BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00044131
         (983 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S...   249   1e-63
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s...   248   2e-63
tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family...   247   4e-63
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo...   247   6e-63
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g...   247   6e-63
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s...   241   4e-61
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s...   236   8e-60
ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III s...   219   1e-54
gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aeg...   189   1e-45
emb|CBI16226.3| unnamed protein product [Vitis vinifera]              185   3e-44
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   185   3e-44
gb|EXB53230.1| DNA-directed RNA polymerase III subunit RPC1 [Mor...   184   6e-44
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s...   183   8e-44
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s...   183   8e-44
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s...   183   8e-44
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s...   183   1e-43
gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]          183   1e-43
dbj|BAK03274.1| predicted protein [Hordeum vulgare subsp. vulgare]    183   1e-43
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [...   181   4e-43
ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arab...   178   2e-42

>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
           gi|241937900|gb|EES11045.1| hypothetical protein
           SORBIDRAFT_06g021120 [Sorghum bicolor]
          Length = 1391

 Score =  249 bits (636), Expect = 1e-63
 Identities = 114/159 (71%), Positives = 134/159 (84%)
 Frame = -2

Query: 478 MARREEKLRCTKELYNEDMGPRRIQSIRFSALSGEEIKNSSEVQVWNNRIYGADLRPVQN 299
           MA+ EEKLRCTKE + ED+G RRI+SIRFS LSG EI+ S+EVQVWNNRIYG D++PV N
Sbjct: 1   MAKPEEKLRCTKEPFIEDVGTRRIKSIRFSVLSGSEIRKSAEVQVWNNRIYGHDMKPVPN 60

Query: 298 GLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILNILKCICKACS 119
           GLLDPRMG  NK   C+TCHG FS+CPGHFGYLKL LPVFNVGFFN IL++LKCICK+CS
Sbjct: 61  GLLDPRMGVPNKREKCSTCHGEFSDCPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCS 120

Query: 118 RILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRCKL 2
           R+LL E DR+ +LKKMRNP+AD   K+A M K+RD+CKL
Sbjct: 121 RVLLFEKDRREFLKKMRNPRADALQKSATMKKVRDKCKL 159


>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
           brachyantha]
          Length = 1389

 Score =  248 bits (634), Expect = 2e-63
 Identities = 115/159 (72%), Positives = 134/159 (84%)
 Frame = -2

Query: 478 MARREEKLRCTKELYNEDMGPRRIQSIRFSALSGEEIKNSSEVQVWNNRIYGADLRPVQN 299
           MAR EEKLRCTKE + ED G RRI+SIRFS  SG E++ S+EVQVWN+RIY  ++RPV N
Sbjct: 1   MARPEEKLRCTKEPFIEDAGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYNQEMRPVPN 60

Query: 298 GLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILNILKCICKACS 119
           GLLD RMGAANK G C+TCHG+F+ECPGHFGYLKL LPVFNVGFFN IL++LKCICK CS
Sbjct: 61  GLLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKGCS 120

Query: 118 RILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRCKL 2
           R+LLVE DR  +LKKMRNPKAD   K+A+M K+RD+CKL
Sbjct: 121 RVLLVEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKCKL 159


>tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
          Length = 1030

 Score =  247 bits (631), Expect = 4e-63
 Identities = 113/159 (71%), Positives = 132/159 (83%)
 Frame = -2

Query: 478 MARREEKLRCTKELYNEDMGPRRIQSIRFSALSGEEIKNSSEVQVWNNRIYGADLRPVQN 299
           MA+ EEKLRCTKE + ED+G RRI+SIRFS LSG EI+ S+EVQVWNNRIY  D+ PV N
Sbjct: 1   MAKPEEKLRCTKEPFIEDVGTRRIKSIRFSVLSGSEIRKSAEVQVWNNRIYDRDMTPVPN 60

Query: 298 GLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILNILKCICKACS 119
           GLLDPRMG   K G C TCHG FS+CPGHFGYLKL LPVFNVGFFN IL++LKCICK+CS
Sbjct: 61  GLLDPRMGIPTKRGKCNTCHGEFSDCPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCS 120

Query: 118 RILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRCKL 2
           R+LL+E DR+ +LKKMRNP+AD   K+A M K+RD+CKL
Sbjct: 121 RVLLIEKDRREFLKKMRNPRADALQKSATMKKVRDKCKL 159


>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
          Length = 1321

 Score =  247 bits (630), Expect = 6e-63
 Identities = 113/159 (71%), Positives = 136/159 (85%)
 Frame = -2

Query: 478 MARREEKLRCTKELYNEDMGPRRIQSIRFSALSGEEIKNSSEVQVWNNRIYGADLRPVQN 299
           MAR EEKLRCTKE + ED+G RRI+SIRFS  SG E++ S+EVQVWN+RIY  +++PV N
Sbjct: 1   MARPEEKLRCTKEPFIEDVGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYNHEMKPVPN 60

Query: 298 GLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILNILKCICKACS 119
           GLLD RMGAANK G C+TCHG+F+ECPGHFGYLKL LPVFNVGFFN IL++LKCICK+CS
Sbjct: 61  GLLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCS 120

Query: 118 RILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRCKL 2
           R+LL+E DR  +LKKMRNPKAD   K+A+M K+RD+CKL
Sbjct: 121 RVLLMEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKCKL 159


>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
           gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
           Japonica Group] gi|38347455|emb|CAD41360.2|
           OSJNBa0076N16.24 [Oryza sativa Japonica Group]
           gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
           Japonica Group] gi|116310339|emb|CAH67354.1|
           OSIGBa0130B08.14 [Oryza sativa Indica Group]
           gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
           Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218195112|gb|EEC77539.1| hypothetical protein
           OsI_16437 [Oryza sativa Indica Group]
          Length = 1383

 Score =  247 bits (630), Expect = 6e-63
 Identities = 113/159 (71%), Positives = 136/159 (85%)
 Frame = -2

Query: 478 MARREEKLRCTKELYNEDMGPRRIQSIRFSALSGEEIKNSSEVQVWNNRIYGADLRPVQN 299
           MAR EEKLRCTKE + ED+G RRI+SIRFS  SG E++ S+EVQVWN+RIY  +++PV N
Sbjct: 1   MARPEEKLRCTKEPFIEDVGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYNHEMKPVPN 60

Query: 298 GLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILNILKCICKACS 119
           GLLD RMGAANK G C+TCHG+F+ECPGHFGYLKL LPVFNVGFFN IL++LKCICK+CS
Sbjct: 61  GLLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCS 120

Query: 118 RILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRCKL 2
           R+LL+E DR  +LKKMRNPKAD   K+A+M K+RD+CKL
Sbjct: 121 RVLLMEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKCKL 159


>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           [Brachypodium distachyon]
          Length = 1392

 Score =  241 bits (614), Expect = 4e-61
 Identities = 112/159 (70%), Positives = 133/159 (83%)
 Frame = -2

Query: 478 MARREEKLRCTKELYNEDMGPRRIQSIRFSALSGEEIKNSSEVQVWNNRIYGADLRPVQN 299
           MAR EEKLRCTKE + ED+G RRI+S+RFS  SG+EI+ S+E QVWNNRIYG D++PV N
Sbjct: 1   MARPEEKLRCTKEPFVEDVGTRRIKSMRFSMFSGKEIRQSAETQVWNNRIYGNDMKPVPN 60

Query: 298 GLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILNILKCICKACS 119
           GLLDPRMGAANK G C TCHG++ ECPGHFGYLKL LPVFNVGFFN+IL++LK ICK CS
Sbjct: 61  GLLDPRMGAANKFGECATCHGSYHECPGHFGYLKLVLPVFNVGFFNNILDVLKSICKGCS 120

Query: 118 RILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRCKL 2
           RILL E D++ +LKKMRNP+ +   K ALM K+RD+CKL
Sbjct: 121 RILLHEKDQREFLKKMRNPRLEPLHKAALMKKVRDKCKL 159


>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           [Setaria italica]
          Length = 1397

 Score =  236 bits (603), Expect = 8e-60
 Identities = 111/162 (68%), Positives = 133/162 (82%), Gaps = 3/162 (1%)
 Frame = -2

Query: 478 MARREEKLRCTKELYNEDMGPRRIQSIRFSALSGEEIKNSSEVQVWNNRIYGADLRPVQN 299
           MA+ EEKLRCTKE + ED+G RRI+SIRFS LSG EI+ S+EVQVWN+RIY  D++PV N
Sbjct: 1   MAKPEEKLRCTKEPFIEDVGARRIKSIRFSVLSGSEIRKSAEVQVWNSRIYEHDMKPVPN 60

Query: 298 GLLDPRMGAANKAGV---CTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILNILKCICK 128
           GLLD RMG A+K      C+TCHG F+ECPGHFGYLKL LPVFNVGFFN IL++LKCICK
Sbjct: 61  GLLDMRMGLASKKDTELKCSTCHGPFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICK 120

Query: 127 ACSRILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRCKL 2
            CSR+LL E DR+ +LKKMRNP+AD   K+A+M K+RD+CKL
Sbjct: 121 GCSRVLLAEKDRREFLKKMRNPRADALQKSAIMKKVRDKCKL 162


>ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           [Brachypodium distachyon]
          Length = 1400

 Score =  219 bits (558), Expect = 1e-54
 Identities = 98/160 (61%), Positives = 129/160 (80%)
 Frame = -2

Query: 484 SAMARREEKLRCTKELYNEDMGPRRIQSIRFSALSGEEIKNSSEVQVWNNRIYGADLRPV 305
           +A  R EEKLRCTKE + +D  P+RI+S+RF  LSG+EI+ S+  QVWN RIY + L+PV
Sbjct: 2   AAQWRPEEKLRCTKEPFVDDASPQRIKSMRFCTLSGKEIRQSAAAQVWNTRIYDSSLKPV 61

Query: 304 QNGLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILNILKCICKA 125
            NGLLDPRMGA++K G C TCHG+++ECPGHFGY+KL LPVFNVG+FN IL +LKCICK 
Sbjct: 62  PNGLLDPRMGASDKCGECATCHGSYTECPGHFGYIKLALPVFNVGYFNKILAVLKCICKG 121

Query: 124 CSRILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRCK 5
           CSR+LL E+  + +LKKMRNP+AD   ++++M K+RD+C+
Sbjct: 122 CSRVLLTENIHQEFLKKMRNPRAD---RSSIMIKVRDKCR 158


>gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aegilops tauschii]
          Length = 1117

 Score =  189 bits (481), Expect = 1e-45
 Identities = 84/126 (66%), Positives = 105/126 (83%)
 Frame = -2

Query: 400 IRFSALSGEEIKNSSEVQVWNNRIYGADLRPVQNGLLDPRMGAANKAGVCTTCHGNFSEC 221
           +RFS  SG+EI+ S+E QVWNNRIY  +++P  NGLLD RMGAANK G C TCHG+++EC
Sbjct: 1   MRFSMFSGKEIRQSAEAQVWNNRIYEPNMKPAPNGLLDTRMGAANKQGECGTCHGSYTEC 60

Query: 220 PGHFGYLKLTLPVFNVGFFNSILNILKCICKACSRILLVEDDRKTYLKKMRNPKADVAMK 41
           PGHFGYLKL LPVFN+GFFN+IL+++KCICK CSR+LLVE DR+ +LKKMR P+A+  +K
Sbjct: 61  PGHFGYLKLALPVFNIGFFNNILDVVKCICKGCSRVLLVEKDRREFLKKMRQPRAEPLVK 120

Query: 40  NALMTK 23
            ALM K
Sbjct: 121 FALMKK 126


>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score =  185 bits (469), Expect = 3e-44
 Identities = 86/153 (56%), Positives = 112/153 (73%)
 Frame = -2

Query: 466 EEKLRCTKELYNEDMGPRRIQSIRFSALSGEEIKNSSEVQVWNNRIYGADLRPVQNGLLD 287
           ++ ++ TKE Y ED+GPR+I+SIRF+  S  EI  ++EVQVW    Y A+ +P++NGLLD
Sbjct: 2   KDGIQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLD 61

Query: 286 PRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILNILKCICKACSRILL 107
           PRMG ANK G C TC GNF +CPGH GYL L LPV+NVG+ ++I++ILKCICK+CSR+LL
Sbjct: 62  PRMGPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLL 121

Query: 106 VEDDRKTYLKKMRNPKADVAMKNALMTKIRDRC 8
            E   K YLKKMR+ K +   K  LM KI  +C
Sbjct: 122 DEKASKDYLKKMRSQKMEALKKAELMKKIVQKC 154


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
           vinifera]
          Length = 1383

 Score =  185 bits (469), Expect = 3e-44
 Identities = 86/153 (56%), Positives = 112/153 (73%)
 Frame = -2

Query: 466 EEKLRCTKELYNEDMGPRRIQSIRFSALSGEEIKNSSEVQVWNNRIYGADLRPVQNGLLD 287
           ++ ++ TKE Y ED+GPR+I+SIRF+  S  EI  ++EVQVW    Y A+ +P++NGLLD
Sbjct: 2   KDGIQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLD 61

Query: 286 PRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILNILKCICKACSRILL 107
           PRMG ANK G C TC GNF +CPGH GYL L LPV+NVG+ ++I++ILKCICK+CSR+LL
Sbjct: 62  PRMGPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLL 121

Query: 106 VEDDRKTYLKKMRNPKADVAMKNALMTKIRDRC 8
            E   K YLKKMR+ K +   K  LM KI  +C
Sbjct: 122 DEKASKDYLKKMRSQKMEALKKAELMKKIVQKC 154


>gb|EXB53230.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
          Length = 232

 Score =  184 bits (466), Expect = 6e-44
 Identities = 86/159 (54%), Positives = 115/159 (72%)
 Frame = -2

Query: 484 SAMARREEKLRCTKELYNEDMGPRRIQSIRFSALSGEEIKNSSEVQVWNNRIYGADLRPV 305
           +A   + + +  TK+ + ED+GPRRI+S++F+  S  EI   +EVQVW  + Y  + +PV
Sbjct: 2   AASRDQAQNILFTKQPFVEDVGPRRIKSMQFTVQSASEISKMAEVQVWKGQYYDPNRKPV 61

Query: 304 QNGLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILNILKCICKA 125
           ++GLLDPRMG ANK   C TCHG FS+CPGH+GYLKL LPV+NVG+ ++IL+ILKCICK+
Sbjct: 62  EDGLLDPRMGPANKFSECATCHGRFSDCPGHYGYLKLALPVYNVGYLSTILDILKCICKS 121

Query: 124 CSRILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRC 8
           CSRILL E  RK +LKKMR+ K +   K  LM KI  +C
Sbjct: 122 CSRILLDEKLRKDFLKKMRSSKMEPLKKGELMKKIVKKC 160


>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           isoform X2 [Solanum tuberosum]
          Length = 1243

 Score =  183 bits (465), Expect = 8e-44
 Identities = 85/157 (54%), Positives = 112/157 (71%)
 Frame = -2

Query: 478 MARREEKLRCTKELYNEDMGPRRIQSIRFSALSGEEIKNSSEVQVWNNRIYGADLRPVQN 299
           M R +  L+ TK+ Y ED+GPR+I+SI+FS  S  EI  S+EV+V+    Y +  +P+QN
Sbjct: 1   MKRIQNSLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVYLGLYYESTKKPIQN 60

Query: 298 GLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILNILKCICKACS 119
           GLLDPRMG  NK G C TCHGNF ECPGH+GYL L LPV+NVG+  ++++ILKCICK CS
Sbjct: 61  GLLDPRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCS 120

Query: 118 RILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRC 8
            ILL + +R+  LKKMRNP+ +   K+ L  K+  RC
Sbjct: 121 SILLDDKERRDILKKMRNPRTEFLKKSELHKKVVKRC 157


>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           isoform X1 [Solanum tuberosum]
          Length = 1394

 Score =  183 bits (465), Expect = 8e-44
 Identities = 85/157 (54%), Positives = 112/157 (71%)
 Frame = -2

Query: 478 MARREEKLRCTKELYNEDMGPRRIQSIRFSALSGEEIKNSSEVQVWNNRIYGADLRPVQN 299
           M R +  L+ TK+ Y ED+GPR+I+SI+FS  S  EI  S+EV+V+    Y +  +P+QN
Sbjct: 1   MKRIQNSLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVYLGLYYESTKKPIQN 60

Query: 298 GLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILNILKCICKACS 119
           GLLDPRMG  NK G C TCHGNF ECPGH+GYL L LPV+NVG+  ++++ILKCICK CS
Sbjct: 61  GLLDPRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCS 120

Query: 118 RILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRC 8
            ILL + +R+  LKKMRNP+ +   K+ L  K+  RC
Sbjct: 121 SILLDDKERRDILKKMRNPRTEFLKKSELHKKVVKRC 157


>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           [Solanum lycopersicum]
          Length = 1390

 Score =  183 bits (465), Expect = 8e-44
 Identities = 84/157 (53%), Positives = 113/157 (71%)
 Frame = -2

Query: 478 MARREEKLRCTKELYNEDMGPRRIQSIRFSALSGEEIKNSSEVQVWNNRIYGADLRPVQN 299
           M R +E L+ TK+ Y ED+GPR+I+SI+FS  S  EI   +EV+V+    Y +  +P+QN
Sbjct: 1   MNRAQESLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKLAEVEVYLGLYYESTKKPIQN 60

Query: 298 GLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILNILKCICKACS 119
           GLLDPRMG  NK+G C TCHGNF ECPGH+GYL L LPV+NVG+  ++++ILKCICK CS
Sbjct: 61  GLLDPRMGPPNKSGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCS 120

Query: 118 RILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRC 8
            ILL + +R+  LKKMRNP+ +   K+ L  ++  RC
Sbjct: 121 SILLDDKERRDILKKMRNPRTEFLKKSELHKRVVKRC 157


>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           isoform X1 [Citrus sinensis]
           gi|568870034|ref|XP_006488217.1| PREDICTED: DNA-directed
           RNA polymerase III subunit rpc1-like isoform X2 [Citrus
           sinensis]
          Length = 1404

 Score =  183 bits (464), Expect = 1e-43
 Identities = 84/161 (52%), Positives = 114/161 (70%)
 Frame = -2

Query: 490 LNSAMARREEKLRCTKELYNEDMGPRRIQSIRFSALSGEEIKNSSEVQVWNNRIYGADLR 311
           +   + ++ + +  TK+ Y ED+GPR+I+SI+FS +S  EI  ++EVQV+  + Y ++  
Sbjct: 1   MTQQLQQKSQSIAFTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRV 60

Query: 310 PVQNGLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILNILKCIC 131
           P++ GLLDPRMG ANK+  C TCHG FS CPGH+GYL L LPV+NVG+ ++IL+ILKCIC
Sbjct: 61  PIEGGLLDPRMGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYNVGYLSTILDILKCIC 120

Query: 130 KACSRILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRC 8
           K CSR+LL E   K YLKKMRNPK +   K  LM  I  +C
Sbjct: 121 KYCSRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKC 161


>gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]
          Length = 1395

 Score =  183 bits (464), Expect = 1e-43
 Identities = 85/147 (57%), Positives = 109/147 (74%)
 Frame = -2

Query: 448 TKELYNEDMGPRRIQSIRFSALSGEEIKNSSEVQVWNNRIYGADLRPVQNGLLDPRMGAA 269
           TK  Y ED+GPR+I+SI+FS LS  EI  ++EVQV+    Y    RP++ GLLDPRMG A
Sbjct: 6   TKRPYIEDVGPRKIKSIQFSMLSDSEIAKAAEVQVYQALYYDPKSRPIEGGLLDPRMGPA 65

Query: 268 NKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILNILKCICKACSRILLVEDDRK 89
           NK+G C TCHGNF++CPGH+GYL L LPV+NVG+ ++IL+ILKCICK+CSRI+L E   K
Sbjct: 66  NKSGKCATCHGNFADCPGHYGYLSLALPVYNVGYLSTILDILKCICKSCSRIILDEKLCK 125

Query: 88  TYLKKMRNPKADVAMKNALMTKIRDRC 8
            YLK+MR+PK D   K  +M  I  +C
Sbjct: 126 DYLKRMRSPKIDALKKGDIMKSIVKKC 152


>dbj|BAK03274.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 168

 Score =  183 bits (464), Expect = 1e-43
 Identities = 84/130 (64%), Positives = 106/130 (81%)
 Frame = -2

Query: 400 IRFSALSGEEIKNSSEVQVWNNRIYGADLRPVQNGLLDPRMGAANKAGVCTTCHGNFSEC 221
           +RF+ LSG+EI+ S+E QVWNNRIYG D++PV NGLLD RMGAANK G C TCHG+++EC
Sbjct: 8   MRFNMLSGKEIRQSAEAQVWNNRIYGPDMKPVPNGLLDTRMGAANKQGDCGTCHGSYTEC 67

Query: 220 PGHFGYLKLTLPVFNVGFFNSILNILKCICKACSRILLVEDDRKTYLKKMRNPKADVAMK 41
           PGHFGYLKL LPVFNVGFFN+IL+++KCICK CSR+LLVE DR+ +LKK R     + + 
Sbjct: 68  PGHFGYLKLALPVFNVGFFNNILDVVKCICKGCSRVLLVEKDRREFLKKARR----LGVA 123

Query: 40  NALMTKIRDR 11
           +AL   +R+R
Sbjct: 124 SALRFCLRER 133


>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
           gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
           family protein [Populus trichocarpa]
          Length = 1394

 Score =  181 bits (459), Expect = 4e-43
 Identities = 85/157 (54%), Positives = 116/157 (73%)
 Frame = -2

Query: 478 MARREEKLRCTKELYNEDMGPRRIQSIRFSALSGEEIKNSSEVQVWNNRIYGADLRPVQN 299
           M +R + +  TK+ Y ED+GPRRI+SI+FS +SG +I  +SE QV   + Y A+ + +  
Sbjct: 1   MQQRAQDIIYTKQPYIEDVGPRRIKSIQFSTMSGSDILKASECQVHLGQYYDANKKAIVG 60

Query: 298 GLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILNILKCICKACS 119
           GLLD RMGA NK G C TC G+F++CPGHFGYL L LPV+NVG+ ++IL+ILKCICK+CS
Sbjct: 61  GLLDTRMGAPNKHGTCQTCGGSFTDCPGHFGYLNLVLPVYNVGYLSTILDILKCICKSCS 120

Query: 118 RILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRC 8
           R+L+ E  RK+YLK+MRNP+ +   KN LM +I  +C
Sbjct: 121 RVLVDEKLRKSYLKRMRNPRTEPLKKNELMKEIVKKC 157


>ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arabidopsis lyrata subsp.
           lyrata] gi|297310500|gb|EFH40924.1| hypothetical protein
           ARALYDRAFT_496142 [Arabidopsis lyrata subsp. lyrata]
          Length = 1376

 Score =  178 bits (452), Expect = 2e-42
 Identities = 83/151 (54%), Positives = 106/151 (70%)
 Frame = -2

Query: 460 KLRCTKELYNEDMGPRRIQSIRFSALSGEEIKNSSEVQVWNNRIYGADLRPVQNGLLDPR 281
           ++  TK+ Y ED+GP +I+SI FS LS  E+  ++EVQVW N  Y  +L+P +NGLLD R
Sbjct: 6   EIEFTKQPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWKNNYYETNLKPYENGLLDAR 65

Query: 280 MGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILNILKCICKACSRILLVE 101
           MG  NK  +CTTC GNF  CPGH+GYLKL LPV+NVGFFN IL+ILKCICK CS +LL E
Sbjct: 66  MGPPNKKSICTTCDGNFQNCPGHYGYLKLDLPVYNVGFFNFILDILKCICKRCSNMLLDE 125

Query: 100 DDRKTYLKKMRNPKADVAMKNALMTKIRDRC 8
              + +L+KMRNPK +   K  L   +  +C
Sbjct: 126 KLYEDHLRKMRNPKMEPLKKTELAKAVVKKC 156