA ++F+R+ VKD+ SW ++I+     G   E +E++  M + + +
Sbjct: 266 NSVIDMYCNCESISCARKLFERLIVKDIVSWNSLISGYEKRGDAFEVLELFGRMVEGSAV 325

Query: 356 PDSTTFIAVLSACSHSGLVDEGIDI 430
           PD  T I+VL AC+    +  G  +
Sbjct: 326 PDEVTVISVLGACNQISALRLGTSV 350


>ref|XP_006646479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Oryza brachyantha]
          Length = 572

 Score =  159 bits (403), Expect = 3e-37
 Identities = 80/173 (46%), Positives = 112/173 (64%), Gaps = 1/173 (0%)
 Frame = +2

Query: 2   EALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNS 181
           +A+ +F +M   D  + PN +T+VS + A  G+ SL L K LHAY  + G +  V   N+
Sbjct: 181 DAILLFQEMMASDEDLVPNSITIVSILHACAGVNSLGLGKLLHAYILRRGFDTLVSVLNA 240

Query: 182 LIAGYAKCGSVACAVQVFDRMGV-KDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLP 358
           L+A Y KCG +    ++F+ +G  KD+ SW  +I+  G HG G EAV+V+  M +M V P
Sbjct: 241 LMAMYIKCGCLEAGRRIFNSIGHRKDVVSWNTLISGYGMHGFGHEAVQVFEVMTQMGVSP 300

Query: 359 DSTTFIAVLSACSHSGLVDEGIDIFESMERFDVVPEPKHYGCVVDLLSRAGHL 517
           +  TFI+VL ACSH+GLVDEG  +FESM  ++V P  +HY C+VDLL RAGHL
Sbjct: 301 NIITFISVLGACSHAGLVDEGKRLFESMVDYNVTPRAEHYACMVDLLGRAGHL 353


>ref|XP_006476888.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Citrus sinensis]
          Length = 695

 Score =  158 bits (399), Expect = 8e-37
 Identities = 83/171 (48%), Positives = 115/171 (67%), Gaps = 1/171 (0%)
 Frame = +2

Query: 2   EALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNS 181
           EAL VF+ M+M +  V PNEVT+VS +S    LG+LE  K +H Y +K  +E+ +    +
Sbjct: 306 EALGVFHDMQMAN--VVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTA 363

Query: 182 LIAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPD 361
           L+  YAKCG +  AV+VF +M +K++ SWT +I  L S+G G  A+E Y  M + N+ P+
Sbjct: 364 LMDFYAKCGLIENAVEVFKKMPLKNVFSWTVLIQCLASNGQGERALETYYIMREKNIEPN 423

Query: 362 STTFIAVLSACSHSGLVDEGIDIFESMER-FDVVPEPKHYGCVVDLLSRAG 511
              FIAVLSACSH G+VDEG ++F SM R FD+ P  +HYGC+VD+L RAG
Sbjct: 424 DVAFIAVLSACSHVGMVDEGRELFVSMSRDFDLEPRMEHYGCMVDILGRAG 474



 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 48/140 (34%), Positives = 80/140 (57%)
 Frame = +2

Query: 2   EALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNS 181
           E + +FN+MR  D  V  +EVT+++ + A   L  +EL   +  Y E+  L  NV    +
Sbjct: 205 EIVDLFNEMR--DLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTA 262

Query: 182 LIAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPD 361
           ++  YAKCG V  A ++F++M  KD+ +W+AMI+        +EA+ V+  M   NV+P+
Sbjct: 263 VVDMYAKCGHVDKARRLFEQMNRKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPN 322

Query: 362 STTFIAVLSACSHSGLVDEG 421
             T ++VLS C+  G ++ G
Sbjct: 323 EVTMVSVLSCCAVLGALETG 342



 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 50/162 (30%), Positives = 78/162 (48%)
 Frame = +2

Query: 32  MFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNSLIAGYAKCGS 211
           M  + V P+  T    + A   + +LE  + +HA   K G        N+LI  YA CG 
Sbjct: 112 MLQNSVEPDRFTFACTLKACSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYANCGR 171

Query: 212 VACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPDSTTFIAVLSA 391
           +  A ++FDRM  +D+ SW +M +        RE V++++ M  + V  D  T I VL A
Sbjct: 172 IDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMA 231

Query: 392 CSHSGLVDEGIDIFESMERFDVVPEPKHYGCVVDLLSRAGHL 517
           C     ++ G  I E ME  ++    K    VVD+ ++ GH+
Sbjct: 232 CGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGHV 273


>ref|XP_006439922.1| hypothetical protein CICLE_v10024603mg [Citrus clementina]
           gi|557542184|gb|ESR53162.1| hypothetical protein
           CICLE_v10024603mg [Citrus clementina]
          Length = 695

 Score =  157 bits (398), Expect = 1e-36
 Identities = 83/171 (48%), Positives = 115/171 (67%), Gaps = 1/171 (0%)
 Frame = +2

Query: 2   EALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNS 181
           EAL VF+ M+M +  V PNEVT+VS +S    LG+LE  K +H Y +K  +E+ +    +
Sbjct: 306 EALGVFHDMQMAN--VVPNEVTMVSVLSCCAVLGALETGKWVHLYVKKKRMELTITLGTA 363

Query: 182 LIAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPD 361
           L+  YAKCG +  AV+VF +M +K++  WT +I  L S+G G  A+E Y  M + N+ P+
Sbjct: 364 LMDFYAKCGLIENAVEVFKKMPLKNVFFWTVLIQCLASNGQGERALETYYIMREKNIEPN 423

Query: 362 STTFIAVLSACSHSGLVDEGIDIFESMER-FDVVPEPKHYGCVVDLLSRAG 511
             TFIAVLSACSH G+VDEG ++F SM R FD+ P  +HYGC+VD+L RAG
Sbjct: 424 DVTFIAVLSACSHVGMVDEGRELFVSMSRDFDLEPRMEHYGCMVDILGRAG 474



 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 48/140 (34%), Positives = 81/140 (57%)
 Frame = +2

Query: 2   EALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNS 181
           E + +FN+MR  D  V  +EVT+++ + A   L  +EL   +  Y E+  L  NV    +
Sbjct: 205 EIVDLFNEMR--DLGVKFDEVTLINVLMACGRLADIELGGWISEYMEEKELNGNVKLMTA 262

Query: 182 LIAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPD 361
           ++  YAKCG V  A ++F++M +KD+ +W+AMI+        +EA+ V+  M   NV+P+
Sbjct: 263 VVDMYAKCGHVDKARRLFEQMNIKDVVAWSAMISGYSQARRCKEALGVFHDMQMANVVPN 322

Query: 362 STTFIAVLSACSHSGLVDEG 421
             T ++VLS C+  G ++ G
Sbjct: 323 EVTMVSVLSCCAVLGALETG 342



 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 49/162 (30%), Positives = 79/162 (48%)
 Frame = +2

Query: 32  MFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNSLIAGYAKCGS 211
           M ++ + P+  T    + A   + +LE  + +HA   K G        N+LI  YA CG 
Sbjct: 112 MLENSLEPDRFTFACTLKACSRIRALEEGEQIHAQILKSGFGCRQLVTNTLIHLYAICGR 171

Query: 212 VACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPDSTTFIAVLSA 391
           +  A ++FDRM  +D+ SW +M +        RE V++++ M  + V  D  T I VL A
Sbjct: 172 IDIARKMFDRMSNRDVFSWNSMFSGYVKTECWREIVDLFNEMRDLGVKFDEVTLINVLMA 231

Query: 392 CSHSGLVDEGIDIFESMERFDVVPEPKHYGCVVDLLSRAGHL 517
           C     ++ G  I E ME  ++    K    VVD+ ++ GH+
Sbjct: 232 CGRLADIELGGWISEYMEEKELNGNVKLMTAVVDMYAKCGHV 273


>ref|XP_006851006.1| hypothetical protein AMTR_s00025p00218280 [Amborella trichopoda]
           gi|548854677|gb|ERN12587.1| hypothetical protein
           AMTR_s00025p00218280 [Amborella trichopoda]
          Length = 529

 Score =  157 bits (397), Expect = 1e-36
 Identities = 78/175 (44%), Positives = 119/175 (68%), Gaps = 1/175 (0%)
 Frame = +2

Query: 2   EALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNS 181
           +AL +F+QMRM   +  PN VT++  +SA   L +++L +++H Y+EK GL   VF +NS
Sbjct: 302 DALDLFSQMRMSGTR--PNSVTLLGVLSACTSLSAMQLGQAVHGYSEKTGLVSAVFVRNS 359

Query: 182 LIAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPD 361
           LI+ Y+KCGS+  A  VFD +  +D  SW++MIT  G +G G+EA++V++ M  +   PD
Sbjct: 360 LISFYSKCGSIEAARGVFDGILERDCRSWSSMITGYGLNGQGKEALQVFNEMLNLGFKPD 419

Query: 362 STTFIAVLSACSHSGLVDEGIDIFESMER-FDVVPEPKHYGCVVDLLSRAGHLAQ 523
              F++ LSAC H GLV EG +IF+SM + +++ P P+HY C+VDLL R+G L +
Sbjct: 420 LIVFLSALSACRHCGLVREGCEIFDSMTKVYEIDPGPEHYACLVDLLGRSGRLEE 474



 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 42/150 (28%), Positives = 78/150 (52%)
 Frame = +2

Query: 2   EALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNS 181
           E LK+F ++      V  N+  + S + A   L +L+L + +H    K+G E +   QNS
Sbjct: 52  ETLKLFQKLHC--SSVIGNDFILPSILKACSALQALQLGRQIHCQVIKMGHEFDTITQNS 109

Query: 182 LIAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPD 361
           L+  YAKC  V  A  +F+ M   D+ SW AMI+    +G   +A++++  M   ++ P+
Sbjct: 110 LLTMYAKCSDVEAASLMFNAMSKGDIVSWNAMISCHTRNGNCTKALQLFKLMEGSDMEPN 169

Query: 362 STTFIAVLSACSHSGLVDEGIDIFESMERF 451
             T  ++++  + +    E +DIF+  + +
Sbjct: 170 RATMCSLVAGFAQNSYGAEALDIFKRFQAY 199


>ref|NP_001044803.1| Os01g0848300 [Oryza sativa Japonica Group]
           gi|15408890|dbj|BAB64281.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|113534334|dbj|BAF06717.1| Os01g0848300 [Oryza
           sativa Japonica Group] gi|125572632|gb|EAZ14147.1|
           hypothetical protein OsJ_04076 [Oryza sativa Japonica
           Group]
          Length = 660

 Score =  157 bits (397), Expect = 1e-36
 Identities = 80/173 (46%), Positives = 110/173 (63%), Gaps = 1/173 (0%)
 Frame = +2

Query: 2   EALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNS 181
           +A+ +F +M   D  + PN VT+V  + AF G+ +L   K LHAY  + G +  V   N+
Sbjct: 269 DAILLFQEMVASDEDLVPNSVTIVCILHAFAGVNALGQGKLLHAYILRRGFDSLVSVLNA 328

Query: 182 LIAGYAKCGSVACAVQVFDRMGV-KDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLP 358
           L+A Y KCG +     +FD +G  KD+ SW  +I+  G HG G EAV+V+  M +M V P
Sbjct: 329 LMAMYMKCGCLEAGRHIFDLIGHRKDVVSWNTLISGYGMHGFGHEAVQVFEDMTQMGVSP 388

Query: 359 DSTTFIAVLSACSHSGLVDEGIDIFESMERFDVVPEPKHYGCVVDLLSRAGHL 517
           +  TFI+VL ACSH+GLVDEG  +FESM  ++V P  +HY C+VDLL RAGHL
Sbjct: 389 NIITFISVLGACSHAGLVDEGKRLFESMVDYNVTPRAEHYACMVDLLGRAGHL 441


>ref|XP_006350917.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum tuberosum]
          Length = 744

 Score =  156 bits (395), Expect = 2e-36
 Identities = 78/175 (44%), Positives = 117/175 (66%), Gaps = 1/175 (0%)
 Frame = +2

Query: 2   EALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNS 181
           EAL VFN++++   K  P+EVT+V A+SA   LG+++L   +H Y +K G+++N     +
Sbjct: 353 EALSVFNELQLIK-KAEPDEVTLVCALSACAQLGAIDLGGWIHVYIKKQGIKLNCHLTTA 411

Query: 182 LIAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPD 361
           LI  Y+KCG V  A+++FD + ++D+  W+AM+  L  HG G+EA+ ++  M +  V P+
Sbjct: 412 LIDMYSKCGDVEKALEMFDSVNIRDVFVWSAMVAGLAMHGRGKEAISLFLKMQEHKVKPN 471

Query: 362 STTFIAVLSACSHSGLVDEGIDIFESMER-FDVVPEPKHYGCVVDLLSRAGHLAQ 523
           S T I VL ACSHSGLV+EG +IF  ME  + +VP  KHY C+VD+L RAG L +
Sbjct: 472 SVTLINVLCACSHSGLVEEGREIFNQMENIYGIVPGVKHYACLVDILGRAGELEE 526



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 46/148 (31%), Positives = 79/148 (53%)
 Frame = +2

Query: 2   EALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNS 181
           EALK+F+  RM +  V PN VT+++ +SA      LE  + +H + ++ G+  ++   N+
Sbjct: 221 EALKMFH--RMGEENVRPNGVTMMAVLSACGKKLDLEFGRWVHVFIKRNGIRESLILDNA 278

Query: 182 LIAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPD 361
           ++  Y KCGS+  A ++F +MG KD+ SWT M+      G    A  + +TM       D
Sbjct: 279 ILDMYMKCGSIEDAERLFHKMGEKDIVSWTTMLVGYARAGNFNAARSILNTMPSQ----D 334

Query: 362 STTFIAVLSACSHSGLVDEGIDIFESME 445
              + A++SA   SG   E + +F  ++
Sbjct: 335 IAAWNALISAYEQSGKPKEALSVFNELQ 362



 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 45/129 (34%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
 Frame = +2

Query: 32  MFDHKVC-----PNEVTVVSAMSAFVGLGSLELVKSLHAYAEK---IGLEINVFFQNSLI 187
           MF + +C     P++ T      A   + +L   + LH    K   +GL+I  F  NSLI
Sbjct: 122 MFVNMICEGREFPSKFTYPFVFKASAKMKALRFGRGLHGMVVKGRDVGLDI--FVLNSLI 179

Query: 188 AGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPDST 367
             YA CG +  A  VF+ M  +D+ SW  MI      G   EA++++  M + NV P+  
Sbjct: 180 HFYADCGCLDEAYLVFENMQTRDVVSWNTMILGFAEGGYADEALKMFHRMGEENVRPNGV 239

Query: 368 TFIAVLSAC 394
           T +AVLSAC
Sbjct: 240 TMMAVLSAC 248


>ref|XP_002308660.2| hypothetical protein POPTR_0006s26860g [Populus trichocarpa]
           gi|550337158|gb|EEE92183.2| hypothetical protein
           POPTR_0006s26860g [Populus trichocarpa]
          Length = 487

 Score =  156 bits (394), Expect = 3e-36
 Identities = 81/171 (47%), Positives = 115/171 (67%), Gaps = 1/171 (0%)
 Frame = +2

Query: 2   EALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNS 181
           +A+ +F +M++    VCP+E+T+VS +SA  GLG+LEL K + +Y EK  ++ NV   N+
Sbjct: 98  DAINLFREMQI--KGVCPDEITMVSVLSACTGLGALELGKWVESYVEKERVQKNVELSNA 155

Query: 182 LIAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPD 361
           LI  +AKCG V  A  +F  M  +++ SWT++I  L  HG G EAV V+  M +  V PD
Sbjct: 156 LIDMFAKCGDVDKATNLFRSMRERNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPD 215

Query: 362 STTFIAVLSACSHSGLVDEGIDIFESMER-FDVVPEPKHYGCVVDLLSRAG 511
              FI +LSACSHSGLVD+G   F+SM + F +VP+ +HYGC+VD+L RAG
Sbjct: 216 DVVFIGLLSACSHSGLVDKGKGYFDSMRKDFSIVPKIEHYGCMVDMLCRAG 266



 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 4/164 (2%)
 Frame = +2

Query: 32  MFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNSLIAGYAKC-- 205
           M + K  PN+ T    + A  G+G+L L KS+H    K G    V  QN+L+  Y  C  
Sbjct: 1   MLERKKLPNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRG 60

Query: 206 --GSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPDSTTFIA 379
             G +  A +VFD M   D  SW+AMI      G   +A+ ++  M    V PD  T ++
Sbjct: 61  GEGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVS 120

Query: 380 VLSACSHSGLVDEGIDIFESMERFDVVPEPKHYGCVVDLLSRAG 511
           VLSAC+  G ++ G  +   +E+  V    +    ++D+ ++ G
Sbjct: 121 VLSACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCG 164


>ref|XP_006601143.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like isoform X1 [Glycine max]
           gi|571538394|ref|XP_006601144.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g21065-like isoform X2 [Glycine max]
           gi|571538398|ref|XP_006601145.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g21065-like isoform X3 [Glycine max]
           gi|571538402|ref|XP_006601146.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g21065-like isoform X4 [Glycine max]
          Length = 615

 Score =  155 bits (393), Expect = 4e-36
 Identities = 85/172 (49%), Positives = 115/172 (66%), Gaps = 1/172 (0%)
 Frame = +2

Query: 5   ALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNSL 184
           A+ +F +M++    VCP+E+T+VS +SA   LG+LEL K L +Y E+  +  +V   N+L
Sbjct: 227 AVTLFREMQVTG--VCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVELCNAL 284

Query: 185 IAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPDS 364
           I  +AKCG V  AV+VF  M V+ + SWT+MI  L  HG G EAV V+  M +  V PD 
Sbjct: 285 IDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDD 344

Query: 365 TTFIAVLSACSHSGLVDEGIDIFESMER-FDVVPEPKHYGCVVDLLSRAGHL 517
             FI VLSACSHSGLVD+G   F +ME  F +VP+ +HYGC+VD+LSRAG +
Sbjct: 345 VAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRV 396



 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 56/175 (32%), Positives = 89/175 (50%), Gaps = 6/175 (3%)
 Frame = +2

Query: 5   ALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNSL 184
           AL+ +N MR   H V PN+ T    + A  G+  LEL  ++HA   K G E +   +N+L
Sbjct: 121 ALRFYNTMRR--HAVSPNKFTFPFVLKACAGMMRLELGGAVHASMVKFGFEEDPHVRNTL 178

Query: 185 IAGYAKC------GSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKM 346
           +  Y  C      G V+ A +VFD   VKD  +W+AMI      G    AV ++  M   
Sbjct: 179 VHMYCCCCQDGSSGPVS-AKKVFDESPVKDSVTWSAMIGGYARAGNSARAVTLFREMQVT 237

Query: 347 NVLPDSTTFIAVLSACSHSGLVDEGIDIFESMERFDVVPEPKHYGCVVDLLSRAG 511
            V PD  T ++VLSAC+  G ++ G  +   +ER +++   +    ++D+ ++ G
Sbjct: 238 GVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVELCNALIDMFAKCG 292


>ref|XP_004981445.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like isoform X1 [Setaria italica]
           gi|514813325|ref|XP_004981446.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g02980-like isoform X2 [Setaria italica]
           gi|514813327|ref|XP_004981447.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g02980-like isoform X3 [Setaria italica]
          Length = 605

 Score =  155 bits (393), Expect = 4e-36
 Identities = 83/172 (48%), Positives = 109/172 (63%)
 Frame = +2

Query: 2   EALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNS 181
           EAL +F +M+    K  P  VTV+SA+SA   LG+LEL + +H Y  KIGL+  V    +
Sbjct: 216 EALVLFREMQAKGLK--PTSVTVISALSACALLGALELGRWIHDYVRKIGLDSLVKVSTA 273

Query: 182 LIAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPD 361
           LI  YAKCGS+  AV VF  M  +D  +W+ MI A  +HG GREA+ ++  M K  + PD
Sbjct: 274 LIDMYAKCGSLEDAVAVFQGMESRDKQAWSVMIVAYANHGYGREAILLFEEMKKQGIKPD 333

Query: 362 STTFIAVLSACSHSGLVDEGIDIFESMERFDVVPEPKHYGCVVDLLSRAGHL 517
             TF+ VL ACSHSGLV EG+  F+ M+    +P  KHYGCV DLL+R+G L
Sbjct: 334 DITFLGVLYACSHSGLVSEGLQYFDDMKDNGTIPGIKHYGCVTDLLARSGQL 385



 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 52/171 (30%), Positives = 85/171 (49%)
 Frame = +2

Query: 5   ALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNSL 184
           A++VF   RM +  V P+  T VS + A     + E  +  HA A K+G   + + + +L
Sbjct: 116 AVRVF--ARMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHAVAAKVGAAGHEYVRPTL 173

Query: 185 IAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPDS 364
           I  YA+CG V  A  +FDRM    + S+ AMI A        EA+ ++  M    + P S
Sbjct: 174 INMYAECGDVRAARAMFDRMEGDCVVSYNAMIAAAVRSSRPGEALVLFREMQAKGLKPTS 233

Query: 365 TTFIAVLSACSHSGLVDEGIDIFESMERFDVVPEPKHYGCVVDLLSRAGHL 517
            T I+ LSAC+  G ++ G  I + + +  +    K    ++D+ ++ G L
Sbjct: 234 VTVISALSACALLGALELGRWIHDYVRKIGLDSLVKVSTALIDMYAKCGSL 284


>ref|XP_004300978.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 590

 Score =  155 bits (392), Expect = 5e-36
 Identities = 79/170 (46%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
 Frame = +2

Query: 17  FNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNSLIAGY 196
           F QM + + KV PN+ T+ + +SA   LG+L+L K +H YAE IG + NV+  N+LI  Y
Sbjct: 285 FKQM-LTESKVLPNDATLTTVLSACARLGALDLGKWVHVYAENIGYKRNVYVGNALIDMY 343

Query: 197 AKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPDSTTFI 376
           AKCG V  AV VF  M +KDL +W  +I  L +HG G +A++++S M    + PD  TFI
Sbjct: 344 AKCGGVDNAVDVFKNMEMKDLITWNTIICGLATHGRGGDALKLFSQMKSCKLKPDGITFI 403

Query: 377 AVLSACSHSGLVDEGIDIFESM-ERFDVVPEPKHYGCVVDLLSRAGHLAQ 523
            +L +C+H GLV++G+  F+SM   + +VP+ +HYGC+VDLL RAG L Q
Sbjct: 404 GILCSCTHLGLVEDGLSYFQSMVSDYSIVPQIEHYGCMVDLLGRAGLLEQ 453


>ref|XP_002316137.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222865177|gb|EEF02308.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 601

 Score =  155 bits (392), Expect = 5e-36
 Identities = 81/173 (46%), Positives = 114/173 (65%), Gaps = 1/173 (0%)
 Frame = +2

Query: 2   EALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNS 181
           EAL +F Q++    K+ PN+VTV+S +S+   LG+L+L K +H Y +K GL+  V    +
Sbjct: 211 EALSLFRQLQA--RKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTA 268

Query: 182 LIAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPD 361
           LI  YAKCGS+  A+ VF+ M V+D  +W+AMI A   HG G++ + ++  M +  V PD
Sbjct: 269 LIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPD 328

Query: 362 STTFIAVLSACSHSGLVDEGIDIFESM-ERFDVVPEPKHYGCVVDLLSRAGHL 517
             TF+ +L ACSH+GLVDEG   F SM E + ++P  KHYGC+VDLL RAG L
Sbjct: 329 EITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLL 381



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 46/172 (26%), Positives = 87/172 (50%)
 Frame = +2

Query: 2   EALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNS 181
           +A+ +F  ++  ++ + P++ T  S + A V   + +  K LH  A K+GL  N +   +
Sbjct: 110 KAISLF--IKALNYNLLPDDYTFPSLLKACVVAKAFQQGKQLHCLAIKLGLNENPYVCPT 167

Query: 182 LIAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPD 361
           LI  YA C  V  A +VFD +    + S+ A+IT         EA+ ++  +    + P+
Sbjct: 168 LINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSLFRQLQARKLKPN 227

Query: 362 STTFIAVLSACSHSGLVDEGIDIFESMERFDVVPEPKHYGCVVDLLSRAGHL 517
             T ++VLS+C+  G +D G  I E +++  +    K    ++D+ ++ G L
Sbjct: 228 DVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSL 279


>emb|CBI33742.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score =  155 bits (391), Expect = 7e-36
 Identities = 79/175 (45%), Positives = 115/175 (65%), Gaps = 1/175 (0%)
 Frame = +2

Query: 2   EALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNS 181
           EAL +F   RM   K  PNEVTV+S +SA   LG+LE  + +H+Y E  G++ NV    +
Sbjct: 173 EALVLFR--RMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTA 230

Query: 182 LIAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPD 361
           L+  Y+KCGS+  A  VFD++  KD+ +W +MI     HG  +EA++++ +MC+M + P 
Sbjct: 231 LVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPT 290

Query: 362 STTFIAVLSACSHSGLVDEGIDIFESM-ERFDVVPEPKHYGCVVDLLSRAGHLAQ 523
           + TFI +LSAC HSG V EG DIF  M + + + P+ +HYGC+V+LL RAGH+ Q
Sbjct: 291 NITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQ 345


>ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  155 bits (391), Expect = 7e-36
 Identities = 79/175 (45%), Positives = 115/175 (65%), Gaps = 1/175 (0%)
 Frame = +2

Query: 2   EALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNS 181
           EAL +F   RM   K  PNEVTV+S +SA   LG+LE  + +H+Y E  G++ NV    +
Sbjct: 239 EALVLFR--RMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTA 296

Query: 182 LIAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSHGLGREAVEVYSTMCKMNVLPD 361
           L+  Y+KCGS+  A  VFD++  KD+ +W +MI     HG  +EA++++ +MC+M + P 
Sbjct: 297 LVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPT 356

Query: 362 STTFIAVLSACSHSGLVDEGIDIFESM-ERFDVVPEPKHYGCVVDLLSRAGHLAQ 523
           + TFI +LSAC HSG V EG DIF  M + + + P+ +HYGC+V+LL RAGH+ Q
Sbjct: 357 NITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQ 411



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 31/203 (15%)
 Frame = +2

Query: 2   EALKVFNQMRMFDHKVCPNEVTVVSAMSAFVGLGSLELVKSLHAYAEKIGLEINVFFQNS 181
           +AL  + QM      V PN  T     S+ + L  +E  K+LH+ A K+G + +++ +  
Sbjct: 111 QALNFYAQM--LTQGVEPNAFT----FSSILKLCPIEPGKALHSQAVKLGFDSDLYVRTG 164

Query: 182 LIAGYAKCGSVACAVQVFDRMGVKDLHSWTAMITALGSH--------------------- 298
           L+  YA+ G V  A Q+FD M  K L S TAM+T    H                     
Sbjct: 165 LLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCW 224

Query: 299 ----------GLGREAVEVYSTMCKMNVLPDSTTFIAVLSACSHSGLVDEGIDIFESMER 448
                     G+  EA+ ++  M K    P+  T ++VLSAC   G ++ G  +   +E 
Sbjct: 225 NVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIEN 284

Query: 449 FDVVPEPKHYGCVVDLLSRAGHL 517
             +         +VD+ S+ G L
Sbjct: 285 NGIQFNVHVGTALVDMYSKCGSL 307