BLASTX nr result

ID: Zingiber25_contig00044234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00044234
         (267 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF21695.1| NBS-type resistance protein RGC5 [Musa acuminata ...    79   8e-13
gb|ABY75805.1| resistance gene candidate NBS-type protein, parti...    79   8e-13

>gb|ACF21695.1| NBS-type resistance protein RGC5 [Musa acuminata subsp.
           malaccensis]
          Length = 1442

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 41/80 (51%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
 Frame = -2

Query: 239 MAVELIVGGWFAQAFIQTLIDKASDKAIQLFAERRGFAEDMENLRTSLLETQIILDEVQI 60
           M+  L++GGWFAQ+FIQTL+DKAS+ AIQ  A  RG  +D+  LRTSLL    ILD+ + 
Sbjct: 1   MSTALVIGGWFAQSFIQTLLDKASNCAIQQLARCRGLHDDLRRLRTSLLRIHAILDKAET 60

Query: 59  S-RSNNTKWEPLMKELKDAA 3
                NT    L+++LKDAA
Sbjct: 61  RWNHKNTSLVELVRQLKDAA 80


>gb|ABY75805.1| resistance gene candidate NBS-type protein, partial [Musa acuminata
           subsp. malaccensis]
          Length = 383

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 41/80 (51%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
 Frame = -2

Query: 239 MAVELIVGGWFAQAFIQTLIDKASDKAIQLFAERRGFAEDMENLRTSLLETQIILDEVQI 60
           M+  L++GGWFAQ+FIQTL+DKAS+ AIQ  A  RG  +D+  LRTSLL    ILD+ + 
Sbjct: 1   MSTALVIGGWFAQSFIQTLLDKASNCAIQQLARCRGLHDDLRRLRTSLLRIHAILDKAET 60

Query: 59  S-RSNNTKWEPLMKELKDAA 3
                NT    L+++LKDAA
Sbjct: 61  RWNHKNTSLVELVRQLKDAA 80


Top