BLASTX nr result
ID: Zingiber25_contig00044370
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00044370
(381 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006604739.1| PREDICTED: DNA mismatch repair protein MSH6-... 101 1e-19
ref|XP_006492326.1| PREDICTED: DNA mismatch repair protein MSH6-... 98 1e-18
ref|XP_006444483.1| hypothetical protein CICLE_v10018525mg [Citr... 98 1e-18
emb|CBI36942.3| unnamed protein product [Vitis vinifera] 97 2e-18
ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein Msh6-... 97 2e-18
emb|CAN78918.1| hypothetical protein VITISV_032225 [Vitis vinifera] 97 2e-18
ref|XP_004136154.1| PREDICTED: DNA mismatch repair protein MSH6-... 96 4e-18
ref|XP_004494416.1| PREDICTED: DNA mismatch repair protein MSH6-... 92 6e-17
gb|EXB28598.1| DNA mismatch repair protein Msh6-1 [Morus notabilis] 92 9e-17
ref|XP_006349194.1| PREDICTED: DNA mismatch repair protein MSH6-... 92 9e-17
gb|EOX95247.1| MUTS isoform 2 [Theobroma cacao] 91 1e-16
gb|EOX95246.1| MUTS isoform 1 [Theobroma cacao] 91 1e-16
ref|XP_004229397.1| PREDICTED: DNA mismatch repair protein MSH6-... 91 2e-16
ref|XP_002515294.1| ATP binding protein, putative [Ricinus commu... 90 3e-16
gb|AAT67045.1| DNA mismatch repair protein [Petunia x hybrida] 89 6e-16
ref|XP_006396405.1| hypothetical protein EUTSA_v10028364mg [Eutr... 88 1e-15
gb|ESW35166.1| hypothetical protein PHAVU_001G212500g [Phaseolus... 87 3e-15
ref|XP_003576514.1| PREDICTED: DNA mismatch repair protein Msh6-... 86 5e-15
ref|XP_006286904.1| hypothetical protein CARUB_v10000048mg [Caps... 86 7e-15
ref|XP_006286903.1| hypothetical protein CARUB_v10000048mg [Caps... 86 7e-15
>ref|XP_006604739.1| PREDICTED: DNA mismatch repair protein MSH6-like [Glycine max]
Length = 1273
Score = 101 bits (251), Expect = 1e-19
Identities = 45/70 (64%), Positives = 58/70 (82%), Gaps = 1/70 (1%)
Frame = -2
Query: 350 GANT-PPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLYDDGEDEAL 174
GA+T PPSA+ S + ++++GRRIKV+WPLDK WYEG V SFD+L KH+V YDDGE+E+L
Sbjct: 72 GASTSPPSASPSLYFQELIGRRIKVYWPLDKAWYEGSVKSFDSLTSKHVVRYDDGEEESL 131
Query: 173 DLSSEKFEWV 144
DLS EK EW+
Sbjct: 132 DLSKEKIEWL 141
>ref|XP_006492326.1| PREDICTED: DNA mismatch repair protein MSH6-like [Citrus sinensis]
Length = 1288
Score = 98.2 bits (243), Expect = 1e-18
Identities = 48/79 (60%), Positives = 55/79 (69%)
Frame = -2
Query: 380 RLVISPSSSPGANTPPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVL 201
RLVI + SP +TP AA + EDV+ +RI+V+WPLDK WYEG V SFD KHLV
Sbjct: 81 RLVIGQTPSPPPSTP--AAAKSYGEDVLRKRIRVYWPLDKAWYEGCVKSFDKECNKHLVQ 138
Query: 200 YDDGEDEALDLSSEKFEWV 144
YDDGEDE LDL EK EWV
Sbjct: 139 YDDGEDELLDLGKEKIEWV 157
>ref|XP_006444483.1| hypothetical protein CICLE_v10018525mg [Citrus clementina]
gi|557546745|gb|ESR57723.1| hypothetical protein
CICLE_v10018525mg [Citrus clementina]
Length = 1288
Score = 98.2 bits (243), Expect = 1e-18
Identities = 48/79 (60%), Positives = 55/79 (69%)
Frame = -2
Query: 380 RLVISPSSSPGANTPPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVL 201
RLVI + SP +TP AA + EDV+ +RI+V+WPLDK WYEG V SFD KHLV
Sbjct: 81 RLVIGQTPSPPPSTP--AAAKSYGEDVLRKRIRVYWPLDKAWYEGCVKSFDKECNKHLVQ 138
Query: 200 YDDGEDEALDLSSEKFEWV 144
YDDGEDE LDL EK EWV
Sbjct: 139 YDDGEDELLDLGKEKIEWV 157
>emb|CBI36942.3| unnamed protein product [Vitis vinifera]
Length = 1237
Score = 97.1 bits (240), Expect = 2e-18
Identities = 45/78 (57%), Positives = 56/78 (71%)
Frame = -2
Query: 377 LVISPSSSPGANTPPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLY 198
LVI PS + +TP + +KS + E+VV RR+KV+WPLDK WY G V SFD L G+HLV Y
Sbjct: 42 LVIGPSKTTSPSTPVTGSKS-YGEEVVNRRVKVYWPLDKSWYVGCVKSFDELTGEHLVQY 100
Query: 197 DDGEDEALDLSSEKFEWV 144
DD ++E LDL EK EWV
Sbjct: 101 DDADEETLDLGKEKIEWV 118
>ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Vitis vinifera]
Length = 1297
Score = 97.1 bits (240), Expect = 2e-18
Identities = 45/78 (57%), Positives = 56/78 (71%)
Frame = -2
Query: 377 LVISPSSSPGANTPPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLY 198
LVI PS + +TP + +KS + E+VV RR+KV+WPLDK WY G V SFD L G+HLV Y
Sbjct: 72 LVIGPSKTTSPSTPVTGSKS-YGEEVVNRRVKVYWPLDKSWYVGCVKSFDELTGEHLVQY 130
Query: 197 DDGEDEALDLSSEKFEWV 144
DD ++E LDL EK EWV
Sbjct: 131 DDADEETLDLGKEKIEWV 148
>emb|CAN78918.1| hypothetical protein VITISV_032225 [Vitis vinifera]
Length = 1349
Score = 97.1 bits (240), Expect = 2e-18
Identities = 45/78 (57%), Positives = 56/78 (71%)
Frame = -2
Query: 377 LVISPSSSPGANTPPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLY 198
LVI PS + +TP + +KS + E+VV RR+KV+WPLDK WY G V SFD L G+HLV Y
Sbjct: 80 LVIGPSKTTSPSTPVTGSKS-YGEEVVNRRVKVYWPLDKSWYVGCVKSFDELTGEHLVQY 138
Query: 197 DDGEDEALDLSSEKFEWV 144
DD ++E LDL EK EWV
Sbjct: 139 DDADEETLDLGKEKIEWV 156
>ref|XP_004136154.1| PREDICTED: DNA mismatch repair protein MSH6-like [Cucumis sativus]
Length = 1307
Score = 96.3 bits (238), Expect = 4e-18
Identities = 42/73 (57%), Positives = 53/73 (72%)
Frame = -2
Query: 362 SSSPGANTPPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLYDDGED 183
SSSPG+++ P A + + V+G++IKV+WPLDK WYEGRV FD GKHLV YDD E+
Sbjct: 78 SSSPGSSSLPDAEEKSHGDGVIGKKIKVYWPLDKTWYEGRVKMFDEKAGKHLVQYDDAEE 137
Query: 182 EALDLSSEKFEWV 144
E L L +EK EWV
Sbjct: 138 ELLVLGNEKIEWV 150
>ref|XP_004494416.1| PREDICTED: DNA mismatch repair protein MSH6-like [Cicer arietinum]
Length = 1301
Score = 92.4 bits (228), Expect = 6e-17
Identities = 41/78 (52%), Positives = 55/78 (70%)
Frame = -2
Query: 377 LVISPSSSPGANTPPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLY 198
L+I S +P PS + S F++ V+G+RIKV+WP+D WYEG V SFD L KH + Y
Sbjct: 75 LIIGASPTP---PQPSPSPSPFADQVIGKRIKVYWPIDDAWYEGFVKSFDKLTSKHRIHY 131
Query: 197 DDGEDEALDLSSEKFEWV 144
DD E+E++DLS EKFEW+
Sbjct: 132 DDDEEESIDLSKEKFEWI 149
>gb|EXB28598.1| DNA mismatch repair protein Msh6-1 [Morus notabilis]
Length = 1302
Score = 91.7 bits (226), Expect = 9e-17
Identities = 43/79 (54%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Frame = -2
Query: 377 LVISPSSSPGANTPPSAAKSGF-SEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVL 201
L++ +SP + +P + A F E+VVG+RIKV+WPLDK WYEG V SFD GKHLV
Sbjct: 81 LLVIGGASPLSLSPLTPASEKFHGEEVVGKRIKVYWPLDKSWYEGFVRSFDKDSGKHLVQ 140
Query: 200 YDDGEDEALDLSSEKFEWV 144
YDDGE+E+++L+ EK EW+
Sbjct: 141 YDDGEEESVELAKEKIEWI 159
>ref|XP_006349194.1| PREDICTED: DNA mismatch repair protein MSH6-like [Solanum
tuberosum]
Length = 1308
Score = 91.7 bits (226), Expect = 9e-17
Identities = 45/93 (48%), Positives = 61/93 (65%), Gaps = 17/93 (18%)
Frame = -2
Query: 371 ISPSSSPGAN-------------TPPSAA----KSGFSEDVVGRRIKVFWPLDKVWYEGR 243
+SPS+SP A+ T P +A K + ++VV +R+KV+WPLDK+WYEG
Sbjct: 58 LSPSTSPCASPTTPSPLNAKRKITVPISAIVDLKPSYGQEVVDKRVKVYWPLDKIWYEGC 117
Query: 242 VSSFDALQGKHLVLYDDGEDEALDLSSEKFEWV 144
V SFD+ G+HLV YDDG++E +DLS EK EWV
Sbjct: 118 VKSFDSSSGEHLVKYDDGDEEMIDLSEEKIEWV 150
>gb|EOX95247.1| MUTS isoform 2 [Theobroma cacao]
Length = 1118
Score = 91.3 bits (225), Expect = 1e-16
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = -2
Query: 377 LVISPSSSPGANTPPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLY 198
LVI + SP TP + A + ++VV +RI+V+WPLDK WYEG V SFD G+HLV Y
Sbjct: 77 LVIGQTPSP---TPSTPADKSYGKEVVDKRIRVYWPLDKAWYEGVVKSFDKESGRHLVQY 133
Query: 197 DDGEDEALDLSSEKFEWV 144
DD E+E LDL EK EW+
Sbjct: 134 DDAEEEELDLGKEKIEWI 151
>gb|EOX95246.1| MUTS isoform 1 [Theobroma cacao]
Length = 1316
Score = 91.3 bits (225), Expect = 1e-16
Identities = 42/78 (53%), Positives = 53/78 (67%)
Frame = -2
Query: 377 LVISPSSSPGANTPPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLY 198
LVI + SP TP + A + ++VV +RI+V+WPLDK WYEG V SFD G+HLV Y
Sbjct: 77 LVIGQTPSP---TPSTPADKSYGKEVVDKRIRVYWPLDKAWYEGVVKSFDKESGRHLVQY 133
Query: 197 DDGEDEALDLSSEKFEWV 144
DD E+E LDL EK EW+
Sbjct: 134 DDAEEEELDLGKEKIEWI 151
>ref|XP_004229397.1| PREDICTED: DNA mismatch repair protein MSH6-like [Solanum
lycopersicum]
Length = 1312
Score = 90.5 bits (223), Expect = 2e-16
Identities = 41/79 (51%), Positives = 56/79 (70%), Gaps = 4/79 (5%)
Frame = -2
Query: 368 SPSSSPGANTPPSAA----KSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVL 201
SP S+ T P +A K + ++VV +R+KV+WPLDK+WYEG V SFD+ G+HLV
Sbjct: 75 SPLSAKRKITVPISAVVDLKPSYGQEVVDKRVKVYWPLDKIWYEGCVKSFDSSSGEHLVK 134
Query: 200 YDDGEDEALDLSSEKFEWV 144
YDDG++E +DL+ EK EWV
Sbjct: 135 YDDGDEEMIDLAEEKIEWV 153
>ref|XP_002515294.1| ATP binding protein, putative [Ricinus communis]
gi|223545774|gb|EEF47278.1| ATP binding protein,
putative [Ricinus communis]
Length = 1306
Score = 90.1 bits (222), Expect = 3e-16
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = -2
Query: 368 SPSSSPGANTPPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLYDDG 189
+P+ SP + P A S F ++VV +R+KV+WPLDK WYEG V S+D GKHLV YDD
Sbjct: 86 TPTPSPSPSMPRVMANS-FGKEVVEKRVKVYWPLDKTWYEGCVKSYDEDSGKHLVQYDDF 144
Query: 188 EDEALDLSSEKFEWV 144
E+E LDL +EK EWV
Sbjct: 145 EEEVLDLGNEKIEWV 159
>gb|AAT67045.1| DNA mismatch repair protein [Petunia x hybrida]
Length = 1303
Score = 89.0 bits (219), Expect = 6e-16
Identities = 37/65 (56%), Positives = 48/65 (73%)
Frame = -2
Query: 338 PPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLYDDGEDEALDLSSE 159
P K + ++VV +R+KV+WPLDK WYEG V SFD+ GKHLV YDDGE+E ++L+ E
Sbjct: 75 PTLVLKKSYGQEVVDKRVKVYWPLDKNWYEGFVKSFDSASGKHLVEYDDGEEEMIELAEE 134
Query: 158 KFEWV 144
K EWV
Sbjct: 135 KIEWV 139
>ref|XP_006396405.1| hypothetical protein EUTSA_v10028364mg [Eutrema salsugineum]
gi|557097422|gb|ESQ37858.1| hypothetical protein
EUTSA_v10028364mg [Eutrema salsugineum]
Length = 1336
Score = 87.8 bits (216), Expect = 1e-15
Identities = 34/65 (52%), Positives = 53/65 (81%)
Frame = -2
Query: 341 TPPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLYDDGEDEALDLSS 162
+PP +A + + ++VVG++++V+WPLDK WY+G V+S++ +GKH+V YDDGE+E+LDL
Sbjct: 111 SPPKSAGNTYGDEVVGKQVRVYWPLDKKWYDGIVTSYNKGEGKHVVEYDDGEEESLDLGK 170
Query: 161 EKFEW 147
EK EW
Sbjct: 171 EKIEW 175
>gb|ESW35166.1| hypothetical protein PHAVU_001G212500g [Phaseolus vulgaris]
Length = 1291
Score = 86.7 bits (213), Expect = 3e-15
Identities = 39/67 (58%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -2
Query: 341 TPPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLY-DDGEDEALDLS 165
+PPSA+ S + ++VVG+RIKV+WPLDK WYEG + SFD KH+V Y DD E+E+L+LS
Sbjct: 80 SPPSASSSLYGKEVVGQRIKVYWPLDKAWYEGSIISFDKNTSKHVVRYFDDEEEESLNLS 139
Query: 164 SEKFEWV 144
EK EW+
Sbjct: 140 EEKIEWL 146
>ref|XP_003576514.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Brachypodium
distachyon]
Length = 1318
Score = 85.9 bits (211), Expect = 5e-15
Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 13/89 (14%)
Frame = -2
Query: 374 VISPSSSPGANTPPSAAKSGFSED-------------VVGRRIKVFWPLDKVWYEGRVSS 234
++ PS SP + PP+ + G E+ VGRR++V+WPLD WYEGRV
Sbjct: 83 LVVPSPSPPKSAPPAPQQQGQDEEKKEQNASAAPAGEAVGRRLRVYWPLDDAWYEGRVDD 142
Query: 233 FDALQGKHLVLYDDGEDEALDLSSEKFEW 147
+D +H V YDDGEDE +DL EKFEW
Sbjct: 143 YDEGSRRHRVKYDDGEDEEVDLRKEKFEW 171
>ref|XP_006286904.1| hypothetical protein CARUB_v10000048mg [Capsella rubella]
gi|482555610|gb|EOA19802.1| hypothetical protein
CARUB_v10000048mg [Capsella rubella]
Length = 1325
Score = 85.5 bits (210), Expect = 7e-15
Identities = 34/66 (51%), Positives = 52/66 (78%)
Frame = -2
Query: 341 TPPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLYDDGEDEALDLSS 162
+PP +A+ + ++VVGR+++V+WPLDK WY+G V+ +D GKH+V Y+DGE+E+LDL
Sbjct: 109 SPPLSAEIKYGDEVVGRQVRVYWPLDKRWYDGSVTFYDKGVGKHVVEYEDGEEESLDLGK 168
Query: 161 EKFEWV 144
EK EW+
Sbjct: 169 EKIEWM 174
>ref|XP_006286903.1| hypothetical protein CARUB_v10000048mg [Capsella rubella]
gi|482555609|gb|EOA19801.1| hypothetical protein
CARUB_v10000048mg [Capsella rubella]
Length = 1325
Score = 85.5 bits (210), Expect = 7e-15
Identities = 34/66 (51%), Positives = 52/66 (78%)
Frame = -2
Query: 341 TPPSAAKSGFSEDVVGRRIKVFWPLDKVWYEGRVSSFDALQGKHLVLYDDGEDEALDLSS 162
+PP +A+ + ++VVGR+++V+WPLDK WY+G V+ +D GKH+V Y+DGE+E+LDL
Sbjct: 109 SPPLSAEIKYGDEVVGRQVRVYWPLDKRWYDGSVTFYDKGVGKHVVEYEDGEEESLDLGK 168
Query: 161 EKFEWV 144
EK EW+
Sbjct: 169 EKIEWM 174