BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00043785
         (462 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_018038557.1| ATP-dependent Clp protease proteolytic subun...    62   3e-10
ref|XP_002990473.1| hypothetical protein SELMODRAFT_131898 [Sela...    57   9e-09
gb|AFK44268.1| unknown [Lotus japonicus]                               59   9e-09
ref|WP_010406850.1| ATP-dependent Clp protease proteolytic subun...    60   9e-09
ref|XP_002983780.1| hypothetical protein SELMODRAFT_48156 [Selag...    57   9e-09
ref|XP_006590798.1| PREDICTED: ATP-dependent Clp protease proteo...    56   3e-08
gb|ACU24172.1| unknown [Glycine max]                                   56   3e-08
ref|WP_009833709.1| ATP-dependent Clp protease proteolytic subun...    56   6e-08
gb|ETX09754.1| ATP-dependent Clp protease proteolytic subunit [M...    55   1e-07
ref|WP_022735033.1| ATP-dependent Clp protease proteolytic subun...    62   1e-07
ref|NP_001053358.1| Os04g0525600 [Oryza sativa Japonica Group] g...    54   1e-07
emb|CAE05641.2| OSJNBa0038O10.7 [Oryza sativa Japonica Group] gi...    54   1e-07
gb|ABK23566.1| unknown [Picea sitchensis]                              57   1e-07
ref|XP_002277069.1| PREDICTED: ATP-dependent Clp protease proteo...    55   1e-07
emb|CAN64666.1| hypothetical protein VITISV_024612 [Vitis vinifera]    55   1e-07
gb|EAZ31393.1| hypothetical protein OsJ_15521 [Oryza sativa Japo...    54   1e-07
emb|CBI27144.3| unnamed protein product [Vitis vinifera]               55   1e-07
ref|YP_001219057.1| ATP-dependent Clp protease proteolytic subun...    61   1e-07
ref|XP_003581445.1| PREDICTED: ATP-dependent Clp protease proteo...    55   2e-07
ref|NP_001147355.1| ATP-dependent Clp protease proteolytic subun...    52   2e-07

>ref|WP_018038557.1| ATP-dependent Clp protease proteolytic subunit [alpha
           proteobacterium SCGC AB-629-G21]
          Length = 203

 Score = 62.0 bits (149), Expect(2) = 3e-10
 Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
 Frame = -3

Query: 406 LNSEFIIYNTMQHLSNLMSTLRIGQVYSIGALLLVVG-KGKRHTLPQFIITIQPPYKSIS 230
           + S F IY+TMQ++   +STL IGQ  S+G+ LL  G KGKR +LP   I +  P     
Sbjct: 80  VTSGFGIYDTMQYIKPPVSTLCIGQASSMGSFLLAAGEKGKRFSLPNSRIMVHQPSAGYQ 139

Query: 229 DDVFDVFALTKKLMTSHNLLVKLFSLHTKKS 137
               D+    K+++   + L K++S HTKKS
Sbjct: 140 GQATDIEIHAKEILALKDRLNKIYSKHTKKS 170



 Score = 28.1 bits (61), Expect(2) = 3e-10
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
 Frame = -1

Query: 162 YSHYTQRNRSKL*LYQDFD----PREAKELGLLDEIVLHR 55
           YS +T+++ S++    + D    P EAK+ GL+DE+V  R
Sbjct: 163 YSKHTKKSESEIKKALERDNFMTPTEAKDFGLIDEVVEKR 202


>ref|XP_002990473.1| hypothetical protein SELMODRAFT_131898 [Selaginella moellendorffii]
           gi|300141641|gb|EFJ08350.1| hypothetical protein
           SELMODRAFT_131898 [Selaginella moellendorffii]
          Length = 253

 Score = 57.0 bits (136), Expect(2) = 9e-09
 Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
 Frame = -3

Query: 388 IYNTMQHLSNLMSTLRIGQVYSIGALLLVVGK-GKRHTLPQFIITIQPPYKSISDDVFDV 212
           IY+TMQ++ + +STL +GQ  S+G+LLL  G+ G+R +LP   + +  P    S    D+
Sbjct: 103 IYDTMQYIRSPVSTLCVGQAASMGSLLLAAGEPGQRRSLPNARVMVHQPSGGASGQASDI 162

Query: 211 FALTKKLMTSHNLLVKLFSLHTKKSIK 131
               ++++   + L KL++ HT  SI+
Sbjct: 163 AIQAREILDMRSRLNKLYAKHTGSSIE 189



 Score = 28.1 bits (61), Expect(2) = 9e-09
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -1

Query: 105 PREAKELGLLDEIVLHR 55
           P EAKE GL+DE+++ R
Sbjct: 203 PEEAKEFGLIDEVIVQR 219


>gb|AFK44268.1| unknown [Lotus japonicus]
          Length = 243

 Score = 58.5 bits (140), Expect(2) = 9e-09
 Identities = 33/87 (37%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
 Frame = -3

Query: 388 IYNTMQHLSNLMSTLRIGQVYSIGALLLVVG-KGKRHTLPQFIITIQPPYKSISDDVFDV 212
           IY+TMQ++ + ++T+ +GQ  S+G+LLL  G KG+R +LP   I I  P    S    D+
Sbjct: 108 IYDTMQYIRSPINTICLGQAASMGSLLLAAGAKGQRRSLPNASIMIHQPSGGYSGQAKDI 167

Query: 211 FALTKKLMTSHNLLVKLFSLHTKKSIK 131
              TK+++   +LL  L++ HT +SI+
Sbjct: 168 AIHTKQIVRVWDLLNDLYAKHTGQSIE 194



 Score = 26.6 bits (57), Expect(2) = 9e-09
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -1

Query: 105 PREAKELGLLDEIVLHR*M 49
           P EAKE GL+DE++  R M
Sbjct: 208 PEEAKEFGLIDEVIDQRPM 226


>ref|WP_010406850.1| ATP-dependent Clp protease proteolytic subunit [Wolbachia
           endosymbiont of Nasonia vitripennis]
          Length = 213

 Score = 60.5 bits (145), Expect(2) = 9e-09
 Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
 Frame = -3

Query: 388 IYNTMQHLSNLMSTLRIGQVYSIGALLLVVG-KGKRHTLPQFIITIQPPYKSISDDVFDV 212
           IY+TMQ++S  +STL IGQ  S+G+LLL  G KGKRH+LP   I I  P         D+
Sbjct: 82  IYDTMQYISPNVSTLCIGQAASMGSLLLAAGAKGKRHSLPHSRIMIHQPSGGYQGQATDI 141

Query: 211 FALTKKLMTSHNLLVKLFSLHTKKSIK 131
               K+++     L +++  HT  S+K
Sbjct: 142 EIHAKEILRIKKKLNQIYEKHTGHSLK 168



 Score = 24.6 bits (52), Expect(2) = 9e-09
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -1

Query: 108 DPREAKELGLLDEIVLHR 55
           DP EA +LGL+D+++  R
Sbjct: 181 DPIEAMKLGLIDKVIAER 198


>ref|XP_002983780.1| hypothetical protein SELMODRAFT_48156 [Selaginella moellendorffii]
           gi|300148617|gb|EFJ15276.1| hypothetical protein
           SELMODRAFT_48156 [Selaginella moellendorffii]
          Length = 206

 Score = 57.0 bits (136), Expect(2) = 9e-09
 Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
 Frame = -3

Query: 388 IYNTMQHLSNLMSTLRIGQVYSIGALLLVVGK-GKRHTLPQFIITIQPPYKSISDDVFDV 212
           IY+TMQ++ + +STL +GQ  S+G+LLL  G+ G+R +LP   + +  P    S    D+
Sbjct: 80  IYDTMQYIRSPVSTLCVGQAASMGSLLLAAGEPGQRRSLPNARVMVHQPSGGASGQASDI 139

Query: 211 FALTKKLMTSHNLLVKLFSLHTKKSIK 131
               ++++   + L KL++ HT  SI+
Sbjct: 140 AIQAREILDMRSRLNKLYAKHTGSSIE 166



 Score = 28.1 bits (61), Expect(2) = 9e-09
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -1

Query: 105 PREAKELGLLDEIVLHR 55
           P EAKE GL+DE+++ R
Sbjct: 180 PEEAKEFGLIDEVIVQR 196


>ref|XP_006590798.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
           mitochondrial-like [Glycine max]
          Length = 238

 Score = 56.2 bits (134), Expect(2) = 3e-08
 Identities = 31/89 (34%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
 Frame = -3

Query: 388 IYNTMQHLSNLMSTLRIGQVYSIGALLLVVG-KGKRHTLPQFIITIQPPYKSISDDVFDV 212
           IY+TMQ++ + ++T+ +GQ  S+G+LLL  G KG+R +LP   I I  P    S    D+
Sbjct: 103 IYDTMQYIRSPVNTICMGQAASMGSLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDI 162

Query: 211 FALTKKLMTSHNLLVKLFSLHTKKSIKTM 125
              TK ++   + L +L++ HT +S++ +
Sbjct: 163 AIHTKHIVRVWDSLNELYAKHTGQSVEVI 191



 Score = 27.3 bits (59), Expect(2) = 3e-08
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -1

Query: 105 PREAKELGLLDEIVLHR*M 49
           P+EAKE GL+DE++  R M
Sbjct: 203 PKEAKEFGLIDEVIDQRPM 221


>gb|ACU24172.1| unknown [Glycine max]
          Length = 238

 Score = 56.2 bits (134), Expect(2) = 3e-08
 Identities = 31/89 (34%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
 Frame = -3

Query: 388 IYNTMQHLSNLMSTLRIGQVYSIGALLLVVG-KGKRHTLPQFIITIQPPYKSISDDVFDV 212
           IY+TMQ++ + ++T+ +GQ  S+G+LLL  G KG+R +LP   I I  P    S    D+
Sbjct: 103 IYDTMQYIRSPVNTICMGQAASMGSLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDI 162

Query: 211 FALTKKLMTSHNLLVKLFSLHTKKSIKTM 125
              TK ++   + L +L++ HT +S++ +
Sbjct: 163 AIHTKHIVRVWDSLNELYAKHTGQSVEVI 191



 Score = 27.3 bits (59), Expect(2) = 3e-08
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -1

Query: 105 PREAKELGLLDEIVLHR*M 49
           P+EAKE GL+DE++  R M
Sbjct: 203 PKEAKEFGLIDEVIDQRPM 221


>ref|WP_009833709.1| ATP-dependent Clp protease proteolytic subunit [Marinomonas sp.
           MED121] gi|86163465|gb|EAQ64740.1| putative
           ATP-dependent Clp protease, proteolytic subunit
           [Marinomonas sp. MED121]
          Length = 210

 Score = 55.8 bits (133), Expect(2) = 6e-08
 Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
 Frame = -3

Query: 409 SLNSEFIIYNTMQHLSNLMSTLRIGQVYSIGALLLVVG-KGKRHTLPQFIITIQPPYKSI 233
           S+ +   IY+TMQ +   +ST+ IGQ  S+GALLL  G  GKR+ LP   + I  P    
Sbjct: 85  SVTAGMSIYDTMQFIKPDVSTMCIGQAASMGALLLTAGAAGKRYCLPNSRVMIHQPLGGY 144

Query: 232 SDDVFDVFALTKKLMTSHNLLVKLFSLHTKKSIK 131
                D+   T+++++  + L ++ S HT K I+
Sbjct: 145 QGQASDIEIHTREILSIKHRLNEIISFHTGKPIE 178



 Score = 26.6 bits (57), Expect(2) = 6e-08
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -1

Query: 108 DPREAKELGLLDEIVLHR 55
           DP  AKE GL+D+I+L R
Sbjct: 191 DPTAAKEYGLIDDILLKR 208


>gb|ETX09754.1| ATP-dependent Clp protease proteolytic subunit [Marinomonas
           ushuaiensis DSM 15871]
          Length = 210

 Score = 55.5 bits (132), Expect(2) = 1e-07
 Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
 Frame = -3

Query: 409 SLNSEFIIYNTMQHLSNLMSTLRIGQVYSIGALLLVVG-KGKRHTLPQFIITIQPPYKSI 233
           S+ +   IY+TMQ +   +ST+ IGQ  S+GALLL  G  GKR+ LP   + I  P    
Sbjct: 85  SVTAGMSIYDTMQFIKPDVSTMCIGQAASMGALLLTAGAAGKRYCLPNSRVMIHQPLGGY 144

Query: 232 SDDVFDVFALTKKLMTSHNLLVKLFSLHTKKSIKTMII 119
                D+   T+++++  + L ++ S HT K I+ + +
Sbjct: 145 QGQASDIEIHTREILSIKHKLNEIISSHTGKPIEQVAL 182



 Score = 26.2 bits (56), Expect(2) = 1e-07
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -1

Query: 108 DPREAKELGLLDEIVLHR 55
           +P  AKE GL+DEI+L R
Sbjct: 191 NPETAKEYGLIDEILLKR 208


>ref|WP_022735033.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
           Pelagibacter ubique]
          Length = 203

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
 Frame = -3

Query: 388 IYNTMQHLSNLMSTLRIGQVYSIGALLLVVG-KGKRHTLPQFIITIQPPYKSISDDVFDV 212
           IY+TMQ++++ +STL IGQ  S+G+ LL  G KGKR++LP   I +  P         D+
Sbjct: 86  IYDTMQYINSPVSTLCIGQASSMGSFLLAAGEKGKRYSLPNSRIMVHQPSAGFQGQATDI 145

Query: 211 FALTKKLMTSHNLLVKLFSLHTKKSI 134
               K++++    L K++S HT KS+
Sbjct: 146 QIHAKEILSLKERLNKIYSKHTGKSV 171


>ref|NP_001053358.1| Os04g0525600 [Oryza sativa Japonica Group]
           gi|113564929|dbj|BAF15272.1| Os04g0525600 [Oryza sativa
           Japonica Group] gi|215768496|dbj|BAH00725.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 309

 Score = 53.5 bits (127), Expect(2) = 1e-07
 Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
 Frame = -3

Query: 388 IYNTMQHLSNLMSTLRIGQVYSIGALLLVVG-KGKRHTLPQFIITIQPPYKSISDDVFDV 212
           IY+TMQ++ + ++TL IGQ  S+ +LLL  G +G+R  LP   + I  P    S    D+
Sbjct: 160 IYDTMQYIRSPVTTLCIGQAASMASLLLAAGARGERRALPNARVMIHQPSGGASGQASDI 219

Query: 211 FALTKKLMTSHNLLVKLFSLHTKKSI 134
               K+++   + L K+++ HT ++I
Sbjct: 220 AIHAKEILKVRDRLNKIYAKHTSQAI 245



 Score = 27.7 bits (60), Expect(2) = 1e-07
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 108 DPREAKELGLLDEIVLHR 55
           DP EA + GL+DE++ HR
Sbjct: 259 DPEEAHDWGLIDEVIEHR 276


>emb|CAE05641.2| OSJNBa0038O10.7 [Oryza sativa Japonica Group]
           gi|116310954|emb|CAH67891.1|
           OSIGBa0153E02-OSIGBa0093I20.20 [Oryza sativa Indica
           Group] gi|125549084|gb|EAY94906.1| hypothetical protein
           OsI_16707 [Oryza sativa Indica Group]
          Length = 259

 Score = 53.5 bits (127), Expect(2) = 1e-07
 Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
 Frame = -3

Query: 388 IYNTMQHLSNLMSTLRIGQVYSIGALLLVVG-KGKRHTLPQFIITIQPPYKSISDDVFDV 212
           IY+TMQ++ + ++TL IGQ  S+ +LLL  G +G+R  LP   + I  P    S    D+
Sbjct: 110 IYDTMQYIRSPVTTLCIGQAASMASLLLAAGARGERRALPNARVMIHQPSGGASGQASDI 169

Query: 211 FALTKKLMTSHNLLVKLFSLHTKKSI 134
               K+++   + L K+++ HT ++I
Sbjct: 170 AIHAKEILKVRDRLNKIYAKHTSQAI 195



 Score = 27.7 bits (60), Expect(2) = 1e-07
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 108 DPREAKELGLLDEIVLHR 55
           DP EA + GL+DE++ HR
Sbjct: 209 DPEEAHDWGLIDEVIEHR 226


>gb|ABK23566.1| unknown [Picea sitchensis]
          Length = 243

 Score = 57.0 bits (136), Expect(2) = 1e-07
 Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
 Frame = -3

Query: 388 IYNTMQHLSNLMSTLRIGQVYSIGALLLVVG-KGKRHTLPQFIITIQPPYKSISDDVFDV 212
           IY+TMQ++ + +ST  +GQ  S+G+LLL  G KG+R +LP   I I  P    S    D+
Sbjct: 107 IYDTMQYIRSPVSTFCMGQAASMGSLLLAAGAKGERRSLPNARIMIHQPSGGASGQASDI 166

Query: 211 FALTKKLMTSHNLLVKLFSLHTKKSI 134
               K+++ + + L  L++ HT +SI
Sbjct: 167 AIQAKEILLTRDRLNSLYAKHTGQSI 192



 Score = 24.3 bits (51), Expect(2) = 1e-07
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1

Query: 105 PREAKELGLLDEIVLHR*M 49
           P EAKE GL+D ++  R M
Sbjct: 207 PEEAKEFGLVDTVIEQRPM 225


>ref|XP_002277069.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
           mitochondrial-like [Vitis vinifera]
          Length = 241

 Score = 55.5 bits (132), Expect(2) = 1e-07
 Identities = 35/105 (33%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
 Frame = -3

Query: 436 KHVHWLL*S---SLNSEFIIYNTMQHLSNLMSTLRIGQVYSIGALLLVVG-KGKRHTLPQ 269
           K +H  L S   ++++   IY+TMQ++ + ++T+ +GQ  S+G+LLL  G KG+R  LP 
Sbjct: 85  KPIHMYLNSPGGAVSAGLAIYDTMQYIRSPVNTICLGQAASMGSLLLAAGAKGERRALPN 144

Query: 268 FIITIQPPYKSISDDVFDVFALTKKLMTSHNLLVKLFSLHTKKSI 134
             I I  P    S    D+   TK+++   + L  L++ HT +S+
Sbjct: 145 ATIMIHQPSGGYSGQAKDMTIHTKQIIRVWDSLNALYAKHTGQSL 189



 Score = 25.8 bits (55), Expect(2) = 1e-07
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 105 PREAKELGLLDEIVLHR*M 49
           P EAKE G++DE++  R M
Sbjct: 204 PEEAKEFGIIDEVIDQRPM 222


>emb|CAN64666.1| hypothetical protein VITISV_024612 [Vitis vinifera]
          Length = 221

 Score = 55.5 bits (132), Expect(2) = 1e-07
 Identities = 35/105 (33%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
 Frame = -3

Query: 436 KHVHWLL*S---SLNSEFIIYNTMQHLSNLMSTLRIGQVYSIGALLLVVG-KGKRHTLPQ 269
           K +H  L S   ++++   IY+TMQ++ + ++T+ +GQ  S+G+LLL  G KG+R  LP 
Sbjct: 65  KPIHMYLNSPGGAVSAGLAIYDTMQYIRSPVNTICLGQAASMGSLLLAAGAKGERRALPN 124

Query: 268 FIITIQPPYKSISDDVFDVFALTKKLMTSHNLLVKLFSLHTKKSI 134
             I I  P    S    D+   TK+++   + L  L++ HT +S+
Sbjct: 125 ATIMIHQPSGGYSGQAKDMTIHTKQIIRVWDSLNALYAKHTGQSL 169



 Score = 25.8 bits (55), Expect(2) = 1e-07
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 105 PREAKELGLLDEIVLHR*M 49
           P EAKE G++DE++  R M
Sbjct: 184 PEEAKEFGIIDEVIDQRPM 202


>gb|EAZ31393.1| hypothetical protein OsJ_15521 [Oryza sativa Japonica Group]
          Length = 221

 Score = 53.5 bits (127), Expect(2) = 1e-07
 Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
 Frame = -3

Query: 388 IYNTMQHLSNLMSTLRIGQVYSIGALLLVVG-KGKRHTLPQFIITIQPPYKSISDDVFDV 212
           IY+TMQ++ + ++TL IGQ  S+ +LLL  G +G+R  LP   + I  P    S    D+
Sbjct: 72  IYDTMQYIRSPVTTLCIGQAASMASLLLAAGARGERRALPNARVMIHQPSGGASGQASDI 131

Query: 211 FALTKKLMTSHNLLVKLFSLHTKKSI 134
               K+++   + L K+++ HT ++I
Sbjct: 132 AIHAKEILKVRDRLNKIYAKHTSQAI 157



 Score = 27.7 bits (60), Expect(2) = 1e-07
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 108 DPREAKELGLLDEIVLHR 55
           DP EA + GL+DE++ HR
Sbjct: 171 DPEEAHDWGLIDEVIEHR 188


>emb|CBI27144.3| unnamed protein product [Vitis vinifera]
          Length = 209

 Score = 55.5 bits (132), Expect(2) = 1e-07
 Identities = 35/105 (33%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
 Frame = -3

Query: 436 KHVHWLL*S---SLNSEFIIYNTMQHLSNLMSTLRIGQVYSIGALLLVVG-KGKRHTLPQ 269
           K +H  L S   ++++   IY+TMQ++ + ++T+ +GQ  S+G+LLL  G KG+R  LP 
Sbjct: 53  KPIHMYLNSPGGAVSAGLAIYDTMQYIRSPVNTICLGQAASMGSLLLAAGAKGERRALPN 112

Query: 268 FIITIQPPYKSISDDVFDVFALTKKLMTSHNLLVKLFSLHTKKSI 134
             I I  P    S    D+   TK+++   + L  L++ HT +S+
Sbjct: 113 ATIMIHQPSGGYSGQAKDMTIHTKQIIRVWDSLNALYAKHTGQSL 157



 Score = 25.8 bits (55), Expect(2) = 1e-07
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 105 PREAKELGLLDEIVLHR*M 49
           P EAKE G++DE++  R M
Sbjct: 172 PEEAKEFGIIDEVIDQRPM 190


>ref|YP_001219057.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
           Vesicomyosocius okutanii HA]
           gi|500416713|ref|WP_011929603.1| ATP-dependent Clp
           protease proteolytic subunit [Calyptogena okutanii
           thioautotrophic gill symbiont]
           gi|166214721|sp|A5CXJ8.1|CLPP_VESOH RecName:
           Full=ATP-dependent Clp protease proteolytic subunit;
           AltName: Full=Endopeptidase Clp
           gi|146326190|dbj|BAF61333.1| ATP-dependent Clp protease
           proteolytic subunit ClpP [Candidatus Vesicomyosocius
           okutanii HA]
          Length = 198

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
 Frame = -3

Query: 409 SLNSEFIIYNTMQHLSNLMSTLRIGQVYSIGALLLVVG-KGKRHTLPQFIITIQPPYKSI 233
           S+++   IY+TMQ + + +STL IGQ  S+GALLL  G KGKR  LP     I  P    
Sbjct: 75  SVSAGLAIYDTMQFIKSDISTLCIGQAASMGALLLTAGTKGKRFALPNVRCMIHQPLGGF 134

Query: 232 SDDVFDVFALTKKLMTSHNLLVKLFSLHTKKSIKTM 125
           S    DV    ++++     L ++F LHT + IKT+
Sbjct: 135 SGQASDVDIHAQEILKVRANLNQIFKLHTGQVIKTI 170


>ref|XP_003581445.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
           mitochondrial-like [Brachypodium distachyon]
          Length = 300

 Score = 55.1 bits (131), Expect(2) = 2e-07
 Identities = 30/89 (33%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
 Frame = -3

Query: 388 IYNTMQHLSNLMSTLRIGQVYSIGALLLVVG-KGKRHTLPQFIITIQPPYKSISDDVFDV 212
           IY+TMQ++ + ++TL IGQ  S+G+LLL  G  G+R  LP   + I  P    S    D+
Sbjct: 151 IYDTMQYIRSPVTTLCIGQAASMGSLLLAAGAPGERRALPNARVMIHQPSGGASGQASDI 210

Query: 211 FALTKKLMTSHNLLVKLFSLHTKKSIKTM 125
               K+++   + L K+++ HT ++I+++
Sbjct: 211 AIHAKEILKVRDRLNKIYAKHTGQAIESI 239



 Score = 25.8 bits (55), Expect(2) = 2e-07
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 108 DPREAKELGLLDEIVLHR 55
           DP EA   GL+DE++ HR
Sbjct: 250 DPVEAHSWGLIDEVIEHR 267


>ref|NP_001147355.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
           gi|194700894|gb|ACF84531.1| unknown [Zea mays]
           gi|195610476|gb|ACG27068.1| ATP-dependent Clp protease
           proteolytic subunit [Zea mays]
           gi|413918966|gb|AFW58898.1| ATP-dependent Clp protease
           proteolytic subunit isoform 1 [Zea mays]
           gi|413918967|gb|AFW58899.1| ATP-dependent Clp protease
           proteolytic subunit isoform 2 [Zea mays]
          Length = 260

 Score = 52.0 bits (123), Expect(2) = 2e-07
 Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
 Frame = -3

Query: 388 IYNTMQHLSNLMSTLRIGQVYSIGALLLVVG-KGKRHTLPQFIITIQPPYKSISDDVFDV 212
           IY+TMQ++ + ++TL IGQ  S+ +LLL  G  G+R  LP   + I  P    S    D+
Sbjct: 111 IYDTMQYIRSPVTTLCIGQAASMASLLLAAGASGERRALPNARVMIHQPSGGASGQASDI 170

Query: 211 FALTKKLMTSHNLLVKLFSLHTKKSI 134
               K+++   + L K+++ HT ++I
Sbjct: 171 AIHAKEILKVRDRLNKIYAKHTGQAI 196



 Score = 28.9 bits (63), Expect(2) = 2e-07
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -1

Query: 108 DPREAKELGLLDEIVLHR 55
           DP EA E GL+DE++ HR
Sbjct: 210 DPEEAHEWGLIDEVIEHR 227