BLASTX nr result
ID: Zingiber25_contig00044290
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00044290
(279 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis tha... 47 1e-08
emb|CAN72673.1| hypothetical protein VITISV_024842 [Vitis vinifera] 49 1e-08
emb|CAN73909.1| hypothetical protein VITISV_029162 [Vitis vinifera] 42 2e-08
emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera] 42 4e-08
gb|AAC02666.1| polyprotein [Arabidopsis thaliana] 41 9e-08
gb|AAC02664.1| polyprotein [Arabidopsis thaliana] 41 9e-08
gb|AAC02669.1| polyprotein [Arabidopsis thaliana] 41 9e-08
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera] 44 9e-08
emb|CAN69370.1| hypothetical protein VITISV_010057 [Vitis vinifera] 42 9e-08
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana] 44 3e-07
gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana] 40 6e-07
gb|AAD22324.1| putative retroelement pol polyprotein [Arabidopsi... 42 8e-07
gb|ABW81116.1| putative gag-pol polyprotein [Boechera divaricarpa] 41 8e-07
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana] 42 9e-07
dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana] 42 9e-07
dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana] 42 9e-07
dbj|BAM42646.1| polyprotein [Arabidopsis thaliana] 42 9e-07
gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidops... 42 9e-07
dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|... 42 9e-07
dbj|BAM44535.1| polyprotein [Arabidopsis thaliana] 42 1e-06
>gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis thaliana]
gi|225898008|dbj|BAH30336.1| hypothetical protein
[Arabidopsis thaliana]
Length = 1459
Score = 47.0 bits (110), Expect(2) = 1e-08
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = +3
Query: 150 LQVIHISIDDQLADALTKSLSRPRLFAICNKIGIISRTPS 269
L+V H+S +DQLADALTKSLSRP + +KIG+ PS
Sbjct: 1420 LRVSHVSTNDQLADALTKSLSRPHFLSARSKIGVRQLPPS 1459
Score = 37.7 bits (86), Expect(2) = 1e-08
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = +2
Query: 5 VACSSTEVEYRVFASAVTEIQ*IKSVLTNLLLPIITSVVLFTDNLG 142
V+ SSTE EYR A+A +EI+ + S+LT L + + +F DN+G
Sbjct: 1342 VSRSSTESEYRAVANAASEIRWLCSLLTELHIRLPHGPTIFCDNIG 1387
>emb|CAN72673.1| hypothetical protein VITISV_024842 [Vitis vinifera]
Length = 433
Score = 48.9 bits (115), Expect(2) = 1e-08
Identities = 25/47 (53%), Positives = 35/47 (74%)
Frame = +2
Query: 2 TVACSSTEVEYRVFASAVTEIQ*IKSVLTNLLLPIITSVVLFTDNLG 142
T+A SSTEVEYR FAS ++EI I S+LT L + + T +V++ DN+G
Sbjct: 315 TIARSSTEVEYRSFASTISEINWICSLLTELGVTLPTPLVIYCDNVG 361
Score = 35.8 bits (81), Expect(2) = 1e-08
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +3
Query: 150 LQVIHISIDDQLADALTKSLSRPRLFAICNKIGIISRTP 266
L+V H+S DQL D LTK L R R + KIGI S P
Sbjct: 394 LRVTHVSSTDQLVDTLTKLLPRSRFQELRVKIGIPSVAP 432
>emb|CAN73909.1| hypothetical protein VITISV_029162 [Vitis vinifera]
Length = 569
Score = 42.4 bits (98), Expect(2) = 2e-08
Identities = 24/47 (51%), Positives = 31/47 (65%)
Frame = +2
Query: 2 TVACSSTEVEYRVFASAVTEIQ*IKSVLTNLLLPIITSVVLFTDNLG 142
TVA SSTEVEYR AS EI+ I S+LT L + + V++ DN+G
Sbjct: 440 TVARSSTEVEYRSVASTAAEIRWICSLLTELGVTLPQQPVIYCDNVG 486
Score = 42.0 bits (97), Expect(2) = 2e-08
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +3
Query: 150 LQVIHISIDDQLADALTKSLSRPRLFAICNKIGIISR 260
L+V HIS DQLADALTK L+RP+ ++ KIG+ R
Sbjct: 519 LRVSHISASDQLADALTKPLARPQFNSLKAKIGLAPR 555
>emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]
Length = 478
Score = 42.0 bits (97), Expect(2) = 4e-08
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +3
Query: 150 LQVIHISIDDQLADALTKSLSRPRLFAICNKIGIISR 260
L+V HIS DQLADALTK L+RP+ ++ KIG+ R
Sbjct: 428 LRVSHISASDQLADALTKPLARPQFDSLKAKIGLAPR 464
Score = 40.8 bits (94), Expect(2) = 4e-08
Identities = 23/47 (48%), Positives = 30/47 (63%)
Frame = +2
Query: 2 TVACSSTEVEYRVFASAVTEIQ*IKSVLTNLLLPIITSVVLFTDNLG 142
TVA SSTE EYR AS EI+ I S+LT L + + V++ DN+G
Sbjct: 349 TVARSSTEAEYRSVASTAAEIRWICSLLTELGVTLPQQPVIYCDNVG 395
>gb|AAC02666.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 40.8 bits (94), Expect(2) = 9e-08
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = +2
Query: 5 VACSSTEVEYRVFASAVTEIQ*IKSVLTNLLLPIITSVVLFTDNLG 142
VA SSTE EYR A+A +EI+ + S+LT L + + + V++ DN+G
Sbjct: 1334 VARSSTEAEYRAVANATSEIRWVCSLLTELGITLSSPPVVYCDNVG 1379
Score = 40.8 bits (94), Expect(2) = 9e-08
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +3
Query: 150 LQVIHISIDDQLADALTKSLSRPRLFAICNKIGIISRTPS 269
L+V H+S DQLADALTK L R + +KIG+ PS
Sbjct: 1412 LRVTHVSTKDQLADALTKPLPRQPFTTLISKIGVAKAPPS 1451
>gb|AAC02664.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 40.8 bits (94), Expect(2) = 9e-08
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = +2
Query: 5 VACSSTEVEYRVFASAVTEIQ*IKSVLTNLLLPIITSVVLFTDNLG 142
VA SSTE EYR A+A +EI+ + S+LT L + + + V++ DN+G
Sbjct: 1334 VARSSTEAEYRAVANATSEIRWVCSLLTELGITLSSPPVVYCDNVG 1379
Score = 40.8 bits (94), Expect(2) = 9e-08
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +3
Query: 150 LQVIHISIDDQLADALTKSLSRPRLFAICNKIGIISRTPS 269
L+V H+S DQLADALTK L R + +KIG+ PS
Sbjct: 1412 LRVTHVSTKDQLADALTKPLPRQPFTTLISKIGVAKAPPS 1451
>gb|AAC02669.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 40.8 bits (94), Expect(2) = 9e-08
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = +2
Query: 5 VACSSTEVEYRVFASAVTEIQ*IKSVLTNLLLPIITSVVLFTDNLG 142
VA SSTE EYR A+A +EI+ + S+LT L + + + V++ DN+G
Sbjct: 1334 VARSSTEAEYRAVANATSEIRWVCSLLTELGITLSSPPVVYCDNVG 1379
Score = 40.8 bits (94), Expect(2) = 9e-08
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +3
Query: 150 LQVIHISIDDQLADALTKSLSRPRLFAICNKIGIISRTPS 269
L+V H+S DQLADALTK L R + +KIG+ PS
Sbjct: 1412 LRVTHVSTKDQLADALTKPLPRQPFTTLISKIGVAKAPPS 1451
>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
Length = 1172
Score = 43.9 bits (102), Expect(2) = 9e-08
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +3
Query: 150 LQVIHISIDDQLADALTKSLSRPRLFAICNKIGIISRTPS 269
L+V H+S DQLAD LTKSL R R + +KIG+ R PS
Sbjct: 1133 LRVAHVSSTDQLADLLTKSLPRARFLFLRDKIGLSCRAPS 1172
Score = 37.7 bits (86), Expect(2) = 9e-08
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +2
Query: 5 VACSSTEVEYRVFASAVTEIQ*IKSVLTNLLLPIITSVVLFTDNLG 142
+A SSTE EYR A+ E+ + S+L +L + + T V++ DN+G
Sbjct: 1055 IARSSTEAEYRFVANTAAELNWVSSLLCDLGIQLPTCPVIYCDNVG 1100
>emb|CAN69370.1| hypothetical protein VITISV_010057 [Vitis vinifera]
Length = 591
Score = 41.6 bits (96), Expect(2) = 9e-08
Identities = 23/47 (48%), Positives = 30/47 (63%)
Frame = +2
Query: 2 TVACSSTEVEYRVFASAVTEIQ*IKSVLTNLLLPIITSVVLFTDNLG 142
TVA SSTE EYR AS EI+ I S+LT L + + V++ DN+G
Sbjct: 462 TVARSSTEAEYRTVASTAAEIRWICSLLTELGVTLPQQPVIYCDNVG 508
Score = 40.0 bits (92), Expect(2) = 9e-08
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +3
Query: 150 LQVIHISIDDQLADALTKSLSRPRLFAICNKIGIISR 260
L+V HIS +QL DALTK L+RPR ++ KIG+ R
Sbjct: 541 LRVSHISASNQLVDALTKPLARPRFDSLKAKIGLAPR 577
>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
Length = 1429
Score = 43.9 bits (102), Expect(2) = 3e-07
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +3
Query: 150 LQVIHISIDDQLADALTKSLSRPRLFAICNKIGIISRTPS 269
L+V H+S DQLADALTK L RPR + +KIG+ PS
Sbjct: 1390 LRVSHVSTKDQLADALTKPLPRPRFTELNSKIGVQELPPS 1429
Score = 35.8 bits (81), Expect(2) = 3e-07
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +2
Query: 2 TVACSSTEVEYRVFASAVTEIQ*IKSVLTNLLLPIITSVVLFTDNLG 142
+VA SSTE EYR A+ +E++ + S+L + + T V++ DN+G
Sbjct: 1311 SVARSSTEAEYRAVANTASELRWLCSLLLEMGISQTTVPVIYCDNIG 1357
>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
Length = 1534
Score = 40.4 bits (93), Expect(2) = 6e-07
Identities = 21/40 (52%), Positives = 24/40 (60%)
Frame = +3
Query: 150 LQVIHISIDDQLADALTKSLSRPRLFAICNKIGIISRTPS 269
L+V HIS DQLADALTK L R +KIG+ PS
Sbjct: 1495 LRVSHISTHDQLADALTKPLPRQHFLQFSSKIGVSKLPPS 1534
Score = 38.5 bits (88), Expect(2) = 6e-07
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = +2
Query: 5 VACSSTEVEYRVFASAVTEIQ*IKSVLTNLLLPIITSVVLFTDNLG 142
VA SSTE EYR A+ +EI+ + S+LT L + + V++ DN+G
Sbjct: 1417 VARSSTEAEYRAVANTTSEIRWVCSLLTELGITLPKMPVIYCDNVG 1462
>gb|AAD22324.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 387
Score = 42.0 bits (97), Expect(2) = 8e-07
Identities = 22/40 (55%), Positives = 26/40 (65%)
Frame = +3
Query: 150 LQVIHISIDDQLADALTKSLSRPRLFAICNKIGIISRTPS 269
L+V H+S DQLADALTK L RPR + KIG+ PS
Sbjct: 348 LRVSHLSTKDQLADALTKPLHRPRFQELNYKIGVKELPPS 387
Score = 36.6 bits (83), Expect(2) = 8e-07
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 14 SSTEVEYRVFASAVTEIQ*IKSVLTNLLLPIITSVVLFTDNLG 142
SSTE EYR A+ +E+Q I S+L+ + + + + V++ DN+G
Sbjct: 273 SSTEAEYRAVANTASELQWICSLLSEMGISLPVAPVVYCDNMG 315
>gb|ABW81116.1| putative gag-pol polyprotein [Boechera divaricarpa]
Length = 216
Score = 41.2 bits (95), Expect(2) = 8e-07
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = +3
Query: 150 LQVIHISIDDQLADALTKSLSRPRLFAICNKIGIISRTPS 269
L+V H+S DQLADALTK L RPR I +K+ + P+
Sbjct: 177 LRVTHVSTHDQLADALTKPLPRPRFSQITSKLRVTIAPPA 216
Score = 37.4 bits (85), Expect(2) = 8e-07
Identities = 19/46 (41%), Positives = 31/46 (67%)
Frame = +2
Query: 5 VACSSTEVEYRVFASAVTEIQ*IKSVLTNLLLPIITSVVLFTDNLG 142
VA SSTE EYR A+ +E+ I S+L+ L + + ++ V++ DN+G
Sbjct: 99 VARSSTEAEYRAVANTASELCWICSLLSELYVTLPSTPVIYCDNVG 144
>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 41.6 bits (96), Expect(2) = 9e-07
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = +3
Query: 150 LQVIHISIDDQLADALTKSLSRPRLFAICNKIGIISRTPS 269
L+V+H+S DQLAD LTK LSR KIG+I PS
Sbjct: 1429 LRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGVIKVPPS 1468
Score = 36.6 bits (83), Expect(2) = 9e-07
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +2
Query: 5 VACSSTEVEYRVFASAVTEIQ*IKSVLTNLLLPIITSVVLFTDNLG 142
V SSTE EYR A+ +E+Q I S+LT L + + V++ DN+G
Sbjct: 1351 VVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVG 1396
>dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 41.6 bits (96), Expect(2) = 9e-07
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = +3
Query: 150 LQVIHISIDDQLADALTKSLSRPRLFAICNKIGIISRTPS 269
L+V+H+S DQLAD LTK LSR KIG+I PS
Sbjct: 1429 LRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGVIKVPPS 1468
Score = 36.6 bits (83), Expect(2) = 9e-07
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +2
Query: 5 VACSSTEVEYRVFASAVTEIQ*IKSVLTNLLLPIITSVVLFTDNLG 142
V SSTE EYR A+ +E+Q I S+LT L + + V++ DN+G
Sbjct: 1351 VVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVG 1396
>dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 41.6 bits (96), Expect(2) = 9e-07
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = +3
Query: 150 LQVIHISIDDQLADALTKSLSRPRLFAICNKIGIISRTPS 269
L+V+H+S DQLAD LTK LSR KIG+I PS
Sbjct: 1429 LRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGVIKVPPS 1468
Score = 36.6 bits (83), Expect(2) = 9e-07
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +2
Query: 5 VACSSTEVEYRVFASAVTEIQ*IKSVLTNLLLPIITSVVLFTDNLG 142
V SSTE EYR A+ +E+Q I S+LT L + + V++ DN+G
Sbjct: 1351 VVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVG 1396
>dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 41.6 bits (96), Expect(2) = 9e-07
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = +3
Query: 150 LQVIHISIDDQLADALTKSLSRPRLFAICNKIGIISRTPS 269
L+V+H+S DQLAD LTK LSR KIG+I PS
Sbjct: 1429 LRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGVIKVPPS 1468
Score = 36.6 bits (83), Expect(2) = 9e-07
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +2
Query: 5 VACSSTEVEYRVFASAVTEIQ*IKSVLTNLLLPIITSVVLFTDNLG 142
V SSTE EYR A+ +E+Q I S+LT L + + V++ DN+G
Sbjct: 1351 VVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVG 1396
>gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidopsis thaliana]
gi|7269781|emb|CAB77781.1| putative polyprotein of LTR
transposon [Arabidopsis thaliana]
Length = 1456
Score = 41.6 bits (96), Expect(2) = 9e-07
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = +3
Query: 150 LQVIHISIDDQLADALTKSLSRPRLFAICNKIGIISRTPS 269
L+V+H+S DQLAD LTK LSR KIG+I PS
Sbjct: 1410 LRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGVIKVPPS 1449
Score = 36.6 bits (83), Expect(2) = 9e-07
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +2
Query: 5 VACSSTEVEYRVFASAVTEIQ*IKSVLTNLLLPIITSVVLFTDNLG 142
V SSTE EYR A+ +E+Q I S+LT L + + V++ DN+G
Sbjct: 1332 VVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVG 1377
>dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|dbj|BAM44533.1|
polyprotein [Arabidopsis thaliana]
Length = 1330
Score = 41.6 bits (96), Expect(2) = 9e-07
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = +3
Query: 150 LQVIHISIDDQLADALTKSLSRPRLFAICNKIGIISRTPS 269
L+V+H+S DQLAD LTK LSR KIG+I PS
Sbjct: 1284 LRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGVIKVPPS 1323
Score = 36.6 bits (83), Expect(2) = 9e-07
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +2
Query: 5 VACSSTEVEYRVFASAVTEIQ*IKSVLTNLLLPIITSVVLFTDNLG 142
V SSTE EYR A+ +E+Q I S+LT L + + V++ DN+G
Sbjct: 1206 VVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVG 1251
>dbj|BAM44535.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 41.6 bits (96), Expect(2) = 1e-06
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = +3
Query: 150 LQVIHISIDDQLADALTKSLSRPRLFAICNKIGIISRTPS 269
L+V+H+S DQLAD LTK LSR KIG+I PS
Sbjct: 1429 LRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGVIKVPPS 1468
Score = 36.2 bits (82), Expect(2) = 1e-06
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +2
Query: 5 VACSSTEVEYRVFASAVTEIQ*IKSVLTNLLLPIITSVVLFTDNLG 142
V SSTE EYR A+ +E+Q I S+LT L + + V++ DN+G
Sbjct: 1351 VVRSSTEAEYRSVANISSELQWICSLLTELGIQLSHPSVIYCDNVG 1396