BLASTX nr result
ID: Zingiber25_contig00042859
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00042859
(335 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004968614.1| PREDICTED: E3 ubiquitin-protein ligase ATL41... 85 9e-15
ref|XP_002454947.1| hypothetical protein SORBIDRAFT_03g001960 [S... 85 9e-15
dbj|BAK03790.1| predicted protein [Hordeum vulgare subsp. vulgare] 85 1e-14
gb|EPS74383.1| hypothetical protein M569_00375, partial [Genlise... 82 6e-14
ref|XP_003565491.1| PREDICTED: RING-H2 finger protein ATL32-like... 82 6e-14
ref|XP_004966533.1| PREDICTED: RING-H2 finger protein ATL45-like... 82 7e-14
ref|XP_006298646.1| hypothetical protein CARUB_v10014735mg [Caps... 82 7e-14
tpg|DAA52861.1| TPA: putative RING zinc finger domain superfamil... 82 1e-13
ref|XP_003570787.1| PREDICTED: RING-H2 finger protein ATL79-like... 81 1e-13
gb|EAY76605.1| hypothetical protein OsI_04554 [Oryza sativa Indi... 81 1e-13
gb|EMT16971.1| RING-H2 finger protein ATL1B [Aegilops tauschii] 81 2e-13
ref|XP_004953276.1| PREDICTED: RING-H2 finger protein ATL79-like... 80 2e-13
gb|EAY73008.1| hypothetical protein OsI_00881 [Oryza sativa Indi... 80 2e-13
dbj|BAD28071.1| putative RING-H2 zinc finger protein [Oryza sati... 80 3e-13
gb|AFW71720.1| putative RING zinc finger domain superfamily prot... 80 3e-13
gb|EEE57147.1| hypothetical protein OsJ_07055 [Oryza sativa Japo... 80 3e-13
ref|NP_001044902.1| Os01g0866000 [Oryza sativa Japonica Group] g... 80 3e-13
ref|XP_004952687.1| PREDICTED: RING-H2 finger protein ATL78-like... 80 4e-13
ref|NP_001047570.1| Os02g0645000 [Oryza sativa Japonica Group] g... 80 4e-13
ref|XP_002462807.1| hypothetical protein SORBIDRAFT_02g032320 [S... 80 4e-13
>ref|XP_004968614.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Setaria italica]
Length = 228
Score = 85.1 bits (209), Expect = 9e-15
Identities = 36/61 (59%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Frame = -2
Query: 229 GSVVFSGGATA--ECAICLAEMAEGERVRVVPDCGHVFHAMCVDAWLLGRSTCPTCRTDW 56
GS +GGA A +CA+CL+E+A+GE+VR +P CGHVFH CVDAWL R+TCP CR +
Sbjct: 111 GSTSTTGGAAAATDCAVCLSELADGEKVRALPSCGHVFHVECVDAWLRSRTTCPVCRAEV 170
Query: 55 R 53
R
Sbjct: 171 R 171
>ref|XP_002454947.1| hypothetical protein SORBIDRAFT_03g001960 [Sorghum bicolor]
gi|241926922|gb|EES00067.1| hypothetical protein
SORBIDRAFT_03g001960 [Sorghum bicolor]
Length = 435
Score = 85.1 bits (209), Expect = 9e-15
Identities = 33/54 (61%), Positives = 43/54 (79%)
Frame = -2
Query: 214 SGGATAECAICLAEMAEGERVRVVPDCGHVFHAMCVDAWLLGRSTCPTCRTDWR 53
+ A A+CA+CL+E+A+GE+VR +PDCGHVFH CVDAWL R+TCP CR + R
Sbjct: 121 ASAAAADCAVCLSELADGEKVRALPDCGHVFHVDCVDAWLRSRTTCPVCRAEVR 174
Score = 68.2 bits (165), Expect = 1e-09
Identities = 26/47 (55%), Positives = 33/47 (70%)
Frame = -2
Query: 205 ATAECAICLAEMAEGERVRVVPDCGHVFHAMCVDAWLLGRSTCPTCR 65
A AECA+CL + EG+ VR +P C HVFH C+D WL R++CP CR
Sbjct: 328 AAAECAVCLGVLDEGQMVRQLPGCKHVFHQECIDVWLASRASCPVCR 374
>dbj|BAK03790.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 184
Score = 84.7 bits (208), Expect = 1e-14
Identities = 39/74 (52%), Positives = 47/74 (63%)
Frame = -2
Query: 274 DKPLPESAVEIPRLPGSVVFSGGATAECAICLAEMAEGERVRVVPDCGHVFHAMCVDAWL 95
D E +VE G + G AECAICL+E+A+GERVRV+P CGH FH CVD WL
Sbjct: 104 DAATAEFSVEAGAGAGVQLAGGWGDAECAICLSELADGERVRVLPACGHPFHGACVDGWL 163
Query: 94 LGRSTCPTCRTDWR 53
R++CPTCR R
Sbjct: 164 AARASCPTCRAPSR 177
>gb|EPS74383.1| hypothetical protein M569_00375, partial [Genlisea aurea]
Length = 170
Score = 82.4 bits (202), Expect = 6e-14
Identities = 35/69 (50%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Frame = -2
Query: 265 LPESAVE-IPRLPGSVVFSGGATAECAICLAEMAEGERVRVVPDCGHVFHAMCVDAWLLG 89
+ +SAVE +P +P F GG T +C+ICL+E EGE+V+++P CGHVFH +C+D WL
Sbjct: 52 IDKSAVESLPTVP----FGGGTTGDCSICLSEFQEGEKVKLIPYCGHVFHPICIDTWLSA 107
Query: 88 RSTCPTCRT 62
TCP CR+
Sbjct: 108 HVTCPLCRS 116
>ref|XP_003565491.1| PREDICTED: RING-H2 finger protein ATL32-like [Brachypodium
distachyon]
Length = 204
Score = 82.4 bits (202), Expect = 6e-14
Identities = 32/60 (53%), Positives = 45/60 (75%)
Frame = -2
Query: 238 RLPGSVVFSGGATAECAICLAEMAEGERVRVVPDCGHVFHAMCVDAWLLGRSTCPTCRTD 59
R G+ GG ++CA+CL+E+A+G++VR +P+CGHVFH CVDAWL R+TCP CR +
Sbjct: 108 RRAGASAGGGGPDSDCAVCLSELADGDKVRELPNCGHVFHLECVDAWLRSRTTCPLCRAE 167
>ref|XP_004966533.1| PREDICTED: RING-H2 finger protein ATL45-like [Setaria italica]
Length = 191
Score = 82.0 bits (201), Expect = 7e-14
Identities = 36/68 (52%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Frame = -2
Query: 265 LPESAVE-IPRLPGSVVFSGGATAECAICLAEMAEGERVRVVPDCGHVFHAMCVDAWLLG 89
L + A++ +P +P +V A +ECAICLA+ AEG+ +RV+P CGH FH CVDAWL
Sbjct: 82 LKKKAIDALPTVPFAVSSPCSAASECAICLADFAEGDALRVLPRCGHAFHVACVDAWLRT 141
Query: 88 RSTCPTCR 65
R+TCP+CR
Sbjct: 142 RATCPSCR 149
>ref|XP_006298646.1| hypothetical protein CARUB_v10014735mg [Capsella rubella]
gi|482567355|gb|EOA31544.1| hypothetical protein
CARUB_v10014735mg [Capsella rubella]
Length = 187
Score = 82.0 bits (201), Expect = 7e-14
Identities = 35/67 (52%), Positives = 41/67 (61%)
Frame = -2
Query: 265 LPESAVEIPRLPGSVVFSGGATAECAICLAEMAEGERVRVVPDCGHVFHAMCVDAWLLGR 86
LP S GG T ECAICL E AEGE +RV+P CGH FH C+D WL+ R
Sbjct: 80 LPRSTFTAAESASGGAEDGGDTTECAICLTEFAEGEEIRVLPLCGHSFHVACIDKWLVSR 139
Query: 85 STCPTCR 65
S+CP+CR
Sbjct: 140 SSCPSCR 146
>tpg|DAA52861.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 511
Score = 81.6 bits (200), Expect = 1e-13
Identities = 31/54 (57%), Positives = 42/54 (77%)
Frame = -2
Query: 214 SGGATAECAICLAEMAEGERVRVVPDCGHVFHAMCVDAWLLGRSTCPTCRTDWR 53
+G TA+CA+CL+E+A+GE+VR +P C HVFH C+DAWL R+TCP CR + R
Sbjct: 136 AGTGTADCAVCLSELADGEKVRALPGCSHVFHVDCIDAWLRSRTTCPVCRAEVR 189
>ref|XP_003570787.1| PREDICTED: RING-H2 finger protein ATL79-like [Brachypodium
distachyon]
Length = 161
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/73 (53%), Positives = 52/73 (71%), Gaps = 7/73 (9%)
Frame = -2
Query: 262 PESAVEIP-RLPGSVVF-----SGGATAECAICLAEMAEGERVRVVPDCGHVFHAMCVDA 101
P +A+E+P R+P ++V+ +GG AECAICLAE A+G+ VR + C HVFHA C+D
Sbjct: 72 PVAAMEVPPRMPPALVYRSSESAGGEAAECAICLAEFADGDAVRGMAACAHVFHARCIDR 131
Query: 100 WLLG-RSTCPTCR 65
WL G R +CPTCR
Sbjct: 132 WLAGRRPSCPTCR 144
>gb|EAY76605.1| hypothetical protein OsI_04554 [Oryza sativa Indica Group]
Length = 213
Score = 81.3 bits (199), Expect = 1e-13
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = -2
Query: 214 SGGATAECAICLAEMAEGERVRVVPDCGHVFHAMCVDAWLLGRSTCPTCRTD 59
+G + ECAICLAE A+G RVRV+P CGH FHA C+D WL R TCPTCR +
Sbjct: 138 AGCGSTECAICLAEFAQGHRVRVLPRCGHGFHARCIDRWLAARQTCPTCRRE 189
>gb|EMT16971.1| RING-H2 finger protein ATL1B [Aegilops tauschii]
Length = 170
Score = 80.9 bits (198), Expect = 2e-13
Identities = 34/48 (70%), Positives = 37/48 (77%)
Frame = -2
Query: 208 GATAECAICLAEMAEGERVRVVPDCGHVFHAMCVDAWLLGRSTCPTCR 65
G AECAICLAE A G+ VRV+P CGH FHA CVD WLL STCP+CR
Sbjct: 85 GERAECAICLAEFAPGDEVRVLPTCGHGFHAACVDVWLLSNSTCPSCR 132
>ref|XP_004953276.1| PREDICTED: RING-H2 finger protein ATL79-like [Setaria italica]
Length = 172
Score = 80.5 bits (197), Expect = 2e-13
Identities = 35/59 (59%), Positives = 41/59 (69%)
Frame = -2
Query: 229 GSVVFSGGATAECAICLAEMAEGERVRVVPDCGHVFHAMCVDAWLLGRSTCPTCRTDWR 53
G+ A AECAICL+E+A GERVRV+P CGH FH CVD WL R++CPTCR R
Sbjct: 107 GAPAAGAWAEAECAICLSELAGGERVRVLPACGHGFHGACVDGWLAARASCPTCRAPSR 165
>gb|EAY73008.1| hypothetical protein OsI_00881 [Oryza sativa Indica Group]
Length = 237
Score = 80.5 bits (197), Expect = 2e-13
Identities = 31/52 (59%), Positives = 41/52 (78%)
Frame = -2
Query: 214 SGGATAECAICLAEMAEGERVRVVPDCGHVFHAMCVDAWLLGRSTCPTCRTD 59
SG A+CA+CL+E+A+GE+VR +P+C HVFH CVDAWL R+TCP CR +
Sbjct: 122 SGATAADCAVCLSELADGEKVRELPNCRHVFHVECVDAWLRSRTTCPLCRAE 173
>dbj|BAD28071.1| putative RING-H2 zinc finger protein [Oryza sativa Japonica Group]
gi|50252215|dbj|BAD28222.1| putative RING-H2 zinc finger
protein [Oryza sativa Japonica Group]
Length = 202
Score = 80.1 bits (196), Expect = 3e-13
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = -2
Query: 214 SGGATAECAICLAEMAEGERVRVVPDCGHVFHAMCVDAWLLGRSTCPTCR 65
+GG + CAICLA++ GERVRV+P C H FH CVD WLL RSTCPTCR
Sbjct: 126 AGGPSPACAICLADLEPGERVRVLPKCNHGFHVRCVDRWLLARSTCPTCR 175
>gb|AFW71720.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 226
Score = 80.1 bits (196), Expect = 3e-13
Identities = 34/50 (68%), Positives = 37/50 (74%)
Frame = -2
Query: 214 SGGATAECAICLAEMAEGERVRVVPDCGHVFHAMCVDAWLLGRSTCPTCR 65
+GG CAICLAE+ GERVRV+P C H FH CVD WLL RSTCPTCR
Sbjct: 134 AGGGGPVCAICLAELEPGERVRVLPKCNHGFHVRCVDRWLLARSTCPTCR 183
>gb|EEE57147.1| hypothetical protein OsJ_07055 [Oryza sativa Japonica Group]
Length = 213
Score = 80.1 bits (196), Expect = 3e-13
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = -2
Query: 214 SGGATAECAICLAEMAEGERVRVVPDCGHVFHAMCVDAWLLGRSTCPTCR 65
+GG + CAICLA++ GERVRV+P C H FH CVD WLL RSTCPTCR
Sbjct: 137 AGGPSPACAICLADLEPGERVRVLPKCNHGFHVRCVDRWLLARSTCPTCR 186
>ref|NP_001044902.1| Os01g0866000 [Oryza sativa Japonica Group]
gi|56785194|dbj|BAD81912.1| RING-H2 zinc finger
protein-like [Oryza sativa Japonica Group]
gi|113534433|dbj|BAF06816.1| Os01g0866000 [Oryza sativa
Japonica Group] gi|215766335|dbj|BAG98563.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 213
Score = 80.1 bits (196), Expect = 3e-13
Identities = 32/52 (61%), Positives = 39/52 (75%)
Frame = -2
Query: 214 SGGATAECAICLAEMAEGERVRVVPDCGHVFHAMCVDAWLLGRSTCPTCRTD 59
+G + ECAICL+E A+G RVRV+P CGH FHA C+D WL R TCPTCR +
Sbjct: 138 AGCGSTECAICLSEFAQGHRVRVLPRCGHGFHARCIDRWLAARQTCPTCRRE 189
>ref|XP_004952687.1| PREDICTED: RING-H2 finger protein ATL78-like isoform X1 [Setaria
italica] gi|514713157|ref|XP_004952688.1| PREDICTED:
RING-H2 finger protein ATL78-like isoform X2 [Setaria
italica]
Length = 225
Score = 79.7 bits (195), Expect = 4e-13
Identities = 34/49 (69%), Positives = 36/49 (73%)
Frame = -2
Query: 211 GGATAECAICLAEMAEGERVRVVPDCGHVFHAMCVDAWLLGRSTCPTCR 65
GG CAICLAE+ GERVRV+P C H FH CVD WLL RSTCPTCR
Sbjct: 135 GGGGPVCAICLAELEPGERVRVLPKCNHGFHVRCVDRWLLARSTCPTCR 183
>ref|NP_001047570.1| Os02g0645000 [Oryza sativa Japonica Group]
gi|49387614|dbj|BAD25810.1| unknown protein [Oryza
sativa Japonica Group] gi|49388666|dbj|BAD25801.1|
unknown protein [Oryza sativa Japonica Group]
gi|113537101|dbj|BAF09484.1| Os02g0645000 [Oryza sativa
Japonica Group] gi|215766943|dbj|BAG99171.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 197
Score = 79.7 bits (195), Expect = 4e-13
Identities = 36/61 (59%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Frame = -2
Query: 229 GSVVFSGGATAECAICLAEMAEG--ERVRVVPDCGHVFHAMCVDAWLLGRSTCPTCRTDW 56
G + G A AECAICL+E+A+G ERVRV+P CGH FH CVD WL R++CPTCR
Sbjct: 133 GVAMVGGWAEAECAICLSELADGGGERVRVLPACGHGFHGACVDGWLAARASCPTCRAPS 192
Query: 55 R 53
R
Sbjct: 193 R 193
>ref|XP_002462807.1| hypothetical protein SORBIDRAFT_02g032320 [Sorghum bicolor]
gi|241926184|gb|EER99328.1| hypothetical protein
SORBIDRAFT_02g032320 [Sorghum bicolor]
Length = 217
Score = 79.7 bits (195), Expect = 4e-13
Identities = 33/45 (73%), Positives = 36/45 (80%)
Frame = -2
Query: 196 ECAICLAEMAEGERVRVVPDCGHVFHAMCVDAWLLGRSTCPTCRT 62
ECAICLAE A G+ VRV+P CGH FHA CVD WLL STCP+CRT
Sbjct: 118 ECAICLAEFARGDEVRVLPPCGHAFHAACVDTWLLCTSTCPSCRT 162