BLASTX nr result
ID: Zingiber25_contig00043788
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00043788
(318 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAZ04014.1| cytochrome b6 [Yucca schidigera] 51 1e-06
gb|AFU96014.1| PetB, partial (chloroplast) [Vismia ferruginea] 51 1e-06
gb|AFU95987.1| PetB, partial (chloroplast) [Goupia glabra] 50 1e-06
gb|AGW04695.1| cytochrome b6 [Matelea biflora] 50 2e-06
ref|XP_004228903.1| PREDICTED: photosystem II CP47 chlorophyll a... 50 2e-06
gb|ABU85419.1| cytochrome b6 [Musa acuminata] 50 2e-06
ref|YP_008815780.1| cytochrome b6 [Setaria italica] gi|555298072... 50 2e-06
ref|NP_043053.1| cytochrome b6 [Zea mays] gi|48478799|ref|YP_024... 50 2e-06
ref|YP_008992839.1| cytochrome b6 (chloroplast) [Gossypium stock... 50 2e-06
ref|YP_874682.1| cytochrome b6 [Hordeum vulgare subsp. vulgare] ... 50 2e-06
ref|YP_004841813.1| cytochrome b6 [Cucumis melo subsp. melo] gi|... 50 2e-06
ref|YP_008239121.1| cytochrome b6 (chloroplast) [Triticum monoco... 50 2e-06
gb|AAZ04013.1| cytochrome b6 [Typha latifolia] 50 2e-06
ref|XP_002457870.1| hypothetical protein SORBIDRAFT_03g017580 [S... 50 2e-06
emb|CAA32267.1| petB [Hordeum vulgare subsp. vulgare] gi|5213009... 50 2e-06
ref|YP_008757470.1| cytochrome b6 (chloroplast) [Oryza rufipogon... 50 2e-06
ref|YP_003097604.1| cytochrome b6 [Dendrocalamus latiflorus] gi|... 50 2e-06
ref|YP_002000515.1| cytochrome b6 [Brachypodium distachyon] gi|1... 50 2e-06
gb|ABU85327.1| cytochrome b6 [Elaeis oleifera] 50 2e-06
gb|ABI97446.1| cytochrome b6 [Cucumis sativus] 50 2e-06
>gb|AAZ04014.1| cytochrome b6 [Yucca schidigera]
Length = 224
Score = 51.2 bits (121), Expect(2) = 1e-06
Identities = 30/51 (58%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +3
Query: 93 FGFVARDLFMANFGQLI*SIHRWST--MVLLMILLVFCVSLAARFKKPREL 239
F V + ANFG LI S+HRWS MVL+MIL VF V L FKKPREL
Sbjct: 75 FSSVQYIMIEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPREL 125
Score = 26.6 bits (57), Expect(2) = 1e-06
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 245 VTSVVLAILTASFVVT 292
VT VVLA+LTASF VT
Sbjct: 128 VTGVVLAVLTASFGVT 143
>gb|AFU96014.1| PetB, partial (chloroplast) [Vismia ferruginea]
Length = 213
Score = 51.2 bits (121), Expect(2) = 1e-06
Identities = 30/51 (58%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +3
Query: 93 FGFVARDLFMANFGQLI*SIHRWST--MVLLMILLVFCVSLAARFKKPREL 239
F V + ANFG LI S+HRWS MVL+MIL VF V L FKKPREL
Sbjct: 64 FASVQYIMIEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPREL 114
Score = 26.6 bits (57), Expect(2) = 1e-06
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 245 VTSVVLAILTASFVVT 292
VT VVLA+LTASF VT
Sbjct: 117 VTGVVLAVLTASFGVT 132
>gb|AFU95987.1| PetB, partial (chloroplast) [Goupia glabra]
Length = 213
Score = 49.7 bits (117), Expect(2) = 1e-06
Identities = 28/41 (68%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Frame = +3
Query: 123 ANFGQLI*SIHRWST--MVLLMILLVFCVSLAARFKKPREL 239
ANFG LI S+HRWS MVL+MIL VF V L FKKPREL
Sbjct: 74 ANFGWLIRSVHRWSASMMVLMMILNVFRVYLNGGFKKPREL 114
Score = 28.1 bits (61), Expect(2) = 1e-06
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 245 VTSVVLAILTASFVVT 292
VTSVVLA+LTASF VT
Sbjct: 117 VTSVVLAVLTASFGVT 132
>gb|AGW04695.1| cytochrome b6 [Matelea biflora]
Length = 215
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 28/41 (68%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Frame = +3
Query: 123 ANFGQLI*SIHRWST--MVLLMILLVFCVSLAARFKKPREL 239
ANFG LI S+HRWS MVL+MIL VF V L FKKPREL
Sbjct: 76 ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPREL 116
Score = 26.9 bits (58), Expect(2) = 2e-06
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 236 INLVTSVVLAILTASFVVT 292
++ VT VVLA+LTASF VT
Sbjct: 116 LSWVTGVVLAVLTASFGVT 134
>ref|XP_004228903.1| PREDICTED: photosystem II CP47 chlorophyll apoprotein-like [Solanum
lycopersicum]
Length = 991
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 28/41 (68%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Frame = +3
Query: 123 ANFGQLI*SIHRWST--MVLLMILLVFCVSLAARFKKPREL 239
ANFG LI S+HRWS MVL+MIL VF V L FKKPREL
Sbjct: 690 ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPREL 730
Score = 26.6 bits (57), Expect(2) = 2e-06
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 245 VTSVVLAILTASFVVT 292
VT VVLA+LTASF VT
Sbjct: 733 VTGVVLAVLTASFGVT 748
>gb|ABU85419.1| cytochrome b6 [Musa acuminata]
Length = 236
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 28/41 (68%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Frame = +3
Query: 123 ANFGQLI*SIHRWST--MVLLMILLVFCVSLAARFKKPREL 239
ANFG LI S+HRWS MVL+MIL VF V L FKKPREL
Sbjct: 97 ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPREL 137
Score = 26.6 bits (57), Expect(2) = 2e-06
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 245 VTSVVLAILTASFVVT 292
VT VVLA+LTASF VT
Sbjct: 140 VTGVVLAVLTASFGVT 155
>ref|YP_008815780.1| cytochrome b6 [Setaria italica] gi|555298072|gb|AGZ13174.1|
cytochrome b6 [Setaria italica]
Length = 234
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 28/41 (68%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Frame = +3
Query: 123 ANFGQLI*SIHRWST--MVLLMILLVFCVSLAARFKKPREL 239
ANFG LI S+HRWS MVL+MIL VF V L FKKPREL
Sbjct: 95 ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPREL 135
Score = 26.6 bits (57), Expect(2) = 2e-06
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 245 VTSVVLAILTASFVVT 292
VT VVLA+LTASF VT
Sbjct: 138 VTGVVLAVLTASFGVT 153
>ref|NP_043053.1| cytochrome b6 [Zea mays] gi|48478799|ref|YP_024406.1| cytochrome b6
[Saccharum hybrid cultivar SP-80-3280]
gi|118614521|ref|YP_899437.1| cytochrome b6 [Sorghum
bicolor] gi|902251|emb|CAA60315.1| cytochrome B6 [Zea
mays] gi|48478701|gb|AAT44721.1| cytochrome b6
[Saccharum hybrid cultivar SP80-3280]
gi|118201155|gb|ABK79525.1| cytochrome b6 [Sorghum
bicolor]
Length = 234
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 28/41 (68%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Frame = +3
Query: 123 ANFGQLI*SIHRWST--MVLLMILLVFCVSLAARFKKPREL 239
ANFG LI S+HRWS MVL+MIL VF V L FKKPREL
Sbjct: 95 ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPREL 135
Score = 26.6 bits (57), Expect(2) = 2e-06
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 245 VTSVVLAILTASFVVT 292
VT VVLA+LTASF VT
Sbjct: 138 VTGVVLAVLTASFGVT 153
>ref|YP_008992839.1| cytochrome b6 (chloroplast) [Gossypium stocksii]
gi|326457418|gb|ADZ74678.1| cytochrome b6 [Gossypium
stocksii]
Length = 234
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 28/41 (68%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Frame = +3
Query: 123 ANFGQLI*SIHRWST--MVLLMILLVFCVSLAARFKKPREL 239
ANFG LI S+HRWS MVL+MIL VF V L FKKPREL
Sbjct: 95 ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPREL 135
Score = 26.6 bits (57), Expect(2) = 2e-06
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 245 VTSVVLAILTASFVVT 292
VT VVLA+LTASF VT
Sbjct: 138 VTGVVLAVLTASFGVT 153
>ref|YP_874682.1| cytochrome b6 [Hordeum vulgare subsp. vulgare]
gi|118201070|gb|ABK79441.1| cytochrome b6 [Hordeum
vulgare subsp. vulgare]
Length = 234
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 28/41 (68%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Frame = +3
Query: 123 ANFGQLI*SIHRWST--MVLLMILLVFCVSLAARFKKPREL 239
ANFG LI S+HRWS MVL+MIL VF V L FKKPREL
Sbjct: 95 ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPREL 135
Score = 26.6 bits (57), Expect(2) = 2e-06
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 245 VTSVVLAILTASFVVT 292
VT VVLA+LTASF VT
Sbjct: 138 VTGVVLAVLTASFGVT 153
>ref|YP_004841813.1| cytochrome b6 [Cucumis melo subsp. melo]
gi|344030521|gb|AEM76922.1| cytochrome b6 [Cucumis melo
subsp. melo]
Length = 233
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 28/41 (68%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Frame = +3
Query: 123 ANFGQLI*SIHRWST--MVLLMILLVFCVSLAARFKKPREL 239
ANFG LI S+HRWS MVL+MIL VF V L FKKPREL
Sbjct: 94 ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPREL 134
Score = 26.6 bits (57), Expect(2) = 2e-06
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 245 VTSVVLAILTASFVVT 292
VT VVLA+LTASF VT
Sbjct: 137 VTGVVLAVLTASFGVT 152
>ref|YP_008239121.1| cytochrome b6 (chloroplast) [Triticum monococcum]
gi|525782244|ref|YP_008239199.1| cytochrome b6
(chloroplast) [Secale cereale]
gi|525782309|ref|YP_008239263.1| cytochrome b6
(chloroplast) [Triticum urartu]
gi|533310134|ref|YP_008474328.1| cytochrome b6
(chloroplast) [Aegilops tauschii]
gi|533310230|ref|YP_008474420.1| cytochrome b6
(chloroplast) [Aegilops speltoides]
gi|568245025|ref|YP_008963933.1| cytochrome b6
(chloroplast) [Aegilops geniculata]
gi|568247023|ref|YP_008963856.1| cytochrome b6
(chloroplast) [Aegilops cylindrica]
gi|384406881|gb|AFH89538.1| cytochrome b6 (chloroplast)
[Aegilops tauschii] gi|394986521|gb|AFN42402.1|
cytochrome b6 (chloroplast) [Aegilops speltoides]
gi|521301219|gb|AGP51019.1| cytochrome b6 (chloroplast)
[Triticum monococcum] gi|521301298|gb|AGP51097.1|
cytochrome b6 (chloroplast) [Secale cereale]
gi|521301376|gb|AGP51174.1| cytochrome b6 (chloroplast)
[Triticum monococcum subsp. aegilopoides]
gi|521301440|gb|AGP51237.1| cytochrome b6 (chloroplast)
[Triticum urartu] gi|521301516|gb|AGP51312.1| cytochrome
b6 (chloroplast) [Triticum aestivum]
gi|554515583|gb|AGY92886.1| cytochrome b6 (chloroplast)
[Aegilops cylindrica] gi|554515661|gb|AGY92963.1|
cytochrome b6 (chloroplast) [Aegilops geniculata]
Length = 232
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 28/41 (68%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Frame = +3
Query: 123 ANFGQLI*SIHRWST--MVLLMILLVFCVSLAARFKKPREL 239
ANFG LI S+HRWS MVL+MIL VF V L FKKPREL
Sbjct: 93 ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPREL 133
Score = 26.6 bits (57), Expect(2) = 2e-06
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 245 VTSVVLAILTASFVVT 292
VT VVLA+LTASF VT
Sbjct: 136 VTGVVLAVLTASFGVT 151
>gb|AAZ04013.1| cytochrome b6 [Typha latifolia]
Length = 232
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 28/41 (68%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Frame = +3
Query: 123 ANFGQLI*SIHRWST--MVLLMILLVFCVSLAARFKKPREL 239
ANFG LI S+HRWS MVL+MIL VF V L FKKPREL
Sbjct: 93 ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPREL 133
Score = 26.6 bits (57), Expect(2) = 2e-06
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 245 VTSVVLAILTASFVVT 292
VT VVLA+LTASF VT
Sbjct: 136 VTGVVLAVLTASFGVT 151
>ref|XP_002457870.1| hypothetical protein SORBIDRAFT_03g017580 [Sorghum bicolor]
gi|12437|emb|CAA29000.1| unnamed protein product [Zea
mays] gi|241929845|gb|EES02990.1| hypothetical protein
SORBIDRAFT_03g017580 [Sorghum bicolor]
gi|413933808|gb|AFW68359.1| cytochrome b6 [Zea mays]
Length = 232
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 28/41 (68%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Frame = +3
Query: 123 ANFGQLI*SIHRWST--MVLLMILLVFCVSLAARFKKPREL 239
ANFG LI S+HRWS MVL+MIL VF V L FKKPREL
Sbjct: 93 ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPREL 133
Score = 26.6 bits (57), Expect(2) = 2e-06
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 245 VTSVVLAILTASFVVT 292
VT VVLA+LTASF VT
Sbjct: 136 VTGVVLAVLTASFGVT 151
>emb|CAA32267.1| petB [Hordeum vulgare subsp. vulgare] gi|521300981|gb|AGP50784.1|
cytochrome b6 (chloroplast) [Hordeum vulgare subsp.
vulgare] gi|521301058|gb|AGP50860.1| cytochrome b6
(chloroplast) [Hordeum vulgare subsp. spontaneum]
gi|521301138|gb|AGP50939.1| cytochrome b6 (chloroplast)
[Hordeum vulgare subsp. spontaneum]
Length = 232
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 28/41 (68%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Frame = +3
Query: 123 ANFGQLI*SIHRWST--MVLLMILLVFCVSLAARFKKPREL 239
ANFG LI S+HRWS MVL+MIL VF V L FKKPREL
Sbjct: 93 ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPREL 133
Score = 26.6 bits (57), Expect(2) = 2e-06
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 245 VTSVVLAILTASFVVT 292
VT VVLA+LTASF VT
Sbjct: 136 VTGVVLAVLTASFGVT 151
>ref|YP_008757470.1| cytochrome b6 (chloroplast) [Oryza rufipogon]
gi|343210|gb|AAA85375.1| apocytochrome b6 (alt.) [Oryza
sativa] gi|552954508|gb|AGY48976.1| cytochrome b6
(chloroplast) [Oryza rufipogon]
gi|555946018|gb|AGZ19244.1| cytochrome b6 (chloroplast)
[Oryza rufipogon] gi|226762|prf||1604469A cytochrome b6
Length = 232
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 28/41 (68%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Frame = +3
Query: 123 ANFGQLI*SIHRWST--MVLLMILLVFCVSLAARFKKPREL 239
ANFG LI S+HRWS MVL+MIL VF V L FKKPREL
Sbjct: 93 ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPREL 133
Score = 26.6 bits (57), Expect(2) = 2e-06
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 245 VTSVVLAILTASFVVT 292
VT VVLA+LTASF VT
Sbjct: 136 VTGVVLAVLTASFGVT 151
>ref|YP_003097604.1| cytochrome b6 [Dendrocalamus latiflorus]
gi|255099162|gb|ACT99948.1| cytochrome b6 [Dendrocalamus
latiflorus]
Length = 232
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 28/41 (68%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Frame = +3
Query: 123 ANFGQLI*SIHRWST--MVLLMILLVFCVSLAARFKKPREL 239
ANFG LI S+HRWS MVL+MIL VF V L FKKPREL
Sbjct: 93 ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPREL 133
Score = 26.6 bits (57), Expect(2) = 2e-06
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 245 VTSVVLAILTASFVVT 292
VT VVLA+LTASF VT
Sbjct: 136 VTGVVLAVLTASFGVT 151
>ref|YP_002000515.1| cytochrome b6 [Brachypodium distachyon] gi|193075584|gb|ACF08667.1|
cytochrome b6 (chloroplast) [Brachypodium distachyon]
Length = 232
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 28/41 (68%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Frame = +3
Query: 123 ANFGQLI*SIHRWST--MVLLMILLVFCVSLAARFKKPREL 239
ANFG LI S+HRWS MVL+MIL VF V L FKKPREL
Sbjct: 93 ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPREL 133
Score = 26.6 bits (57), Expect(2) = 2e-06
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 245 VTSVVLAILTASFVVT 292
VT VVLA+LTASF VT
Sbjct: 136 VTGVVLAVLTASFGVT 151
>gb|ABU85327.1| cytochrome b6 [Elaeis oleifera]
Length = 232
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 28/41 (68%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Frame = +3
Query: 123 ANFGQLI*SIHRWST--MVLLMILLVFCVSLAARFKKPREL 239
ANFG LI S+HRWS MVL+MIL VF V L FKKPREL
Sbjct: 93 ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPREL 133
Score = 26.6 bits (57), Expect(2) = 2e-06
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 245 VTSVVLAILTASFVVT 292
VT VVLA+LTASF VT
Sbjct: 136 VTGVVLAVLTASFGVT 151
>gb|ABI97446.1| cytochrome b6 [Cucumis sativus]
Length = 231
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 28/41 (68%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Frame = +3
Query: 123 ANFGQLI*SIHRWST--MVLLMILLVFCVSLAARFKKPREL 239
ANFG LI S+HRWS MVL+MIL VF V L FKKPREL
Sbjct: 92 ANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPREL 132
Score = 26.6 bits (57), Expect(2) = 2e-06
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 245 VTSVVLAILTASFVVT 292
VT VVLA+LTASF VT
Sbjct: 135 VTGVVLAVLTASFGVT 150