BLASTX nr result
ID: Zingiber25_contig00043559
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Zingiber25_contig00043559 (410 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABF70074.1| F-box family protein [Musa acuminata] 62 6e-08 gb|ABF70073.1| F-box family protein [Musa acuminata] 62 8e-08 >gb|ABF70074.1| F-box family protein [Musa acuminata] Length = 372 Score = 62.4 bits (150), Expect = 6e-08 Identities = 43/126 (34%), Positives = 58/126 (46%), Gaps = 3/126 (2%) Frame = -1 Query: 371 IVASSLSNMDGDPHDWSXXXXXXXXXXXXXXXLPHRIVFRTVCKSWCSALPSVSVPYPWL 192 IV +S + D +WS LPHRI F C +W A +P P L Sbjct: 10 IVLNSQEDSTMDRPNWSSLPLDIVTMISEELPLPHRICFHATCNAWYFATLLKPIPSPLL 69 Query: 191 LLPAQQID--DSCTFL-PLPSDNEHDSYFKFSPVPPLYGMCYAGSNGGWVAIVDLAFHVS 21 L + + DSC F+ P+ + +F + P+ L+G GSN GW+AI D VS Sbjct: 70 LTRNDESEHSDSCLFVSPIT-----EFFFIYFPISELHGTRCVGSNAGWLAIFDEQLDVS 124 Query: 20 LLNPLT 3 LLN LT Sbjct: 125 LLNLLT 130 >gb|ABF70073.1| F-box family protein [Musa acuminata] Length = 428 Score = 62.0 bits (149), Expect = 8e-08 Identities = 39/114 (34%), Positives = 54/114 (47%), Gaps = 2/114 (1%) Frame = -1 Query: 338 DPHDWSXXXXXXXXXXXXXXXLPHRIVFRTVCKSWCSALPSVSVPYPWLLLPAQQID--D 165 D +WS LPHRI F C +W A +P P LL+ + + D Sbjct: 28 DKPNWSSLPLDIVTLISEELPLPHRICFHATCNAWYFATLLKPIPSPLLLVRNDESEHND 87 Query: 164 SCTFLPLPSDNEHDSYFKFSPVPPLYGMCYAGSNGGWVAIVDLAFHVSLLNPLT 3 SC F+ + + +F + P+ L+G GSN GW+AI+D VSLLN LT Sbjct: 88 SCLFV----SSITEFFFIYFPINELHGTRCVGSNAGWLAILDEQLDVSLLNLLT 137