BLASTX nr result

ID: Zingiber25_contig00044047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00044047
         (410 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006606108.1| PREDICTED: DNA mismatch repair protein MSH3-...   137   2e-30
ref|XP_006606107.1| PREDICTED: DNA mismatch repair protein MSH3-...   137   2e-30
ref|XP_006606106.1| PREDICTED: DNA mismatch repair protein MSH3-...   137   2e-30
ref|XP_006606105.1| PREDICTED: DNA mismatch repair protein MSH3-...   137   2e-30
ref|XP_006606104.1| PREDICTED: DNA mismatch repair protein MSH3-...   137   2e-30
ref|XP_004308095.1| PREDICTED: DNA mismatch repair protein MSH3-...   136   3e-30
gb|EMJ20105.1| hypothetical protein PRUPE_ppa000560mg [Prunus pe...   133   3e-29
ref|XP_004496581.1| PREDICTED: DNA mismatch repair protein MSH3-...   130   2e-28
ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-...   129   3e-28
emb|CBI37346.3| unnamed protein product [Vitis vinifera]              129   3e-28
ref|XP_006413297.1| hypothetical protein EUTSA_v10024274mg [Eutr...   129   4e-28
ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [...   129   5e-28
emb|CBI29513.3| unnamed protein product [Vitis vinifera]              128   7e-28
ref|XP_006283020.1| hypothetical protein CARUB_v10004012mg [Caps...   128   9e-28
gb|ESW15390.1| hypothetical protein PHAVU_007G069100g [Phaseolus...   127   2e-27
gb|ESW15389.1| hypothetical protein PHAVU_007G069100g [Phaseolus...   127   2e-27
ref|NP_194284.2| DNA mismatch repair protein MSH3 [Arabidopsis t...   126   3e-27
emb|CAB81364.1| putative DNA mismatch repair protein [Arabidopsi...   126   3e-27
emb|CAA18172.1| putative DNA mismatch repair protein [Arabidopsi...   126   3e-27
ref|XP_002867605.1| hypothetical protein ARALYDRAFT_492273 [Arab...   126   3e-27

>ref|XP_006606108.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X5
           [Glycine max]
          Length = 835

 Score =  137 bits (344), Expect = 2e-30
 Identities = 80/139 (57%), Positives = 93/139 (66%), Gaps = 3/139 (2%)
 Frame = -1

Query: 410 PPPSRSSPKISATVSLSPSAKRRLQSLYXXXXXXXXXXXXXXXXALVPVPSSTPDLHRRF 231
           PPP    PKISATV+ SP AKRRL S +                   PVP   P LH+RF
Sbjct: 21  PPPPPPPPKISATVTFSP-AKRRLTSNFTTSRKHPKLSPHTQN----PVP---PSLHQRF 72

Query: 230 LSKLLVPASS---PPRKSLPQNPTYTPLELQVVDLRSKHPDVVLMFEVGYRYRFFGQDAE 60
           L KLL P++    P   S P  PTYTPLE QV+DL++KHPDV+LM EVGY+YRFFGQDAE
Sbjct: 73  LQKLLEPSTPQQHPASSSKP--PTYTPLEQQVLDLKAKHPDVLLMVEVGYKYRFFGQDAE 130

Query: 59  IAARVLGIFAHVDHNFLTA 3
            A+RVLGI+AH+DHNFLTA
Sbjct: 131 HASRVLGIYAHMDHNFLTA 149


>ref|XP_006606107.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X4
           [Glycine max]
          Length = 967

 Score =  137 bits (344), Expect = 2e-30
 Identities = 80/139 (57%), Positives = 93/139 (66%), Gaps = 3/139 (2%)
 Frame = -1

Query: 410 PPPSRSSPKISATVSLSPSAKRRLQSLYXXXXXXXXXXXXXXXXALVPVPSSTPDLHRRF 231
           PPP    PKISATV+ SP AKRRL S +                   PVP   P LH+RF
Sbjct: 21  PPPPPPPPKISATVTFSP-AKRRLTSNFTTSRKHPKLSPHTQN----PVP---PSLHQRF 72

Query: 230 LSKLLVPASS---PPRKSLPQNPTYTPLELQVVDLRSKHPDVVLMFEVGYRYRFFGQDAE 60
           L KLL P++    P   S P  PTYTPLE QV+DL++KHPDV+LM EVGY+YRFFGQDAE
Sbjct: 73  LQKLLEPSTPQQHPASSSKP--PTYTPLEQQVLDLKAKHPDVLLMVEVGYKYRFFGQDAE 130

Query: 59  IAARVLGIFAHVDHNFLTA 3
            A+RVLGI+AH+DHNFLTA
Sbjct: 131 HASRVLGIYAHMDHNFLTA 149


>ref|XP_006606106.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X3
           [Glycine max]
          Length = 968

 Score =  137 bits (344), Expect = 2e-30
 Identities = 80/139 (57%), Positives = 93/139 (66%), Gaps = 3/139 (2%)
 Frame = -1

Query: 410 PPPSRSSPKISATVSLSPSAKRRLQSLYXXXXXXXXXXXXXXXXALVPVPSSTPDLHRRF 231
           PPP    PKISATV+ SP AKRRL S +                   PVP   P LH+RF
Sbjct: 21  PPPPPPPPKISATVTFSP-AKRRLTSNFTTSRKHPKLSPHTQN----PVP---PSLHQRF 72

Query: 230 LSKLLVPASS---PPRKSLPQNPTYTPLELQVVDLRSKHPDVVLMFEVGYRYRFFGQDAE 60
           L KLL P++    P   S P  PTYTPLE QV+DL++KHPDV+LM EVGY+YRFFGQDAE
Sbjct: 73  LQKLLEPSTPQQHPASSSKP--PTYTPLEQQVLDLKAKHPDVLLMVEVGYKYRFFGQDAE 130

Query: 59  IAARVLGIFAHVDHNFLTA 3
            A+RVLGI+AH+DHNFLTA
Sbjct: 131 HASRVLGIYAHMDHNFLTA 149


>ref|XP_006606105.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X2
           [Glycine max]
          Length = 991

 Score =  137 bits (344), Expect = 2e-30
 Identities = 80/139 (57%), Positives = 93/139 (66%), Gaps = 3/139 (2%)
 Frame = -1

Query: 410 PPPSRSSPKISATVSLSPSAKRRLQSLYXXXXXXXXXXXXXXXXALVPVPSSTPDLHRRF 231
           PPP    PKISATV+ SP AKRRL S +                   PVP   P LH+RF
Sbjct: 21  PPPPPPPPKISATVTFSP-AKRRLTSNFTTSRKHPKLSPHTQN----PVP---PSLHQRF 72

Query: 230 LSKLLVPASS---PPRKSLPQNPTYTPLELQVVDLRSKHPDVVLMFEVGYRYRFFGQDAE 60
           L KLL P++    P   S P  PTYTPLE QV+DL++KHPDV+LM EVGY+YRFFGQDAE
Sbjct: 73  LQKLLEPSTPQQHPASSSKP--PTYTPLEQQVLDLKAKHPDVLLMVEVGYKYRFFGQDAE 130

Query: 59  IAARVLGIFAHVDHNFLTA 3
            A+RVLGI+AH+DHNFLTA
Sbjct: 131 HASRVLGIYAHMDHNFLTA 149


>ref|XP_006606104.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X1
           [Glycine max]
          Length = 1070

 Score =  137 bits (344), Expect = 2e-30
 Identities = 80/139 (57%), Positives = 93/139 (66%), Gaps = 3/139 (2%)
 Frame = -1

Query: 410 PPPSRSSPKISATVSLSPSAKRRLQSLYXXXXXXXXXXXXXXXXALVPVPSSTPDLHRRF 231
           PPP    PKISATV+ SP AKRRL S +                   PVP   P LH+RF
Sbjct: 21  PPPPPPPPKISATVTFSP-AKRRLTSNFTTSRKHPKLSPHTQN----PVP---PSLHQRF 72

Query: 230 LSKLLVPASS---PPRKSLPQNPTYTPLELQVVDLRSKHPDVVLMFEVGYRYRFFGQDAE 60
           L KLL P++    P   S P  PTYTPLE QV+DL++KHPDV+LM EVGY+YRFFGQDAE
Sbjct: 73  LQKLLEPSTPQQHPASSSKP--PTYTPLEQQVLDLKAKHPDVLLMVEVGYKYRFFGQDAE 130

Query: 59  IAARVLGIFAHVDHNFLTA 3
            A+RVLGI+AH+DHNFLTA
Sbjct: 131 HASRVLGIYAHMDHNFLTA 149


>ref|XP_004308095.1| PREDICTED: DNA mismatch repair protein MSH3-like [Fragaria vesca
           subsp. vesca]
          Length = 1106

 Score =  136 bits (343), Expect = 3e-30
 Identities = 72/136 (52%), Positives = 92/136 (67%)
 Frame = -1

Query: 410 PPPSRSSPKISATVSLSPSAKRRLQSLYXXXXXXXXXXXXXXXXALVPVPSSTPDLHRRF 231
           PPP    PKI+ATV+ SPS  +RL S +                 +   P+  P LH++F
Sbjct: 36  PPPPTPPPKITATVAFSPS--KRLLSSHLTSSPKRPKLSPHTHNPIPTTPN--PSLHQKF 91

Query: 230 LSKLLVPASSPPRKSLPQNPTYTPLELQVVDLRSKHPDVVLMFEVGYRYRFFGQDAEIAA 51
           L KLL P++S P+   P NP  TPLELQVVDL+ ++PDV+LM EVGY+YRFFG+DAEIAA
Sbjct: 92  LQKLLEPSTSIPQPPPPSNPKLTPLELQVVDLKKRYPDVLLMVEVGYKYRFFGEDAEIAA 151

Query: 50  RVLGIFAHVDHNFLTA 3
           R LGI+AH+DH+FLTA
Sbjct: 152 RNLGIYAHMDHSFLTA 167


>gb|EMJ20105.1| hypothetical protein PRUPE_ppa000560mg [Prunus persica]
          Length = 1096

 Score =  133 bits (334), Expect = 3e-29
 Identities = 72/137 (52%), Positives = 89/137 (64%), Gaps = 3/137 (2%)
 Frame = -1

Query: 404 PSRSSPKISATVSLSPSAKRRLQSLYXXXXXXXXXXXXXXXXALVPVPSS-TPDLHRRFL 228
           P    PKI+ATV+ SPS +  L S                     P+P++  P LH++FL
Sbjct: 43  PPTPPPKITATVNFSPSKRTLLSSHLTSSSPKPSKLPKLSPHTHNPIPTAPNPSLHQKFL 102

Query: 227 SKLLVPASSPPRKSLPQNPT--YTPLELQVVDLRSKHPDVVLMFEVGYRYRFFGQDAEIA 54
            KLL P+S  P  S   NP   +TPLE QVVDL+ ++PDV+LM EVGY+YRFFGQDAEIA
Sbjct: 103 QKLLEPSSDVPEPSPSSNPPAKFTPLEQQVVDLKKRYPDVLLMVEVGYKYRFFGQDAEIA 162

Query: 53  ARVLGIFAHVDHNFLTA 3
           ARVLGI+AH+DHNFLTA
Sbjct: 163 ARVLGIYAHMDHNFLTA 179


>ref|XP_004496581.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X1 [Cicer
           arietinum]
          Length = 1076

 Score =  130 bits (327), Expect = 2e-28
 Identities = 74/136 (54%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
 Frame = -1

Query: 407 PPSRSSPKISATVSLSPSAKRRLQSLYXXXXXXXXXXXXXXXXALVPVPSS-TPDLHRRF 231
           PPS S+PKIS+TV+ SPS +R +  L                    PVPS   P LH RF
Sbjct: 27  PPSSSTPKISSTVTFSPSKRRLISHLTSPNKQPKLSPHTNN-----PVPSPPNPSLHNRF 81

Query: 230 LSKLLVPASSPPRKSLPQNPTYTPLELQVVDLRSKHPDVVLMFEVGYRYRFFGQDAEIAA 51
           L KLL P + P   S  +   +TPLE QVV+L++K+PDV+LM EVGY+YRFFGQDAE AA
Sbjct: 82  LHKLLEP-THPQLPSSSKPVKFTPLEHQVVELKAKYPDVLLMIEVGYKYRFFGQDAENAA 140

Query: 50  RVLGIFAHVDHNFLTA 3
           RVLGI+AH+DHNFLTA
Sbjct: 141 RVLGIYAHMDHNFLTA 156


>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
          Length = 1137

 Score =  129 bits (325), Expect = 3e-28
 Identities = 74/136 (54%), Positives = 87/136 (63%)
 Frame = -1

Query: 410 PPPSRSSPKISATVSLSPSAKRRLQSLYXXXXXXXXXXXXXXXXALVPVPSSTPDLHRRF 231
           P P    PKIS TV+ SPS  +RL S +                   P+    P LH++F
Sbjct: 41  PNPPTPPPKISTTVTFSPS--KRLPSSHVSPSTKPPKAPKISH----PID---PSLHQKF 91

Query: 230 LSKLLVPASSPPRKSLPQNPTYTPLELQVVDLRSKHPDVVLMFEVGYRYRFFGQDAEIAA 51
           + KLL P+SS P K       YTPLE QVVDL+ K+PDV+LM EVGYRYRFFG+DAEIAA
Sbjct: 92  VQKLLEPSSSTPTKLPLPTTKYTPLEQQVVDLKQKYPDVLLMVEVGYRYRFFGEDAEIAA 151

Query: 50  RVLGIFAHVDHNFLTA 3
           RVLGI+AHVDHNFLTA
Sbjct: 152 RVLGIYAHVDHNFLTA 167


>emb|CBI37346.3| unnamed protein product [Vitis vinifera]
          Length = 490

 Score =  129 bits (325), Expect = 3e-28
 Identities = 74/136 (54%), Positives = 87/136 (63%)
 Frame = -1

Query: 410 PPPSRSSPKISATVSLSPSAKRRLQSLYXXXXXXXXXXXXXXXXALVPVPSSTPDLHRRF 231
           P P    PKIS TV+ SPS  +RL S +                   P+    P LH++F
Sbjct: 41  PNPPTPPPKISTTVTFSPS--KRLPSSHVSPSTKPPKAPKISH----PID---PSLHQKF 91

Query: 230 LSKLLVPASSPPRKSLPQNPTYTPLELQVVDLRSKHPDVVLMFEVGYRYRFFGQDAEIAA 51
           + KLL P+SS P K       YTPLE QVVDL+ K+PDV+LM EVGYRYRFFG+DAEIAA
Sbjct: 92  VQKLLQPSSSTPTKLPLPTTKYTPLEQQVVDLKQKYPDVLLMVEVGYRYRFFGEDAEIAA 151

Query: 50  RVLGIFAHVDHNFLTA 3
           RVLGI+AHVDHNFLTA
Sbjct: 152 RVLGIYAHVDHNFLTA 167


>ref|XP_006413297.1| hypothetical protein EUTSA_v10024274mg [Eutrema salsugineum]
           gi|557114467|gb|ESQ54750.1| hypothetical protein
           EUTSA_v10024274mg [Eutrema salsugineum]
          Length = 1088

 Score =  129 bits (324), Expect = 4e-28
 Identities = 74/135 (54%), Positives = 91/135 (67%), Gaps = 2/135 (1%)
 Frame = -1

Query: 401 SRSSPKISATVSLSPSAKRRLQSLYXXXXXXXXXXXXXXXXALVPVPSSTPDLHRRFLSK 222
           S   PKISATVS SPS KR+L S +                     P+  P LHRRFL +
Sbjct: 31  STPPPKISATVSFSPS-KRKLLSDHLSAASPKKHKLSPHTQN----PTPDPSLHRRFLQR 85

Query: 221 LLVPASSPPRKSLPQNPT--YTPLELQVVDLRSKHPDVVLMFEVGYRYRFFGQDAEIAAR 48
            L P+   P +S P++ +  YTPLE QVV+L+SK+PDV+LM EVGYRYRFFG+DAEIAAR
Sbjct: 86  FLEPS---PEESAPESSSRKYTPLEQQVVELKSKYPDVILMVEVGYRYRFFGEDAEIAAR 142

Query: 47  VLGIFAHVDHNFLTA 3
           VLGI+AH+DHNF+TA
Sbjct: 143 VLGIYAHMDHNFMTA 157


>ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
           gi|223549918|gb|EEF51405.1| DNA mismatch repair protein
           MSH3, putative [Ricinus communis]
          Length = 1100

 Score =  129 bits (323), Expect = 5e-28
 Identities = 76/143 (53%), Positives = 97/143 (67%), Gaps = 7/143 (4%)
 Frame = -1

Query: 410 PP--PSRSSPKISATVSLSPSAKRRLQSLYXXXXXXXXXXXXXXXXALVPVPSSTPDLHR 237
           PP  P+ SSPKI+ATVS SP AKR+L S +                  +P PSS+  LH+
Sbjct: 33  PPTTPTPSSPKITATVSFSP-AKRKLLSTHLTSTPKKPKLSDND----IPTPSSS--LHQ 85

Query: 236 RFLSKLLVPASSPPRKSLPQNPT-----YTPLELQVVDLRSKHPDVVLMFEVGYRYRFFG 72
           +FL+K L P+S      +PQ P+     YTPLE QV+DL++K+PDV+LM EVGY+YRFFG
Sbjct: 86  KFLNKFLEPSSP----EIPQPPSSYPRKYTPLEKQVLDLKTKYPDVLLMIEVGYKYRFFG 141

Query: 71  QDAEIAARVLGIFAHVDHNFLTA 3
           +DAEIA RVLGI+AH DHNF+TA
Sbjct: 142 EDAEIAGRVLGIYAHKDHNFMTA 164


>emb|CBI29513.3| unnamed protein product [Vitis vinifera]
          Length = 470

 Score =  128 bits (322), Expect = 7e-28
 Identities = 74/136 (54%), Positives = 86/136 (63%)
 Frame = -1

Query: 410 PPPSRSSPKISATVSLSPSAKRRLQSLYXXXXXXXXXXXXXXXXALVPVPSSTPDLHRRF 231
           P P    PKIS TV+ SPS  +RL S +                   P+    P LH++F
Sbjct: 43  PNPPTPPPKISTTVTFSPS--KRLPSSHVSPSTKPPKAPKISH----PID---PSLHQKF 93

Query: 230 LSKLLVPASSPPRKSLPQNPTYTPLELQVVDLRSKHPDVVLMFEVGYRYRFFGQDAEIAA 51
           L KLL P+SS P K       YTPLE QVVDL+ K+PDV+LM EVGYRYRFFG+DAEIAA
Sbjct: 94  LQKLLEPSSSTPTKLPLPTTKYTPLEQQVVDLKQKYPDVLLMVEVGYRYRFFGEDAEIAA 153

Query: 50  RVLGIFAHVDHNFLTA 3
           RVL I+AHVDHNFLTA
Sbjct: 154 RVLAIYAHVDHNFLTA 169


>ref|XP_006283020.1| hypothetical protein CARUB_v10004012mg [Capsella rubella]
           gi|482551725|gb|EOA15918.1| hypothetical protein
           CARUB_v10004012mg [Capsella rubella]
          Length = 1182

 Score =  128 bits (321), Expect = 9e-28
 Identities = 74/136 (54%), Positives = 92/136 (67%), Gaps = 3/136 (2%)
 Frame = -1

Query: 401 SRSSPKISATVSLSPSAKRRLQSLYXXXXXXXXXXXXXXXXALVPVPSSTPDLHRRFLSK 222
           S  +PKISATVS SPS KR+L S +                  +P     P+LHRRFL +
Sbjct: 120 SSPAPKISATVSFSPS-KRKLLSEHLSAASPKKPKLSPHTQNPIP----DPNLHRRFLQR 174

Query: 221 LLVPASSPPRKSLPQNPT---YTPLELQVVDLRSKHPDVVLMFEVGYRYRFFGQDAEIAA 51
            L P+   P +S+P   +   YTPLE QVV+L+SK+PDVVLM EVGYRYRFFG+DAEIAA
Sbjct: 175 FLEPS---PEESVPATSSARKYTPLEQQVVELKSKYPDVVLMVEVGYRYRFFGEDAEIAA 231

Query: 50  RVLGIFAHVDHNFLTA 3
           RVLGI+AH+DH+F+TA
Sbjct: 232 RVLGIYAHMDHSFMTA 247


>gb|ESW15390.1| hypothetical protein PHAVU_007G069100g [Phaseolus vulgaris]
          Length = 1075

 Score =  127 bits (318), Expect = 2e-27
 Identities = 77/138 (55%), Positives = 88/138 (63%), Gaps = 2/138 (1%)
 Frame = -1

Query: 410 PPPSRSSPKISATVSLSPSAKRRLQSLYXXXXXXXXXXXXXXXXALVPVPSSTPDLHRRF 231
           PP    +PKI+AT + SPS KRRL S                   L P  SS   LH+RF
Sbjct: 29  PPTPTPTPKITATATFSPS-KRRLTS--------QITPPRKLQKLLEPSSSS---LHQRF 76

Query: 230 LSKLLVPASS--PPRKSLPQNPTYTPLELQVVDLRSKHPDVVLMFEVGYRYRFFGQDAEI 57
           L K L P+S   PP  S  +  TYTPLE QV+ LR+KHPDV+LM EVGYRYRFF QDAE 
Sbjct: 77  LHKFLEPSSPQHPPLPSSSKRLTYTPLEQQVLHLRAKHPDVLLMVEVGYRYRFFAQDAEH 136

Query: 56  AARVLGIFAHVDHNFLTA 3
           AARVLGI+AH+DHNFLTA
Sbjct: 137 AARVLGIYAHMDHNFLTA 154


>gb|ESW15389.1| hypothetical protein PHAVU_007G069100g [Phaseolus vulgaris]
          Length = 851

 Score =  127 bits (318), Expect = 2e-27
 Identities = 77/138 (55%), Positives = 88/138 (63%), Gaps = 2/138 (1%)
 Frame = -1

Query: 410 PPPSRSSPKISATVSLSPSAKRRLQSLYXXXXXXXXXXXXXXXXALVPVPSSTPDLHRRF 231
           PP    +PKI+AT + SPS KRRL S                   L P  SS   LH+RF
Sbjct: 29  PPTPTPTPKITATATFSPS-KRRLTS--------QITPPRKLQKLLEPSSSS---LHQRF 76

Query: 230 LSKLLVPASS--PPRKSLPQNPTYTPLELQVVDLRSKHPDVVLMFEVGYRYRFFGQDAEI 57
           L K L P+S   PP  S  +  TYTPLE QV+ LR+KHPDV+LM EVGYRYRFF QDAE 
Sbjct: 77  LHKFLEPSSPQHPPLPSSSKRLTYTPLEQQVLHLRAKHPDVLLMVEVGYRYRFFAQDAEH 136

Query: 56  AARVLGIFAHVDHNFLTA 3
           AARVLGI+AH+DHNFLTA
Sbjct: 137 AARVLGIYAHMDHNFLTA 154


>ref|NP_194284.2| DNA mismatch repair protein MSH3 [Arabidopsis thaliana]
           gi|12644077|sp|O65607.2|MSH3_ARATH RecName: Full=DNA
           mismatch repair protein MSH3; Short=AtMSH3; AltName:
           Full=MutS protein homolog 3 gi|3319876|emb|CAA07684.1|
           Msh3 protein [Arabidopsis thaliana]
           gi|332659675|gb|AEE85075.1| DNA mismatch repair protein
           MSH3 [Arabidopsis thaliana]
          Length = 1081

 Score =  126 bits (317), Expect = 3e-27
 Identities = 74/136 (54%), Positives = 91/136 (66%), Gaps = 3/136 (2%)
 Frame = -1

Query: 401 SRSSPKISATVSLSPSAKRRLQSLYXXXXXXXXXXXXXXXXALVPVPSSTPDLHRRFLSK 222
           S   PKISATVS SPS KR+L S +                  VP     P+LH+RFL +
Sbjct: 31  STPPPKISATVSFSPS-KRKLLSDHLAAASPKKPKLSPHTQNPVP----DPNLHQRFLQR 85

Query: 221 LLVPASSPPRKSLPQNPT---YTPLELQVVDLRSKHPDVVLMFEVGYRYRFFGQDAEIAA 51
            L P+   P + +P+  +   YTPLE QVV+L+SK+PDVVLM EVGYRYRFFG+DAEIAA
Sbjct: 86  FLEPS---PEEYVPETSSSRKYTPLEQQVVELKSKYPDVVLMVEVGYRYRFFGEDAEIAA 142

Query: 50  RVLGIFAHVDHNFLTA 3
           RVLGI+AH+DHNF+TA
Sbjct: 143 RVLGIYAHMDHNFMTA 158


>emb|CAB81364.1| putative DNA mismatch repair protein [Arabidopsis thaliana]
          Length = 1076

 Score =  126 bits (317), Expect = 3e-27
 Identities = 74/136 (54%), Positives = 91/136 (66%), Gaps = 3/136 (2%)
 Frame = -1

Query: 401 SRSSPKISATVSLSPSAKRRLQSLYXXXXXXXXXXXXXXXXALVPVPSSTPDLHRRFLSK 222
           S   PKISATVS SPS KR+L S +                  VP     P+LH+RFL +
Sbjct: 31  STPPPKISATVSFSPS-KRKLLSDHLAAASPKKPKLSPHTQNPVP----DPNLHQRFLQR 85

Query: 221 LLVPASSPPRKSLPQNPT---YTPLELQVVDLRSKHPDVVLMFEVGYRYRFFGQDAEIAA 51
            L P+   P + +P+  +   YTPLE QVV+L+SK+PDVVLM EVGYRYRFFG+DAEIAA
Sbjct: 86  FLEPS---PEEYVPETSSSRKYTPLEQQVVELKSKYPDVVLMVEVGYRYRFFGEDAEIAA 142

Query: 50  RVLGIFAHVDHNFLTA 3
           RVLGI+AH+DHNF+TA
Sbjct: 143 RVLGIYAHMDHNFMTA 158


>emb|CAA18172.1| putative DNA mismatch repair protein [Arabidopsis thaliana]
          Length = 1076

 Score =  126 bits (317), Expect = 3e-27
 Identities = 74/136 (54%), Positives = 91/136 (66%), Gaps = 3/136 (2%)
 Frame = -1

Query: 401 SRSSPKISATVSLSPSAKRRLQSLYXXXXXXXXXXXXXXXXALVPVPSSTPDLHRRFLSK 222
           S   PKISATVS SPS KR+L S +                  VP     P+LH+RFL +
Sbjct: 31  STPPPKISATVSFSPS-KRKLLSDHLAAASPKKPKLSPHTQNPVP----DPNLHQRFLQR 85

Query: 221 LLVPASSPPRKSLPQNPT---YTPLELQVVDLRSKHPDVVLMFEVGYRYRFFGQDAEIAA 51
            L P+   P + +P+  +   YTPLE QVV+L+SK+PDVVLM EVGYRYRFFG+DAEIAA
Sbjct: 86  FLEPS---PEEYVPETSSSRKYTPLEQQVVELKSKYPDVVLMVEVGYRYRFFGEDAEIAA 142

Query: 50  RVLGIFAHVDHNFLTA 3
           RVLGI+AH+DHNF+TA
Sbjct: 143 RVLGIYAHMDHNFMTA 158


>ref|XP_002867605.1| hypothetical protein ARALYDRAFT_492273 [Arabidopsis lyrata subsp.
           lyrata] gi|297313441|gb|EFH43864.1| hypothetical protein
           ARALYDRAFT_492273 [Arabidopsis lyrata subsp. lyrata]
          Length = 1078

 Score =  126 bits (316), Expect = 3e-27
 Identities = 73/140 (52%), Positives = 92/140 (65%), Gaps = 4/140 (2%)
 Frame = -1

Query: 410 PPPSRSSPKISATVSLSPSAKRRLQSLYXXXXXXXXXXXXXXXXALVPVPSSTPDLHRRF 231
           P  S   PKISATVS SPS KR+L S +                  +P     P+LH+RF
Sbjct: 28  PESSTPPPKISATVSFSPS-KRKLLSDHLAAASPKKPKLSPHTQNPIP----DPNLHQRF 82

Query: 230 LSKLLVPASSPPRKSLPQNPT----YTPLELQVVDLRSKHPDVVLMFEVGYRYRFFGQDA 63
           L + L P+   P +S+P+  +    YTPLE QVV+L+ K+PDVVLM EVGYRYRFFG+DA
Sbjct: 83  LQRFLEPS---PEESVPETSSSSRKYTPLEQQVVELKRKYPDVVLMVEVGYRYRFFGEDA 139

Query: 62  EIAARVLGIFAHVDHNFLTA 3
           EIAARVLGI+AH+DH+F+TA
Sbjct: 140 EIAARVLGIYAHMDHSFMTA 159


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