BLASTX nr result
ID: Zingiber25_contig00042974
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00042974
(380 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004981076.1| PREDICTED: pentatricopeptide repeat-containi... 112 7e-23
ref|XP_004981075.1| PREDICTED: pentatricopeptide repeat-containi... 112 7e-23
ref|XP_006650883.1| PREDICTED: pentatricopeptide repeat-containi... 111 1e-22
gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japo... 109 4e-22
gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indi... 109 4e-22
gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sat... 109 4e-22
ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group] g... 109 4e-22
dbj|BAJ88475.1| predicted protein [Hordeum vulgare subsp. vulgare] 107 2e-21
dbj|BAJ89568.1| predicted protein [Hordeum vulgare subsp. vulgare] 107 2e-21
ref|XP_003559158.1| PREDICTED: pentatricopeptide repeat-containi... 104 1e-20
ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [S... 100 3e-19
gb|AFW67003.1| putative pentatricopeptide repeat family protein ... 99 5e-19
ref|XP_002981421.1| hypothetical protein SELMODRAFT_114363 [Sela... 90 3e-16
ref|XP_004961923.1| PREDICTED: pentatricopeptide repeat-containi... 89 5e-16
ref|XP_002969951.1| hypothetical protein SELMODRAFT_92231 [Selag... 89 5e-16
ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [S... 89 5e-16
ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containi... 89 8e-16
ref|XP_001785902.1| predicted protein [Physcomitrella patens] gi... 88 1e-15
ref|XP_002867196.1| pentatricopeptide repeat-containing protein ... 87 2e-15
ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 86 4e-15
>ref|XP_004981076.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like isoform X2 [Setaria italica]
Length = 681
Score = 112 bits (279), Expect = 7e-23
Identities = 49/86 (56%), Positives = 70/86 (81%)
Frame = -2
Query: 379 AAKIFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSWIQINNEVHS 200
A K+ EL+ DSASYVL+SN++A+HGEW DA VR +M+E ++KEAG SWI++ NEVH+
Sbjct: 587 ADKLMELSERDSASYVLMSNIYAMHGEWQDAGRVRRRMDEVGVKKEAGESWIEVKNEVHT 646
Query: 199 FVSRDESHPESATIYQRLEEIFNIIK 122
FV+RD SHP+SA+IYQ L E+ ++++
Sbjct: 647 FVARDTSHPDSASIYQMLAELVDVMQ 672
>ref|XP_004981075.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like isoform X1 [Setaria italica]
Length = 683
Score = 112 bits (279), Expect = 7e-23
Identities = 49/86 (56%), Positives = 70/86 (81%)
Frame = -2
Query: 379 AAKIFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSWIQINNEVHS 200
A K+ EL+ DSASYVL+SN++A+HGEW DA VR +M+E ++KEAG SWI++ NEVH+
Sbjct: 587 ADKLMELSERDSASYVLMSNIYAMHGEWQDAGRVRRRMDEVGVKKEAGESWIEVKNEVHT 646
Query: 199 FVSRDESHPESATIYQRLEEIFNIIK 122
FV+RD SHP+SA+IYQ L E+ ++++
Sbjct: 647 FVARDTSHPDSASIYQMLAELVDVMQ 672
>ref|XP_006650883.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Oryza brachyantha]
Length = 709
Score = 111 bits (277), Expect = 1e-22
Identities = 49/85 (57%), Positives = 69/85 (81%)
Frame = -2
Query: 379 AAKIFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSWIQINNEVHS 200
A K+ EL+ DSASYVL+S++HA+HGEW+DA VR +M+E ++K+AG SWI+I NEVHS
Sbjct: 603 ADKLMELSGTDSASYVLMSSIHAMHGEWEDAGKVRRRMDETGVKKDAGCSWIEIKNEVHS 662
Query: 199 FVSRDESHPESATIYQRLEEIFNII 125
F +RD SHP+SA+IYQ L E+ +++
Sbjct: 663 FAARDMSHPDSASIYQMLGELVSVM 687
>gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 109 bits (272), Expect = 4e-22
Identities = 48/86 (55%), Positives = 69/86 (80%)
Frame = -2
Query: 379 AAKIFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSWIQINNEVHS 200
A ++ EL+ DSASYVL+SN++A+HGEW+DA+ VR +M+E ++K+AG SWI+INNEVH+
Sbjct: 604 ADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHT 663
Query: 199 FVSRDESHPESATIYQRLEEIFNIIK 122
F SRD SHP S +IYQ L E+ +++
Sbjct: 664 FASRDMSHPNSDSIYQMLGELVAVMQ 689
>gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
Length = 656
Score = 109 bits (272), Expect = 4e-22
Identities = 48/86 (55%), Positives = 69/86 (80%)
Frame = -2
Query: 379 AAKIFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSWIQINNEVHS 200
A ++ EL+ DSASYVL+SN++A+HGEW+DA+ VR +M+E ++K+AG SWI+INNEVH+
Sbjct: 558 ADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHT 617
Query: 199 FVSRDESHPESATIYQRLEEIFNIIK 122
F SRD SHP S +IYQ L E+ +++
Sbjct: 618 FASRDMSHPNSDSIYQMLGELVAVMQ 643
>gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 109 bits (272), Expect = 4e-22
Identities = 48/86 (55%), Positives = 69/86 (80%)
Frame = -2
Query: 379 AAKIFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSWIQINNEVHS 200
A ++ EL+ DSASYVL+SN++A+HGEW+DA+ VR +M+E ++K+AG SWI+INNEVH+
Sbjct: 531 ADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHT 590
Query: 199 FVSRDESHPESATIYQRLEEIFNIIK 122
F SRD SHP S +IYQ L E+ +++
Sbjct: 591 FASRDMSHPNSDSIYQMLGELVAVMQ 616
>ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide
repeat domain contianing protein [Oryza sativa Japonica
Group] gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza
sativa Japonica Group] gi|215686748|dbj|BAG89598.1|
unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 109 bits (272), Expect = 4e-22
Identities = 48/86 (55%), Positives = 69/86 (80%)
Frame = -2
Query: 379 AAKIFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSWIQINNEVHS 200
A ++ EL+ DSASYVL+SN++A+HGEW+DA+ VR +M+E ++K+AG SWI+INNEVH+
Sbjct: 604 ADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHT 663
Query: 199 FVSRDESHPESATIYQRLEEIFNIIK 122
F SRD SHP S +IYQ L E+ +++
Sbjct: 664 FASRDMSHPNSDSIYQMLGELVAVMQ 689
>dbj|BAJ88475.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 691
Score = 107 bits (267), Expect = 2e-21
Identities = 46/86 (53%), Positives = 69/86 (80%)
Frame = -2
Query: 379 AAKIFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSWIQINNEVHS 200
A K+ EL+ DSASYVL+S +HA+HGEW DA +VR +M+E ++KEAGRSW+++ NEVH+
Sbjct: 589 AEKLVELSDQDSASYVLMSGIHAMHGEWRDADMVRRRMDEAGVRKEAGRSWVEVRNEVHT 648
Query: 199 FVSRDESHPESATIYQRLEEIFNIIK 122
FV++D SHP+S +IY+ L E+ + ++
Sbjct: 649 FVAQDVSHPDSPSIYRMLWELSDAMR 674
>dbj|BAJ89568.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 691
Score = 107 bits (267), Expect = 2e-21
Identities = 46/86 (53%), Positives = 69/86 (80%)
Frame = -2
Query: 379 AAKIFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSWIQINNEVHS 200
A K+ EL+ DSASYVL+S +HA+HGEW DA +VR +M+E ++KEAGRSW+++ NEVH+
Sbjct: 589 AEKLVELSDQDSASYVLMSGIHAMHGEWRDADMVRRRMDEAGVRKEAGRSWVEVRNEVHT 648
Query: 199 FVSRDESHPESATIYQRLEEIFNIIK 122
FV++D SHP+S +IY+ L E+ + ++
Sbjct: 649 FVAQDVSHPDSPSIYRMLWELSDAMR 674
>ref|XP_003559158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 695
Score = 104 bits (259), Expect = 1e-20
Identities = 46/83 (55%), Positives = 66/83 (79%)
Frame = -2
Query: 349 DSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSWIQINNEVHSFVSRDESHPE 170
DSASYVL+S +HA+ GEW DA VR +M+E ++KEAG SW++++NEVH+FV+RD+SHP+
Sbjct: 602 DSASYVLMSGIHAMRGEWRDAYRVRRRMDEAGVRKEAGCSWVEVHNEVHTFVARDKSHPD 661
Query: 169 SATIYQRLEEIFNIIKSEKCLCE 101
SA+IYQ L E+F+ ++ C E
Sbjct: 662 SASIYQILWELFDAMQDTACDAE 684
>ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
gi|241919967|gb|EER93111.1| hypothetical protein
SORBIDRAFT_01g001570 [Sorghum bicolor]
Length = 693
Score = 99.8 bits (247), Expect = 3e-19
Identities = 45/84 (53%), Positives = 66/84 (78%)
Frame = -2
Query: 373 KIFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSWIQINNEVHSFV 194
K+ EL+ DSASYVL+SNL+A+H EW DA+ VR +M+E ++K+AG SWI++ NEV +FV
Sbjct: 600 KLMELSERDSASYVLMSNLYAMHEEWQDAERVRRRMDEIGVKKDAGWSWIEVKNEVSTFV 659
Query: 193 SRDESHPESATIYQRLEEIFNIIK 122
+RD SH +SA+IYQ L E+ +++
Sbjct: 660 ARDTSHSDSASIYQMLAELVVVMQ 683
>gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 719
Score = 99.4 bits (246), Expect = 5e-19
Identities = 45/86 (52%), Positives = 67/86 (77%)
Frame = -2
Query: 379 AAKIFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSWIQINNEVHS 200
A K+ EL+ DSASYVL+SNL+A+H EW DA+ VR +M+E ++K+AG SWI++ NEV++
Sbjct: 624 ADKLMELSERDSASYVLMSNLYAMHEEWRDAERVRRRMDEIGVKKDAGWSWIEVKNEVNT 683
Query: 199 FVSRDESHPESATIYQRLEEIFNIIK 122
FV+ D SHP+S +IYQ L E+ +++
Sbjct: 684 FVAGDMSHPDSTSIYQMLAELLVVMQ 709
>ref|XP_002981421.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
gi|300150961|gb|EFJ17609.1| hypothetical protein
SELMODRAFT_114363 [Selaginella moellendorffii]
Length = 789
Score = 90.1 bits (222), Expect = 3e-16
Identities = 39/89 (43%), Positives = 59/89 (66%)
Frame = -2
Query: 379 AAKIFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSWIQINNEVHS 200
A I + ASY +LSN+++ G WD+A+ +R +M EN +KE GRSWI++ N VH
Sbjct: 608 AEAIVAIDPSHGASYTVLSNVYSAAGRWDEAEEIRRRMSENGARKEPGRSWIEVKNRVHE 667
Query: 199 FVSRDESHPESATIYQRLEEIFNIIKSEK 113
F +D SHP + IY+RL+E+ ++KSE+
Sbjct: 668 FAVKDRSHPRTGEIYERLDELRVVLKSEE 696
>ref|XP_004961923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Setaria italica]
Length = 872
Score = 89.4 bits (220), Expect = 5e-16
Identities = 44/100 (44%), Positives = 66/100 (66%)
Frame = -2
Query: 379 AAKIFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSWIQINNEVHS 200
A K+ L LDSA+YVLLSN+++ G+W + VR M+ ++KEAG SWIQI N+VHS
Sbjct: 692 AEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTRKVKKEAGCSWIQIKNKVHS 751
Query: 199 FVSRDESHPESATIYQRLEEIFNIIKSEKCLCETNIGVNE 80
F++ D+SHP S IY +L+ + +K E +T+ ++E
Sbjct: 752 FIASDKSHPLSEQIYAKLKAMTARLKKEGYCPDTSFVLHE 791
>ref|XP_002969951.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
gi|300162462|gb|EFJ29075.1| hypothetical protein
SELMODRAFT_92231 [Selaginella moellendorffii]
Length = 789
Score = 89.4 bits (220), Expect = 5e-16
Identities = 39/89 (43%), Positives = 59/89 (66%)
Frame = -2
Query: 379 AAKIFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSWIQINNEVHS 200
A I + ASY +LSN+++ G WD+A+ +R +M EN +KE GRSWI++ N VH
Sbjct: 608 AEAIVAIDPSHGASYTVLSNVYSAAGRWDEAEEIRRRMGENGARKEPGRSWIEVKNRVHE 667
Query: 199 FVSRDESHPESATIYQRLEEIFNIIKSEK 113
F +D SHP + IY+RL+E+ ++KSE+
Sbjct: 668 FAVKDRSHPRTGEIYERLDELRVVLKSEE 696
>ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein
SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 89.4 bits (220), Expect = 5e-16
Identities = 43/100 (43%), Positives = 64/100 (64%)
Frame = -2
Query: 379 AAKIFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSWIQINNEVHS 200
A K+ L DSA+YVLLSN+++ G+W + VR M+ ++KEAG SWIQI N+VHS
Sbjct: 698 AEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHS 757
Query: 199 FVSRDESHPESATIYQRLEEIFNIIKSEKCLCETNIGVNE 80
F++ D+SHP S IY +L + +K E +T+ ++E
Sbjct: 758 FIASDKSHPLSEQIYAKLRAMTTKLKQEGYCPDTSFALHE 797
>ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39530-like
[Cucumis sativus] gi|449515698|ref|XP_004164885.1|
PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
Length = 837
Score = 88.6 bits (218), Expect = 8e-16
Identities = 43/96 (44%), Positives = 60/96 (62%)
Frame = -2
Query: 379 AAKIFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSWIQINNEVHS 200
A + +DS SYV+LSN+ A G W D K +R KM+ N + KE G+SWI++N EVH
Sbjct: 737 AEMAISIDPMDSGSYVMLSNIFASKGMWGDVKRLRLKMDVNGVVKEPGQSWIEVNGEVHI 796
Query: 199 FVSRDESHPESATIYQRLEEIFNIIKSEKCLCETNI 92
FVSRD+ H E+ IY L+E+ +K C+ +T I
Sbjct: 797 FVSRDKVHDETDLIYLALDELTTQMKDVGCVHDTTI 832
>ref|XP_001785902.1| predicted protein [Physcomitrella patens] gi|162662428|gb|EDQ49285.1|
predicted protein [Physcomitrella patens]
Length = 908
Score = 87.8 bits (216), Expect = 1e-15
Identities = 39/96 (40%), Positives = 65/96 (67%)
Frame = -2
Query: 379 AAKIFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSWIQINNEVHS 200
A + +L +++YVLLSN++A G W+ +VR+ M+ I+KE GRSWI+++N++HS
Sbjct: 728 AKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHS 787
Query: 199 FVSRDESHPESATIYQRLEEIFNIIKSEKCLCETNI 92
FV D SHPES IY +L+++ +K+E + +T +
Sbjct: 788 FVVGDTSHPESKEIYAKLKDLIKRLKAEGYVPDTRL 823
>ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297313032|gb|EFH43455.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 997
Score = 87.4 bits (215), Expect = 2e-15
Identities = 38/95 (40%), Positives = 66/95 (69%)
Frame = -2
Query: 379 AAKIFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSWIQINNEVHS 200
A K+ EL LDS++YVLLSN++A +WD+ K+ R M+ + ++K+ G SWI++ N++H
Sbjct: 817 ATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHL 876
Query: 199 FVSRDESHPESATIYQRLEEIFNIIKSEKCLCETN 95
FV D S+P++ IY++++++ IK E + ET+
Sbjct: 877 FVVDDRSNPQTELIYKKVKDMIRDIKQEGYVPETD 911
>ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 86.3 bits (212), Expect = 4e-15
Identities = 40/100 (40%), Positives = 62/100 (62%)
Frame = -2
Query: 379 AAKIFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSWIQINNEVHS 200
A +FEL + Y++LSN++A G W D VRN M+ +++K AG SWI+I+NEVH
Sbjct: 514 ARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHR 573
Query: 199 FVSRDESHPESATIYQRLEEIFNIIKSEKCLCETNIGVNE 80
F S D +HPES IY++L + ++ E TN+ +++
Sbjct: 574 FTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHD 613