BLASTX nr result
ID: Zingiber25_contig00042906
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00042906
(297 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002466524.1| hypothetical protein SORBIDRAFT_01g009310 [S... 93 4e-17
ref|XP_006651775.1| PREDICTED: uncharacterized protein LOC102700... 92 9e-17
ref|XP_004981894.1| PREDICTED: uncharacterized protein LOC101784... 90 3e-16
ref|NP_001051157.1| Os03g0729700 [Oryza sativa Japonica Group] g... 90 3e-16
emb|CBI25132.3| unnamed protein product [Vitis vinifera] 90 4e-16
ref|XP_002271957.1| PREDICTED: ribosomal RNA small subunit methy... 90 4e-16
dbj|BAJ92836.1| predicted protein [Hordeum vulgare subsp. vulgare] 89 6e-16
ref|XP_006606004.1| PREDICTED: uncharacterized protein LOC100777... 88 1e-15
gb|ESW15129.1| hypothetical protein PHAVU_007G046900g [Phaseolus... 88 1e-15
ref|XP_003559468.1| PREDICTED: ribosomal RNA small subunit methy... 88 1e-15
gb|AFK39673.1| unknown [Medicago truncatula] 86 7e-15
gb|AFW67711.1| hypothetical protein ZEAMMB73_952480 [Zea mays] 84 2e-14
ref|XP_006857098.1| hypothetical protein AMTR_s00065p00117290 [A... 83 4e-14
ref|XP_004230680.1| PREDICTED: ribosomal RNA small subunit methy... 83 4e-14
ref|XP_006486891.1| PREDICTED: uncharacterized protein LOC102624... 82 7e-14
ref|XP_004496867.1| PREDICTED: ribosomal RNA small subunit methy... 82 7e-14
ref|XP_003535680.1| PREDICTED: uncharacterized protein LOC100797... 82 1e-13
gb|EXB62116.1| Ribosomal RNA small subunit methyltransferase E [... 81 1e-13
gb|EMJ01720.1| hypothetical protein PRUPE_ppa009413mg [Prunus pe... 80 2e-13
ref|XP_004292103.1| PREDICTED: ribosomal RNA small subunit methy... 80 4e-13
>ref|XP_002466524.1| hypothetical protein SORBIDRAFT_01g009310 [Sorghum bicolor]
gi|241920378|gb|EER93522.1| hypothetical protein
SORBIDRAFT_01g009310 [Sorghum bicolor]
Length = 287
Score = 92.8 bits (229), Expect = 4e-17
Identities = 53/96 (55%), Positives = 62/96 (64%)
Frame = +3
Query: 9 STSLSSGEEAMPRVAPRLPLCGGLLCRTWRRGFSGGLRVVPSDAAGSQSRGGLPRFHSPL 188
S +LSS A+ R AP P LL R SG A S++RGGLPRFH+P
Sbjct: 4 SAALSSSSSALLRGAP--PRTRQLLLAAPARAHSG---------AASRARGGLPRFHAPS 52
Query: 189 LLPSKGNVVRIQGDEFWHMSKVLRLGPNDRVQLFDG 296
L SKG V+RIQGDEFWHM++VLRLG NDRV+LFDG
Sbjct: 53 LPSSKGEVIRIQGDEFWHMTRVLRLGINDRVELFDG 88
>ref|XP_006651775.1| PREDICTED: uncharacterized protein LOC102700229 [Oryza brachyantha]
Length = 290
Score = 91.7 bits (226), Expect = 9e-17
Identities = 42/55 (76%), Positives = 48/55 (87%)
Frame = +3
Query: 132 SDAAGSQSRGGLPRFHSPLLLPSKGNVVRIQGDEFWHMSKVLRLGPNDRVQLFDG 296
S A GS++RGGLPRFH+P L SKG VVRIQGDEFWHM++VLRLG NDRV+LFDG
Sbjct: 31 STAGGSRARGGLPRFHAPTLPSSKGEVVRIQGDEFWHMARVLRLGVNDRVELFDG 85
>ref|XP_004981894.1| PREDICTED: uncharacterized protein LOC101784696 [Setaria italica]
Length = 294
Score = 90.1 bits (222), Expect = 3e-16
Identities = 50/96 (52%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Frame = +3
Query: 12 TSLSSGEEAMPRVAPRLPLCGGLLCRTWRRGFSGGLRVVPSDAAG-SQSRGGLPRFHSPL 188
++ SS A+ R PR+ RR + S AAG S++RGGLPRFH+P
Sbjct: 5 SAFSSSSSALLRGPPRV-----------RRLLAAAATRAHSSAAGASRARGGLPRFHTPS 53
Query: 189 LLPSKGNVVRIQGDEFWHMSKVLRLGPNDRVQLFDG 296
L SKG V+RIQGDEFWHM++VLRLG NDRV+LFDG
Sbjct: 54 LPSSKGEVIRIQGDEFWHMTRVLRLGVNDRVELFDG 89
>ref|NP_001051157.1| Os03g0729700 [Oryza sativa Japonica Group]
gi|113549628|dbj|BAF13071.1| Os03g0729700, partial
[Oryza sativa Japonica Group]
Length = 330
Score = 90.1 bits (222), Expect = 3e-16
Identities = 42/55 (76%), Positives = 47/55 (85%)
Frame = +3
Query: 132 SDAAGSQSRGGLPRFHSPLLLPSKGNVVRIQGDEFWHMSKVLRLGPNDRVQLFDG 296
S A GS++RGGLPRFHSP L SKG VRIQGDEFWHM++VLRLG NDRV+LFDG
Sbjct: 71 STAGGSRARGGLPRFHSPTLPSSKGEEVRIQGDEFWHMTRVLRLGINDRVELFDG 125
>emb|CBI25132.3| unnamed protein product [Vitis vinifera]
Length = 410
Score = 89.7 bits (221), Expect = 4e-16
Identities = 47/75 (62%), Positives = 56/75 (74%), Gaps = 2/75 (2%)
Frame = +3
Query: 78 LLCRTWRRGFSGGLRVVPSDAA--GSQSRGGLPRFHSPLLLPSKGNVVRIQGDEFWHMSK 251
LL R+WRR S LR S ++ QSRGGLPRF S +L PSKG +VR+QGDEFWHM+K
Sbjct: 136 LLPRSWRR--STALRSFSSSSSFFSDQSRGGLPRFFSEVLPPSKGGIVRVQGDEFWHMTK 193
Query: 252 VLRLGPNDRVQLFDG 296
VLRL NDRV+LF+G
Sbjct: 194 VLRLSVNDRVELFNG 208
>ref|XP_002271957.1| PREDICTED: ribosomal RNA small subunit methyltransferase E-like
[Vitis vinifera]
Length = 287
Score = 89.7 bits (221), Expect = 4e-16
Identities = 47/75 (62%), Positives = 56/75 (74%), Gaps = 2/75 (2%)
Frame = +3
Query: 78 LLCRTWRRGFSGGLRVVPSDAA--GSQSRGGLPRFHSPLLLPSKGNVVRIQGDEFWHMSK 251
LL R+WRR S LR S ++ QSRGGLPRF S +L PSKG +VR+QGDEFWHM+K
Sbjct: 13 LLPRSWRR--STALRSFSSSSSFFSDQSRGGLPRFFSEVLPPSKGGIVRVQGDEFWHMTK 70
Query: 252 VLRLGPNDRVQLFDG 296
VLRL NDRV+LF+G
Sbjct: 71 VLRLSVNDRVELFNG 85
>dbj|BAJ92836.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 347
Score = 89.0 bits (219), Expect = 6e-16
Identities = 42/55 (76%), Positives = 47/55 (85%)
Frame = +3
Query: 132 SDAAGSQSRGGLPRFHSPLLLPSKGNVVRIQGDEFWHMSKVLRLGPNDRVQLFDG 296
S A S++RGGLPRFHSP L SKG VVRIQGDEFWHM++VLRLG NDRV+LFDG
Sbjct: 84 STAGTSRARGGLPRFHSPSLPSSKGEVVRIQGDEFWHMTRVLRLGINDRVELFDG 138
>ref|XP_006606004.1| PREDICTED: uncharacterized protein LOC100777253 [Glycine max]
Length = 288
Score = 88.2 bits (217), Expect = 1e-15
Identities = 43/72 (59%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
Frame = +3
Query: 87 RTWRRGFSGGLRVVPSDAA--GSQSRGGLPRFHSPLLLPSKGNVVRIQGDEFWHMSKVLR 260
R+W R + S ++ G QSRGGLPRF+S L PSKG+V+R+QGDEFWHM+KVLR
Sbjct: 15 RSWLRNLTVRAMAFSSSSSDYGDQSRGGLPRFYSETLPPSKGSVIRVQGDEFWHMTKVLR 74
Query: 261 LGPNDRVQLFDG 296
L NDRVQLF+G
Sbjct: 75 LTTNDRVQLFNG 86
>gb|ESW15129.1| hypothetical protein PHAVU_007G046900g [Phaseolus vulgaris]
Length = 287
Score = 88.2 bits (217), Expect = 1e-15
Identities = 39/51 (76%), Positives = 46/51 (90%)
Frame = +3
Query: 144 GSQSRGGLPRFHSPLLLPSKGNVVRIQGDEFWHMSKVLRLGPNDRVQLFDG 296
G QSRGGLPRF+S +L PSKG+V+R+QGDEFWHM+KVLRL NDRVQLF+G
Sbjct: 35 GDQSRGGLPRFYSEILPPSKGSVIRVQGDEFWHMTKVLRLSTNDRVQLFNG 85
>ref|XP_003559468.1| PREDICTED: ribosomal RNA small subunit methyltransferase E-like
[Brachypodium distachyon]
Length = 318
Score = 87.8 bits (216), Expect = 1e-15
Identities = 41/55 (74%), Positives = 47/55 (85%)
Frame = +3
Query: 132 SDAAGSQSRGGLPRFHSPLLLPSKGNVVRIQGDEFWHMSKVLRLGPNDRVQLFDG 296
S + S++RGGLPRFHSP L SKG VVRIQGDEFWHM++VLRLG NDRV+LFDG
Sbjct: 59 STSGCSRARGGLPRFHSPSLPSSKGEVVRIQGDEFWHMTRVLRLGVNDRVELFDG 113
>gb|AFK39673.1| unknown [Medicago truncatula]
Length = 280
Score = 85.5 bits (210), Expect = 7e-15
Identities = 38/51 (74%), Positives = 45/51 (88%)
Frame = +3
Query: 144 GSQSRGGLPRFHSPLLLPSKGNVVRIQGDEFWHMSKVLRLGPNDRVQLFDG 296
G QSRGGLPRF+S +L PSKGNV+R++GDEFWHM+KVLRL N RVQLF+G
Sbjct: 34 GDQSRGGLPRFYSEILPPSKGNVIRVKGDEFWHMTKVLRLSTNARVQLFNG 84
>gb|AFW67711.1| hypothetical protein ZEAMMB73_952480 [Zea mays]
Length = 141
Score = 84.3 bits (207), Expect = 2e-14
Identities = 37/52 (71%), Positives = 46/52 (88%)
Frame = +3
Query: 141 AGSQSRGGLPRFHSPLLLPSKGNVVRIQGDEFWHMSKVLRLGPNDRVQLFDG 296
A S++RGGLPRFH+P L SKG V+RIQGDEFWHM++VLRLG ND+V+LF+G
Sbjct: 35 AASRARGGLPRFHAPSLPSSKGEVIRIQGDEFWHMTRVLRLGVNDKVELFNG 86
>ref|XP_006857098.1| hypothetical protein AMTR_s00065p00117290 [Amborella trichopoda]
gi|548861181|gb|ERN18565.1| hypothetical protein
AMTR_s00065p00117290 [Amborella trichopoda]
Length = 295
Score = 82.8 bits (203), Expect = 4e-14
Identities = 38/52 (73%), Positives = 44/52 (84%)
Frame = +3
Query: 141 AGSQSRGGLPRFHSPLLLPSKGNVVRIQGDEFWHMSKVLRLGPNDRVQLFDG 296
+ SQSRGGLPRF S L SKGNVVR+QGDEFWHM+KVLRL NDR++LF+G
Sbjct: 32 SASQSRGGLPRFFSDALPSSKGNVVRVQGDEFWHMTKVLRLNVNDRIELFNG 83
>ref|XP_004230680.1| PREDICTED: ribosomal RNA small subunit methyltransferase E-like
[Solanum lycopersicum]
Length = 285
Score = 82.8 bits (203), Expect = 4e-14
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +3
Query: 63 PLCGGLLCRTWRRGFSGGLRVVPSDAAGSQSRGGLPRFHSPLLLPSKGNVVRIQGDEFWH 242
P LL R+ R + LR S ++ +QSRGGLPRF+S L PSK VVR++GDEFWH
Sbjct: 8 PWLVNLLSRS--RQTTNSLRAFSSSSSSNQSRGGLPRFYSDKLPPSKDGVVRVKGDEFWH 65
Query: 243 MSKVLRLGPNDRVQLFDG 296
M++VLRL +DRV+LFDG
Sbjct: 66 MTRVLRLRIHDRVELFDG 83
>ref|XP_006486891.1| PREDICTED: uncharacterized protein LOC102624062 isoform X1 [Citrus
sinensis]
Length = 289
Score = 82.0 bits (201), Expect = 7e-14
Identities = 36/50 (72%), Positives = 44/50 (88%)
Frame = +3
Query: 147 SQSRGGLPRFHSPLLLPSKGNVVRIQGDEFWHMSKVLRLGPNDRVQLFDG 296
+QSRGGLPRF S +L PSKG +VR++GDEFWHM+KVLRL NDRV+LF+G
Sbjct: 38 NQSRGGLPRFFSQVLPPSKGGIVRVEGDEFWHMTKVLRLSTNDRVELFNG 87
>ref|XP_004496867.1| PREDICTED: ribosomal RNA small subunit methyltransferase E-like
[Cicer arietinum]
Length = 287
Score = 82.0 bits (201), Expect = 7e-14
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = +3
Query: 150 QSRGGLPRFHSPLLLPSKGNVVRIQGDEFWHMSKVLRLGPNDRVQLFDG 296
QSRGGLPRF+S L SKGNV+R++GDEFWHM+KVLRL NDRVQLF+G
Sbjct: 37 QSRGGLPRFYSETLPASKGNVIRVKGDEFWHMTKVLRLSTNDRVQLFNG 85
>ref|XP_003535680.1| PREDICTED: uncharacterized protein LOC100797940 [Glycine max]
Length = 197
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/71 (56%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Frame = +3
Query: 87 RTWRRGFS-GGLRVVPSDAAGSQSRGGLPRFHSPLLLPSKGNVVRIQGDEFWHMSKVLRL 263
R+W R + + + S G Q+RGGLPRF+S L PSKG+V+R+Q DEFWHM+KVLRL
Sbjct: 17 RSWLRNLTVRAMALSSSSDHGDQTRGGLPRFYSETLPPSKGSVIRVQCDEFWHMTKVLRL 76
Query: 264 GPNDRVQLFDG 296
N RVQLF+G
Sbjct: 77 TTNSRVQLFNG 87
>gb|EXB62116.1| Ribosomal RNA small subunit methyltransferase E [Morus notabilis]
Length = 290
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/55 (69%), Positives = 46/55 (83%)
Frame = +3
Query: 132 SDAAGSQSRGGLPRFHSPLLLPSKGNVVRIQGDEFWHMSKVLRLGPNDRVQLFDG 296
S A +Q RGGLPRF S +L +KG+VVR+QGDEFWHM+KVLRLG NDRV+LF+G
Sbjct: 34 SSANSNQYRGGLPRFFSEVLPTTKGSVVRVQGDEFWHMTKVLRLGLNDRVELFNG 88
>gb|EMJ01720.1| hypothetical protein PRUPE_ppa009413mg [Prunus persica]
Length = 294
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/50 (74%), Positives = 43/50 (86%)
Frame = +3
Query: 147 SQSRGGLPRFHSPLLLPSKGNVVRIQGDEFWHMSKVLRLGPNDRVQLFDG 296
+QSRGGLPRF S LL SKG +VR+QGDEFWHM+KVLRL NDRV+LF+G
Sbjct: 43 NQSRGGLPRFFSELLPTSKGGIVRVQGDEFWHMTKVLRLRTNDRVELFNG 92
>ref|XP_004292103.1| PREDICTED: ribosomal RNA small subunit methyltransferase E-like
[Fragaria vesca subsp. vesca]
Length = 289
Score = 79.7 bits (195), Expect = 4e-13
Identities = 44/83 (53%), Positives = 51/83 (61%)
Frame = +3
Query: 48 VAPRLPLCGGLLCRTWRRGFSGGLRVVPSDAAGSQSRGGLPRFHSPLLLPSKGNVVRIQG 227
+AP P L T R FS S +QSRGGLPRF S L SKG +VR+Q
Sbjct: 5 LAPIRPRFTSLRFLTTFRAFSSSSSSSSSSDYSNQSRGGLPRFFSERLPSSKGGLVRVQD 64
Query: 228 DEFWHMSKVLRLGPNDRVQLFDG 296
DEFWHM+KVLRL NDRV+LF+G
Sbjct: 65 DEFWHMTKVLRLRANDRVELFNG 87