BLASTX nr result
ID: Zingiber25_contig00043615
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00043615
(573 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containi... 230 2e-58
emb|CBI41122.3| unnamed protein product [Vitis vinifera] 230 2e-58
ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containi... 229 5e-58
emb|CBI23556.3| unnamed protein product [Vitis vinifera] 229 5e-58
ref|XP_006422178.1| hypothetical protein CICLE_v10006927mg [Citr... 228 1e-57
ref|XP_003634143.1| PREDICTED: pentatricopeptide repeat-containi... 227 1e-57
gb|EMJ18239.1| hypothetical protein PRUPE_ppa001611mg [Prunus pe... 225 5e-57
gb|EOY23498.1| Tetratricopeptide repeat-like superfamily protein... 223 3e-56
ref|XP_002522011.1| pentatricopeptide repeat-containing protein,... 223 4e-56
ref|XP_002321443.2| hypothetical protein POPTR_0015s02060g [Popu... 219 4e-55
ref|XP_004306045.1| PREDICTED: pentatricopeptide repeat-containi... 219 4e-55
ref|XP_004231236.1| PREDICTED: pentatricopeptide repeat-containi... 211 1e-52
ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 206 3e-51
ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containi... 206 3e-51
gb|EXC74714.1| hypothetical protein L484_000366 [Morus notabilis] 203 2e-50
ref|XP_006347856.1| PREDICTED: pentatricopeptide repeat-containi... 203 3e-50
ref|XP_006404168.1| hypothetical protein EUTSA_v10010119mg [Eutr... 197 1e-48
ref|XP_004960622.1| PREDICTED: pentatricopeptide repeat-containi... 195 8e-48
ref|XP_006290593.1| hypothetical protein CARUB_v10016682mg [Caps... 194 2e-47
gb|AFW77542.1| putative pentatricopeptide repeat family protein ... 193 3e-47
>ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 230 bits (587), Expect = 2e-58
Identities = 113/193 (58%), Positives = 147/193 (76%), Gaps = 3/193 (1%)
Frame = +2
Query: 2 LEFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSL---MDDSRKVFDRMDEHSVMSWTTI 172
L G+ +HS+ IRLGLA D CVGC+LVDMYAKC+ +DDSRKVF++M EH+VMSWT I
Sbjct: 67 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 126
Query: 173 ISGYAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSG 352
I+ YAQS D++AIELF MI+G +RPNHF++SS+LKAC NL+D G+Q+++ +K G
Sbjct: 127 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 186
Query: 353 LAFVNFVGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLY 532
+A VN VGNSL+SMYAR GRME+A +AFD L+EKN+VS NAI DG AKN E+A +
Sbjct: 187 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 246
Query: 533 QIQSMDMGANAFT 571
+I +G +AFT
Sbjct: 247 EIADTGIGISAFT 259
Score = 120 bits (300), Expect = 3e-25
Identities = 61/187 (32%), Positives = 113/187 (60%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G ++S A++LG+A CVG +L+ MYA+ M+D+RK FD + E +++S+ I+ GYA+
Sbjct: 175 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 234
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNF 370
+ + E+A LF + + + + FT++S+L A++ G+QIH R++K G
Sbjct: 235 N-LKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC 293
Query: 371 VGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQIQSMD 550
+ N+L+SMY+R G +E A + F+ + ++NV+S ++ G AK+ +A+E+ +++
Sbjct: 294 ICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG 353
Query: 551 MGANAFT 571
N T
Sbjct: 354 TKPNEIT 360
Score = 94.7 bits (234), Expect = 1e-17
Identities = 58/154 (37%), Positives = 95/154 (61%), Gaps = 4/154 (2%)
Frame = +2
Query: 122 KVFDRMDEHSVMSWTTIISGYAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANL 301
KVFD+M E ++++WT +I+ +AQ + AI+LF++M P+ FTYSS+L AC L
Sbjct: 6 KVFDKMPERNLVTWTLMITRFAQLGCARD-AIDLFLDMELSGYVPDRFTYSSVLSACTEL 64
Query: 302 ADSQVGQQIHARVIKSGLAFVNFVGNSLVSMYARF---GRMEEAIRAFDSLYEKNVVSCN 472
+G+Q+H+RVI+ GLA VG SLV MYA+ G ++++ + F+ + E NV+S
Sbjct: 65 GLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWT 124
Query: 473 AIADGCAKNYNYE-QAIEVLYQIQSMDMGANAFT 571
AI A++ + +AIE+ ++ S + N F+
Sbjct: 125 AIITAYAQSGECDKEAIELFCKMISGHIRPNHFS 158
Score = 74.7 bits (182), Expect = 2e-11
Identities = 39/146 (26%), Positives = 81/146 (55%), Gaps = 1/146 (0%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G +H + ++ G + C+ L+ MY++C ++ + +VF+ M++ +V+SWT++I+G+A+
Sbjct: 276 GEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAK 335
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKS-GLAFVN 367
+A+E+F M+ +PN TY ++L AC+++ GQ+ + K G+
Sbjct: 336 HGFAT-RALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRM 394
Query: 368 FVGNSLVSMYARFGRMEEAIRAFDSL 445
+V + R G + EA+ +S+
Sbjct: 395 EHYACMVDLLGRSGLLVEAMEFINSM 420
>emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 230 bits (587), Expect = 2e-58
Identities = 113/193 (58%), Positives = 147/193 (76%), Gaps = 3/193 (1%)
Frame = +2
Query: 2 LEFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSL---MDDSRKVFDRMDEHSVMSWTTI 172
L G+ +HS+ IRLGLA D CVGC+LVDMYAKC+ +DDSRKVF++M EH+VMSWT I
Sbjct: 72 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 131
Query: 173 ISGYAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSG 352
I+ YAQS D++AIELF MI+G +RPNHF++SS+LKAC NL+D G+Q+++ +K G
Sbjct: 132 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 191
Query: 353 LAFVNFVGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLY 532
+A VN VGNSL+SMYAR GRME+A +AFD L+EKN+VS NAI DG AKN E+A +
Sbjct: 192 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 251
Query: 533 QIQSMDMGANAFT 571
+I +G +AFT
Sbjct: 252 EIADTGIGISAFT 264
Score = 120 bits (300), Expect = 3e-25
Identities = 61/187 (32%), Positives = 113/187 (60%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G ++S A++LG+A CVG +L+ MYA+ M+D+RK FD + E +++S+ I+ GYA+
Sbjct: 180 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 239
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNF 370
+ + E+A LF + + + + FT++S+L A++ G+QIH R++K G
Sbjct: 240 N-LKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC 298
Query: 371 VGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQIQSMD 550
+ N+L+SMY+R G +E A + F+ + ++NV+S ++ G AK+ +A+E+ +++
Sbjct: 299 ICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG 358
Query: 551 MGANAFT 571
N T
Sbjct: 359 TKPNEIT 365
Score = 94.7 bits (234), Expect = 1e-17
Identities = 58/154 (37%), Positives = 95/154 (61%), Gaps = 4/154 (2%)
Frame = +2
Query: 122 KVFDRMDEHSVMSWTTIISGYAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANL 301
KVFD+M E ++++WT +I+ +AQ + AI+LF++M P+ FTYSS+L AC L
Sbjct: 11 KVFDKMPERNLVTWTLMITRFAQLGCARD-AIDLFLDMELSGYVPDRFTYSSVLSACTEL 69
Query: 302 ADSQVGQQIHARVIKSGLAFVNFVGNSLVSMYARF---GRMEEAIRAFDSLYEKNVVSCN 472
+G+Q+H+RVI+ GLA VG SLV MYA+ G ++++ + F+ + E NV+S
Sbjct: 70 GLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWT 129
Query: 473 AIADGCAKNYNYE-QAIEVLYQIQSMDMGANAFT 571
AI A++ + +AIE+ ++ S + N F+
Sbjct: 130 AIITAYAQSGECDKEAIELFCKMISGHIRPNHFS 163
Score = 74.7 bits (182), Expect = 2e-11
Identities = 39/146 (26%), Positives = 81/146 (55%), Gaps = 1/146 (0%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G +H + ++ G + C+ L+ MY++C ++ + +VF+ M++ +V+SWT++I+G+A+
Sbjct: 281 GEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAK 340
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKS-GLAFVN 367
+A+E+F M+ +PN TY ++L AC+++ GQ+ + K G+
Sbjct: 341 HGFAT-RALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRM 399
Query: 368 FVGNSLVSMYARFGRMEEAIRAFDSL 445
+V + R G + EA+ +S+
Sbjct: 400 EHYACMVDLLGRSGLLVEAMEFINSM 425
>ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 229 bits (583), Expect = 5e-58
Identities = 112/193 (58%), Positives = 146/193 (75%), Gaps = 3/193 (1%)
Frame = +2
Query: 2 LEFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSL---MDDSRKVFDRMDEHSVMSWTTI 172
L G+ +HS+ IRLGLA D CVGC+LVDMYAKC+ +DDSRKVF++M EH+VMSWT I
Sbjct: 247 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 306
Query: 173 ISGYAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSG 352
I+ Y QS D++AIELF MI+G +RPNHF++SS+LKAC NL+D G+Q+++ +K G
Sbjct: 307 ITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 366
Query: 353 LAFVNFVGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLY 532
+A VN VGNSL+SMYAR GRME+A +AFD L+EKN+VS NAI DG AKN E+A +
Sbjct: 367 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 426
Query: 533 QIQSMDMGANAFT 571
+I +G +AFT
Sbjct: 427 EIADTGIGISAFT 439
Score = 120 bits (300), Expect = 3e-25
Identities = 61/187 (32%), Positives = 113/187 (60%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G ++S A++LG+A CVG +L+ MYA+ M+D+RK FD + E +++S+ I+ GYA+
Sbjct: 355 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 414
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNF 370
+ + E+A LF + + + + FT++S+L A++ G+QIH R++K G
Sbjct: 415 N-LKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC 473
Query: 371 VGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQIQSMD 550
+ N+L+SMY+R G +E A + F+ + ++NV+S ++ G AK+ +A+E+ +++
Sbjct: 474 ICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG 533
Query: 551 MGANAFT 571
N T
Sbjct: 534 TKPNEIT 540
Score = 111 bits (277), Expect = 1e-22
Identities = 70/193 (36%), Positives = 115/193 (59%), Gaps = 6/193 (3%)
Frame = +2
Query: 11 GRSMHSQAIRLG-LAHDACVGCTLVDMYAKCSL-MDDSRKVFDRMDEHSVMSWTTIISGY 184
G ++ ++ G L D CVGC L+DM+ K S + + KVFD+M E ++++WT +I+ +
Sbjct: 147 GEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRF 206
Query: 185 AQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFV 364
AQ + AI+LF++M P+ FTYSS+L AC L +G+Q+H+RVI+ GLA
Sbjct: 207 AQLGCARD-AIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALD 265
Query: 365 NFVGNSLVSMYARF---GRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYE-QAIEVLY 532
VG SLV MYA+ G ++++ + F+ + E NV+S AI ++ + +AIE+
Sbjct: 266 VCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFC 325
Query: 533 QIQSMDMGANAFT 571
++ S + N F+
Sbjct: 326 KMISGHIRPNHFS 338
Score = 85.9 bits (211), Expect = 7e-15
Identities = 49/173 (28%), Positives = 103/173 (59%), Gaps = 8/173 (4%)
Frame = +2
Query: 5 EFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRM-DEHSVMSWTTIISG 181
+ G+ +H + ++ GL D+ V TL+ +Y+KC + +R +F+ M ++ ++SW+ ++S
Sbjct: 43 QLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSC 102
Query: 182 YAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAF 361
+A +SM + +AI F++M+ PN + ++++++AC+N + VG+ I+ V+K+G
Sbjct: 103 FANNSM-EWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLE 161
Query: 362 VNF-VGNSLVSMYAR-FGRMEEAIRAFDSLYEKNVVSCNAIAD-----GCAKN 499
+ VG L+ M+ + G + A + FD + E+N+V+ + GCA++
Sbjct: 162 ADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARD 214
Score = 74.7 bits (182), Expect = 2e-11
Identities = 39/146 (26%), Positives = 81/146 (55%), Gaps = 1/146 (0%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G +H + ++ G + C+ L+ MY++C ++ + +VF+ M++ +V+SWT++I+G+A+
Sbjct: 456 GEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAK 515
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKS-GLAFVN 367
+A+E+F M+ +PN TY ++L AC+++ GQ+ + K G+
Sbjct: 516 HGFAT-RALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRM 574
Query: 368 FVGNSLVSMYARFGRMEEAIRAFDSL 445
+V + R G + EA+ +S+
Sbjct: 575 EHYACMVDLLGRSGLLVEAMEFINSM 600
>emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 229 bits (583), Expect = 5e-58
Identities = 112/193 (58%), Positives = 146/193 (75%), Gaps = 3/193 (1%)
Frame = +2
Query: 2 LEFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSL---MDDSRKVFDRMDEHSVMSWTTI 172
L G+ +HS+ IRLGLA D CVGC+LVDMYAKC+ +DDSRKVF++M EH+VMSWT I
Sbjct: 265 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 324
Query: 173 ISGYAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSG 352
I+ Y QS D++AIELF MI+G +RPNHF++SS+LKAC NL+D G+Q+++ +K G
Sbjct: 325 ITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 384
Query: 353 LAFVNFVGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLY 532
+A VN VGNSL+SMYAR GRME+A +AFD L+EKN+VS NAI DG AKN E+A +
Sbjct: 385 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 444
Query: 533 QIQSMDMGANAFT 571
+I +G +AFT
Sbjct: 445 EIADTGIGISAFT 457
Score = 120 bits (300), Expect = 3e-25
Identities = 61/187 (32%), Positives = 113/187 (60%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G ++S A++LG+A CVG +L+ MYA+ M+D+RK FD + E +++S+ I+ GYA+
Sbjct: 373 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 432
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNF 370
+ + E+A LF + + + + FT++S+L A++ G+QIH R++K G
Sbjct: 433 N-LKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC 491
Query: 371 VGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQIQSMD 550
+ N+L+SMY+R G +E A + F+ + ++NV+S ++ G AK+ +A+E+ +++
Sbjct: 492 ICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG 551
Query: 551 MGANAFT 571
N T
Sbjct: 552 TKPNEIT 558
Score = 111 bits (277), Expect = 1e-22
Identities = 70/193 (36%), Positives = 115/193 (59%), Gaps = 6/193 (3%)
Frame = +2
Query: 11 GRSMHSQAIRLG-LAHDACVGCTLVDMYAKCSL-MDDSRKVFDRMDEHSVMSWTTIISGY 184
G ++ ++ G L D CVGC L+DM+ K S + + KVFD+M E ++++WT +I+ +
Sbjct: 165 GEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRF 224
Query: 185 AQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFV 364
AQ + AI+LF++M P+ FTYSS+L AC L +G+Q+H+RVI+ GLA
Sbjct: 225 AQLGCARD-AIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALD 283
Query: 365 NFVGNSLVSMYARF---GRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYE-QAIEVLY 532
VG SLV MYA+ G ++++ + F+ + E NV+S AI ++ + +AIE+
Sbjct: 284 VCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFC 343
Query: 533 QIQSMDMGANAFT 571
++ S + N F+
Sbjct: 344 KMISGHIRPNHFS 356
Score = 85.9 bits (211), Expect = 7e-15
Identities = 49/173 (28%), Positives = 103/173 (59%), Gaps = 8/173 (4%)
Frame = +2
Query: 5 EFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRM-DEHSVMSWTTIISG 181
+ G+ +H + ++ GL D+ V TL+ +Y+KC + +R +F+ M ++ ++SW+ ++S
Sbjct: 61 QLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSC 120
Query: 182 YAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAF 361
+A +SM + +AI F++M+ PN + ++++++AC+N + VG+ I+ V+K+G
Sbjct: 121 FANNSM-EWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLE 179
Query: 362 VNF-VGNSLVSMYAR-FGRMEEAIRAFDSLYEKNVVSCNAIAD-----GCAKN 499
+ VG L+ M+ + G + A + FD + E+N+V+ + GCA++
Sbjct: 180 ADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARD 232
Score = 74.7 bits (182), Expect = 2e-11
Identities = 39/146 (26%), Positives = 81/146 (55%), Gaps = 1/146 (0%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G +H + ++ G + C+ L+ MY++C ++ + +VF+ M++ +V+SWT++I+G+A+
Sbjct: 474 GEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAK 533
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKS-GLAFVN 367
+A+E+F M+ +PN TY ++L AC+++ GQ+ + K G+
Sbjct: 534 HGFAT-RALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRM 592
Query: 368 FVGNSLVSMYARFGRMEEAIRAFDSL 445
+V + R G + EA+ +S+
Sbjct: 593 EHYACMVDLLGRSGLLVEAMEFINSM 618
>ref|XP_006422178.1| hypothetical protein CICLE_v10006927mg [Citrus clementina]
gi|568874825|ref|XP_006490514.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Citrus sinensis]
gi|557524051|gb|ESR35418.1| hypothetical protein
CICLE_v10006927mg [Citrus clementina]
Length = 861
Score = 228 bits (580), Expect = 1e-57
Identities = 109/190 (57%), Positives = 146/190 (76%), Gaps = 3/190 (1%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSL---MDDSRKVFDRMDEHSVMSWTTIISG 181
G+ +HS AIR GLA D CVGC+LVDMYAKC++ +DDSRKVFDRM +H+VMSWT II+G
Sbjct: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
Query: 182 YAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAF 361
Y QS D++A++LF +MI G V PNHFT++S+LKAC NL DS V +Q++ +K G A
Sbjct: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSSVAEQVYTHAVKRGRAL 421
Query: 362 VNFVGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQIQ 541
+ VGNSL+SMYAR GRME+A +AF+SL+EKN+VS N + D AKN N E+A E+L++I+
Sbjct: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
Query: 542 SMDMGANAFT 571
+G +A+T
Sbjct: 482 DTGVGTSAYT 491
Score = 120 bits (300), Expect = 3e-25
Identities = 60/184 (32%), Positives = 115/184 (62%)
Frame = +2
Query: 20 MHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQSSM 199
+++ A++ G A D CVG +L+ MYA+ M+D+RK F+ + E +++S+ T++ YA++ +
Sbjct: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN-L 468
Query: 200 HDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNFVGN 379
+ EKA EL + + V + +T++S+L +++ G+QIHAR+IKSG + + N
Sbjct: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
Query: 380 SLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQIQSMDMGA 559
+L+SMY+R +E A + F + ++NV+S ++ G AK+ +A+E+ Y++ + +
Sbjct: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
Query: 560 NAFT 571
N T
Sbjct: 589 NGIT 592
Score = 102 bits (255), Expect = 5e-20
Identities = 61/177 (34%), Positives = 102/177 (57%), Gaps = 5/177 (2%)
Frame = +2
Query: 56 DACVGCTLVDMYAKCSL-MDDSRKVFDRMDEHSVMSWTTIISGYAQSSMHDEKAIELFIN 232
D CVGC L+DM+ K S+ ++ + KVFD+M E + + WT +I+ Q + AI LF++
Sbjct: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRD-AIRLFLD 273
Query: 233 MINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNFVGNSLVSMYARF-- 406
MI P+ FT S ++ AC+ L G+Q+H+ I++GLA VG SLV MYA+
Sbjct: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
Query: 407 -GRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYE-QAIEVLYQIQSMDMGANAFT 571
G ++++ + FD + + NV+S AI G ++ + +A+++ + + N FT
Sbjct: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
Score = 81.3 bits (199), Expect = 2e-13
Identities = 44/165 (26%), Positives = 91/165 (55%), Gaps = 3/165 (1%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRM-DEHSVMSWTTIISGYA 187
G+ +HS R L ++ + +L+ +Y+KC ++++ K+F M ++ ++SW+++IS Y
Sbjct: 97 GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
Query: 188 QSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVN 367
+ AI +F+ M+ PN + +S++++AC+N + +G I+ ++K G +
Sbjct: 157 NRGKQVD-AIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
Query: 368 F-VGNSLVSMYARFG-RMEEAIRAFDSLYEKNVVSCNAIADGCAK 496
VG +L+ M+ + +E A + FD + EKN V + C +
Sbjct: 216 VCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
Score = 75.1 bits (183), Expect = 1e-11
Identities = 40/147 (27%), Positives = 82/147 (55%), Gaps = 2/147 (1%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G +H++ I+ G + C+ L+ MY++C+ ++ + +VF M++ +V+SWT++I+G+A+
Sbjct: 508 GEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK 567
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNF 370
+A+E+F M+ ++PN TY ++L AC++ G + H R + V
Sbjct: 568 HGF-AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK-HFRSMYDEHGIVQR 625
Query: 371 VGN--SLVSMYARFGRMEEAIRAFDSL 445
+ + +V + R G + EA+ S+
Sbjct: 626 MEHYACMVDLLGRSGSLTEALEFIRSM 652
>ref|XP_003634143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Vitis vinifera]
Length = 631
Score = 227 bits (579), Expect = 1e-57
Identities = 112/193 (58%), Positives = 145/193 (75%), Gaps = 3/193 (1%)
Frame = +2
Query: 2 LEFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSL---MDDSRKVFDRMDEHSVMSWTTI 172
L G+ +HS+ IRLGLA D CVGC+LVDMYAKC+ +DDSRKVF+RM EH+VMSWT I
Sbjct: 296 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFERMPEHNVMSWTAI 355
Query: 173 ISGYAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSG 352
I+ Y QS D++AIELF MI+G + PNHF++SS+LKAC NL+D G+Q+++ +K G
Sbjct: 356 ITAYVQSGECDKEAIELFCKMISGHIWPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 415
Query: 353 LAFVNFVGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLY 532
+A VN VGNSL+SMYAR GRME+A +AFD L+EKN+VS NAI DG AKN E+A +
Sbjct: 416 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 475
Query: 533 QIQSMDMGANAFT 571
+I +G +AFT
Sbjct: 476 EIADTGIGISAFT 488
Score = 110 bits (276), Expect = 2e-22
Identities = 70/193 (36%), Positives = 115/193 (59%), Gaps = 6/193 (3%)
Frame = +2
Query: 11 GRSMHSQAIRLG-LAHDACVGCTLVDMYAKCSL-MDDSRKVFDRMDEHSVMSWTTIISGY 184
G ++ ++ G L D CVGC L+DM+ K S + + KVFD+M E ++++WT +I+ +
Sbjct: 196 GEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRF 255
Query: 185 AQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFV 364
AQ + AI+LF++M P+ FTYSS+L AC L +G+Q+H+RVI+ GLA
Sbjct: 256 AQLGCARD-AIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALD 314
Query: 365 NFVGNSLVSMYARF---GRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYE-QAIEVLY 532
VG SLV MYA+ G ++++ + F+ + E NV+S AI ++ + +AIE+
Sbjct: 315 VCVGCSLVDMYAKCAADGSVDDSRKVFERMPEHNVMSWTAIITAYVQSGECDKEAIELFC 374
Query: 533 QIQSMDMGANAFT 571
++ S + N F+
Sbjct: 375 KMISGHIWPNHFS 387
Score = 86.7 bits (213), Expect = 4e-15
Identities = 49/173 (28%), Positives = 103/173 (59%), Gaps = 8/173 (4%)
Frame = +2
Query: 5 EFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRM-DEHSVMSWTTIISG 181
+ G+ +H + ++ GL D+ V TL+ +Y+KC + +R +F+ M ++ ++SW+ ++S
Sbjct: 92 QLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSC 151
Query: 182 YAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAF 361
+A +SM + +AI F++M+ PN + ++++++AC+N + VG+ I+ V+K+G
Sbjct: 152 FANNSM-ELQAIWTFLDMLELGFYPNEYCFAAVIRACSNANHAWVGEIIYGFVVKTGYLE 210
Query: 362 VNF-VGNSLVSMYAR-FGRMEEAIRAFDSLYEKNVVSCNAIAD-----GCAKN 499
+ VG L+ M+ + G + A + FD + E+N+V+ + GCA++
Sbjct: 211 ADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARD 263
>gb|EMJ18239.1| hypothetical protein PRUPE_ppa001611mg [Prunus persica]
Length = 793
Score = 225 bits (574), Expect = 5e-57
Identities = 111/193 (57%), Positives = 144/193 (74%), Gaps = 3/193 (1%)
Frame = +2
Query: 2 LEFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSL---MDDSRKVFDRMDEHSVMSWTTI 172
L G+ +HS IR GLA CVGC LVDMYAKC+ MDD+RKVFDRM H+V+SWT+I
Sbjct: 231 LSLGQQLHSWVIRSGLALGHCVGCCLVDMYAKCAADGSMDDARKVFDRMPNHNVLSWTSI 290
Query: 173 ISGYAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSG 352
I+GY QS DE+AI+LF+ M+ G V PNHFT+SSILKACANL+D + G Q+H+ +K G
Sbjct: 291 INGYVQSGEGDEEAIKLFVGMMTGHVPPNHFTFSSILKACANLSDLRKGDQVHSLAVKLG 350
Query: 353 LAFVNFVGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLY 532
LA VN VGNSL+SMY+R G++E+A +AFD LYEKN++S N I D AK+ + E+A + +
Sbjct: 351 LASVNCVGNSLISMYSRSGQVEDARKAFDILYEKNLISYNTIVDAYAKHSDTEEAFGIFH 410
Query: 533 QIQSMDMGANAFT 571
+IQ GA+AFT
Sbjct: 411 EIQDTGFGASAFT 423
Score = 119 bits (298), Expect = 5e-25
Identities = 72/196 (36%), Positives = 115/196 (58%), Gaps = 6/196 (3%)
Frame = +2
Query: 2 LEFGRSMHSQAIRLG-LAHDACVGCTLVDMYAKCS-LMDDSRKVFDRMDEHSVMSWTTII 175
+ G + I+ G L D CVGC+L+DM+AK S +DD+ KVF+ M E ++WT +I
Sbjct: 128 IRIGNIIFGSVIKSGYLGSDVCVGCSLIDMFAKGSGELDDAYKVFETMPETDAVTWTLMI 187
Query: 176 SGYAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGL 355
+ AQ E AI+L+++M+ + P+ FT S ++ AC L +GQQ+H+ VI+SGL
Sbjct: 188 TRLAQMGCPGE-AIDLYVDMLWSGLMPDQFTLSGVISACTKLDSLSLGQQLHSWVIRSGL 246
Query: 356 AFVNFVGNSLVSMYARF---GRMEEAIRAFDSLYEKNVVSCNAIADGCAKN-YNYEQAIE 523
A + VG LV MYA+ G M++A + FD + NV+S +I +G ++ E+AI+
Sbjct: 247 ALGHCVGCCLVDMYAKCAADGSMDDARKVFDRMPNHNVLSWTSIINGYVQSGEGDEEAIK 306
Query: 524 VLYQIQSMDMGANAFT 571
+ + + + N FT
Sbjct: 307 LFVGMMTGHVPPNHFT 322
Score = 118 bits (296), Expect = 9e-25
Identities = 66/190 (34%), Positives = 111/190 (58%)
Frame = +2
Query: 2 LEFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISG 181
L G +HS A++LGLA CVG +L+ MY++ ++D+RK FD + E +++S+ TI+
Sbjct: 336 LRKGDQVHSLAVKLGLASVNCVGNSLISMYSRSGQVEDARKAFDILYEKNLISYNTIVDA 395
Query: 182 YAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAF 361
YA+ S E+A +F + + + FT+SS+L A++ G+QIHAR+IKSG
Sbjct: 396 YAKHS-DTEEAFGIFHEIQDTGFGASAFTFSSLLSGAASICAVGKGEQIHARIIKSGFES 454
Query: 362 VNFVGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQIQ 541
+ N+LVSMY+R G ++ A F+ + + NV+S ++ G AK+ A+E+ ++
Sbjct: 455 NQGICNALVSMYSRCGNIDAAFAVFNEMEDWNVISWTSMITGFAKHGYAAAAVEMFNKML 514
Query: 542 SMDMGANAFT 571
+ N T
Sbjct: 515 EAGLKPNEIT 524
Score = 80.1 bits (196), Expect = 4e-13
Identities = 46/157 (29%), Positives = 93/157 (59%), Gaps = 3/157 (1%)
Frame = +2
Query: 5 EFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRM-DEHSVMSWTTIISG 181
+ GR +H++ + L D V +L+ +Y+K + +F+ M ++ +++SW+ ++S
Sbjct: 27 DLGRLVHARLVHSQLELDPVVLNSLISLYSKSRDWKKANSIFENMGNKRNLVSWSAMVSC 86
Query: 182 YAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSG-LA 358
+A + M E AI F++M+ PN + ++S+++AC+N + ++G I VIKSG L
Sbjct: 87 FANNDMGLE-AILTFLDMLEDGFYPNEYCFASVIRACSNAQNIRIGNIIFGSVIKSGYLG 145
Query: 359 FVNFVGNSLVSMYAR-FGRMEEAIRAFDSLYEKNVVS 466
VG SL+ M+A+ G +++A + F+++ E + V+
Sbjct: 146 SDVCVGCSLIDMFAKGSGELDDAYKVFETMPETDAVT 182
Score = 72.8 bits (177), Expect = 6e-11
Identities = 42/146 (28%), Positives = 79/146 (54%), Gaps = 1/146 (0%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G +H++ I+ G + + LV MY++C +D + VF+ M++ +V+SWT++I+G+A+
Sbjct: 440 GEQIHARIIKSGFESNQGICNALVSMYSRCGNIDAAFAVFNEMEDWNVISWTSMITGFAK 499
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVG-QQIHARVIKSGLAFVN 367
+ A+E+F M+ ++PN TY ++L AC++ G + A K G+
Sbjct: 500 HG-YAAAAVEMFNKMLEAGLKPNEITYIAVLSACSHAGLVAEGWKHFKAMQKKHGIIPRM 558
Query: 368 FVGNSLVSMYARFGRMEEAIRAFDSL 445
+V + R G + EAI +S+
Sbjct: 559 EHYACMVDLLGRSGSLVEAIEFINSM 584
>gb|EOY23498.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 860
Score = 223 bits (568), Expect = 3e-56
Identities = 107/193 (55%), Positives = 141/193 (73%), Gaps = 3/193 (1%)
Frame = +2
Query: 2 LEFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSL---MDDSRKVFDRMDEHSVMSWTTI 172
L G+ +HS IR G A D C+GC+LVDMYAKC++ +DDSRKVF RM+EH+VMSWT I
Sbjct: 298 LSLGKQLHSWVIRSGFALDVCIGCSLVDMYAKCTVGGSLDDSRKVFGRMEEHNVMSWTAI 357
Query: 173 ISGYAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSG 352
I+GY Q D++A+ELF M+ G V+PNHFT+SS+LKAC NL+DS G+Q +A +K G
Sbjct: 358 ITGYVQCGGRDKEALELFSKMMGGPVQPNHFTFSSVLKACGNLSDSCTGEQFYAHAVKHG 417
Query: 353 LAFVNFVGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLY 532
A + VGNSL+SMYAR GRM+ A +AF+SL+EKN+VS N I D CAKN + E A E+ +
Sbjct: 418 FASDDCVGNSLISMYARSGRMDNAQKAFESLFEKNLVSYNTIVDACAKNLDSEGAFELFH 477
Query: 533 QIQSMDMGANAFT 571
++ + NAFT
Sbjct: 478 ELTDSKIELNAFT 490
Score = 122 bits (305), Expect = 8e-26
Identities = 62/187 (33%), Positives = 112/187 (59%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G ++ A++ G A D CVG +L+ MYA+ MD+++K F+ + E +++S+ TI+ A+
Sbjct: 406 GEQFYAHAVKHGFASDDCVGNSLISMYARSGRMDNAQKAFESLFEKNLVSYNTIVDACAK 465
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNF 370
+ + E A ELF + + + N FT++S+L +++ G+QIHARV+KSG
Sbjct: 466 N-LDSEGAFELFHELTDSKIELNAFTFASLLSGASSVGAIGKGEQIHARVLKSGYQSNQC 524
Query: 371 VGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQIQSMD 550
+ N+L+SMYAR G +E A F+ + ++NV+S ++ G AK+ +A+E+ +++
Sbjct: 525 ICNALISMYARCGHIEAAFLVFNEMGDRNVISWTSMITGFAKHGFATRALEIFHEMLEAG 584
Query: 551 MGANAFT 571
+ N T
Sbjct: 585 IRPNEIT 591
Score = 97.1 bits (240), Expect = 3e-18
Identities = 63/182 (34%), Positives = 102/182 (56%), Gaps = 7/182 (3%)
Frame = +2
Query: 47 LAHDACVGCTLVDMYAKC-SLMDDSRKVFDRMDEHSVMSWTTIISGYAQSSMHDEKAIEL 223
L D VGC L+DM+ K S + + KVFD+M +V++WT +I+ Q + AI+L
Sbjct: 209 LESDTNVGCALIDMFVKGNSDLASAFKVFDKMPAKNVVAWTLMITRCTQLG-YPRDAIDL 267
Query: 224 FINMINGSVRPNHFTYSSILKACANLADS--QVGQQIHARVIKSGLAFVNFVGNSLVSMY 397
F++M+ G P+ FT S I+ AC L +G+Q+H+ VI+SG A +G SLV MY
Sbjct: 268 FLDMVLGGYVPDRFTLSGIISACTELESESLSLGKQLHSWVIRSGFALDVCIGCSLVDMY 327
Query: 398 ARF---GRMEEAIRAFDSLYEKNVVSCNAIADGCAK-NYNYEQAIEVLYQIQSMDMGANA 565
A+ G ++++ + F + E NV+S AI G + ++A+E+ ++ + N
Sbjct: 328 AKCTVGGSLDDSRKVFGRMEEHNVMSWTAIITGYVQCGGRDKEALELFSKMMGGPVQPNH 387
Query: 566 FT 571
FT
Sbjct: 388 FT 389
Score = 81.6 bits (200), Expect = 1e-13
Identities = 42/146 (28%), Positives = 83/146 (56%), Gaps = 1/146 (0%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G +H++ ++ G + C+ L+ MYA+C ++ + VF+ M + +V+SWT++I+G+A+
Sbjct: 507 GEQIHARVLKSGYQSNQCICNALISMYARCGHIEAAFLVFNEMGDRNVISWTSMITGFAK 566
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQI-HARVIKSGLAFVN 367
+A+E+F M+ +RPN TY+++L AC++ G +I ++ I+ GL
Sbjct: 567 HGFAT-RALEIFHEMLEAGIRPNEITYTAVLSACSHAGLISEGWEIFNSMPIEHGLVPGM 625
Query: 368 FVGNSLVSMYARFGRMEEAIRAFDSL 445
+V + R G + EAI +++
Sbjct: 626 EHYACMVDLLGRSGSLREAIELINTM 651
Score = 74.7 bits (182), Expect = 2e-11
Identities = 45/167 (26%), Positives = 91/167 (54%), Gaps = 3/167 (1%)
Frame = +2
Query: 5 EFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRM-DEHSVMSWTTIISG 181
+ G+ +H+ + L D+ + +L+ +Y+K + K+F RM D+ ++SW+ +IS
Sbjct: 92 QLGKIVHTNLNQSKLELDSVLFNSLISLYSKSGDWARAHKIFQRMEDKRDLVSWSAMISC 151
Query: 182 YAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSG-LA 358
+A + M + KAI F++M+ PN + ++++++AC+ +G+ I ++KSG L
Sbjct: 152 FANNKM-EFKAILTFLDMLENGFYPNEYCFTAVVRACSKAEFFSIGEIILGFLVKSGYLE 210
Query: 359 FVNFVGNSLVSMYARFGR-MEEAIRAFDSLYEKNVVSCNAIADGCAK 496
VG +L+ M+ + + A + FD + KNVV+ + C +
Sbjct: 211 SDTNVGCALIDMFVKGNSDLASAFKVFDKMPAKNVVAWTLMITRCTQ 257
>ref|XP_002522011.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538815|gb|EEF40415.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 585
Score = 223 bits (567), Expect = 4e-56
Identities = 109/193 (56%), Positives = 139/193 (72%), Gaps = 3/193 (1%)
Frame = +2
Query: 2 LEFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSL---MDDSRKVFDRMDEHSVMSWTTI 172
L G+ +HS AI+ GL +D CVGC+LVDMYAKC++ +DDSRKVFDRM H+VMSWT I
Sbjct: 296 LSLGKELHSWAIKSGLVYDVCVGCSLVDMYAKCAVDGSLDDSRKVFDRMTNHNVMSWTAI 355
Query: 173 ISGYAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSG 352
I+GY Q+ D +A ELF+ MI G V+PNHFT+SSILKACANL+D +G+Q +A +K G
Sbjct: 356 ITGYVQNGRSDMEATELFLEMIEGHVKPNHFTFSSILKACANLSDLHLGEQFYAHAVKLG 415
Query: 353 LAFVNFVGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLY 532
A VN VGNSL+SMY+R ME A +AFD L+EKN+VS N I + AK N E+A E+
Sbjct: 416 FASVNCVGNSLISMYSRCDNMENARKAFDVLFEKNLVSYNTIVEAYAKGLNSEEAFELFN 475
Query: 533 QIQSMDMGANAFT 571
+I+ NAFT
Sbjct: 476 EIEDTGFVVNAFT 488
Score = 120 bits (301), Expect = 2e-25
Identities = 60/179 (33%), Positives = 111/179 (62%)
Frame = +2
Query: 2 LEFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISG 181
L G ++ A++LG A CVG +L+ MY++C M+++RK FD + E +++S+ TI+
Sbjct: 401 LHLGEQFYAHAVKLGFASVNCVGNSLISMYSRCDNMENARKAFDVLFEKNLVSYNTIVEA 460
Query: 182 YAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAF 361
YA+ ++ E+A ELF + + N FT++S+L +++ G+QIHAR++KS
Sbjct: 461 YAKG-LNSEEAFELFNEIEDTGFVVNAFTFASLLSGASSIGAIGKGEQIHARILKSDFKT 519
Query: 362 VNFVGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQI 538
+ N+L+SMY+R G +E A + F+ + ++NV+S ++ G AK+ +A+E +++
Sbjct: 520 NLHISNALISMYSRCGDIEAAFQVFNGMGDRNVISWTSMITGYAKHGFAVRALETFHKM 578
Score = 114 bits (286), Expect = 1e-23
Identities = 69/194 (35%), Positives = 112/194 (57%), Gaps = 6/194 (3%)
Frame = +2
Query: 8 FGRSMHSQAIRLG-LAHDACVGCTLVDMYAK-CSLMDDSRKVFDRMDEHSVMSWTTIISG 181
+G + I+ G L CVGC L+DMYAK C ++ + KVFD M E ++++WT +IS
Sbjct: 195 YGEIIFGSLIKCGYLNSHVCVGCALIDMYAKGCGDVEGACKVFDNMSERNIVTWTLMISR 254
Query: 182 YAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAF 361
+ Q + + AI+LF +MI P+++T S ++ ACA L +G+++H+ IKSGL +
Sbjct: 255 FQQLGYYRD-AIDLFNHMIFSGFMPDNYTLSGVVSACAELGLLSLGKELHSWAIKSGLVY 313
Query: 362 VNFVGNSLVSMYARF---GRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYE-QAIEVL 529
VG SLV MYA+ G ++++ + FD + NV+S AI G +N + +A E+
Sbjct: 314 DVCVGCSLVDMYAKCAVDGSLDDSRKVFDRMTNHNVMSWTAIITGYVQNGRSDMEATELF 373
Query: 530 YQIQSMDMGANAFT 571
++ + N FT
Sbjct: 374 LEMIEGHVKPNHFT 387
Score = 86.7 bits (213), Expect = 4e-15
Identities = 51/177 (28%), Positives = 103/177 (58%), Gaps = 5/177 (2%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRM-DEHSVMSWTTIISGYA 187
G+ +H+ + GL D+ + +L+ +Y+KC ++ + +F M ++ ++SW+ +IS YA
Sbjct: 94 GKLVHNCLTQSGLELDSVILNSLISLYSKCGELNSANDIFISMGNKRDLVSWSALISCYA 153
Query: 188 QSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVN 367
+ + + AI ++I+M+ PN + YS+++K+C+N + G+ I +IK G ++N
Sbjct: 154 TNGLEFD-AIRVYIDMLVSGFFPNEYCYSAVIKSCSNRENFSYGEIIFGSLIKCG--YLN 210
Query: 368 ---FVGNSLVSMYAR-FGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEV 526
VG +L+ MYA+ G +E A + FD++ E+N+V+ + + Y AI++
Sbjct: 211 SHVCVGCALIDMYAKGCGDVEGACKVFDNMSERNIVTWTLMISRFQQLGYYRDAIDL 267
>ref|XP_002321443.2| hypothetical protein POPTR_0015s02060g [Populus trichocarpa]
gi|550321785|gb|EEF05570.2| hypothetical protein
POPTR_0015s02060g [Populus trichocarpa]
Length = 931
Score = 219 bits (558), Expect = 4e-55
Identities = 108/193 (55%), Positives = 139/193 (72%), Gaps = 3/193 (1%)
Frame = +2
Query: 2 LEFGRSMHSQAIRLGLAHDACVGCTLVDMYAKC---SLMDDSRKVFDRMDEHSVMSWTTI 172
L GR H ++ GL D CVGC+LVDMYAKC +DD+RKVFDRM H+VMSWT I
Sbjct: 369 LSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAI 428
Query: 173 ISGYAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSG 352
I+GY QS D +AIELF+ M+ G V+PNHFT+SS+LKACANL+D +G+Q++A V+K
Sbjct: 429 ITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMR 488
Query: 353 LAFVNFVGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLY 532
LA +N VGNSL+SMY+R G ME A +AFD L+EKN+VS N I + AK+ N E+A E+
Sbjct: 489 LASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFN 548
Query: 533 QIQSMDMGANAFT 571
+I+ G NAFT
Sbjct: 549 EIEGAGTGVNAFT 561
Score = 119 bits (299), Expect = 4e-25
Identities = 60/187 (32%), Positives = 114/187 (60%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G +++ +++ LA CVG +L+ MY++C M+++RK FD + E +++S+ TI++ YA+
Sbjct: 477 GEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAK 536
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNF 370
S ++ E+A ELF + N FT++S+L +++ G+QIH+R++KSG
Sbjct: 537 S-LNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLH 595
Query: 371 VGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQIQSMD 550
+ N+L+SMY+R G +E A + F+ + + NV+S ++ G AK+ +A+E +++
Sbjct: 596 ICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAG 655
Query: 551 MGANAFT 571
+ N T
Sbjct: 656 VSPNEVT 662
Score = 107 bits (267), Expect = 2e-21
Identities = 63/177 (35%), Positives = 104/177 (58%), Gaps = 5/177 (2%)
Frame = +2
Query: 56 DACVGCTLVDMYAKCSL-MDDSRKVFDRMDEHSVMSWTTIISGYAQSSMHDEKAIELFIN 232
D CVGC L+DM+ K + ++ + KVFDRM + +V++WT +I+ + Q + A++LF++
Sbjct: 285 DVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRD-AVDLFLD 343
Query: 233 MINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNFVGNSLVSMYARF-- 406
M+ P+ FT S ++ ACA + +G+Q H V+KSGL VG SLV MYA+
Sbjct: 344 MVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVA 403
Query: 407 -GRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYE-QAIEVLYQIQSMDMGANAFT 571
G +++A + FD + NV+S AI G ++ + +AIE+ ++ + N FT
Sbjct: 404 DGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFT 460
Score = 77.0 bits (188), Expect = 3e-12
Identities = 43/157 (27%), Positives = 89/157 (56%), Gaps = 3/157 (1%)
Frame = +2
Query: 5 EFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRM-DEHSVMSWTTIISG 181
+ G +H + + GL D+ + +L+ +Y+KC + ++F+ M ++ ++SW+ +IS
Sbjct: 165 QLGHLVHHRLTQSGLELDSVILNSLISLYSKCGDWQQAHEIFESMGNKRDLVSWSALISC 224
Query: 182 YAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAF 361
YA + E AI F +M+ PN + ++ + +AC+N + +G+ I ++K+G
Sbjct: 225 YANNEKAFE-AISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIFGFLLKTGYFE 283
Query: 362 VNF-VGNSLVSMYAR-FGRMEEAIRAFDSLYEKNVVS 466
+ VG +L+ M+ + G +E A + FD + ++NVV+
Sbjct: 284 SDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVT 320
Score = 72.8 bits (177), Expect = 6e-11
Identities = 47/189 (24%), Positives = 97/189 (51%), Gaps = 6/189 (3%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G +HS+ ++ G + + L+ MY++C ++ + +VF+ M + +V+SWT++I+G+A+
Sbjct: 578 GEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAK 637
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNF 370
+A+E F M+ V PN TY ++L AC+++ G + H + +K V
Sbjct: 638 HGFAT-RALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLK-HFKSMKVEHGIVPR 695
Query: 371 VGN--SLVSMYARFGRMEEAIRAFDSL-YEKNVVSCNAIADGCAKNYNYE---QAIEVLY 532
+ + +V + R G +EEA+ +S+ ++ + + C + N + A E++
Sbjct: 696 MEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAEIIL 755
Query: 533 QIQSMDMGA 559
+ D A
Sbjct: 756 EQDPHDPAA 764
Score = 61.2 bits (147), Expect = 2e-07
Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Frame = +2
Query: 122 KVFDRMDEHSVMSWTTIISGYAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANL 301
K F + D +S ++G Q ++KAI M P+ TYS +LK+C
Sbjct: 104 KYFTKADIYSFGMLLMEMAG--QRKRLNKKAISTLDQMSLQGTHPDLITYSLLLKSCIRS 161
Query: 302 ADSQVGQQIHARVIKSGLAFVNFVGNSLVSMYARFGRMEEAIRAFDSLYEK-NVVSCNAI 478
+ Q+G +H R+ +SGL + + NSL+S+Y++ G ++A F+S+ K ++VS +A+
Sbjct: 162 HNYQLGHLVHHRLTQSGLELDSVILNSLISLYSKCGDWQQAHEIFESMGNKRDLVSWSAL 221
Query: 479 ADGCAKNYNYEQAIEVLYQI 538
A N +AI + +
Sbjct: 222 ISCYANNEKAFEAISAFFDM 241
>ref|XP_004306045.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 844
Score = 219 bits (558), Expect = 4e-55
Identities = 112/194 (57%), Positives = 143/194 (73%), Gaps = 4/194 (2%)
Frame = +2
Query: 2 LEFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCS---LMDDSRKVFDRMDEHSVMSWTTI 172
L G+ +HS A R L D CVGC LVDMYAKC M DSRKVFDRM EHSV+SWT +
Sbjct: 281 LALGKQLHSWAERSRLVLDHCVGCCLVDMYAKCGGDGSMSDSRKVFDRMREHSVVSWTAV 340
Query: 173 ISGYAQSSMHDEKAIELFINMINGS-VRPNHFTYSSILKACANLADSQVGQQIHARVIKS 349
I+GY QS DE+A+ELF+ MI+G V PNHFT++SILKACANL+D G Q+H+ +K
Sbjct: 341 ITGYVQSGGGDEEAVELFVKMISGGHVSPNHFTFASILKACANLSDRHKGGQVHSLAVKL 400
Query: 350 GLAFVNFVGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVL 529
GLA VN VGNSL+SMYAR G +++A +AFD LYEKN++S NAI D AK+ + E A +L
Sbjct: 401 GLASVNCVGNSLISMYARSGHVDDARKAFDVLYEKNLISYNAIVDAYAKHLDTEGAFGLL 460
Query: 530 YQIQSMDMGANAFT 571
++I++ +GA+AFT
Sbjct: 461 HEIENTGLGASAFT 474
Score = 116 bits (291), Expect = 4e-24
Identities = 65/187 (34%), Positives = 108/187 (57%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G +HS A++LGLA CVG +L+ MYA+ +DD+RK FD + E +++S+ I+ YA+
Sbjct: 390 GGQVHSLAVKLGLASVNCVGNSLISMYARSGHVDDARKAFDVLYEKNLISYNAIVDAYAK 449
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNF 370
+ E A L + N + + FT++S+L A+L G+QIH+R+IKSG
Sbjct: 450 H-LDTEGAFGLLHEIENTGLGASAFTFASLLSGAASLCAVDKGEQIHSRIIKSGFESNQS 508
Query: 371 VGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQIQSMD 550
+ N+LVSMY+R G + A + F+ + + NV+S ++ G AK+ +A+ + Q+
Sbjct: 509 ICNALVSMYSRCGNINAAFQVFNKMEDWNVISWTSMITGFAKHGYAARAVGLFDQMLEAG 568
Query: 551 MGANAFT 571
+ N T
Sbjct: 569 LKPNEIT 575
Score = 105 bits (261), Expect = 1e-20
Identities = 64/194 (32%), Positives = 110/194 (56%), Gaps = 7/194 (3%)
Frame = +2
Query: 11 GRSMHSQAIRLG-LAHDACVGCTLVDMYAKCS-LMDDSRKVFDRMDEHSVMSWTTIISGY 184
GR + ++ G L D C+G +L+DM+AK S + D+ KVF++M E ++W+ +I+ +
Sbjct: 181 GRVVFGMVVKTGYLESDVCIGSSLIDMFAKGSGELGDAYKVFEKMAETDAVTWSLMITRF 240
Query: 185 AQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFV 364
Q + KA+ELF+ M++ + P+ FT S ++ AC L +G+Q+H+ +S L
Sbjct: 241 VQMG-YPRKAVELFMEMLSNGLMPDQFTLSGVVSACTKLGSLALGKQLHSWAERSRLVLD 299
Query: 365 NFVGNSLVSMYARF---GRMEEAIRAFDSLYEKNVVSCNAIADGCAKN-YNYEQAIEVLY 532
+ VG LV MYA+ G M ++ + FD + E +VVS A+ G ++ E+A+E+
Sbjct: 300 HCVGCCLVDMYAKCGGDGSMSDSRKVFDRMREHSVVSWTAVITGYVQSGGGDEEAVELFV 359
Query: 533 Q-IQSMDMGANAFT 571
+ I + N FT
Sbjct: 360 KMISGGHVSPNHFT 373
Score = 77.0 bits (188), Expect = 3e-12
Identities = 47/187 (25%), Positives = 103/187 (55%), Gaps = 3/187 (1%)
Frame = +2
Query: 20 MHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMD-EHSVMSWTTIISGYAQSS 196
+H+ R L D+ + +L+ +Y+K + +R +F M + +++SW+ ++S +A +
Sbjct: 82 VHAHLSRSHLRPDSLILNSLISVYSKSGDFETARSIFQTMGPKRNLVSWSAMVSCFANND 141
Query: 197 MHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSG-LAFVNFV 373
+ E AI +F++MI N F Y+S+++AC+N +G+ + V+K+G L +
Sbjct: 142 IPLE-AISMFVDMIEEGYNANEFCYASVIRACSNPELVGIGRVVFGMVVKTGYLESDVCI 200
Query: 374 GNSLVSMYAR-FGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQIQSMD 550
G+SL+ M+A+ G + +A + F+ + E + V+ + + + +A+E+ ++ S
Sbjct: 201 GSSLIDMFAKGSGELGDAYKVFEKMAETDAVTWSLMITRFVQMGYPRKAVELFMEMLSNG 260
Query: 551 MGANAFT 571
+ + FT
Sbjct: 261 LMPDQFT 267
Score = 73.2 bits (178), Expect = 4e-11
Identities = 44/170 (25%), Positives = 91/170 (53%), Gaps = 3/170 (1%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G +HS+ I+ G + + LV MY++C ++ + +VF++M++ +V+SWT++I+G+A+
Sbjct: 491 GEQIHSRIIKSGFESNQSICNALVSMYSRCGNINAAFQVFNKMEDWNVISWTSMITGFAK 550
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNF 370
+ +A+ LF M+ ++PN TY ++L AC++ G + H + + V
Sbjct: 551 HG-YAARAVGLFDQMLEAGLKPNEITYIAVLSACSHAGLISEGWK-HFKEMHQQHGIVPR 608
Query: 371 VGN--SLVSMYARFGRMEEAIRAFDSL-YEKNVVSCNAIADGCAKNYNYE 511
+ + +V + R G + EAI +S+ +E + + C + + E
Sbjct: 609 MEHYACMVDLLGRSGSLVEAIEFINSMPFEADALIWRTFLGACRVHCDVE 658
>ref|XP_004231236.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Solanum lycopersicum]
Length = 844
Score = 211 bits (537), Expect = 1e-52
Identities = 104/190 (54%), Positives = 141/190 (74%), Gaps = 3/190 (1%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSL---MDDSRKVFDRMDEHSVMSWTTIISG 181
GR +H I+ L+ D CVGC+LVDMYAK ++ MDDSRKVFDRM +H+VMSWT II+G
Sbjct: 286 GRQLHGGVIKSRLSADVCVGCSLVDMYAKSTMDGSMDDSRKVFDRMADHNVMSWTAIITG 345
Query: 182 YAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAF 361
Y Q +D +AI+L+ MI+G V+PNHFT+SS+LKAC NL++ +G+QI+ +K GLA
Sbjct: 346 YVQRGHYDMEAIKLYCRMIDGLVKPNHFTFSSLLKACGNLSNPAIGEQIYNHAVKLGLAS 405
Query: 362 VNFVGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQIQ 541
VN V NSL+SMYA+ GRMEEA +AF+ L+EKN+ S N I DGC+K+ + +A E+ I
Sbjct: 406 VNCVANSLISMYAKSGRMEEARKAFELLFEKNLASYNIIVDGCSKSLDSAEAFELFSHID 465
Query: 542 SMDMGANAFT 571
S ++G +AFT
Sbjct: 466 S-EVGVDAFT 474
Score = 116 bits (291), Expect = 4e-24
Identities = 64/187 (34%), Positives = 114/187 (60%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G +++ A++LGLA CV +L+ MYAK M+++RK F+ + E ++ S+ I+ G ++
Sbjct: 391 GEQIYNHAVKLGLASVNCVANSLISMYAKSGRMEEARKAFELLFEKNLASYNIIVDGCSK 450
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNF 370
S + +A ELF + I+ V + FT++S+L A++ G+QIH+RV+K+G+
Sbjct: 451 S-LDSAEAFELFSH-IDSEVGVDAFTFASLLSGAASVGAVGKGEQIHSRVLKAGIQSSQS 508
Query: 371 VGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQIQSMD 550
V N+L+SMY+R G +E A + F+ + ++NV+S +I G AK+ +A+E+ Q+
Sbjct: 509 VCNALISMYSRCGNIEAAFQVFEGMEDRNVISWTSIITGFAKHGFAHRAVELFNQMLEDG 568
Query: 551 MGANAFT 571
+ N T
Sbjct: 569 IKPNEVT 575
Score = 114 bits (286), Expect = 1e-23
Identities = 67/179 (37%), Positives = 107/179 (59%), Gaps = 5/179 (2%)
Frame = +2
Query: 11 GRSMHSQAIRLG-LAHDACVGCTLVDMYAK-CSLMDDSRKVFDRMDEHSVMSWTTIISGY 184
G ++ AI+ G D CVGC L+D++AK S + ++KVFDRM E ++++WT +I+ +
Sbjct: 183 GLAIFGFAIKTGYFESDVCVGCALIDLFAKGFSDLRSAKKVFDRMPERNLVTWTLMITRF 242
Query: 185 AQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFV 364
+Q + A+ LF+ M++ P+ FT+S +L ACA S +G+Q+H VIKS L+
Sbjct: 243 SQLGASKD-AVRLFLEMVSEGFVPDRFTFSGVLSACAEPGLSALGRQLHGGVIKSRLSAD 301
Query: 365 NFVGNSLVSMYARF---GRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLY 532
VG SLV MYA+ G M+++ + FD + + NV+S AI G + +Y+ LY
Sbjct: 302 VCVGCSLVDMYAKSTMDGSMDDSRKVFDRMADHNVMSWTAIITGYVQRGHYDMEAIKLY 360
Score = 79.0 bits (193), Expect = 8e-13
Identities = 42/146 (28%), Positives = 82/146 (56%), Gaps = 1/146 (0%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G +HS+ ++ G+ V L+ MY++C ++ + +VF+ M++ +V+SWT+II+G+A+
Sbjct: 491 GEQIHSRVLKAGIQSSQSVCNALISMYSRCGNIEAAFQVFEGMEDRNVISWTSIITGFAK 550
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVG-QQIHARVIKSGLAFVN 367
+A+ELF M+ ++PN TY ++L AC+++ G + + I G+
Sbjct: 551 HGFA-HRAVELFNQMLEDGIKPNEVTYIAVLSACSHVGLVDEGWKYFDSMSIDHGITPRM 609
Query: 368 FVGNSLVSMYARFGRMEEAIRAFDSL 445
+V + R G +E+A++ SL
Sbjct: 610 EHYACMVDLLGRSGSLEKAVQFIKSL 635
Score = 72.0 bits (175), Expect = 1e-10
Identities = 49/192 (25%), Positives = 98/192 (51%), Gaps = 3/192 (1%)
Frame = +2
Query: 5 EFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDE-HSVMSWTTIISG 181
+ G+ +HS+ + D V +L+ +Y+K + + K+F+ M E ++SW+ +IS
Sbjct: 79 QIGQLLHSKLNDSPIQPDTIVLNSLISLYSKMGSWETAEKIFESMGEKRDLVSWSAMISC 138
Query: 182 YAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAF 361
YA M E ++ F +M+ PN F +S++++AC + VG I IK+G
Sbjct: 139 YAHCGMELE-SVFTFYDMVEFGEYPNQFCFSAVIQACCSAELGWVGLAIFGFAIKTGYFE 197
Query: 362 VNF-VGNSLVSMYAR-FGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQ 535
+ VG +L+ ++A+ F + A + FD + E+N+V+ + ++ + A+ + +
Sbjct: 198 SDVCVGCALIDLFAKGFSDLRSAKKVFDRMPERNLVTWTLMITRFSQLGASKDAVRLFLE 257
Query: 536 IQSMDMGANAFT 571
+ S + FT
Sbjct: 258 MVSEGFVPDRFT 269
>ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 206 bits (525), Expect = 3e-51
Identities = 101/193 (52%), Positives = 140/193 (72%), Gaps = 3/193 (1%)
Frame = +2
Query: 2 LEFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSL---MDDSRKVFDRMDEHSVMSWTTI 172
L G+ +HSQAIR GL D CVGC L++MYAKCS+ M +RK+FD++ +H+V SWT +
Sbjct: 287 LLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAM 346
Query: 173 ISGYAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSG 352
I+GY Q +DE+A++LF MI V PNHFT+SS LKACANLA ++G+Q+ +K G
Sbjct: 347 ITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLG 406
Query: 353 LAFVNFVGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLY 532
+ VN V NSL+SMYAR GR+++A +AFD L+EKN++S N + D AKN N E+A+E+
Sbjct: 407 FSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFN 466
Query: 533 QIQSMDMGANAFT 571
+I+ MGA+AFT
Sbjct: 467 EIEDQGMGASAFT 479
Score = 130 bits (327), Expect = 2e-28
Identities = 68/190 (35%), Positives = 118/190 (62%)
Frame = +2
Query: 2 LEFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISG 181
L G + + A++LG + CV +L+ MYA+ +DD+RK FD + E +++S+ T+I
Sbjct: 392 LRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDA 451
Query: 182 YAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAF 361
YA++ ++ E+A+ELF + + + + FT++S+L A++ G+QIHARVIKSGL
Sbjct: 452 YAKN-LNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKL 510
Query: 362 VNFVGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQIQ 541
V N+L+SMY+R G +E A + F+ + ++NV+S +I G AK+ QA+E+ +++
Sbjct: 511 NQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKML 570
Query: 542 SMDMGANAFT 571
+ N T
Sbjct: 571 EEGVRPNEVT 580
Score = 103 bits (257), Expect = 3e-20
Identities = 67/193 (34%), Positives = 106/193 (54%), Gaps = 6/193 (3%)
Frame = +2
Query: 11 GRSMHSQAIRLG-LAHDACVGCTLVDMYAKC-SLMDDSRKVFDRMDEHSVMSWTTIISGY 184
G S+ I+ G L D CVGC L+DM+ K + + KVF++M E + ++WT +I+
Sbjct: 187 GDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRL 246
Query: 185 AQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFV 364
Q E AI+LF++MI P+ FT S ++ ACAN+ +GQQ+H++ I+ GL
Sbjct: 247 MQFGYAGE-AIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLD 305
Query: 365 NFVGNSLVSMYARF---GRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNY-EQAIEVLY 532
VG L++MYA+ G M A + FD + + NV S A+ G + Y E+A+++
Sbjct: 306 RCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFR 365
Query: 533 QIQSMDMGANAFT 571
+ + N FT
Sbjct: 366 GMILTHVIPNHFT 378
Score = 80.1 bits (196), Expect = 4e-13
Identities = 48/169 (28%), Positives = 91/169 (53%), Gaps = 2/169 (1%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G +H++ I+ GL + V L+ MY++C ++ + +VF+ M++ +V+SWT+II+G+A+
Sbjct: 496 GEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAK 555
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVG-QQIHARVIKSGLAFVN 367
+ A+ELF M+ VRPN TY ++L AC+++ G + + + G+
Sbjct: 556 HGFATQ-ALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRM 614
Query: 368 FVGNSLVSMYARFGRMEEAIRAFDSL-YEKNVVSCNAIADGCAKNYNYE 511
+V + R G + EAI+ +S+ Y+ + + C + N E
Sbjct: 615 EHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLE 663
Score = 66.6 bits (161), Expect = 4e-09
Identities = 41/157 (26%), Positives = 81/157 (51%), Gaps = 3/157 (1%)
Frame = +2
Query: 5 EFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRM-DEHSVMSWTTIISG 181
+ G +H + + L D+ +L+ +Y+KC + + +F M ++SW+ ++S
Sbjct: 83 DIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSC 142
Query: 182 YAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSG-LA 358
+A ++M +A+ F++MI PN + +++ +AC+ VG I VIK+G L
Sbjct: 143 FANNNM-GFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQ 201
Query: 359 FVNFVGNSLVSMYAR-FGRMEEAIRAFDSLYEKNVVS 466
VG L+ M+ + G + A + F+ + E+N V+
Sbjct: 202 SDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVT 238
>ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 206 bits (525), Expect = 3e-51
Identities = 101/193 (52%), Positives = 140/193 (72%), Gaps = 3/193 (1%)
Frame = +2
Query: 2 LEFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSL---MDDSRKVFDRMDEHSVMSWTTI 172
L G+ +HSQAIR GL D CVGC L++MYAKCS+ M +RK+FD++ +H+V SWT +
Sbjct: 287 LLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAM 346
Query: 173 ISGYAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSG 352
I+GY Q +DE+A++LF MI V PNHFT+SS LKACANLA ++G+Q+ +K G
Sbjct: 347 ITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLG 406
Query: 353 LAFVNFVGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLY 532
+ VN V NSL+SMYAR GR+++A +AFD L+EKN++S N + D AKN N E+A+E+
Sbjct: 407 FSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFN 466
Query: 533 QIQSMDMGANAFT 571
+I+ MGA+AFT
Sbjct: 467 EIEDQGMGASAFT 479
Score = 130 bits (327), Expect = 2e-28
Identities = 68/190 (35%), Positives = 118/190 (62%)
Frame = +2
Query: 2 LEFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISG 181
L G + + A++LG + CV +L+ MYA+ +DD+RK FD + E +++S+ T+I
Sbjct: 392 LRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDA 451
Query: 182 YAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAF 361
YA++ ++ E+A+ELF + + + + FT++S+L A++ G+QIHARVIKSGL
Sbjct: 452 YAKN-LNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKL 510
Query: 362 VNFVGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQIQ 541
V N+L+SMY+R G +E A + F+ + ++NV+S +I G AK+ QA+E+ +++
Sbjct: 511 NQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKML 570
Query: 542 SMDMGANAFT 571
+ N T
Sbjct: 571 EEGVRPNLVT 580
Score = 102 bits (255), Expect = 5e-20
Identities = 66/193 (34%), Positives = 105/193 (54%), Gaps = 6/193 (3%)
Frame = +2
Query: 11 GRSMHSQAIRLG-LAHDACVGCTLVDMYAKC-SLMDDSRKVFDRMDEHSVMSWTTIISGY 184
G S+ ++ G L D CVGC L+DM+ K + + KVF++M E + ++WT +I+
Sbjct: 187 GDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRL 246
Query: 185 AQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFV 364
Q E AI+LF+ MI P+ FT S ++ ACAN+ +GQQ+H++ I+ GL
Sbjct: 247 MQFGYAGE-AIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLD 305
Query: 365 NFVGNSLVSMYARF---GRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNY-EQAIEVLY 532
VG L++MYA+ G M A + FD + + NV S A+ G + Y E+A+++
Sbjct: 306 RCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFR 365
Query: 533 QIQSMDMGANAFT 571
+ + N FT
Sbjct: 366 GMILTHVIPNHFT 378
Score = 79.0 bits (193), Expect = 8e-13
Identities = 48/169 (28%), Positives = 91/169 (53%), Gaps = 2/169 (1%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G +H++ I+ GL + V L+ MY++C ++ + +VF+ M++ +V+SWT+II+G+A+
Sbjct: 496 GEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAK 555
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVG-QQIHARVIKSGLAFVN 367
+ A+ELF M+ VRPN TY ++L AC+++ G + + + G+
Sbjct: 556 HGFATQ-ALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRM 614
Query: 368 FVGNSLVSMYARFGRMEEAIRAFDSL-YEKNVVSCNAIADGCAKNYNYE 511
+V + R G + EAI+ +S+ Y+ + + C + N E
Sbjct: 615 EHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLE 663
Score = 67.0 bits (162), Expect = 3e-09
Identities = 40/157 (25%), Positives = 81/157 (51%), Gaps = 3/157 (1%)
Frame = +2
Query: 5 EFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRM-DEHSVMSWTTIISG 181
+ G +H + + L D+ +L+ +Y+KC + + +F M ++SW+ ++S
Sbjct: 83 DIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSC 142
Query: 182 YAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSG-LA 358
+A ++M +A+ F++MI PN + +++ +AC+ VG I V+K+G L
Sbjct: 143 FANNNM-GFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQ 201
Query: 359 FVNFVGNSLVSMYAR-FGRMEEAIRAFDSLYEKNVVS 466
VG L+ M+ + G + A + F+ + E+N V+
Sbjct: 202 SDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVT 238
>gb|EXC74714.1| hypothetical protein L484_000366 [Morus notabilis]
Length = 841
Score = 203 bits (517), Expect = 2e-50
Identities = 98/193 (50%), Positives = 140/193 (72%), Gaps = 3/193 (1%)
Frame = +2
Query: 2 LEFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSL---MDDSRKVFDRMDEHSVMSWTTI 172
L FG+ +HSQ IR GLA + VGC LVD+YAKC+ MD+SRKVFD M H+V SWT +
Sbjct: 279 LSFGKQLHSQVIRRGLAFNHYVGCCLVDLYAKCAADGSMDESRKVFDHMTNHNVTSWTAL 338
Query: 173 ISGYAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSG 352
I+GY ++ +AI+LF MI+G VRPNHFT+SSILKA A+L+D G+Q+H+ +K G
Sbjct: 339 ITGYVRNGGRYHEAIKLFCEMISGHVRPNHFTFSSILKASASLSDLSTGKQVHSLAVKLG 398
Query: 353 LAFVNFVGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLY 532
LA N VGNSL+SMYA+ +ME + +AFD+L++KN++S N I D K++ ++A ++ +
Sbjct: 399 LASDNCVGNSLISMYAQSRQMEYSRKAFDNLFDKNLISYNTIVDAYVKSFESKEAFDLFH 458
Query: 533 QIQSMDMGANAFT 571
+I ++ GANA+T
Sbjct: 459 EIDDVEFGANAYT 471
Score = 130 bits (327), Expect = 2e-28
Identities = 67/190 (35%), Positives = 114/190 (60%)
Frame = +2
Query: 2 LEFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISG 181
L G+ +HS A++LGLA D CVG +L+ MYA+ M+ SRK FD + + +++S+ TI+
Sbjct: 384 LSTGKQVHSLAVKLGLASDNCVGNSLISMYAQSRQMEYSRKAFDNLFDKNLISYNTIVDA 443
Query: 182 YAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAF 361
Y +S ++A +LF + + N +T+SS+L A++ G+QIHAR +KSG
Sbjct: 444 YVKS-FESKEAFDLFHEIDDVEFGANAYTFSSLLSGAASIGAIGKGEQIHARTLKSGFDS 502
Query: 362 VNFVGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQIQ 541
+ N+LVSMY+R G +E A + F + ++N++S +I G +K+ E+A+ + Y++
Sbjct: 503 NQCISNALVSMYSRCGNVEAAFQVFSEMVDRNIISWTSIITGFSKHGYAERALTMFYEML 562
Query: 542 SMDMGANAFT 571
+ N T
Sbjct: 563 ESGIRPNEVT 572
Score = 126 bits (316), Expect = 4e-27
Identities = 73/196 (37%), Positives = 120/196 (61%), Gaps = 6/196 (3%)
Frame = +2
Query: 2 LEFGRSMHSQAIRLG-LAHDACVGCTLVDMYAKCSL-MDDSRKVFDRMDEHSVMSWTTII 175
L G ++ I+ G D CVGC+L+DM+AK ++ + KVFD+M E +V++WT +I
Sbjct: 176 LSIGETIFGFVIKSGYFKADLCVGCSLIDMFAKGGGDLNSAYKVFDKMPEKNVVTWTLMI 235
Query: 176 SGYAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGL 355
+ +AQ E A++LF++M+ + P+ FT+SS++ ACA L G+Q+H++VI+ GL
Sbjct: 236 TRFAQLGFARE-AVDLFLDMVLSDLVPDQFTFSSVMSACAELELLSFGKQLHSQVIRRGL 294
Query: 356 AFVNFVGNSLVSMYARF---GRMEEAIRAFDSLYEKNVVSCNAIADGCAKN-YNYEQAIE 523
AF ++VG LV +YA+ G M+E+ + FD + NV S A+ G +N Y +AI+
Sbjct: 295 AFNHYVGCCLVDLYAKCAADGSMDESRKVFDHMTNHNVTSWTALITGYVRNGGRYHEAIK 354
Query: 524 VLYQIQSMDMGANAFT 571
+ ++ S + N FT
Sbjct: 355 LFCEMISGHVRPNHFT 370
Score = 83.2 bits (204), Expect = 4e-14
Identities = 52/192 (27%), Positives = 104/192 (54%), Gaps = 3/192 (1%)
Frame = +2
Query: 5 EFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRM-DEHSVMSWTTIISG 181
E G+ +H+ + L D+ +L+ +Y+K + + +F M ++ +++SWT+I+S
Sbjct: 75 ELGKLVHAHLVNSKLDLDSLTLNSLISLYSKNGDWEKADSIFRSMGNKRNLVSWTSIVSC 134
Query: 182 YAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAF 361
+A + + E AI F++M+ P+ + ++++ +AC + D +G+ I VIKSG
Sbjct: 135 FANNDLGFE-AIVAFLDMLENGFWPDEYCFAAVFRACLDTGDLSIGETIFGFVIKSGYFK 193
Query: 362 VNF-VGNSLVSMYAR-FGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQ 535
+ VG SL+ M+A+ G + A + FD + EKNVV+ + A+ +A+++
Sbjct: 194 ADLCVGCSLIDMFAKGGGDLNSAYKVFDKMPEKNVVTWTLMITRFAQLGFAREAVDLFLD 253
Query: 536 IQSMDMGANAFT 571
+ D+ + FT
Sbjct: 254 MVLSDLVPDQFT 265
Score = 79.3 bits (194), Expect = 6e-13
Identities = 43/155 (27%), Positives = 82/155 (52%), Gaps = 3/155 (1%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G +H++ ++ G + C+ LV MY++C ++ + +VF M + +++SWT+II+G+++
Sbjct: 488 GEQIHARTLKSGFDSNQCISNALVSMYSRCGNVEAAFQVFSEMVDRNIISWTSIITGFSK 547
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNF 370
+ E+A+ +F M+ +RPN TY+++L AC+ HA ++ G N
Sbjct: 548 HG-YAERALTMFYEMLESGIRPNEVTYTAVLSACS-----------HAGLVSEGRKHFN- 594
Query: 371 VGNSLVSMYARFG---RMEEAIRAFDSLYEKNVVS 466
+MY++ G RME D L ++S
Sbjct: 595 ------TMYSKHGIVPRMEHYACMVDLLGRSGLLS 623
>ref|XP_006347856.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Solanum tuberosum]
Length = 849
Score = 203 bits (516), Expect = 3e-50
Identities = 101/190 (53%), Positives = 139/190 (73%), Gaps = 3/190 (1%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSL---MDDSRKVFDRMDEHSVMSWTTIISG 181
GR +H I+ L+ D CVGC+LVDMYAK ++ MDDSRKVFDRM +H+VMSWT II+G
Sbjct: 291 GRQLHGGVIKSRLSADVCVGCSLVDMYAKSTMDGSMDDSRKVFDRMADHNVMSWTAIITG 350
Query: 182 YAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAF 361
Y QS +D +AI+L+ MI+ V+PNHFT+SS+LKAC NL++ +G+QI+ +K GLA
Sbjct: 351 YVQSGHYDMEAIKLYCRMIDNPVKPNHFTFSSLLKACGNLSNPAIGEQIYNHAVKLGLAS 410
Query: 362 VNFVGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQIQ 541
VN V NSL+SMYA+ GRMEEA +AF+ L+EKN+VS N I DG +K+ + +A E+ +
Sbjct: 411 VNCVANSLISMYAKSGRMEEARKAFELLFEKNLVSYNIIVDGYSKSLDSAEAFELFSHLD 470
Query: 542 SMDMGANAFT 571
S ++ + FT
Sbjct: 471 S-EVEVDTFT 479
Score = 122 bits (307), Expect = 5e-26
Identities = 65/187 (34%), Positives = 116/187 (62%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G +++ A++LGLA CV +L+ MYAK M+++RK F+ + E +++S+ I+ GY++
Sbjct: 396 GEQIYNHAVKLGLASVNCVANSLISMYAKSGRMEEARKAFELLFEKNLVSYNIIVDGYSK 455
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNF 370
S + +A ELF ++ + V + FT++S+L A++ G+QIHARV+K+G+
Sbjct: 456 S-LDSAEAFELFSHL-DSEVEVDTFTFASLLSGAASVGAVGKGEQIHARVLKAGIQSNQS 513
Query: 371 VGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQIQSMD 550
V N+L+SMY+R G +E A + F+ + ++NV+S +I G AK+ +A+E+ Q+
Sbjct: 514 VSNALISMYSRCGNIEAAFQVFEGMEDRNVISWTSIITGFAKHGFAHRAVELFNQMLEDG 573
Query: 551 MGANAFT 571
+ N T
Sbjct: 574 IKPNEVT 580
Score = 114 bits (284), Expect = 2e-23
Identities = 66/177 (37%), Positives = 110/177 (62%), Gaps = 5/177 (2%)
Frame = +2
Query: 56 DACVGCTLVDMYAK-CSLMDDSRKVFDRMDEHSVMSWTTIISGYAQSSMHDEKAIELFIN 232
D CVGC L+D++AK S + ++KVFDRM E ++++WT +I+ ++Q + A+ LF+
Sbjct: 204 DICVGCALIDLFAKGFSDLRSAKKVFDRMPERNLVTWTLMITRFSQLGASKD-AVRLFLE 262
Query: 233 MINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNFVGNSLVSMYARF-- 406
M++ P+ FT+S +L ACA S +G+Q+H VIKS L+ VG SLV MYA+
Sbjct: 263 MVSEGFVPDRFTFSGVLSACAEPGLSLLGRQLHGGVIKSRLSADVCVGCSLVDMYAKSTM 322
Query: 407 -GRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYE-QAIEVLYQIQSMDMGANAFT 571
G M+++ + FD + + NV+S AI G ++ +Y+ +AI++ ++ + N FT
Sbjct: 323 DGSMDDSRKVFDRMADHNVMSWTAIITGYVQSGHYDMEAIKLYCRMIDNPVKPNHFT 379
Score = 79.3 bits (194), Expect = 6e-13
Identities = 41/146 (28%), Positives = 84/146 (57%), Gaps = 1/146 (0%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G +H++ ++ G+ + V L+ MY++C ++ + +VF+ M++ +V+SWT+II+G+A+
Sbjct: 496 GEQIHARVLKAGIQSNQSVSNALISMYSRCGNIEAAFQVFEGMEDRNVISWTSIITGFAK 555
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKS-GLAFVN 367
+A+ELF M+ ++PN TY ++L AC+++ G + + K+ G+
Sbjct: 556 HGFA-HRAVELFNQMLEDGIKPNEVTYIAVLSACSHVGLVDEGWKYFDSMSKNHGITPRM 614
Query: 368 FVGNSLVSMYARFGRMEEAIRAFDSL 445
+V + R G +E+A++ SL
Sbjct: 615 EHYACMVDLLGRSGSLEKAVQFIKSL 640
Score = 76.3 bits (186), Expect = 5e-12
Identities = 51/192 (26%), Positives = 100/192 (52%), Gaps = 3/192 (1%)
Frame = +2
Query: 5 EFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDE-HSVMSWTTIISG 181
+FG+ +HS+ L D + +L+ +Y+K + + K+F+ M E ++SW+ +IS
Sbjct: 84 QFGQLLHSKLNDSPLEPDTILLNSLISLYSKMGSWETAEKIFESMGEKRDLVSWSAMISC 143
Query: 182 YAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAF 361
YA M E ++ F +M+ PN F +S++++AC + VG I VIK+G
Sbjct: 144 YAHCGMELE-SVFTFFDMVEFGEYPNQFCFSAVIQACCSAELGWVGLAIFGFVIKTGYFE 202
Query: 362 VNF-VGNSLVSMYAR-FGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQ 535
+ VG +L+ ++A+ F + A + FD + E+N+V+ + ++ + A+ + +
Sbjct: 203 SDICVGCALIDLFAKGFSDLRSAKKVFDRMPERNLVTWTLMITRFSQLGASKDAVRLFLE 262
Query: 536 IQSMDMGANAFT 571
+ S + FT
Sbjct: 263 MVSEGFVPDRFT 274
>ref|XP_006404168.1| hypothetical protein EUTSA_v10010119mg [Eutrema salsugineum]
gi|557105287|gb|ESQ45621.1| hypothetical protein
EUTSA_v10010119mg [Eutrema salsugineum]
Length = 850
Score = 197 bits (502), Expect = 1e-48
Identities = 103/194 (53%), Positives = 135/194 (69%), Gaps = 4/194 (2%)
Frame = +2
Query: 2 LEFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSL---MDDSRKVFDRMDEHSVMSWTTI 172
L G+ +HS AIR GLA D VGC+LVDMYAKCS+ +DD RKVFDR+ +HSVMSWT +
Sbjct: 285 LSLGKQLHSWAIRSGLADD--VGCSLVDMYAKCSVDDSLDDCRKVFDRIQDHSVMSWTAL 342
Query: 173 ISGYAQSSMHDEKAIELFINMIN-GSVRPNHFTYSSILKACANLADSQVGQQIHARVIKS 349
I+GY Q+ D +AI LF MI G V+PNHFT+SS KAC NL+D + G+Q+ A K
Sbjct: 343 ITGYMQNCNLDTEAISLFCEMITQGRVQPNHFTFSSAFKACGNLSDPRGGKQVLAHAFKR 402
Query: 350 GLAFVNFVGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVL 529
GLA N V NS++SM+ + RME+A RAF+SL EKN+VS N DG +N ++E+A E+
Sbjct: 403 GLASNNCVANSVISMFVKADRMEDARRAFESLSEKNLVSYNTFLDGTCRNLDFEEAFELF 462
Query: 530 YQIQSMDMGANAFT 571
+I +G +AFT
Sbjct: 463 NEITERGLGVSAFT 476
Score = 110 bits (275), Expect = 3e-22
Identities = 57/187 (30%), Positives = 111/187 (59%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G+ + + A + GLA + CV +++ M+ K M+D+R+ F+ + E +++S+ T + G +
Sbjct: 392 GKQVLAHAFKRGLASNNCVANSVISMFVKADRMEDARRAFESLSEKNLVSYNTFLDGTCR 451
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNF 370
+ + E+A ELF + + + FT++S+L A++ + G+QIH++V+K GL+
Sbjct: 452 N-LDFEEAFELFNEITERGLGVSAFTFASLLSGVASIGSIRKGEQIHSQVLKLGLSCNQP 510
Query: 371 VGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQIQSMD 550
V N+L+SMY+R G ++ A R F+ + ++NV+S ++ G AK+ ++ +E Q+
Sbjct: 511 VSNALISMYSRCGSIDTASRVFNLMEDRNVISWTSMITGFAKHGFAKRVLETFSQMTEEG 570
Query: 551 MGANAFT 571
M N T
Sbjct: 571 MKPNEVT 577
Score = 100 bits (248), Expect = 3e-19
Identities = 57/156 (36%), Positives = 95/156 (60%), Gaps = 4/156 (2%)
Frame = +2
Query: 56 DACVGCTLVDMYAKC-SLMDDSRKVFDRMDEHSVMSWTTIISGYAQSSMHDEKAIELFIN 232
D CVGC+L+DM+ K + ++++ KVFD+M E +V++WT +I+ Q E AI F++
Sbjct: 201 DVCVGCSLIDMFVKGENNLENAYKVFDQMSELNVVTWTLMITRCMQMGFPRE-AIRFFLD 259
Query: 233 MINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNFVGNSLVSMYARFG- 409
M+ + FT SS+ ACA L + +G+Q+H+ I+SGLA + VG SLV MYA+
Sbjct: 260 MVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLA--DDVGCSLVDMYAKCSV 317
Query: 410 --RMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYE 511
+++ + FD + + +V+S A+ G +N N +
Sbjct: 318 DDSLDDCRKVFDRIQDHSVMSWTALITGYMQNCNLD 353
Score = 77.8 bits (190), Expect = 2e-12
Identities = 34/97 (35%), Positives = 64/97 (65%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G +HSQ ++LGL+ + V L+ MY++C +D + +VF+ M++ +V+SWT++I+G+A+
Sbjct: 493 GEQIHSQVLKLGLSCNQPVSNALISMYSRCGSIDTASRVFNLMEDRNVISWTSMITGFAK 552
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANL 301
++ +E F M ++PN TY +IL AC+++
Sbjct: 553 HGFA-KRVLETFSQMTEEGMKPNEVTYVAILSACSHV 588
Score = 70.9 bits (172), Expect = 2e-10
Identities = 46/192 (23%), Positives = 98/192 (51%), Gaps = 5/192 (2%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMD---EHSVMSWTTIISG 181
G+ +H++ + + D+ + +L+ +Y+K + + VF+ M+ + V+SW+ ++
Sbjct: 81 GKLVHARLVEFNIEPDSVLYNSLISLYSKSGDLARAEDVFETMERFGKRDVVSWSAMMVC 140
Query: 182 YAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAF 361
+A + + AIELF+ + PN + Y+++++AC+N +G+ I ++K+G
Sbjct: 141 FANNGK-ELNAIELFVRFLELGFVPNDYCYTAVIRACSNSEYVSIGRVILGFLMKTGHFE 199
Query: 362 VNF-VGNSLVSMYAR-FGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQ 535
+ VG SL+ M+ + +E A + FD + E NVV+ + C + +AI
Sbjct: 200 SDVCVGCSLIDMFVKGENNLENAYKVFDQMSELNVVTWTLMITRCMQMGFPREAIRFFLD 259
Query: 536 IQSMDMGANAFT 571
+ ++ FT
Sbjct: 260 MVLSGFESDKFT 271
>ref|XP_004960622.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Setaria italica]
Length = 827
Score = 195 bits (495), Expect = 8e-48
Identities = 100/190 (52%), Positives = 128/190 (67%), Gaps = 3/190 (1%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSL---MDDSRKVFDRMDEHSVMSWTTIISG 181
G+ +HS A+RLGL D+CV C LVDMYAK + M ++RKVF+RM +H+VMSWT ++SG
Sbjct: 275 GQQLHSLALRLGLESDSCVSCGLVDMYAKSHIGQSMHNARKVFNRMPKHNVMSWTALLSG 334
Query: 182 YAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAF 361
Y Q D K + L M+N +RPNH TYSS+LKACANL D G+QIHA IKS L
Sbjct: 335 YVQRGSQDNKVLILLCEMLNEGIRPNHITYSSLLKACANLGDQDSGRQIHAHCIKSSLDN 394
Query: 362 VNFVGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQIQ 541
VN VGN++VSMYA G M EA +AFD LYEKN+VS + DG ++ + YQ+Q
Sbjct: 395 VNVVGNAVVSMYAESGCMAEATQAFDQLYEKNMVSFSCDFDGDGRSQD--------YQVQ 446
Query: 542 SMDMGANAFT 571
MD+G + FT
Sbjct: 447 RMDVGISTFT 456
Score = 107 bits (266), Expect = 3e-21
Identities = 58/161 (36%), Positives = 98/161 (60%), Gaps = 3/161 (1%)
Frame = +2
Query: 56 DACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQSSMHDEKAIELFINM 235
D VGC L+DM+AK + +R+VFD + E +V+ WT +I+ YAQ S + E+A+ELF++M
Sbjct: 189 DVSVGCALIDMFAKNGDLVAARRVFDGLVERTVVVWTLLITRYAQDS-YPEEAVELFLDM 247
Query: 236 INGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNFVGNSLVSMYAR--FG 409
+ +P+ +T SS+L AC L ++GQQ+H+ ++ GL + V LV MYA+ G
Sbjct: 248 LENGFQPDQYTMSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHIG 307
Query: 410 R-MEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVL 529
+ M A + F+ + + NV+S A+ G + + + + +L
Sbjct: 308 QSMHNARKVFNRMPKHNVMSWTALLSGYVQRGSQDNKVLIL 348
Score = 103 bits (257), Expect = 3e-20
Identities = 59/187 (31%), Positives = 107/187 (57%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
GR +H+ I+ L + VG +V MYA+ M ++ + FD++ E +++S++ G +
Sbjct: 380 GRQIHAHCIKSSLDNVNVVGNAVVSMYAESGCMAEATQAFDQLYEKNMVSFSCDFDGDGR 439
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNF 370
S + + +++ I+ FT++S++ A A++ GQQ+HA +K+G
Sbjct: 440 SQDYQVQRMDVGIST---------FTFASLISAAASVGLLTKGQQLHALSLKAGFGSDRG 490
Query: 371 VGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQIQSMD 550
+GNSLVSMY+R G +E+A RAF+ + + NV+S ++ G AK+ E+A+E+ Y + S
Sbjct: 491 IGNSLVSMYSRCGCLEDACRAFEEMNDHNVISWTSMISGLAKHGYAERALELFYDMISAG 550
Query: 551 MGANAFT 571
+ N T
Sbjct: 551 VKPNDVT 557
Score = 97.4 bits (241), Expect = 2e-18
Identities = 47/141 (33%), Positives = 92/141 (65%), Gaps = 2/141 (1%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G+ +H+ +++ G D +G +LV MY++C ++D+ + F+ M++H+V+SWT++ISG A+
Sbjct: 473 GQQLHALSLKAGFGSDRGIGNSLVSMYSRCGCLEDACRAFEEMNDHNVISWTSMISGLAK 532
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNF 370
+ E+A+ELF +MI+ V+PN TY ++L AC++ + G++ H R+++ G +
Sbjct: 533 HG-YAERALELFYDMISAGVKPNDVTYIAVLSACSHAGLVKEGKE-HFRMMQKGHGLIPR 590
Query: 371 VGN--SLVSMYARFGRMEEAI 427
+ + +V + R G +EEA+
Sbjct: 591 MEHYACMVDLLGRSGLVEEAL 611
Score = 77.8 bits (190), Expect = 2e-12
Identities = 60/195 (30%), Positives = 96/195 (49%), Gaps = 6/195 (3%)
Frame = +2
Query: 2 LEFGRSMHSQAIRLG--LAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDE--HSVMSWTT 169
L GR++H++ +R G L DA V +L+ +Y+KC + +R VFD M ++SWT
Sbjct: 64 LRLGRALHARLLRTGTLLEADAVVANSLLTLYSKCGAVAAARSVFDGMPAGLRDLVSWTA 123
Query: 170 IISGYAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKAC-ANLADSQVGQQIHARVIK 346
+ S A++ E A+ L + RPN FT + +AC + G + V K
Sbjct: 124 MASCLARNGAEAE-ALRLLGGTLEAGHRPNAFTLCAAAQACFVSELFHSAGGAVLGMVFK 182
Query: 347 SGLAFVNF-VGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIE 523
G + VG +L+ M+A+ G + A R FD L E+ VV + A++ E+A+E
Sbjct: 183 MGFWGTDVSVGCALIDMFAKNGDLVAARRVFDGLVERTVVVWTLLITRYAQDSYPEEAVE 242
Query: 524 VLYQIQSMDMGANAF 568
+ +DM N F
Sbjct: 243 LF-----LDMLENGF 252
>ref|XP_006290593.1| hypothetical protein CARUB_v10016682mg [Capsella rubella]
gi|482559300|gb|EOA23491.1| hypothetical protein
CARUB_v10016682mg [Capsella rubella]
Length = 850
Score = 194 bits (492), Expect = 2e-47
Identities = 102/194 (52%), Positives = 133/194 (68%), Gaps = 4/194 (2%)
Frame = +2
Query: 2 LEFGRSMHSQAIRLGLAHDACVGCTLVDMYAKCSL---MDDSRKVFDRMDEHSVMSWTTI 172
L G+ +HS AIR GLA D V C+LVDMYAKCS+ +DD RKVFDRM HSVMSWT +
Sbjct: 285 LSLGKQLHSWAIRSGLADD--VECSLVDMYAKCSVDSSVDDCRKVFDRMQHHSVMSWTAL 342
Query: 173 ISGYAQSSMHDEKAIELFINMIN-GSVRPNHFTYSSILKACANLADSQVGQQIHARVIKS 349
I+GY Q+ +AI LF MI G V PNHFT+SS +KAC N+ D +VG+Q+ K
Sbjct: 343 ITGYMQNCNLAAEAINLFCEMITQGHVEPNHFTFSSAIKACGNILDPRVGKQVLGHAFKR 402
Query: 350 GLAFVNFVGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVL 529
GLA + V NS++SM+ + RME+A RAF+SL EKN+VS N DG +N ++EQA E+L
Sbjct: 403 GLASNSSVANSVISMFVKSDRMEDARRAFESLSEKNLVSYNTFLDGTCRNLDFEQAFELL 462
Query: 530 YQIQSMDMGANAFT 571
+I ++G +AFT
Sbjct: 463 NEITERELGVSAFT 476
Score = 101 bits (251), Expect = 2e-19
Identities = 53/187 (28%), Positives = 109/187 (58%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G+ + A + GLA ++ V +++ M+ K M+D+R+ F+ + E +++S+ T + G +
Sbjct: 392 GKQVLGHAFKRGLASNSSVANSVISMFVKSDRMEDARRAFESLSEKNLVSYNTFLDGTCR 451
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNF 370
+ + E+A EL + + + FT++S+L A++ + G+QIH++V+K GLA
Sbjct: 452 N-LDFEQAFELLNEITERELGVSAFTFASLLTGVASVGSIRKGEQIHSQVLKLGLACNQP 510
Query: 371 VGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQIQSMD 550
V N+L+SMY++ G ++ A + F + ++NV+S ++ G AK+ + ++ +E Q+
Sbjct: 511 VCNALISMYSKCGSIDTASQVFKLMEDRNVISWTSMITGFAKHGSAQRVLETFNQMTEAG 570
Query: 551 MGANAFT 571
+ N T
Sbjct: 571 VKPNEVT 577
Score = 95.5 bits (236), Expect = 8e-18
Identities = 56/154 (36%), Positives = 91/154 (59%), Gaps = 4/154 (2%)
Frame = +2
Query: 56 DACVGCTLVDMYAKC-SLMDDSRKVFDRMDEHSVMSWTTIISGYAQSSMHDEKAIELFIN 232
D CVGC+L+DM+ K + ++ + KVFD+M E +V++WT +I+ Q E AI F++
Sbjct: 201 DVCVGCSLIDMFVKGDNNLESAYKVFDKMSELNVVTWTLMITRCMQMGFPRE-AIRFFLD 259
Query: 233 MINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNFVGNSLVSMYARF-- 406
M+ + FT SS+ ACA L + +G+Q+H+ I+SGLA + V SLV MYA+
Sbjct: 260 MVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLA--DDVECSLVDMYAKCSV 317
Query: 407 -GRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYN 505
+++ + FD + +V+S A+ G +N N
Sbjct: 318 DSSVDDCRKVFDRMQHHSVMSWTALITGYMQNCN 351
Score = 79.3 bits (194), Expect = 6e-13
Identities = 37/97 (38%), Positives = 63/97 (64%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G +HSQ ++LGLA + V L+ MY+KC +D + +VF M++ +V+SWT++I+G+A+
Sbjct: 493 GEQIHSQVLKLGLACNQPVCNALISMYSKCGSIDTASQVFKLMEDRNVISWTSMITGFAK 552
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANL 301
++ +E F M V+PN TY +IL AC+++
Sbjct: 553 HGSA-QRVLETFNQMTEAGVKPNEVTYVAILSACSHV 588
Score = 66.6 bits (161), Expect = 4e-09
Identities = 45/192 (23%), Positives = 96/192 (50%), Gaps = 5/192 (2%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFD---RMDEHSVMSWTTIISG 181
G+ +H++ + + D+ + +L+ +Y+K + VF+ R + V+SW+ +++
Sbjct: 81 GKLVHARLVEFEIEPDSVLYNSLISLYSKSGDSAKAEDVFETMGRFGKRDVVSWSAMMAC 140
Query: 182 YAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAF 361
+ + + AI LF+ + + PN + Y+++++AC+N VG+ I ++K+G
Sbjct: 141 FGNNG-RELDAIRLFVEFLELGLVPNDYCYTAVIRACSNSEYVGVGRVILGFLMKTGHFE 199
Query: 362 VNF-VGNSLVSMYAR-FGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQ 535
+ VG SL+ M+ + +E A + FD + E NVV+ + C + +AI
Sbjct: 200 SDVCVGCSLIDMFVKGDNNLESAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLD 259
Query: 536 IQSMDMGANAFT 571
+ ++ FT
Sbjct: 260 MVLSGFESDKFT 271
>gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 193 bits (490), Expect = 3e-47
Identities = 96/190 (50%), Positives = 129/190 (67%), Gaps = 3/190 (1%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKC---SLMDDSRKVFDRMDEHSVMSWTTIISG 181
G+ +HS A+RLGL D+CV C LVDMYAK + ++R+VF+RM +H+VM+WT ++SG
Sbjct: 274 GQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSG 333
Query: 182 YAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAF 361
Y Q D + + LF M+N +RPNH TYSS+LKACANL D G+QIH +KS LA
Sbjct: 334 YVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLAD 393
Query: 362 VNFVGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQIQ 541
+N VGN+LVSMYA G +EEA AFD LYEKN+VS + DG ++ Y+ YQI+
Sbjct: 394 LNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQD-----YQIE 448
Query: 542 SMDMGANAFT 571
M++G + FT
Sbjct: 449 RMELGISTFT 458
Score = 105 bits (262), Expect = 8e-21
Identities = 56/162 (34%), Positives = 94/162 (58%), Gaps = 3/162 (1%)
Frame = +2
Query: 56 DACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQSSMHDEKAIELFINM 235
D VGC L+DM+AK + R+VFD + E +V+ WT +I+ YAQS DE A+ELF++M
Sbjct: 188 DVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDE-AVELFLDM 246
Query: 236 INGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNFVGNSLVSMYARFGR- 412
+ +P+ +T SS+L AC L ++GQQ+H+ ++ GL + V LV MYA+
Sbjct: 247 LENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNG 306
Query: 413 --MEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLY 532
+ A F+ + + NV++ A+ G + + + + +L+
Sbjct: 307 QSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILF 348
Score = 98.2 bits (243), Expect = 1e-18
Identities = 55/187 (29%), Positives = 105/187 (56%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
GR +H+ ++ LA VG LV MYA+ ++++R FD++ E +++S++ + G +
Sbjct: 379 GRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGR 438
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNF 370
S+ + + IE + + FT+ S++ A A++ GQ++HA +K+G
Sbjct: 439 SNTYQDYQIERM------ELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRA 492
Query: 371 VGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIEVLYQIQSMD 550
+GNSLVSMY+R G + +A + FD + + NV+S ++ G AK+ +A+E+ + + +
Sbjct: 493 IGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAG 552
Query: 551 MGANAFT 571
+ N T
Sbjct: 553 VKPNDVT 559
Score = 90.5 bits (223), Expect = 3e-16
Identities = 46/141 (32%), Positives = 89/141 (63%), Gaps = 2/141 (1%)
Frame = +2
Query: 11 GRSMHSQAIRLGLAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDEHSVMSWTTIISGYAQ 190
G+ +H+ +++ G D +G +LV MY++C + D+ +VFD M++H+V+SWT++ISG A+
Sbjct: 475 GQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAK 534
Query: 191 SSMHDEKAIELFINMINGSVRPNHFTYSSILKACANLADSQVGQQIHARVIKSGLAFVNF 370
+ +A+ELF +MI V+PN TY ++L AC++ + G++ H R+++ +
Sbjct: 535 HG-YAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKE-HFRMMQKHHGLIPR 592
Query: 371 VGN--SLVSMYARFGRMEEAI 427
+ + +V + R G +E+A+
Sbjct: 593 MEHYACMVDLLGRSGLVEDAL 613
Score = 72.0 bits (175), Expect = 1e-10
Identities = 57/195 (29%), Positives = 96/195 (49%), Gaps = 6/195 (3%)
Frame = +2
Query: 2 LEFGRSMHSQAIRLG--LAHDACVGCTLVDMYAKCSLMDDSRKVFDRMDE--HSVMSWTT 169
+ GR++ +R G L DA V +L+ +Y+KCS + +R VFD M ++SWT
Sbjct: 63 IHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTA 122
Query: 170 IISGYAQSSMHDEKAIELFINMINGSVRPNHFTYSSILKAC-ANLADSQVGQQIHARVIK 346
+ S +++ E A+ LF + + PN FT + +AC A+ G + V K
Sbjct: 123 MASCLSRNGAEAE-ALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFK 181
Query: 347 SGLAFVNF-VGNSLVSMYARFGRMEEAIRAFDSLYEKNVVSCNAIADGCAKNYNYEQAIE 523
G + VG +L+ M+A+ G + R FD L+E+ VV + A++ ++A+E
Sbjct: 182 LGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVE 241
Query: 524 VLYQIQSMDMGANAF 568
+ +DM N F
Sbjct: 242 LF-----LDMLENGF 251