BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00043737
         (402 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT08309.1| hypothetical protein F775_09081 [Aegilops tauschii]     67   2e-09
dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]     66   5e-09
ref|XP_002452372.1| hypothetical protein SORBIDRAFT_04g024590 [S...    66   5e-09
gb|AFW62799.1| putative pentatricopeptide repeat family protein ...    65   1e-08
ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08
ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group] g...    62   8e-08
gb|EAY73966.1| hypothetical protein OsI_01850 [Oryza sativa Indi...    62   8e-08
ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group] g...    62   1e-07
gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japo...    62   1e-07
ref|XP_004966592.1| PREDICTED: pentatricopeptide repeat-containi...    61   1e-07
ref|XP_004952954.1| PREDICTED: pentatricopeptide repeat-containi...    61   1e-07
gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japo...    60   2e-07
ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group] g...    60   3e-07
gb|EAY99379.1| hypothetical protein OsI_21347 [Oryza sativa Indi...    60   3e-07
ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containi...    59   5e-07
emb|CBI30601.3| unnamed protein product [Vitis vinifera]               59   5e-07
ref|XP_006357349.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
ref|XP_004237632.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]    59   9e-07
gb|EOY28177.1| Tetratricopeptide repeat-like superfamily protein...    58   1e-06

>gb|EMT08309.1| hypothetical protein F775_09081 [Aegilops tauschii]
          Length = 877

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 37/85 (43%), Positives = 53/85 (62%)
 Frame = +2

Query: 137 SISDLIALISSTHSIGGASKIHALLAKXXXXXXXXXXXXXXXXYSRCRSPESSRKLFEEF 316
           SIS L+A  +++ S+   + IHA L K                YS+CR P S+R++F+E 
Sbjct: 6   SISPLLARYAASQSLLLGAHIHAHLLKSGLLHAFRNHLLSF--YSKCRLPGSARRVFDET 63

Query: 317 PDQDHVSWSALISAFANNGLGRDAL 391
           PD  HVSWS+L++A++NNGL RDAL
Sbjct: 64  PDPCHVSWSSLVTAYSNNGLPRDAL 88


>dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 36/88 (40%), Positives = 52/88 (59%)
 Frame = +2

Query: 137 SISDLIALISSTHSIGGASKIHALLAKXXXXXXXXXXXXXXXXYSRCRSPESSRKLFEEF 316
           SIS L+   ++T S+   + IHA L K                YS+CR P S+R++F+E 
Sbjct: 6   SISPLLTRYAATQSLFLGAHIHAHLLKSGLLHAFRNHLLSF--YSKCRLPGSARRVFDET 63

Query: 317 PDQDHVSWSALISAFANNGLGRDALKTF 400
           PD  HVSWS+L++A++NN L R+AL  F
Sbjct: 64  PDPCHVSWSSLVTAYSNNALPREALAAF 91


>ref|XP_002452372.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
           gi|241932203|gb|EES05348.1| hypothetical protein
           SORBIDRAFT_04g024590 [Sorghum bicolor]
          Length = 691

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 33/89 (37%), Positives = 51/89 (57%)
 Frame = +2

Query: 134 GSISDLIALISSTHSIGGASKIHALLAKXXXXXXXXXXXXXXXXYSRCRSPESSRKLFEE 313
           G+I   +A   ++ S+   + +H+ L K                YSRCR P ++R +F+E
Sbjct: 5   GTIGSALARFGASRSLLAGAHLHSHLLKSGLLASYSNHLLSF--YSRCRLPSAARAVFDE 62

Query: 314 FPDQDHVSWSALISAFANNGLGRDALKTF 400
            PD  HVSWS+L++A++NNG+ RDAL  F
Sbjct: 63  IPDPCHVSWSSLVTAYSNNGMPRDALWAF 91


>gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 35/94 (37%), Positives = 52/94 (55%)
 Frame = +2

Query: 119 TPTVTGSISDLIALISSTHSIGGASKIHALLAKXXXXXXXXXXXXXXXXYSRCRSPESSR 298
           TP   GS    +A   ++ S+   + +H+ L K                YSRCR P ++R
Sbjct: 3   TPETIGSA---LARFGTSRSLFAGAHLHSHLLKSGLLAGFSNHLLTL--YSRCRLPSAAR 57

Query: 299 KLFEEFPDQDHVSWSALISAFANNGLGRDALKTF 400
            +F+E PD  HVSWS+L++A++NNG+ RDAL  F
Sbjct: 58  AVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAF 91


>ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 34/88 (38%), Positives = 51/88 (57%)
 Frame = +2

Query: 137 SISDLIALISSTHSIGGASKIHALLAKXXXXXXXXXXXXXXXXYSRCRSPESSRKLFEEF 316
           +I  L+   ++T S+   + IHA L K                YS+CR P S+R++F+E 
Sbjct: 6   TIGPLLTRYAATQSLLQGAHIHAHLLKSGLFAVFRNHLLSF--YSKCRLPGSARRVFDEI 63

Query: 317 PDQDHVSWSALISAFANNGLGRDALKTF 400
           PD  HVSWS+L++A++NN + RDAL  F
Sbjct: 64  PDPCHVSWSSLVTAYSNNAMPRDALGAF 91


>ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
           gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|215768699|dbj|BAH00928.1| unnamed protein
           product [Oryza sativa Japonica Group]
           gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa
           Japonica Group]
          Length = 877

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 31/89 (34%), Positives = 51/89 (57%)
 Frame = +2

Query: 134 GSISDLIALISSTHSIGGASKIHALLAKXXXXXXXXXXXXXXXXYSRCRSPESSRKLFEE 313
           G+IS  +   ++  ++   + +HA L K                YS+CR P  +R++F+E
Sbjct: 5   GTISQQLTRYAAAQALLPGAHLHASLLKSGSLASFRNHLISF--YSKCRRPCCARRVFDE 62

Query: 314 FPDQDHVSWSALISAFANNGLGRDALKTF 400
            PD  HVSWS+L++A++NNGL R A++ F
Sbjct: 63  IPDPCHVSWSSLVTAYSNNGLPRSAIQAF 91


>gb|EAY73966.1| hypothetical protein OsI_01850 [Oryza sativa Indica Group]
          Length = 641

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 31/89 (34%), Positives = 51/89 (57%)
 Frame = +2

Query: 134 GSISDLIALISSTHSIGGASKIHALLAKXXXXXXXXXXXXXXXXYSRCRSPESSRKLFEE 313
           G+IS  +   ++  ++   + +HA L K                YS+CR P  +R++F+E
Sbjct: 5   GTISQQLTRYAAAQALLPGAHLHASLLKSGLLASFRNHLISF--YSKCRRPCCARRVFDE 62

Query: 314 FPDQDHVSWSALISAFANNGLGRDALKTF 400
            PD  HVSWS+L++A++NNGL R A++ F
Sbjct: 63  IPDPCHVSWSSLVTAYSNNGLPRSAIQAF 91


>ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
           gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|47848643|dbj|BAD22491.1| pentatricopeptide
           (PPR) repeat-containing protein-like [Oryza sativa
           Japonica Group] gi|113630915|dbj|BAF24596.1|
           Os09g0251500 [Oryza sativa Japonica Group]
           gi|215767397|dbj|BAG99625.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 877

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 31/89 (34%), Positives = 51/89 (57%)
 Frame = +2

Query: 134 GSISDLIALISSTHSIGGASKIHALLAKXXXXXXXXXXXXXXXXYSRCRSPESSRKLFEE 313
           G+IS  +   ++  ++   + +HA L K                YS+CR P  +R++F+E
Sbjct: 5   GTISQQLTRYAAAQALLPGAHLHANLLKSGFLASLRNHLISF--YSKCRRPCCARRVFDE 62

Query: 314 FPDQDHVSWSALISAFANNGLGRDALKTF 400
            PD  HVSWS+L++A++NNGL R A++ F
Sbjct: 63  IPDPCHVSWSSLVTAYSNNGLPRSAIQAF 91


>gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 31/89 (34%), Positives = 50/89 (56%)
 Frame = +2

Query: 134 GSISDLIALISSTHSIGGASKIHALLAKXXXXXXXXXXXXXXXXYSRCRSPESSRKLFEE 313
           G+IS  +   ++  ++   + +HA L K                YS+CR P  +R+ F+E
Sbjct: 5   GTISQQLTRYAAAQALLPGAHLHASLLKSGSLASFRNHLISF--YSKCRRPCCARRFFDE 62

Query: 314 FPDQDHVSWSALISAFANNGLGRDALKTF 400
            PD  HVSWS+L++A++NNGL R A++ F
Sbjct: 63  IPDPCHVSWSSLVTAYSNNGLPRSAIQAF 91


>ref|XP_004966592.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Setaria italica]
          Length = 737

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 8/138 (5%)
 Frame = +2

Query: 5   PVSSKPLRSSIPFSHKTLLHTAAAADL--------SPSHSPPAETSTPTVTGSISDLIAL 160
           P  S P  S     H  L   AA +DL        S   SP A  +   V  + + L+ L
Sbjct: 11  PPPSPPTPSHAADPHARLRAAAARSDLPGALTAFASMPSSPSAPAAARPVLRTFTALLKL 70

Query: 161 ISSTHSIGGASKIHALLAKXXXXXXXXXXXXXXXXYSRCRSPESSRKLFEEFPDQDHVSW 340
            ++   +     +HA LA                 Y++CR P  +R++F+  P +D V+W
Sbjct: 71  CAARADLATGRAVHAQLAARGLASESLAATALANMYAKCRRPADARRVFDRMPARDRVAW 130

Query: 341 SALISAFANNGLGRDALK 394
           +AL++ +A NGL   A++
Sbjct: 131 NALVAGYARNGLHEAAME 148


>ref|XP_004952954.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Setaria italica]
          Length = 883

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/88 (35%), Positives = 50/88 (56%)
 Frame = +2

Query: 137 SISDLIALISSTHSIGGASKIHALLAKXXXXXXXXXXXXXXXXYSRCRSPESSRKLFEEF 316
           +I  L+A   ++ S+   + +H+ L K                YSRCR P ++R +F+E 
Sbjct: 6   TIGPLLARYGASRSLLAGAHLHSHLLKSGLLAACRNHLISF--YSRCRLPRAARAVFDEI 63

Query: 317 PDQDHVSWSALISAFANNGLGRDALKTF 400
           PD  HVSWS+L++A++NN + R+AL  F
Sbjct: 64  PDPCHVSWSSLVTAYSNNSMPREALGAF 91


>gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
 Frame = +2

Query: 17  KPLRSSIPFSHKTLLHTAAAADLSPSHSPPAETST---PTVTGSISDLIALISSTHSIGG 187
           KP   +    H  L  +AA +DL  + +     S+   P V  + + L+ L ++   +  
Sbjct: 18  KPTALAADDHHARLRASAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLAT 77

Query: 188 ASKIHALLAKXXXXXXXXXXXXXXXXYSRCRSPESSRKLFEEFPDQDHVSWSALISAFAN 367
              +HA LA                 Y++CR P  +R++F+  P +D V+W+AL++ +A 
Sbjct: 78  GRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYAR 137

Query: 368 NGLGRDALK 394
           NGL R A++
Sbjct: 138 NGLARMAME 146


>ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
           gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza
           sativa Japonica Group] gi|215737111|dbj|BAG96040.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 3/129 (2%)
 Frame = +2

Query: 17  KPLRSSIPFSHKTLLHTAAAADLSPSHSPPAETST---PTVTGSISDLIALISSTHSIGG 187
           KP   +    H  L   AA +DL  + +     S+   P V  + + L+ L ++   +  
Sbjct: 18  KPTALAADDHHARLRAAAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLAT 77

Query: 188 ASKIHALLAKXXXXXXXXXXXXXXXXYSRCRSPESSRKLFEEFPDQDHVSWSALISAFAN 367
              +HA LA                 Y++CR P  +R++F+  P +D V+W+AL++ +A 
Sbjct: 78  GRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYAR 137

Query: 368 NGLGRDALK 394
           NGL R A++
Sbjct: 138 NGLARMAME 146


>gb|EAY99379.1| hypothetical protein OsI_21347 [Oryza sativa Indica Group]
          Length = 484

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 3/129 (2%)
 Frame = +2

Query: 17  KPLRSSIPFSHKTLLHTAAAADLSPSHSPPAETST---PTVTGSISDLIALISSTHSIGG 187
           KP   +    H  L   AA +DL  + +     S+   P V  + + L+ L ++   +  
Sbjct: 18  KPTALAADDHHARLRAAAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLAT 77

Query: 188 ASKIHALLAKXXXXXXXXXXXXXXXXYSRCRSPESSRKLFEEFPDQDHVSWSALISAFAN 367
              +HA LA                 Y++CR P  +R++F+  P +D V+W+AL++ +A 
Sbjct: 78  GRAVHAQLAARGLDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYAR 137

Query: 368 NGLGRDALK 394
           NGL R A++
Sbjct: 138 NGLARMAME 146


>ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 37/94 (39%), Positives = 49/94 (52%)
 Frame = +2

Query: 119 TPTVTGSISDLIALISSTHSIGGASKIHALLAKXXXXXXXXXXXXXXXXYSRCRSPESSR 298
           TPT   S S L++   +T S+    +IHA + K                YS+CR+   +R
Sbjct: 53  TPTSV-SYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYAR 111

Query: 299 KLFEEFPDQDHVSWSALISAFANNGLGRDALKTF 400
           KL +E  + D VSWSALIS +A NGLG  AL  F
Sbjct: 112 KLVDESSEPDLVSWSALISGYAQNGLGGGALMAF 145


>emb|CBI30601.3| unnamed protein product [Vitis vinifera]
          Length = 501

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 37/94 (39%), Positives = 49/94 (52%)
 Frame = +2

Query: 119 TPTVTGSISDLIALISSTHSIGGASKIHALLAKXXXXXXXXXXXXXXXXYSRCRSPESSR 298
           TPT   S S L++   +T S+    +IHA + K                YS+CR+   +R
Sbjct: 43  TPTSV-SYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYAR 101

Query: 299 KLFEEFPDQDHVSWSALISAFANNGLGRDALKTF 400
           KL +E  + D VSWSALIS +A NGLG  AL  F
Sbjct: 102 KLVDESSEPDLVSWSALISGYAQNGLGGGALMAF 135


>ref|XP_006357349.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like isoform X1 [Solanum tuberosum]
           gi|565382025|ref|XP_006357350.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like isoform X2 [Solanum tuberosum]
           gi|565382027|ref|XP_006357351.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like isoform X3 [Solanum tuberosum]
          Length = 918

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/88 (35%), Positives = 49/88 (55%)
 Frame = +2

Query: 137 SISDLIALISSTHSIGGASKIHALLAKXXXXXXXXXXXXXXXXYSRCRSPESSRKLFEEF 316
           S ++L++ +S T S+    +IHA L K                YS+C   + ++KL +E 
Sbjct: 43  SYTNLLSHLSKTKSLTPGFQIHAHLTKLGLSNHSKYRNHLVNLYSKCGIFQYAQKLIDES 102

Query: 317 PDQDHVSWSALISAFANNGLGRDALKTF 400
           P+ D VSWS+LIS ++ NG G+DA+  F
Sbjct: 103 PEPDLVSWSSLISGYSQNGFGKDAIWGF 130


>ref|XP_004237632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Solanum lycopersicum]
          Length = 914

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/88 (35%), Positives = 49/88 (55%)
 Frame = +2

Query: 137 SISDLIALISSTHSIGGASKIHALLAKXXXXXXXXXXXXXXXXYSRCRSPESSRKLFEEF 316
           S ++L++ +S T S+    +IHA L K                YS+C   + ++KL +E 
Sbjct: 39  SYTNLLSNLSKTKSLTPGLQIHAHLTKLGLSNHSKYRNHLVNLYSKCGIFQYAQKLIDES 98

Query: 317 PDQDHVSWSALISAFANNGLGRDALKTF 400
           P+ D VSWS+LIS ++ NG G+DA+  F
Sbjct: 99  PEPDLVSWSSLISGYSQNGFGKDAIWGF 126


>emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 37/94 (39%), Positives = 48/94 (51%)
 Frame = +2

Query: 119 TPTVTGSISDLIALISSTHSIGGASKIHALLAKXXXXXXXXXXXXXXXXYSRCRSPESSR 298
           TPT   S S L++   +T S+    +IHA + K                YS+CR    +R
Sbjct: 53  TPTSV-SYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYAR 111

Query: 299 KLFEEFPDQDHVSWSALISAFANNGLGRDALKTF 400
           KL +E  + D VSWSALIS +A NGLG  AL  F
Sbjct: 112 KLVDESSEPDLVSWSALISGYAQNGLGGGALMAF 145


>gb|EOY28177.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 946

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 31/94 (32%), Positives = 48/94 (51%)
 Frame = +2

Query: 119 TPTVTGSISDLIALISSTHSIGGASKIHALLAKXXXXXXXXXXXXXXXXYSRCRSPESSR 298
           TP      S L++  ++T +     +IHA+  K                Y++C+    +R
Sbjct: 65  TPISVPYYSKLLSKCNATKNPSPGMQIHAITIKFGSTKDPKSRNLLISLYAKCKLFRYAR 124

Query: 299 KLFEEFPDQDHVSWSALISAFANNGLGRDALKTF 400
           KL +E P+ D VSWSALIS +A NG G++A+  F
Sbjct: 125 KLVDESPEPDLVSWSALISGYAQNGFGKEAILAF 158