BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00043794
         (629 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB46043.1| retrotransposon like protein [Arabidopsis thalia...    83   4e-32
gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis tha...    80   1e-31
emb|CAN62533.1| hypothetical protein VITISV_030700 [Vitis vinifera]    84   2e-31
gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]               82   6e-31
emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]    81   8e-31
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]                     75   1e-30
emb|CAN66625.1| hypothetical protein VITISV_032065 [Vitis vinifera]    79   3e-30
dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|...    79   4e-30
dbj|BAK41507.1| polyprotein [Arabidopsis thaliana]                     79   4e-30
dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana]     82   4e-30
emb|CAN70473.1| hypothetical protein VITISV_037490 [Vitis vinifera]    79   7e-30
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal...    80   2e-28
dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]                     80   2e-28
gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis tha...    80   2e-28
dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]                     80   2e-28
emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]    80   2e-28
dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis th...    80   2e-28
emb|CAN64509.1| hypothetical protein VITISV_041217 [Vitis vinifera]    79   6e-28
gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retr...    75   1e-27
gb|AAC02672.1| polyprotein [Arabidopsis arenosa]                       79   2e-27

>emb|CAB46043.1| retrotransposon like protein [Arabidopsis thaliana]
           gi|7268438|emb|CAB80958.1| retrotransposon like protein
           [Arabidopsis thaliana]
          Length = 1474

 Score = 83.2 bits (204), Expect(3) = 4e-32
 Identities = 46/86 (53%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   LALKEFLSLHGISHLTTP-HTPEHNGFSERGHCHIVKTSLALLHQTSVXXXXXXXXXXXX 177
           +AL+EFL  +GISHLT+P HTPEHNG SER H HIV+T L LL Q SV            
Sbjct: 599 IALREFLVSNGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLTQASVPREYWPYAFAAA 658

Query: 178 XYLINRLPKHNLSYKSSFECLFAPVP 255
            YLINR+P   LS +S F+ LF   P
Sbjct: 659 VYLINRMPTPVLSMESPFQKLFGSKP 684



 Score = 70.5 bits (171), Expect(3) = 4e-32
 Identities = 28/50 (56%), Positives = 36/50 (72%)
 Frame = +2

Query: 275 IFGCLCYPWPRPYASHKLAHRSLPCVFLGYSLMQSVYLCYEFSFGKIYLS 424
           +FGCLC+PW RPY  +KL  RS  CVFLGYSL Q+ YLC++    ++Y S
Sbjct: 691 VFGCLCFPWLRPYTHNKLEERSRRCVFLGYSLTQTAYLCFDVEHKRLYTS 740



 Score = 31.2 bits (69), Expect(3) = 4e-32
 Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
 Frame = +3

Query: 414 FISRNVIFVESEFPFASGGFSAGLLPEAL---HSMPLEDSRVADSSPISSFNPCLVSP-- 578
           + SR+V+F E+ FPF S   S   LP       S PL    ++ SS + S   CL SP  
Sbjct: 738 YTSRHVVFDEASFPF-SNLTSQNSLPTVTFEQSSSPLVTPILSSSSVLPS---CLSSPCT 793

Query: 579 IVHRPVPTESPPAEP 623
           ++H+  P  + P  P
Sbjct: 794 VLHQQQPPVTTPNSP 808


>gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis thaliana]
           gi|225898008|dbj|BAH30336.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 1459

 Score = 80.1 bits (196), Expect(3) = 1e-31
 Identities = 44/86 (51%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   LALKEFLSLHGISHLTTP-HTPEHNGFSERGHCHIVKTSLALLHQTSVXXXXXXXXXXXX 177
           +AL++FL  +GISHLT+P HTPEHNG SER H HIV+T L LL Q SV            
Sbjct: 604 IALRDFLVSNGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLTQASVPREYWTYAFATA 663

Query: 178 XYLINRLPKHNLSYKSSFECLFAPVP 255
            YLINR+P   L  +S F+ LF   P
Sbjct: 664 VYLINRMPTPVLCLQSPFQKLFGSSP 689



 Score = 68.9 bits (167), Expect(3) = 1e-31
 Identities = 28/50 (56%), Positives = 35/50 (70%)
 Frame = +2

Query: 275 IFGCLCYPWPRPYASHKLAHRSLPCVFLGYSLMQSVYLCYEFSFGKIYLS 424
           +FGCLC+PW RPY  +KL  RS  CVFLGYSL Q+ YLC +    ++Y S
Sbjct: 696 VFGCLCFPWLRPYTRNKLEERSKRCVFLGYSLTQTAYLCLDVDNNRLYTS 745



 Score = 34.3 bits (77), Expect(3) = 1e-31
 Identities = 21/70 (30%), Positives = 34/70 (48%)
 Frame = +3

Query: 414 FISRNVIFVESEFPFASGGFSAGLLPEALHSMPLEDSRVADSSPISSFNPCLVSPIVHRP 593
           + SR+V+F ES +PFA     A +  ++  S+       + SSP +S  PC V  +   P
Sbjct: 743 YTSRHVMFDESTYPFA-----ASIREQSQSSLVTPPESSSSSSPANSGFPCSVLRLQSPP 797

Query: 594 VPTESPPAEP 623
             +   P+ P
Sbjct: 798 ASSPETPSPP 807


>emb|CAN62533.1| hypothetical protein VITISV_030700 [Vitis vinifera]
          Length = 731

 Score = 84.3 bits (207), Expect(2) = 2e-31
 Identities = 43/82 (52%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   LALKEFLSLHGISHLTTP-HTPEHNGFSERGHCHIVKTSLALLHQTSVXXXXXXXXXXXX 177
           ++L  FL+LHGISHLTTP HTPEHNGFSER H HIV+T L LL   S+            
Sbjct: 420 ISLSNFLALHGISHLTTPPHTPEHNGFSERCHLHIVETGLTLLSHASIPLPYWSNAFAIA 479

Query: 178 XYLINRLPKHNLSYKSSFECLF 243
            YLINR+P   L+  S +E +F
Sbjct: 480 IYLINRMPTPTLNLLSPYEKIF 501



 Score = 77.8 bits (190), Expect(2) = 2e-31
 Identities = 33/50 (66%), Positives = 38/50 (76%)
 Frame = +2

Query: 275 IFGCLCYPWPRPYASHKLAHRSLPCVFLGYSLMQSVYLCYEFSFGKIYLS 424
           IFGCLCYPW RPY+SHKL   S PC+FLGYSL QS Y CY+ S  K ++S
Sbjct: 512 IFGCLCYPWLRPYSSHKLDSSSKPCIFLGYSLTQSAYFCYDPSTSKNFVS 561


>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
          Length = 1534

 Score = 82.0 bits (201), Expect(2) = 6e-31
 Identities = 46/100 (46%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
 Frame = +1

Query: 1   LALKEFLSLHGISHLTT-PHTPEHNGFSERGHCHIVKTSLALLHQTSVXXXXXXXXXXXX 177
           +AL++FL  HGISHLT+ PHTPEHNG +ER H HI++T L LL Q S+            
Sbjct: 691 IALRQFLLTHGISHLTSLPHTPEHNGIAERKHRHILETGLTLLTQASIPTSYWTYAFGTA 750

Query: 178 XYLINRLPKHNLSYKSSFECLFAPVPLPLPPMYFWLSLLP 297
            YLINRLP   L+ +S +  LF   P  L    F  S  P
Sbjct: 751 VYLINRLPSSVLNNESPYSKLFKTSPNYLKLRVFGCSCFP 790



 Score = 78.6 bits (192), Expect(2) = 6e-31
 Identities = 32/50 (64%), Positives = 38/50 (76%)
 Frame = +2

Query: 275 IFGCLCYPWPRPYASHKLAHRSLPCVFLGYSLMQSVYLCYEFSFGKIYLS 424
           +FGC C+PW RPY +HKL  RS PCVFLGYSL QS YLC + S G++Y S
Sbjct: 783 VFGCSCFPWLRPYTNHKLERRSQPCVFLGYSLTQSAYLCLDRSSGRVYTS 832


>emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]
          Length = 1354

 Score = 80.9 bits (198), Expect(2) = 8e-31
 Identities = 44/86 (51%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   LALKEFLSLHGISHLTTP-HTPEHNGFSERGHCHIVKTSLALLHQTSVXXXXXXXXXXXX 177
           + LK++LSL  ISH TTP HTPEHNG+SER H HIV+T L LL   S+            
Sbjct: 572 MVLKDYLSLXXISHFTTPPHTPEHNGYSERRHRHIVETGLTLLSHASLPNTFXPHAFATA 631

Query: 178 XYLINRLPKHNLSYKSSFECLFAPVP 255
            YLINRLP   L+  S FE +F   P
Sbjct: 632 VYLINRLPTTTLNLSSPFELIFHKSP 657



 Score = 79.3 bits (194), Expect(2) = 8e-31
 Identities = 33/50 (66%), Positives = 38/50 (76%)
 Frame = +2

Query: 275 IFGCLCYPWPRPYASHKLAHRSLPCVFLGYSLMQSVYLCYEFSFGKIYLS 424
           +FGCLCYPW RPY +HKL   S PCVFLGYSL QS YLC + S  K+Y+S
Sbjct: 664 VFGCLCYPWLRPYXTHKLTPXSKPCVFLGYSLSQSAYLCLDXSTSKLYVS 713


>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
          Length = 1429

 Score = 75.1 bits (183), Expect(3) = 1e-30
 Identities = 41/86 (47%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   LALKEFLSLHGISHLTTP-HTPEHNGFSERGHCHIVKTSLALLHQTSVXXXXXXXXXXXX 177
           + L+ FL+ HGISHLT+P HTPEHNG +ER H HIV+T LALL   S+            
Sbjct: 581 IGLRPFLAAHGISHLTSPPHTPEHNGLAERKHRHIVETGLALLTHASLPKTFWTYAFATA 640

Query: 178 XYLINRLPKHNLSYKSSFECLFAPVP 255
            YLINR+P   L   S +  LF   P
Sbjct: 641 VYLINRMPTEVLQGTSPYVKLFQMSP 666



 Score = 73.2 bits (178), Expect(3) = 1e-30
 Identities = 31/50 (62%), Positives = 37/50 (74%)
 Frame = +2

Query: 275 IFGCLCYPWPRPYASHKLAHRSLPCVFLGYSLMQSVYLCYEFSFGKIYLS 424
           +FGCLCYPW RPY ++KL  RS  CVFLGYSL QS YLC + +  +IY S
Sbjct: 673 VFGCLCYPWLRPYNTNKLEARSTMCVFLGYSLTQSAYLCLDIATNRIYTS 722



 Score = 32.0 bits (71), Expect(3) = 1e-30
 Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
 Frame = +3

Query: 414 FISRNVIFVESEFPFASGGFS------AGLLPEALHSMPLEDSRVADSSPISSFNPCLVS 575
           + SR+V FVES FPFAS   S          P   + +PL   R    +P ++   C   
Sbjct: 720 YTSRHVQFVESSFPFASPRTSETDSTQTMSQPTTTNVIPLL-QRPPHIAPPTALPLC--- 775

Query: 576 PIVHRPVPTESPPAEP 623
           PI H P  + S PA P
Sbjct: 776 PIFHSPPHSPSSPASP 791


>emb|CAN66625.1| hypothetical protein VITISV_032065 [Vitis vinifera]
          Length = 555

 Score = 79.3 bits (194), Expect(3) = 3e-30
 Identities = 43/86 (50%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   LALKEFLSLHGISHLTT-PHTPEHNGFSERGHCHIVKTSLALLHQTSVXXXXXXXXXXXX 177
           LAL+ FL  HGI+HLTT PHTPEHNG+SER H HIV+T L LL   S+            
Sbjct: 385 LALQTFLITHGITHLTTLPHTPEHNGYSERRHRHIVETGLTLLSHASLPLTFWTHVFATT 444

Query: 178 XYLINRLPKHNLSYKSSFECLFAPVP 255
            YLINR P   L+  S +E  F   P
Sbjct: 445 VYLINRKPTLTLNLSSPYENFFGSPP 470



 Score = 77.0 bits (188), Expect(3) = 3e-30
 Identities = 33/50 (66%), Positives = 38/50 (76%)
 Frame = +2

Query: 275 IFGCLCYPWPRPYASHKLAHRSLPCVFLGYSLMQSVYLCYEFSFGKIYLS 424
           IFGCLCYPW RPY+SHKL  RS PC+FLGYSL QS YL Y     ++Y+S
Sbjct: 477 IFGCLCYPWLRPYSSHKLESRSKPCIFLGYSLTQSAYLYYHPPTSRMYVS 526



 Score = 22.3 bits (46), Expect(3) = 3e-30
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 414 FISRNVIFVESEFP 455
           ++SR++ FVES FP
Sbjct: 524 YVSRHIKFVESVFP 537


>dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|dbj|BAK41505.1|
           polyprotein [Arabidopsis thaliana]
           gi|338746553|dbj|BAK41506.1| polyprotein [Arabidopsis
           thaliana] gi|338746557|dbj|BAK41508.1| polyprotein
           [Arabidopsis thaliana] gi|338746559|dbj|BAK41509.1|
           polyprotein [Arabidopsis thaliana]
          Length = 1447

 Score = 79.3 bits (194), Expect(3) = 4e-30
 Identities = 43/86 (50%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   LALKEFLSLHGISHLTTP-HTPEHNGFSERGHCHIVKTSLALLHQTSVXXXXXXXXXXXX 177
           +AL+E+ S HGISHLT+P HTPEHNG SER H HIV+T L LL   S+            
Sbjct: 579 VALREYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVA 638

Query: 178 XYLINRLPKHNLSYKSSFECLFAPVP 255
            YLINRLP   L  +S  + LF   P
Sbjct: 639 VYLINRLPTPLLQLESPCQKLFGTSP 664



 Score = 72.4 bits (176), Expect(3) = 4e-30
 Identities = 30/50 (60%), Positives = 34/50 (68%)
 Frame = +2

Query: 275 IFGCLCYPWPRPYASHKLAHRSLPCVFLGYSLMQSVYLCYEFSFGKIYLS 424
           +FGC CYPW RPY  HKL  +S  CVFLGYSL QS YLC      +IY+S
Sbjct: 671 VFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRIYIS 720



 Score = 26.6 bits (57), Expect(3) = 4e-30
 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
 Frame = +3

Query: 414 FISRNVIFVESEFPFASGGFSAGLLPEALHSMPLEDSRV-ADSSPISSFNPCLVSPIVHR 590
           +ISR+V F E+ FPF++  + A L P  +     E S V +  + + +  P L +P    
Sbjct: 718 YISRHVRFDENCFPFSN--YLATLSP--VQEQRRESSCVWSPHTTLPTRTPVLPAPSCSD 773

Query: 591 PVPTESPPAEP 623
           P    +PP+ P
Sbjct: 774 PHHAATPPSSP 784


>dbj|BAK41507.1| polyprotein [Arabidopsis thaliana]
          Length = 1447

 Score = 79.3 bits (194), Expect(3) = 4e-30
 Identities = 43/86 (50%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   LALKEFLSLHGISHLTTP-HTPEHNGFSERGHCHIVKTSLALLHQTSVXXXXXXXXXXXX 177
           +AL+E+ S HGISHLT+P HTPEHNG SER H HIV+T L LL   S+            
Sbjct: 579 VALREYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVA 638

Query: 178 XYLINRLPKHNLSYKSSFECLFAPVP 255
            YLINRLP   L  +S  + LF   P
Sbjct: 639 VYLINRLPTPLLQLESPCQKLFGTSP 664



 Score = 72.4 bits (176), Expect(3) = 4e-30
 Identities = 30/50 (60%), Positives = 34/50 (68%)
 Frame = +2

Query: 275 IFGCLCYPWPRPYASHKLAHRSLPCVFLGYSLMQSVYLCYEFSFGKIYLS 424
           +FGC CYPW RPY  HKL  +S  CVFLGYSL QS YLC      +IY+S
Sbjct: 671 VFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRIYIS 720



 Score = 26.6 bits (57), Expect(3) = 4e-30
 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
 Frame = +3

Query: 414 FISRNVIFVESEFPFASGGFSAGLLPEALHSMPLEDSRV-ADSSPISSFNPCLVSPIVHR 590
           +ISR+V F E+ FPF++  + A L P  +     E S V +  + + +  P L +P    
Sbjct: 718 YISRHVRFDENCFPFSN--YLATLSP--VQEQRRESSCVWSPHTTLPTRTPVLPAPSCSD 773

Query: 591 PVPTESPPAEP 623
           P    +PP+ P
Sbjct: 774 PHHAATPPSSP 784


>dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana]
          Length = 1048

 Score = 82.4 bits (202), Expect(3) = 4e-30
 Identities = 44/86 (51%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   LALKEFLSLHGISHLTTP-HTPEHNGFSERGHCHIVKTSLALLHQTSVXXXXXXXXXXXX 177
           +AL+E+ S HGISHLT+P HTPEHNG SER H HIV+T L LL   S+            
Sbjct: 593 VALREYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVA 652

Query: 178 XYLINRLPKHNLSYKSSFECLFAPVP 255
            YLINRLP   L  +S F+ LF   P
Sbjct: 653 VYLINRLPTPLLQLESPFQKLFGTSP 678



 Score = 72.4 bits (176), Expect(3) = 4e-30
 Identities = 30/50 (60%), Positives = 34/50 (68%)
 Frame = +2

Query: 275 IFGCLCYPWPRPYASHKLAHRSLPCVFLGYSLMQSVYLCYEFSFGKIYLS 424
           +FGC CYPW RPY  HKL  +S  CVFLGYSL QS YLC      +IY+S
Sbjct: 685 VFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRIYIS 734



 Score = 23.5 bits (49), Expect(3) = 4e-30
 Identities = 21/66 (31%), Positives = 33/66 (50%)
 Frame = +3

Query: 414 FISRNVIFVESEFPFASGGFSAGLLPEALHSMPLEDSRVADSSPISSFNPCLVSPIVHRP 593
           +ISR+V F E+ FPF++  + A L        P+++ R   S        C+ SP  H  
Sbjct: 732 YISRHVRFDENCFPFSN--YLATL-------SPVQEQRRESS--------CVWSP--HTT 772

Query: 594 VPTESP 611
           +PT +P
Sbjct: 773 LPTRTP 778


>emb|CAN70473.1| hypothetical protein VITISV_037490 [Vitis vinifera]
          Length = 786

 Score = 79.0 bits (193), Expect(2) = 7e-30
 Identities = 41/86 (47%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   LALKEFLSLHGISHLTTP-HTPEHNGFSERGHCHIVKTSLALLHQTSVXXXXXXXXXXXX 177
           LAL+ FL+ HGI+HL+TP HTPEHNG+SER H HIV+  L LL   S             
Sbjct: 293 LALRTFLATHGITHLSTPPHTPEHNGYSERRHRHIVEIGLTLLSHASFSLTFWTHVFATA 352

Query: 178 XYLINRLPKHNLSYKSSFECLFAPVP 255
            YLINR+P   L+  S +E +F   P
Sbjct: 353 VYLINRMPTPTLNLSSPYENIFGSPP 378



 Score = 78.2 bits (191), Expect(2) = 7e-30
 Identities = 33/50 (66%), Positives = 38/50 (76%)
 Frame = +2

Query: 275 IFGCLCYPWPRPYASHKLAHRSLPCVFLGYSLMQSVYLCYEFSFGKIYLS 424
           IFGCLCYPW RPY+S KL  RS PC+FLGYSL QS YLCY     ++Y+S
Sbjct: 385 IFGCLCYPWLRPYSSRKLESRSKPCIFLGYSLTQSAYLCYHPPTSRMYVS 434


>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
           gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
           thaliana]
          Length = 1466

 Score = 80.5 bits (197), Expect(2) = 2e-28
 Identities = 44/86 (51%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   LALKEFLSLHGISHLTTP-HTPEHNGFSERGHCHIVKTSLALLHQTSVXXXXXXXXXXXX 177
           +AL E+ S HGISHLT+P HTPEHNG SER H HIV+T L LL   S+            
Sbjct: 598 VALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVA 657

Query: 178 XYLINRLPKHNLSYKSSFECLFAPVP 255
            YLINRLP   L  +S F+ LF   P
Sbjct: 658 VYLINRLPTPLLQLESPFQKLFGTSP 683



 Score = 71.6 bits (174), Expect(2) = 2e-28
 Identities = 29/50 (58%), Positives = 34/50 (68%)
 Frame = +2

Query: 275 IFGCLCYPWPRPYASHKLAHRSLPCVFLGYSLMQSVYLCYEFSFGKIYLS 424
           +FGC CYPW RPY  HKL  +S  CVFLGYSL QS YLC      ++Y+S
Sbjct: 690 VFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYIS 739


>dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score = 80.5 bits (197), Expect(2) = 2e-28
 Identities = 44/86 (51%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   LALKEFLSLHGISHLTTP-HTPEHNGFSERGHCHIVKTSLALLHQTSVXXXXXXXXXXXX 177
           +AL E+ S HGISHLT+P HTPEHNG SER H HIV+T L LL   S+            
Sbjct: 598 VALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVA 657

Query: 178 XYLINRLPKHNLSYKSSFECLFAPVP 255
            YLINRLP   L  +S F+ LF   P
Sbjct: 658 VYLINRLPTPLLQLESPFQKLFGTSP 683



 Score = 71.6 bits (174), Expect(2) = 2e-28
 Identities = 29/50 (58%), Positives = 34/50 (68%)
 Frame = +2

Query: 275 IFGCLCYPWPRPYASHKLAHRSLPCVFLGYSLMQSVYLCYEFSFGKIYLS 424
           +FGC CYPW RPY  HKL  +S  CVFLGYSL QS YLC      ++Y+S
Sbjct: 690 VFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYIS 739


>gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis thaliana]
           gi|338746561|dbj|BAK41510.1| polyprotein [Arabidopsis
           thaliana]
          Length = 1466

 Score = 80.5 bits (197), Expect(2) = 2e-28
 Identities = 44/86 (51%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   LALKEFLSLHGISHLTTP-HTPEHNGFSERGHCHIVKTSLALLHQTSVXXXXXXXXXXXX 177
           +AL E+ S HGISHLT+P HTPEHNG SER H HIV+T L LL   S+            
Sbjct: 598 VALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVA 657

Query: 178 XYLINRLPKHNLSYKSSFECLFAPVP 255
            YLINRLP   L  +S F+ LF   P
Sbjct: 658 VYLINRLPTPLLQLESPFQKLFGTSP 683



 Score = 71.6 bits (174), Expect(2) = 2e-28
 Identities = 29/50 (58%), Positives = 34/50 (68%)
 Frame = +2

Query: 275 IFGCLCYPWPRPYASHKLAHRSLPCVFLGYSLMQSVYLCYEFSFGKIYLS 424
           +FGC CYPW RPY  HKL  +S  CVFLGYSL QS YLC      ++Y+S
Sbjct: 690 VFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYIS 739


>dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]
          Length = 1431

 Score = 80.5 bits (197), Expect(2) = 2e-28
 Identities = 44/86 (51%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   LALKEFLSLHGISHLTTP-HTPEHNGFSERGHCHIVKTSLALLHQTSVXXXXXXXXXXXX 177
           +AL E+ S HGISHLT+P HTPEHNG SER H HIV+T L LL   S+            
Sbjct: 563 VALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVA 622

Query: 178 XYLINRLPKHNLSYKSSFECLFAPVP 255
            YLINRLP   L  +S F+ LF   P
Sbjct: 623 VYLINRLPTPLLQLESPFQKLFGTSP 648



 Score = 71.6 bits (174), Expect(2) = 2e-28
 Identities = 29/50 (58%), Positives = 34/50 (68%)
 Frame = +2

Query: 275 IFGCLCYPWPRPYASHKLAHRSLPCVFLGYSLMQSVYLCYEFSFGKIYLS 424
           +FGC CYPW RPY  HKL  +S  CVFLGYSL QS YLC      ++Y+S
Sbjct: 655 VFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYIS 704


>emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]
          Length = 1112

 Score = 80.5 bits (197), Expect(2) = 2e-28
 Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
 Frame = +1

Query: 4   ALKEFLSLHGISHLTTP-HTPEHNGFSERGHCHIVKTSLALLHQTSVXXXXXXXXXXXXX 180
           AL  FL+++G+SHLT+P HTPEHNG+SER H HIV+T L+LL   S+             
Sbjct: 356 ALSSFLTINGVSHLTSPPHTPEHNGYSERRHRHIVETGLSLLTHASMPLSYWPFAFSTTV 415

Query: 181 YLINRLPKHNLSYKSSFECLFAPVP 255
           YLINRLP   L++ SS+  LF   P
Sbjct: 416 YLINRLPTPTLNHLSSYFKLFGTFP 440



 Score = 71.6 bits (174), Expect(2) = 2e-28
 Identities = 30/49 (61%), Positives = 35/49 (71%)
 Frame = +2

Query: 278 FGCLCYPWPRPYASHKLAHRSLPCVFLGYSLMQSVYLCYEFSFGKIYLS 424
           FGCLCYPW RPY S KL  RS PC+F+GYS  QS YLC + S  ++Y S
Sbjct: 448 FGCLCYPWLRPYTSPKLESRSSPCIFVGYSPTQSAYLCLDTSTARLYTS 496


>dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis thaliana]
          Length = 847

 Score = 80.5 bits (197), Expect(2) = 2e-28
 Identities = 44/86 (51%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   LALKEFLSLHGISHLTTP-HTPEHNGFSERGHCHIVKTSLALLHQTSVXXXXXXXXXXXX 177
           +AL E+ S HGISHLT+P HTPEHNG SER H HIV+T L LL   S+            
Sbjct: 563 VALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVA 622

Query: 178 XYLINRLPKHNLSYKSSFECLFAPVP 255
            YLINRLP   L  +S F+ LF   P
Sbjct: 623 VYLINRLPTPLLQLESPFQKLFGTSP 648



 Score = 71.6 bits (174), Expect(2) = 2e-28
 Identities = 29/50 (58%), Positives = 34/50 (68%)
 Frame = +2

Query: 275 IFGCLCYPWPRPYASHKLAHRSLPCVFLGYSLMQSVYLCYEFSFGKIYLS 424
           +FGC CYPW RPY  HKL  +S  CVFLGYSL QS YLC      ++Y+S
Sbjct: 655 VFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYIS 704


>emb|CAN64509.1| hypothetical protein VITISV_041217 [Vitis vinifera]
          Length = 1269

 Score = 78.6 bits (192), Expect(2) = 6e-28
 Identities = 41/85 (48%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
 Frame = +1

Query: 4   ALKEFLSLHGISHLTTP-HTPEHNGFSERGHCHIVKTSLALLHQTSVXXXXXXXXXXXXX 180
           AL  FL+++G+SHLT+P HTPEHNG+SER H HIV+T L+LL   S+             
Sbjct: 570 ALSSFLTINGVSHLTSPPHTPEHNGYSERRHRHIVETGLSLLTHASMPLSYWPFAFSTAV 629

Query: 181 YLINRLPKHNLSYKSSFECLFAPVP 255
           YLINRLP   L++ S +  LF   P
Sbjct: 630 YLINRLPTPTLNHLSPYFKLFGTFP 654



 Score = 72.0 bits (175), Expect(2) = 6e-28
 Identities = 31/49 (63%), Positives = 35/49 (71%)
 Frame = +2

Query: 278 FGCLCYPWPRPYASHKLAHRSLPCVFLGYSLMQSVYLCYEFSFGKIYLS 424
           FGCL YPW RPY SHKL  RS PCVF+GYS  QS YLC + S  ++Y S
Sbjct: 662 FGCLXYPWLRPYTSHKLESRSSPCVFVGYSPTQSAYLCLDTSTARLYTS 710


>gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retrotransposon
           polyprotein from Arabidopsis arenosa [Arabidopsis
           thaliana]
          Length = 1194

 Score = 75.1 bits (183), Expect(2) = 1e-27
 Identities = 41/86 (47%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   LALKEFLSLHGISHLTTP-HTPEHNGFSERGHCHIVKTSLALLHQTSVXXXXXXXXXXXX 177
           +AL+ FLS +GI+HLTTP HTPEHNG SER H HIV+T L LL Q S+            
Sbjct: 555 IALRSFLSSNGITHLTTPPHTPEHNGISERKHRHIVETGLTLLGQASMPKSYWSYAFTIA 614

Query: 178 XYLINRLPKHNLSYKSSFECLFAPVP 255
            YLINR+    +   S ++ LF   P
Sbjct: 615 IYLINRMSSDVIGGISPYKRLFGQAP 640



 Score = 74.3 bits (181), Expect(2) = 1e-27
 Identities = 30/50 (60%), Positives = 36/50 (72%)
 Frame = +2

Query: 275 IFGCLCYPWPRPYASHKLAHRSLPCVFLGYSLMQSVYLCYEFSFGKIYLS 424
           +FGCLC+PW RPY +HKL  R  PCVFLGYS  QS YLC   + G++Y S
Sbjct: 647 VFGCLCFPWLRPYTTHKLDDRPAPCVFLGYSQTQSAYLCLNRTTGRVYTS 696


>gb|AAC02672.1| polyprotein [Arabidopsis arenosa]
          Length = 1390

 Score = 79.0 bits (193), Expect(2) = 2e-27
 Identities = 31/50 (62%), Positives = 40/50 (80%)
 Frame = +2

Query: 275 IFGCLCYPWPRPYASHKLAHRSLPCVFLGYSLMQSVYLCYEFSFGKIYLS 424
           +FGCLC+PW RPY +HKL +RS+PCV LGYSL QS YLC + + G++Y S
Sbjct: 692 VFGCLCFPWLRPYTAHKLDNRSMPCVLLGYSLSQSAYLCLDRATGRVYTS 741



 Score = 70.1 bits (170), Expect(2) = 2e-27
 Identities = 40/86 (46%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   LALKEFLSLHGISHLTTP-HTPEHNGFSERGHCHIVKTSLALLHQTSVXXXXXXXXXXXX 177
           +AL+ FL+ HGISH+TTP HTPE NG SER H HIV+T L LL   S+            
Sbjct: 600 IALRSFLASHGISHMTTPPHTPELNGISERKHRHIVETGLTLLSTASMSKEYWSYAFTTA 659

Query: 178 XYLINRLPKHNLSYKSSFECLFAPVP 255
            YLINR+    L  +S +  LF   P
Sbjct: 660 VYLINRMLTPVLGNESPYMKLFGQPP 685