BLASTX nr result
ID: Zingiber25_contig00043714
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00043714
(437 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY17514.1| Uncharacterized protein TCM_042330 [Theobroma cacao] 55 2e-15
gb|EOY02239.1| Uncharacterized protein TCM_016763 [Theobroma cacao] 57 2e-15
gb|EOY06960.1| Uncharacterized protein TCM_021522 [Theobroma cacao] 56 4e-15
gb|EOY17513.1| Uncharacterized protein TCM_036737 [Theobroma cacao] 54 4e-15
gb|EOY25449.1| Uncharacterized protein TCM_016755 [Theobroma cacao] 57 9e-15
gb|EOY19200.1| Retrotransposon, unclassified-like protein [Theob... 52 1e-14
gb|EOY14356.1| Uncharacterized protein TCM_033752 [Theobroma cacao] 55 2e-14
gb|EOY02238.1| Uncharacterized protein TCM_016762 [Theobroma cacao] 54 2e-14
gb|EOY25454.1| Uncharacterized protein TCM_026877 [Theobroma cacao] 57 4e-14
gb|EOY02236.1| Uncharacterized protein TCM_011923 [Theobroma cacao] 56 3e-13
gb|EOY03329.1| Uncharacterized protein TCM_018253 [Theobroma cacao] 51 2e-12
gb|EOY06956.1| Uncharacterized protein TCM_021518 [Theobroma cacao] 55 2e-11
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas... 62 3e-11
gb|EOY06959.1| Uncharacterized protein TCM_021521 [Theobroma cacao] 54 4e-11
ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein A... 45 2e-10
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas... 58 1e-09
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258... 55 7e-09
ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268... 53 7e-09
gb|EOX96782.1| Uncharacterized protein TCM_005953 [Theobroma cacao] 45 2e-08
ref|XP_004253499.1| PREDICTED: putative ribonuclease H protein A... 50 1e-07
>gb|EOY17514.1| Uncharacterized protein TCM_042330 [Theobroma cacao]
Length = 2249
Score = 55.5 bits (132), Expect(2) = 2e-15
Identities = 31/82 (37%), Positives = 44/82 (53%)
Frame = +1
Query: 190 RSNVGKSFFFPSKGISVARR*KIVLVTGFSEGAFPIFYLGVPIVAGVR*AVHF*PLIEKV 369
R NV KS F +S +RR I TGFS I YLG P+ G + + F L+ K+
Sbjct: 1594 RINVQKSCFVTHTNVSSSRRQIIAQTTGFSHQLLLITYLGAPLYKGHKKVILFNDLVAKI 1653
Query: 370 RKKLLGWNIAKLSHGGRLFLIQ 435
+++ GW LS GGR+ L++
Sbjct: 1654 EERITGWENKILSPGGRITLLR 1675
Score = 52.0 bits (123), Expect(2) = 2e-15
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +2
Query: 41 YTQLYLSSGCEYRVSHLVYADDIMILMNGSINGIKRVKSFLDFYMACSGQEV 196
Y L+ SSG VSHL +ADD++I NGS + ++R+ +FL Y SGQ +
Sbjct: 1544 YPSLHYSSGVSISVSHLAFADDVLIFTNGSKSALQRILAFLQEYQEISGQRI 1595
>gb|EOY02239.1| Uncharacterized protein TCM_016763 [Theobroma cacao]
Length = 2127
Score = 56.6 bits (135), Expect(2) = 2e-15
Identities = 31/80 (38%), Positives = 44/80 (55%)
Frame = +1
Query: 196 NVGKSFFFPSKGISVARR*KIVLVTGFSEGAFPIFYLGVPIVAGVR*AVHF*PLIEKVRK 375
N KS F + G S++RR I TGF P+ YLG P+ G + + F LI K+R
Sbjct: 1475 NHQKSCFITANGCSLSRRQIISHTTGFQHKTLPVTYLGAPLHKGPKKVLLFDSLISKIRD 1534
Query: 376 KLLGWNIAKLSHGGRLFLIQ 435
++ GW LS GGR+ L++
Sbjct: 1535 RISGWENKILSPGGRITLLR 1554
Score = 50.8 bits (120), Expect(2) = 2e-15
Identities = 23/52 (44%), Positives = 34/52 (65%)
Frame = +2
Query: 41 YTQLYLSSGCEYRVSHLVYADDIMILMNGSINGIKRVKSFLDFYMACSGQEV 196
Y+ L SGC+ +SHL +ADDI+I NG + ++++ SFL Y SGQ+V
Sbjct: 1423 YSSLQYLSGCQMPISHLSFADDIVIFTNGGRSALQKILSFLQEYEQVSGQKV 1474
>gb|EOY06960.1| Uncharacterized protein TCM_021522 [Theobroma cacao]
Length = 3503
Score = 53.9 bits (128), Expect(2) = 4e-15
Identities = 23/52 (44%), Positives = 34/52 (65%)
Frame = +2
Query: 41 YTQLYLSSGCEYRVSHLVYADDIMILMNGSINGIKRVKSFLDFYMACSGQEV 196
Y L+ SSGC +SHL +ADD++I NGS + ++R+ +FL Y SGQ +
Sbjct: 2797 YPSLHYSSGCSMPISHLAFADDVIIFANGSKSALQRILAFLQEYEELSGQRI 2848
Score = 52.8 bits (125), Expect(2) = 4e-15
Identities = 29/82 (35%), Positives = 44/82 (53%)
Frame = +1
Query: 190 RSNVGKSFFFPSKGISVARR*KIVLVTGFSEGAFPIFYLGVPIVAGVR*AVHF*PLIEKV 369
R N KS ++ +RR I+ TGFS PI YLG P+ G + + F L+ K+
Sbjct: 2847 RINPQKSCVVTHTNMASSRRQIILQATGFSHRPLPITYLGAPLFKGHKKVILFNDLVAKI 2906
Query: 370 RKKLLGWNIAKLSHGGRLFLIQ 435
+++ GW LS GGR+ L++
Sbjct: 2907 EERITGWENKILSPGGRITLLR 2928
Score = 55.8 bits (133), Expect(2) = 4e-09
Identities = 30/80 (37%), Positives = 44/80 (55%)
Frame = +1
Query: 196 NVGKSFFFPSKGISVARR*KIVLVTGFSEGAFPIFYLGVPIVAGVR*AVHF*PLIEKVRK 375
N KS F + G +++RR I TGF P+ YLG P+ G + + F LI K+R
Sbjct: 1055 NHQKSCFITTNGCALSRRQIISHTTGFHHKTLPVTYLGAPLHKGQKKVILFDSLISKIRD 1114
Query: 376 KLLGWNIAKLSHGGRLFLIQ 435
++ GW LS GGR+ L++
Sbjct: 1115 RISGWENKILSPGGRITLLR 1134
Score = 30.4 bits (67), Expect(2) = 4e-09
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 101 DDIMILMNGSINGIKRVKSFLDFYMACSGQEV 196
DDI+I NG + ++++ +FL Y SGQ+V
Sbjct: 1023 DDIVIFTNGCRSSLQKILNFLQEYEQVSGQQV 1054
>gb|EOY17513.1| Uncharacterized protein TCM_036737 [Theobroma cacao]
Length = 2215
Score = 53.9 bits (128), Expect(2) = 4e-15
Identities = 23/52 (44%), Positives = 34/52 (65%)
Frame = +2
Query: 41 YTQLYLSSGCEYRVSHLVYADDIMILMNGSINGIKRVKSFLDFYMACSGQEV 196
Y L+ SSGC VSHL +ADD++I NGS + ++++ +FL Y SGQ +
Sbjct: 1509 YPSLHYSSGCSLSVSHLAFADDVIIFANGSKSALQKIMAFLQEYEKLSGQRI 1560
Score = 52.8 bits (125), Expect(2) = 4e-15
Identities = 29/82 (35%), Positives = 44/82 (53%)
Frame = +1
Query: 190 RSNVGKSFFFPSKGISVARR*KIVLVTGFSEGAFPIFYLGVPIVAGVR*AVHF*PLIEKV 369
R N KS ++ +RR I+ TGFS PI YLG P+ G + + F L+ K+
Sbjct: 1559 RINPQKSCVVTHTNMASSRRQIILQATGFSHRPLPITYLGAPLYKGHKKVMLFNDLVAKI 1618
Query: 370 RKKLLGWNIAKLSHGGRLFLIQ 435
+++ GW LS GGR+ L++
Sbjct: 1619 EERITGWENKTLSPGGRITLLR 1640
>gb|EOY25449.1| Uncharacterized protein TCM_016755 [Theobroma cacao]
Length = 1245
Score = 57.0 bits (136), Expect(2) = 9e-15
Identities = 31/80 (38%), Positives = 41/80 (51%)
Frame = +1
Query: 196 NVGKSFFFPSKGISVARR*KIVLVTGFSEGAFPIFYLGVPIVAGVR*AVHF*PLIEKVRK 375
N KS F S G + RR I TGF P+ YLG P+ G + F LI K+R
Sbjct: 1050 NHQKSCFITSNGCPMTRRQIIAHTTGFQHKTLPVIYLGAPLHKGPKKVALFDSLITKIRD 1109
Query: 376 KLLGWNIAKLSHGGRLFLIQ 435
++ GW LS GGR+ L++
Sbjct: 1110 RISGWENKTLSPGGRITLLR 1129
Score = 48.5 bits (114), Expect(2) = 9e-15
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Frame = +2
Query: 8 WISSREGVSKGYTQLYLS-------SGCEYRVSHLVYADDIMILMNGSINGIKRVKSFLD 166
+I + E +S+G QL+ SGC +SHL +ADDI+I NG ++++ FL
Sbjct: 980 FILAAEYLSRGINQLFSDHKSLHYLSGCFMPISHLAFADDIVIFTNGCRPALQKILIFLQ 1039
Query: 167 FYMACSGQEV 196
Y A SGQ+V
Sbjct: 1040 EYEAVSGQQV 1049
>gb|EOY19200.1| Retrotransposon, unclassified-like protein [Theobroma cacao]
Length = 1368
Score = 52.4 bits (124), Expect(2) = 1e-14
Identities = 24/52 (46%), Positives = 32/52 (61%)
Frame = +2
Query: 41 YTQLYLSSGCEYRVSHLVYADDIMILMNGSINGIKRVKSFLDFYMACSGQEV 196
Y L+ SGC +SHL +ADDIMI NGS + ++++ FL Y SGQ V
Sbjct: 630 YISLHYHSGCSLNISHLAFADDIMIFTNGSKSVLEKILEFLQEYEQISGQRV 681
Score = 52.4 bits (124), Expect(2) = 1e-14
Identities = 30/82 (36%), Positives = 43/82 (52%)
Frame = +1
Query: 190 RSNVGKSFFFPSKGISVARR*KIVLVTGFSEGAFPIFYLGVPIVAGVR*AVHF*PLIEKV 369
R N KS F + + +RR I GF PI YLG P+ G + + F LI K+
Sbjct: 680 RVNHQKSCFVTANNMPSSRRQIISQTIGFLHKTLPITYLGAPLFKGPKKVMLFDSLINKI 739
Query: 370 RKKLLGWNIAKLSHGGRLFLIQ 435
R+++ GW LS GGR+ L++
Sbjct: 740 RERITGWENKILSPGGRITLLR 761
>gb|EOY14356.1| Uncharacterized protein TCM_033752 [Theobroma cacao]
Length = 2251
Score = 54.7 bits (130), Expect(2) = 2e-14
Identities = 30/82 (36%), Positives = 43/82 (52%)
Frame = +1
Query: 190 RSNVGKSFFFPSKGISVARR*KIVLVTGFSEGAFPIFYLGVPIVAGVR*AVHF*PLIEKV 369
R N KS F I +RR I TGF+ PI YLG P+ G + + F L+ K+
Sbjct: 1596 RINAQKSCFVTHTNIPNSRRQIIAQATGFNHQLLPITYLGAPLYKGHKKVILFNDLVAKI 1655
Query: 370 RKKLLGWNIAKLSHGGRLFLIQ 435
+++ GW LS GGR+ L++
Sbjct: 1656 EERITGWENKILSPGGRITLLR 1677
Score = 49.7 bits (117), Expect(2) = 2e-14
Identities = 23/52 (44%), Positives = 32/52 (61%)
Frame = +2
Query: 41 YTQLYLSSGCEYRVSHLVYADDIMILMNGSINGIKRVKSFLDFYMACSGQEV 196
Y L+ SSG VSHL +ADD++I NGS + ++R+ FL Y SGQ +
Sbjct: 1546 YPSLHYSSGVPLSVSHLAFADDVLIFTNGSKSALQRILVFLQEYEEISGQRI 1597
>gb|EOY02238.1| Uncharacterized protein TCM_016762 [Theobroma cacao]
Length = 2214
Score = 54.3 bits (129), Expect(2) = 2e-14
Identities = 30/80 (37%), Positives = 42/80 (52%)
Frame = +1
Query: 196 NVGKSFFFPSKGISVARR*KIVLVTGFSEGAFPIFYLGVPIVAGVR*AVHF*PLIEKVRK 375
N KS F + G ++RR I VTGF P+ YLG P+ G + F LI K+R
Sbjct: 1562 NHQKSCFITANGCPLSRRQIIAQVTGFQHKTLPVTYLGAPLHKGPKKVFLFDSLISKIRD 1621
Query: 376 KLLGWNIAKLSHGGRLFLIQ 435
++ GW LS G R+ L++
Sbjct: 1622 RISGWENKILSPGSRITLLR 1641
Score = 50.1 bits (118), Expect(2) = 2e-14
Identities = 23/52 (44%), Positives = 32/52 (61%)
Frame = +2
Query: 41 YTQLYLSSGCEYRVSHLVYADDIMILMNGSINGIKRVKSFLDFYMACSGQEV 196
Y L+ SGC VSHL +ADDI+I NG + ++++ FL Y SGQ+V
Sbjct: 1510 YNSLHYLSGCSMSVSHLAFADDIVIFTNGCHSALQKILVFLQEYEQVSGQQV 1561
>gb|EOY25454.1| Uncharacterized protein TCM_026877 [Theobroma cacao]
Length = 2367
Score = 56.6 bits (135), Expect(2) = 4e-14
Identities = 30/82 (36%), Positives = 44/82 (53%)
Frame = +1
Query: 190 RSNVGKSFFFPSKGISVARR*KIVLVTGFSEGAFPIFYLGVPIVAGVR*AVHF*PLIEKV 369
R N KS F +S +RR I TGF+ PI YLG P+ G + + F L+ K+
Sbjct: 1766 RINAQKSCFVTHTNVSSSRRQIIAQTTGFNHQLLPITYLGAPLYKGHKKVILFNDLVAKI 1825
Query: 370 RKKLLGWNIAKLSHGGRLFLIQ 435
+++ GW LS GGR+ L++
Sbjct: 1826 EERITGWENKILSPGGRITLLK 1847
Score = 46.6 bits (109), Expect(2) = 4e-14
Identities = 21/52 (40%), Positives = 32/52 (61%)
Frame = +2
Query: 41 YTQLYLSSGCEYRVSHLVYADDIMILMNGSINGIKRVKSFLDFYMACSGQEV 196
Y L+ S+G VSHL +ADD++I NGS + ++R+ +FL Y S Q +
Sbjct: 1716 YPSLHYSTGVSIPVSHLAFADDVLIFTNGSKSALQRILAFLQEYEEISRQRI 1767
>gb|EOY02236.1| Uncharacterized protein TCM_011923 [Theobroma cacao]
Length = 1954
Score = 55.8 bits (133), Expect(2) = 3e-13
Identities = 30/80 (37%), Positives = 41/80 (51%)
Frame = +1
Query: 196 NVGKSFFFPSKGISVARR*KIVLVTGFSEGAFPIFYLGVPIVAGVR*AVHF*PLIEKVRK 375
N KS F + G + RR I TGF P+ YLG P+ G + F LI K+R
Sbjct: 1301 NHQKSCFITANGCPMTRRQIIAHTTGFQHKTLPVIYLGAPLHKGPKKVTLFDSLITKIRD 1360
Query: 376 KLLGWNIAKLSHGGRLFLIQ 435
++ GW LS GGR+ L++
Sbjct: 1361 RISGWENKTLSPGGRITLLR 1380
Score = 44.7 bits (104), Expect(2) = 3e-13
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Frame = +2
Query: 8 WISSREGVSKGYTQLY-------LSSGCEYRVSHLVYADDIMILMNGSINGIKRVKSFLD 166
++ + + +S+G QL+ SGC +SHL +ADDI+I NG ++++ FL
Sbjct: 1231 FVLAADYLSRGINQLFNRHKSLLYLSGCFMPISHLAFADDIVIFTNGCRPALQKILVFLQ 1290
Query: 167 FYMACSGQEV 196
Y SGQ+V
Sbjct: 1291 EYEEVSGQQV 1300
>gb|EOY03329.1| Uncharacterized protein TCM_018253 [Theobroma cacao]
Length = 540
Score = 50.8 bits (120), Expect(2) = 2e-12
Identities = 28/80 (35%), Positives = 42/80 (52%)
Frame = +1
Query: 196 NVGKSFFFPSKGISVARR*KIVLVTGFSEGAFPIFYLGVPIVAGVR*AVHF*PLIEKVRK 375
N KS F + ++RR I TGF P+ YLG P+ G + + F LI K+R
Sbjct: 349 NHQKSCFIIANSCPLSRRQIISHTTGFQHKTLPVTYLGAPLYKGSKKVILFYSLITKIRD 408
Query: 376 KLLGWNIAKLSHGGRLFLIQ 435
++ GW+ LS GG + L++
Sbjct: 409 RISGWDNKVLSSGGCITLLR 428
Score = 46.6 bits (109), Expect(2) = 2e-12
Identities = 21/52 (40%), Positives = 32/52 (61%)
Frame = +2
Query: 41 YTQLYLSSGCEYRVSHLVYADDIMILMNGSINGIKRVKSFLDFYMACSGQEV 196
Y L+ GC ++HL + D+IMIL NG + +++V SFL Y SGQ++
Sbjct: 297 YNSLHYLLGCLMPITHLAFVDNIMILTNGCRSALQKVLSFLQEYEQVSGQQI 348
>gb|EOY06956.1| Uncharacterized protein TCM_021518 [Theobroma cacao]
Length = 1702
Score = 54.7 bits (130), Expect(2) = 2e-11
Identities = 32/86 (37%), Positives = 43/86 (50%)
Frame = +1
Query: 178 MLWTRSNVGKSFFFPSKGISVARR*KIVLVTGFSEGAFPIFYLGVPIVAGVR*AVHF*PL 357
M + N KS F + G S+ RR I TGF PI YLG P+ + F L
Sbjct: 917 MFGQQVNHQKSCFITANGCSMTRRQIIAHTTGFQHKILPIIYLGAPLHKVPKKVALFDSL 976
Query: 358 IEKVRKKLLGWNIAKLSHGGRLFLIQ 435
I K+R ++ GW LS GGR+ L++
Sbjct: 977 ITKIRDRISGWENKTLSPGGRITLLR 1002
Score = 39.7 bits (91), Expect(2) = 2e-11
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Frame = +2
Query: 8 WISSREGVSKGYTQLYLS-------SGCEYRVSHLVYADDIMILMNGSINGIKRVKSFLD 166
+I + + +S+G QL+ SGC +S L +ADDI+I NG ++++ FL
Sbjct: 853 FILAADYLSRGINQLFSHHKSLHYLSGCFMPISRLAFADDIVIFTNGCRPALQKILVFLQ 912
Query: 167 FYMACSGQEV 196
Y GQ+V
Sbjct: 913 EYEKMFGQQV 922
>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 642
Score = 61.6 bits (148), Expect(2) = 3e-11
Identities = 33/80 (41%), Positives = 46/80 (57%)
Frame = +1
Query: 196 NVGKSFFFPSKGISVARR*KIVLVTGFSEGAFPIFYLGVPIVAGVR*AVHF*PLIEKVRK 375
N+ KSF F GI+ R IV + GF+ G+ P YLG PI G +HF P+ +KV+
Sbjct: 462 NIRKSFIFAG-GITDTRMNNIVNILGFNVGSLPFTYLGAPIFKGKPKGIHFQPIADKVKA 520
Query: 376 KLLGWNIAKLSHGGRLFLIQ 435
KL W + LS GR+ L++
Sbjct: 521 KLAKWKASLLSIAGRIQLVK 540
Score = 32.0 bits (71), Expect(2) = 3e-11
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +2
Query: 35 KGYTQLYLSSGCEYRVSHLVYADDIMILMNGSINGIKRVKSFLDFYMACSGQEVM*VRVS 214
KG L +S H Y DD+M+ ++ + +KS Y CSGQ +M +R S
Sbjct: 408 KGLIDLIAASRNNCLPFHCFYVDDLMVFCKAKMSSLIVLKSLFTRYADCSGQ-IMNIRKS 466
>gb|EOY06959.1| Uncharacterized protein TCM_021521 [Theobroma cacao]
Length = 1951
Score = 54.3 bits (129), Expect(2) = 4e-11
Identities = 30/80 (37%), Positives = 43/80 (53%)
Frame = +1
Query: 196 NVGKSFFFPSKGISVARR*KIVLVTGFSEGAFPIFYLGVPIVAGVR*AVHF*PLIEKVRK 375
N KS F + G +++RR I TGF P+ YLG P+ G + F LI K+R
Sbjct: 1298 NHQKSCFITANGCALSRRQIISHTTGFHHKTLPVTYLGAPLHKGPKKVFLFDSLISKIRD 1357
Query: 376 KLLGWNIAKLSHGGRLFLIQ 435
++ GW LS GGR+ L++
Sbjct: 1358 RISGWENKILSPGGRITLLR 1377
Score = 38.9 bits (89), Expect(2) = 4e-11
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +2
Query: 41 YTQLYLSSGCEYRVSHLVYADDIMILMNGSINGIKRVKSFLDFYMACSGQEV 196
+ L + C+ SHL +ADDI+I NG + ++++ +FL Y SGQ+V
Sbjct: 1247 FQNLLKAENCDLS-SHLSFADDIVIFTNGCRSSLQKILNFLQEYEQVSGQQV 1297
>ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 751
Score = 45.4 bits (106), Expect(2) = 2e-10
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 9/69 (13%)
Frame = +2
Query: 17 SREGVSKGYTQLYLSS---------GCEYRVSHLVYADDIMILMNGSINGIKRVKSFLDF 169
+ E +S+G T L+ S GC ++H++YADD+ I G +++++SFLD
Sbjct: 94 AEEALSRGLTALFSSKKVRSISLPRGCS--LTHVLYADDLFIFCRGDTKSLRQLQSFLDN 151
Query: 170 YMACSGQEV 196
Y A SGQ V
Sbjct: 152 YGAASGQLV 160
Score = 45.4 bits (106), Expect(2) = 2e-10
Identities = 24/63 (38%), Positives = 33/63 (52%)
Frame = +1
Query: 244 RR*KIVLVTGFSEGAFPIFYLGVPIVAGVR*AVHF*PLIEKVRKKLLGWNIAKLSHGGRL 423
RR ++ + GF G P YLGVPI G H L++K + +L GW LS GR+
Sbjct: 176 RRHQVKKILGFKLGTSPFSYLGVPIFKGKPCRKHLQALVDKAKARLAGWKGKLLSMAGRV 235
Query: 424 FLI 432
L+
Sbjct: 236 QLV 238
>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 528
Score = 57.8 bits (138), Expect(2) = 1e-09
Identities = 31/73 (42%), Positives = 46/73 (63%)
Frame = +1
Query: 217 FPSKGISVARR*KIVLVTGFSEGAFPIFYLGVPIVAGVR*AVHF*PLIEKVRKKLLGWNI 396
F + GIS AR +++ V GF++G+FP YLGVPI G A P+++K++ KL W
Sbjct: 374 FCNGGISDARLQQLINVIGFNKGSFPFNYLGVPIFKGKPKARFLQPIVDKIKTKLSNWKA 433
Query: 397 AKLSHGGRLFLIQ 435
+ LS GR+ LI+
Sbjct: 434 SILSIAGRVQLIK 446
Score = 30.4 bits (67), Expect(2) = 1e-09
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 83 SHLVYADDIMILMNGSIN 136
SH++YADDIMI NG I+
Sbjct: 363 SHILYADDIMIFCNGGIS 380
>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
lycopersicum]
Length = 1454
Score = 55.5 bits (132), Expect(2) = 7e-09
Identities = 29/80 (36%), Positives = 47/80 (58%)
Frame = +1
Query: 196 NVGKSFFFPSKGISVARR*KIVLVTGFSEGAFPIFYLGVPIVAGVR*AVHF*PLIEKVRK 375
N KSFF + S +I +TGFS PI YLG P+ G + +++ ++EKV K
Sbjct: 787 NKDKSFFMVTSNTSHDIIEEISRITGFSRKNSPINYLGCPLYVGGQRIIYYSEIVEKVIK 846
Query: 376 KLLGWNIAKLSHGGRLFLIQ 435
K+ GW++ L+ GG++ L++
Sbjct: 847 KIAGWHLKILNFGGKVTLVK 866
Score = 30.0 bits (66), Expect(2) = 7e-09
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 77 RVSHLVYADDIMILMNGSINGIKRVKSFLDFYMACSGQEV 196
+++HL +ADDI+I + N + + +D Y S Q+V
Sbjct: 747 KINHLSFADDIIIFSSTDNNSLNLIMKTIDQYEEVSDQKV 786
>ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum
lycopersicum]
Length = 1333
Score = 52.8 bits (125), Expect(2) = 7e-09
Identities = 28/80 (35%), Positives = 45/80 (56%)
Frame = +1
Query: 196 NVGKSFFFPSKGISVARR*KIVLVTGFSEGAFPIFYLGVPIVAGVR*AVHF*PLIEKVRK 375
N KSFF + +I TGF+ PI YLG P+ +G + +++ L+EKV K
Sbjct: 665 NKEKSFFMVTANTGYDIIEEIKTATGFNRKNSPINYLGCPLYSGGQRIIYYSELVEKVIK 724
Query: 376 KLLGWNIAKLSHGGRLFLIQ 435
K+ GW+ L+ GG++ L++
Sbjct: 725 KISGWHSKLLNFGGKIILVK 744
Score = 32.7 bits (73), Expect(2) = 7e-09
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 77 RVSHLVYADDIMILMNGSINGIKRVKSFLDFYMACSGQEV 196
+++HL +ADDI+I + N I + ++ Y A S Q+V
Sbjct: 625 KINHLSFADDIIIFTSTDTNSIHIIMKTIELYEAVSDQQV 664
>gb|EOX96782.1| Uncharacterized protein TCM_005953 [Theobroma cacao]
Length = 1659
Score = 45.1 bits (105), Expect(2) = 2e-08
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Frame = +2
Query: 8 WISSREGVSKGYTQLYLS-------SGCEYRVSHLVYADDIMILMNGSINGIKRVKSFLD 166
+I + + +S+G QL+ SGC +SHL +ADDI+I NG ++++ FL
Sbjct: 1128 FILAADYLSRGINQLFSHHKSLLYLSGCFMPISHLAFADDIVIFTNGCRPALQKILVFLQ 1187
Query: 167 FYMACSGQEV 196
Y SGQ+V
Sbjct: 1188 EYEEVSGQQV 1197
Score = 38.9 bits (89), Expect(2) = 2e-08
Identities = 23/62 (37%), Positives = 29/62 (46%)
Frame = +1
Query: 196 NVGKSFFFPSKGISVARR*KIVLVTGFSEGAFPIFYLGVPIVAGVR*AVHF*PLIEKVRK 375
N KS F + G + R I TGF P+ YLGVP+ G + F LI K+R
Sbjct: 1198 NHQKSCFITANGCPMTMRQIIAHTTGFQHKTLPVIYLGVPLHKGPKKVTLFDSLITKIRD 1257
Query: 376 KL 381
L
Sbjct: 1258 LL 1259
>ref|XP_004253499.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 314
Score = 50.1 bits (118), Expect(2) = 1e-07
Identities = 29/78 (37%), Positives = 41/78 (52%)
Frame = +1
Query: 196 NVGKSFFFPSKGISVARR*KIVLVTGFSEGAFPIFYLGVPIVAGVR*AVHF*PLIEKVRK 375
N KS F + R +I +TGF + PI YLG P+ G V+F LI KV
Sbjct: 47 NEDKSHFMLHPSAFNSTRDRIKRLTGFKQKQGPITYLGCPLFVGRPRNVYFSNLINKVIS 106
Query: 376 KLLGWNIAKLSHGGRLFL 429
++ GW +LS+GG++ L
Sbjct: 107 RITGWQTKQLSYGGKVVL 124
Score = 31.2 bits (69), Expect(2) = 1e-07
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 77 RVSHLVYADDIMILMNGSINGIKRVKSFLDFYMACSGQ 190
+V+HL +ADDI++ +G +K + S L Y SGQ
Sbjct: 7 QVNHLSFADDIILFTSGRSKTLKLLMSTLKAYEETSGQ 44