BLASTX nr result

ID: Zingiber25_contig00042934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00042934
         (386 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006289252.1| hypothetical protein CARUB_v10002716mg, part...    59   7e-07
ref|XP_006476123.1| PREDICTED: uncharacterized protein LOC102609...    59   9e-07
ref|XP_006289594.1| hypothetical protein CARUB_v10003145mg [Caps...    57   2e-06

>ref|XP_006289252.1| hypothetical protein CARUB_v10002716mg, partial [Capsella rubella]
           gi|482557958|gb|EOA22150.1| hypothetical protein
           CARUB_v10002716mg, partial [Capsella rubella]
          Length = 424

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 43/119 (36%), Positives = 57/119 (47%), Gaps = 14/119 (11%)
 Frame = +2

Query: 2   GDTPVGYYQTSLFEGLSRTATLALFSGDVSSPRIWDSPHPTTAMGSGTFA-ALFDSRGSR 178
           G+  +GY+  +LF  L  +AT   + G+V SP I   PH  T+MGSG +A  L+      
Sbjct: 310 GNNVLGYWPGTLFNSLKHSATAVQWGGEVHSPNILKKPHTVTSMGSGQWANYLYGEACYH 369

Query: 179 TSLDI------------TNMLTHISPTATSKLL*C*EFCRLWTEPLFYYGGPGRN-YLP 316
           T+L I             N  T  S   T+KL          +EP FY+GGPGRN Y P
Sbjct: 370 TNLRIKDYSMQLKYPKYLNEYTDESNCYTTKL----HRKTYMSEPRFYFGGPGRNRYCP 424


>ref|XP_006476123.1| PREDICTED: uncharacterized protein LOC102609004 [Citrus sinensis]
          Length = 424

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 17/119 (14%)
 Frame = +2

Query: 2   GDTPVGYYQTSLFEGLSRTATLALFSGDVSSPRIWDSPHPTTAMGSGTFAALFDSRGSRT 181
           G+  VGY+  SLF  LS +AT+  + G V SP +  +PH  TAMGSG F+     +GS  
Sbjct: 310 GNVVVGYWPGSLFGYLSHSATIVEWGGQVYSPNVKKTPHTKTAMGSGEFS--HSLQGSAC 367

Query: 182 SLDITNMLTHISPTATSKLL*C*EFCRLW-----------------TEPLFYYGGPGRN 307
           S++      H+     S  L   ++   W                 TEP+F++GGPG+N
Sbjct: 368 SIE------HVRIIDYSLQLKYPQWVGTWADEYYCYDAYNFVEGYTTEPVFFFGGPGQN 420


>ref|XP_006289594.1| hypothetical protein CARUB_v10003145mg [Capsella rubella]
           gi|482558300|gb|EOA22492.1| hypothetical protein
           CARUB_v10003145mg [Capsella rubella]
          Length = 439

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
 Frame = +2

Query: 14  VGYYQTSLFEGLSRTATLALFSGDVSSPRIWDSPHPTTAMGSGTFAA-LFDSRGSRTSLD 190
           +GY+  SLF  L  +AT   + G+V SP +   PH TT+MGSG  AA L++     T++ 
Sbjct: 329 IGYWPGSLFSYLKHSATAVQWGGEVHSPNVRKKPHTTTSMGSGRRAADLWEKACYHTNIR 388

Query: 191 ITNMLTHISPTATSKLL*C*EFC--------RLWTEPLFYYGGPGRNYL 313
           I +    I            E+C           +EP FY+GGPG+N L
Sbjct: 389 IKDNSLFIKYPKYLSEYSDEEYCYSTNLHRETYMSEPHFYFGGPGQNSL 437


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