BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00042854
         (529 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCI55376.1| PH01B035L11.21 [Phyllostachys edulis]                 248   8e-64
gb|AAO37957.1| putative gag-pol polyprotein [Oryza sativa Japoni...   243   1e-62
gb|AAW57789.1| putative polyprotein [Oryza sativa Japonica Group]     243   1e-62
emb|CAE03600.2| OSJNBb0004A17.2 [Oryza sativa Japonica Group]         243   1e-62
gb|ABF94836.1| retrotransposon protein, putative, unclassified [...   243   1e-62
gb|ABF93543.1| retrotransposon protein, putative, unclassified [...   243   1e-62
gb|AAN60494.1| Putative Zea mays retrotransposon Opie-2 [Oryza s...   243   1e-62
gb|AAP53706.1| retrotransposon protein, putative, unclassified [...   243   3e-62
emb|CAE04585.2| OSJNBb0006N15.2 [Oryza sativa Japonica Group]         241   7e-62
gb|ABA98847.1| retrotransposon protein, putative, unclassified [...   239   2e-61
gb|AAT93986.1| putative polyprotein [Oryza sativa Japonica Group]     238   6e-61
gb|AAT76321.1| putative integrase [Oryza sativa Japonica Group] ...   238   6e-61
gb|ABB47538.2| retrotransposon protein, putative, Ty1-copia subc...   238   8e-61
gb|AAK50413.1|AC021891_14 Putative retroelement [Oryza sativa Ja...   238   8e-61
gb|ABA98071.1| retrotransposon protein, putative, unclassified [...   237   1e-60
gb|AAX96493.1| retrotransposon protein, putative, unclassified [...   237   1e-60
gb|AAX96565.1| retrotransposon protein, putative, Ty1-copia sub-...   236   3e-60
gb|AAN40025.1| putative gag-pol polyprotein [Zea mays]                236   3e-60
gb|ABA97696.1| retrotransposon protein, putative, unclassified [...   235   4e-60
gb|ABA98369.1| retrotransposon protein, putative, Ty1-copia subc...   235   5e-60

>emb|CCI55376.1| PH01B035L11.21 [Phyllostachys edulis]
          Length = 2029

 Score =  248 bits (632), Expect = 8e-64
 Identities = 117/176 (66%), Positives = 146/176 (82%)
 Frame = +1

Query: 1    LDYDETYAPVARLESIRLMLAFAAHRGFKLYQMDVKSAFLNGLIKEEVYVEQPPGFVNTE 180
            LD++ET+APVARLE+IR++LAFAA +GFKLYQMDVKSAFLNGLI+EEVYV QPPGF N +
Sbjct: 1547 LDFEETFAPVARLEAIRILLAFAASKGFKLYQMDVKSAFLNGLIEEEVYVRQPPGFENPK 1606

Query: 181  SPNHVFKLKKALYGLKQAPRAWYERLSTYLLEKGFVRGQIDPTLFLRRDGENIFVAQVYV 360
             PNHVFKL KALYGLKQAPRAWYERL +YLL  GF  G++D TLF+RR G +  + Q+YV
Sbjct: 1607 YPNHVFKLSKALYGLKQAPRAWYERLKSYLLSHGFEMGKVDKTLFIRRHGSDFLLVQIYV 1666

Query: 361  DDIICGSNNKGYLNEFITHMESEFEMSLVGELTFFLGLEIKQTRDDIYVHQTKYTQ 528
            DDII G ++   +++F   M SEFEMS++GEL+FFLG +IKQTR+  ++HQ KYT+
Sbjct: 1667 DDIIFGGSSHTLVSQFSDVMSSEFEMSMMGELSFFLGFQIKQTREGTFLHQGKYTR 1722


>gb|AAO37957.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108712101|gb|ABF99896.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1969

 Score =  243 bits (621), Expect = 1e-62
 Identities = 115/176 (65%), Positives = 146/176 (82%)
 Frame = +1

Query: 1    LDYDETYAPVARLESIRLMLAFAAHRGFKLYQMDVKSAFLNGLIKEEVYVEQPPGFVNTE 180
            LD++ET+APVARLE+IR++LAFAA +GFKL+QMDVKSAFLNG+I+EEVYV+QPPGF N +
Sbjct: 1361 LDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVIEEEVYVKQPPGFENPK 1420

Query: 181  SPNHVFKLKKALYGLKQAPRAWYERLSTYLLEKGFVRGQIDPTLFLRRDGENIFVAQVYV 360
             PNHVFKL+KALYGLKQAPRAWYERL T+LL+ GF  G +D TLF    G +  + Q+YV
Sbjct: 1421 FPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTLFTLHSGIDFLLVQIYV 1480

Query: 361  DDIICGSNNKGYLNEFITHMESEFEMSLVGELTFFLGLEIKQTRDDIYVHQTKYTQ 528
            DDII G ++   + +F   M  EFEMS++GELTFFLGL+IKQT++ I+VHQTKY++
Sbjct: 1481 DDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQIKQTKEGIFVHQTKYSK 1536


>gb|AAW57789.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1799

 Score =  243 bits (621), Expect = 1e-62
 Identities = 115/176 (65%), Positives = 145/176 (82%)
 Frame = +1

Query: 1    LDYDETYAPVARLESIRLMLAFAAHRGFKLYQMDVKSAFLNGLIKEEVYVEQPPGFVNTE 180
            LD++ET+APVARLE+IR++LAFAA +GFKL+QMDVKSAFLNG+I+EEVYV+QPPGF N +
Sbjct: 1365 LDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVIEEEVYVKQPPGFENPK 1424

Query: 181  SPNHVFKLKKALYGLKQAPRAWYERLSTYLLEKGFVRGQIDPTLFLRRDGENIFVAQVYV 360
             PNHVFKL KALYGLKQAPRAWYERL T+LL+ GF  G +D TLF    G +  + Q+YV
Sbjct: 1425 FPNHVFKLDKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTLFTLHSGIDFLLVQIYV 1484

Query: 361  DDIICGSNNKGYLNEFITHMESEFEMSLVGELTFFLGLEIKQTRDDIYVHQTKYTQ 528
            DDII G ++   + +F   M  EFEMS++GELTFFLGL+IKQT++ I+VHQTKY++
Sbjct: 1485 DDIIFGGSSHALVAQFFDVMSREFEMSMMGELTFFLGLQIKQTKEGIFVHQTKYSK 1540


>emb|CAE03600.2| OSJNBb0004A17.2 [Oryza sativa Japonica Group]
          Length = 2256

 Score =  243 bits (621), Expect = 1e-62
 Identities = 115/176 (65%), Positives = 146/176 (82%)
 Frame = +1

Query: 1    LDYDETYAPVARLESIRLMLAFAAHRGFKLYQMDVKSAFLNGLIKEEVYVEQPPGFVNTE 180
            LD++ET+APVARLE+IR++LAFAA +GFKL+QMDVKSAFLNG+I+EEVYV+QPPGF N +
Sbjct: 1340 LDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVIEEEVYVKQPPGFENPK 1399

Query: 181  SPNHVFKLKKALYGLKQAPRAWYERLSTYLLEKGFVRGQIDPTLFLRRDGENIFVAQVYV 360
             PNHVFKL+KALYGLKQAPRAWYERL T+LL+ GF  G +D TLF    G +  + Q+YV
Sbjct: 1400 FPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTLFTLHSGIDFLLVQIYV 1459

Query: 361  DDIICGSNNKGYLNEFITHMESEFEMSLVGELTFFLGLEIKQTRDDIYVHQTKYTQ 528
            DDII G ++   + +F   M  EFEMS++GELTFFLGL+IKQT++ I+VHQTKY++
Sbjct: 1460 DDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQIKQTKEGIFVHQTKYSK 1515


>gb|ABF94836.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1948

 Score =  243 bits (621), Expect = 1e-62
 Identities = 115/176 (65%), Positives = 146/176 (82%)
 Frame = +1

Query: 1    LDYDETYAPVARLESIRLMLAFAAHRGFKLYQMDVKSAFLNGLIKEEVYVEQPPGFVNTE 180
            LD++ET+APVARLE+IR++LAFAA +GFKL+QMDVKSAFLNG+I+EEVYV+QPPGF N +
Sbjct: 1340 LDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVIEEEVYVKQPPGFENPK 1399

Query: 181  SPNHVFKLKKALYGLKQAPRAWYERLSTYLLEKGFVRGQIDPTLFLRRDGENIFVAQVYV 360
             PNHVFKL+KALYGLKQAPRAWYERL T+LL+ GF  G +D TLF    G +  + Q+YV
Sbjct: 1400 FPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTLFTLHSGIDFLLVQIYV 1459

Query: 361  DDIICGSNNKGYLNEFITHMESEFEMSLVGELTFFLGLEIKQTRDDIYVHQTKYTQ 528
            DDII G ++   + +F   M  EFEMS++GELTFFLGL+IKQT++ I+VHQTKY++
Sbjct: 1460 DDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQIKQTKEGIFVHQTKYSK 1515


>gb|ABF93543.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2124

 Score =  243 bits (621), Expect = 1e-62
 Identities = 115/176 (65%), Positives = 146/176 (82%)
 Frame = +1

Query: 1    LDYDETYAPVARLESIRLMLAFAAHRGFKLYQMDVKSAFLNGLIKEEVYVEQPPGFVNTE 180
            LD++ET+APVARLE+IR++LAFAA +GFKL+QMDVKSAFLNG+I+EEVYV+QPPGF N +
Sbjct: 1340 LDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVIEEEVYVKQPPGFENPK 1399

Query: 181  SPNHVFKLKKALYGLKQAPRAWYERLSTYLLEKGFVRGQIDPTLFLRRDGENIFVAQVYV 360
             PNHVFKL+KALYGLKQAPRAWYERL T+LL+ GF  G +D TLF    G +  + Q+YV
Sbjct: 1400 FPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTLFTLHSGIDFLLVQIYV 1459

Query: 361  DDIICGSNNKGYLNEFITHMESEFEMSLVGELTFFLGLEIKQTRDDIYVHQTKYTQ 528
            DDII G ++   + +F   M  EFEMS++GELTFFLGL+IKQT++ I+VHQTKY++
Sbjct: 1460 DDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQIKQTKEGIFVHQTKYSK 1515


>gb|AAN60494.1| Putative Zea mays retrotransposon Opie-2 [Oryza sativa Japonica
            Group]
          Length = 2145

 Score =  243 bits (621), Expect = 1e-62
 Identities = 115/176 (65%), Positives = 146/176 (82%)
 Frame = +1

Query: 1    LDYDETYAPVARLESIRLMLAFAAHRGFKLYQMDVKSAFLNGLIKEEVYVEQPPGFVNTE 180
            LD++ET+APVARLE+IR++LAFAA +GFKL+QMDVKSAFLNG+I+EEVYV+QPPGF N +
Sbjct: 1361 LDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVIEEEVYVKQPPGFENPK 1420

Query: 181  SPNHVFKLKKALYGLKQAPRAWYERLSTYLLEKGFVRGQIDPTLFLRRDGENIFVAQVYV 360
             PNHVFKL+KALYGLKQAPRAWYERL T+LL+ GF  G +D TLF    G +  + Q+YV
Sbjct: 1421 FPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTLFTLHSGIDFLLVQIYV 1480

Query: 361  DDIICGSNNKGYLNEFITHMESEFEMSLVGELTFFLGLEIKQTRDDIYVHQTKYTQ 528
            DDII G ++   + +F   M  EFEMS++GELTFFLGL+IKQT++ I+VHQTKY++
Sbjct: 1481 DDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQIKQTKEGIFVHQTKYSK 1536


>gb|AAP53706.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1419

 Score =  243 bits (619), Expect = 3e-62
 Identities = 115/176 (65%), Positives = 142/176 (80%)
 Frame = +1

Query: 1    LDYDETYAPVARLESIRLMLAFAAHRGFKLYQMDVKSAFLNGLIKEEVYVEQPPGFVNTE 180
            LD+DET+APVAR+E+IRL+LAFAA +GFKLYQMDVKSAFLNG I+EEVYV+QPPGF N +
Sbjct: 985  LDFDETFAPVARIEAIRLLLAFAASKGFKLYQMDVKSAFLNGFIQEEVYVKQPPGFENPD 1044

Query: 181  SPNHVFKLKKALYGLKQAPRAWYERLSTYLLEKGFVRGQIDPTLFLRRDGENIFVAQVYV 360
             PNHVFKL KALYGLKQAPRAWY+RL  +LL KGF  G++D TLF+ + G+N    Q+YV
Sbjct: 1045 FPNHVFKLSKALYGLKQAPRAWYDRLKNFLLAKGFTMGKVDKTLFVLKHGDNQLFVQIYV 1104

Query: 361  DDIICGSNNKGYLNEFITHMESEFEMSLVGELTFFLGLEIKQTRDDIYVHQTKYTQ 528
            DDII G +    + +F   M  EFEMS++GEL++FLGL+IKQT    +VHQTKYT+
Sbjct: 1105 DDIIFGCSTHAVVVDFAETMRREFEMSMMGELSYFLGLQIKQTPQGTFVHQTKYTK 1160


>emb|CAE04585.2| OSJNBb0006N15.2 [Oryza sativa Japonica Group]
          Length = 1134

 Score =  241 bits (615), Expect = 7e-62
 Identities = 114/176 (64%), Positives = 141/176 (80%)
 Frame = +1

Query: 1    LDYDETYAPVARLESIRLMLAFAAHRGFKLYQMDVKSAFLNGLIKEEVYVEQPPGFVNTE 180
            LD+DET+APVAR+E+IRL+LAFAA +GFKLYQMDVKSAFLNG I+EEVYV+QPPGF N +
Sbjct: 759  LDFDETFAPVARIEAIRLLLAFAASKGFKLYQMDVKSAFLNGFIQEEVYVKQPPGFENPD 818

Query: 181  SPNHVFKLKKALYGLKQAPRAWYERLSTYLLEKGFVRGQIDPTLFLRRDGENIFVAQVYV 360
             PNHVFKL KALYGLKQAPRAWY+RL  + L KGF  G++D TLF+ + G+N    Q+YV
Sbjct: 819  FPNHVFKLSKALYGLKQAPRAWYDRLKNFFLAKGFTMGKVDKTLFVLKHGDNQLFVQIYV 878

Query: 361  DDIICGSNNKGYLNEFITHMESEFEMSLVGELTFFLGLEIKQTRDDIYVHQTKYTQ 528
            DDII G +    + +F   M  EFEMS++GEL++FLGL+IKQT    +VHQTKYT+
Sbjct: 879  DDIIFGCSTHALVVDFAETMRREFEMSMMGELSYFLGLQIKQTPQGTFVHQTKYTK 934


>gb|ABA98847.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1417

 Score =  239 bits (611), Expect = 2e-61
 Identities = 114/176 (64%), Positives = 141/176 (80%)
 Frame = +1

Query: 1    LDYDETYAPVARLESIRLMLAFAAHRGFKLYQMDVKSAFLNGLIKEEVYVEQPPGFVNTE 180
            LD+DET+APVAR+E+IRL+LAFAA +GFKLYQMDVKSAFLNG I+EEVYV+QPPGF N +
Sbjct: 983  LDFDETFAPVARIEAIRLLLAFAASKGFKLYQMDVKSAFLNGFIQEEVYVKQPPGFENPD 1042

Query: 181  SPNHVFKLKKALYGLKQAPRAWYERLSTYLLEKGFVRGQIDPTLFLRRDGENIFVAQVYV 360
             PNHVFKL KALYGLKQAPRAWY+RL  +LL KGF  G++D TLF+ + G+N    Q+YV
Sbjct: 1043 FPNHVFKLSKALYGLKQAPRAWYDRLKNFLLAKGFTMGKVDKTLFVLKHGDNQLFVQIYV 1102

Query: 361  DDIICGSNNKGYLNEFITHMESEFEMSLVGELTFFLGLEIKQTRDDIYVHQTKYTQ 528
            DDII G +    + +F   M  EFEMS++GEL++FL L+IKQT    +VHQTKYT+
Sbjct: 1103 DDIIFGCSTHALVVDFAETMRREFEMSMMGELSYFLRLQIKQTPQGTFVHQTKYTK 1158


>gb|AAT93986.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1326

 Score =  238 bits (607), Expect = 6e-61
 Identities = 114/175 (65%), Positives = 140/175 (80%)
 Frame = +1

Query: 1    LDYDETYAPVARLESIRLMLAFAAHRGFKLYQMDVKSAFLNGLIKEEVYVEQPPGFVNTE 180
            LD+DET+APVAR+E+IRL+LAFAA +GFKLYQMDVKSAFLNG I+EEVYV+QPPGF N +
Sbjct: 984  LDFDETFAPVARIEAIRLLLAFAASKGFKLYQMDVKSAFLNGFIQEEVYVKQPPGFENPD 1043

Query: 181  SPNHVFKLKKALYGLKQAPRAWYERLSTYLLEKGFVRGQIDPTLFLRRDGENIFVAQVYV 360
             PN VFKL KALYGLKQAPRAWY+RL  +LL KGF  G++D TLF+ + G+N    Q+YV
Sbjct: 1044 FPNLVFKLSKALYGLKQAPRAWYDRLKNFLLAKGFTMGKVDKTLFVLKHGDNQLFVQIYV 1103

Query: 361  DDIICGSNNKGYLNEFITHMESEFEMSLVGELTFFLGLEIKQTRDDIYVHQTKYT 525
            DDII G +    + +F   M  EFEMS++GEL++FLGL+IKQT    +VHQTKYT
Sbjct: 1104 DDIIFGCSTHALVVDFAETMRREFEMSMMGELSYFLGLQIKQTPQGTFVHQTKYT 1158


>gb|AAT76321.1| putative integrase [Oryza sativa Japonica Group]
            gi|108709546|gb|ABF97341.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1425

 Score =  238 bits (607), Expect = 6e-61
 Identities = 112/176 (63%), Positives = 141/176 (80%)
 Frame = +1

Query: 1    LDYDETYAPVARLESIRLMLAFAAHRGFKLYQMDVKSAFLNGLIKEEVYVEQPPGFVNTE 180
            LD+DET+AP+AR+E+IRL+LAFAA +GFKLYQMDVKSAFLNG I+E+VYV+QPPGF N +
Sbjct: 1093 LDFDETFAPIARIEAIRLLLAFAASKGFKLYQMDVKSAFLNGFIQEKVYVKQPPGFENPD 1152

Query: 181  SPNHVFKLKKALYGLKQAPRAWYERLSTYLLEKGFVRGQIDPTLFLRRDGENIFVAQVYV 360
             PNHVFKL KALYGLKQAPR WY+RL  +LL KGF  G++D TLF+ + G+N    Q+YV
Sbjct: 1153 FPNHVFKLSKALYGLKQAPRPWYDRLKNFLLAKGFTMGKVDKTLFVLKHGDNQLFIQIYV 1212

Query: 361  DDIICGSNNKGYLNEFITHMESEFEMSLVGELTFFLGLEIKQTRDDIYVHQTKYTQ 528
            DDII G +    + EF   M  EFEMS++G+L++FLGL+IKQT    +VHQTKYT+
Sbjct: 1213 DDIIFGCSTHALVVEFAETMRREFEMSMMGKLSYFLGLQIKQTPQGTFVHQTKYTK 1268


>gb|ABB47538.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1222

 Score =  238 bits (606), Expect = 8e-61
 Identities = 113/176 (64%), Positives = 141/176 (80%)
 Frame = +1

Query: 1    LDYDETYAPVARLESIRLMLAFAAHRGFKLYQMDVKSAFLNGLIKEEVYVEQPPGFVNTE 180
            L +DET+APVAR+E+IRL+LAFAA +GFKLYQMDVKSAFLNG I EEVYV+QPPGF N++
Sbjct: 877  LYFDETFAPVARIEAIRLLLAFAASKGFKLYQMDVKSAFLNGFIHEEVYVKQPPGFENSD 936

Query: 181  SPNHVFKLKKALYGLKQAPRAWYERLSTYLLEKGFVRGQIDPTLFLRRDGENIFVAQVYV 360
             PNHVFKL KALYGLKQAP AWY+RL  +LL KGF  G++D TLF+ + G+N    Q+YV
Sbjct: 937  FPNHVFKLSKALYGLKQAPMAWYDRLKNFLLAKGFTMGKVDKTLFVLKHGDNQLFVQIYV 996

Query: 361  DDIICGSNNKGYLNEFITHMESEFEMSLVGELTFFLGLEIKQTRDDIYVHQTKYTQ 528
            DDII G +    + +F  +M  EFEMS++GEL++FLGL+IKQT    +VHQTKYT+
Sbjct: 997  DDIIFGYSTHALVVDFAENMRREFEMSMMGELSYFLGLQIKQTPQGTFVHQTKYTK 1052


>gb|AAK50413.1|AC021891_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1232

 Score =  238 bits (606), Expect = 8e-61
 Identities = 113/176 (64%), Positives = 141/176 (80%)
 Frame = +1

Query: 1    LDYDETYAPVARLESIRLMLAFAAHRGFKLYQMDVKSAFLNGLIKEEVYVEQPPGFVNTE 180
            L +DET+APVAR+E+IRL+LAFAA +GFKLYQMDVKSAFLNG I EEVYV+QPPGF N++
Sbjct: 913  LYFDETFAPVARIEAIRLLLAFAASKGFKLYQMDVKSAFLNGFIHEEVYVKQPPGFENSD 972

Query: 181  SPNHVFKLKKALYGLKQAPRAWYERLSTYLLEKGFVRGQIDPTLFLRRDGENIFVAQVYV 360
             PNHVFKL KALYGLKQAP AWY+RL  +LL KGF  G++D TLF+ + G+N    Q+YV
Sbjct: 973  FPNHVFKLSKALYGLKQAPMAWYDRLKNFLLAKGFTMGKVDKTLFVLKHGDNQLFVQIYV 1032

Query: 361  DDIICGSNNKGYLNEFITHMESEFEMSLVGELTFFLGLEIKQTRDDIYVHQTKYTQ 528
            DDII G +    + +F  +M  EFEMS++GEL++FLGL+IKQT    +VHQTKYT+
Sbjct: 1033 DDIIFGYSTHALVVDFAENMRREFEMSMMGELSYFLGLQIKQTPQGTFVHQTKYTK 1088


>gb|ABA98071.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1408

 Score =  237 bits (604), Expect = 1e-60
 Identities = 113/176 (64%), Positives = 139/176 (78%)
 Frame = +1

Query: 1    LDYDETYAPVARLESIRLMLAFAAHRGFKLYQMDVKSAFLNGLIKEEVYVEQPPGFVNTE 180
            LD+DET+APVAR+E+IRL+LAFAA +GFKLYQMDVKSAFLNG I+EEVYV+QPPGF N +
Sbjct: 1029 LDFDETFAPVARIEAIRLLLAFAASKGFKLYQMDVKSAFLNGFIQEEVYVKQPPGFENPD 1088

Query: 181  SPNHVFKLKKALYGLKQAPRAWYERLSTYLLEKGFVRGQIDPTLFLRRDGENIFVAQVYV 360
             PNHVFKL KALYGLKQ PRAWY+RL  +LL K F  G +D TLF+ + G+N    Q+YV
Sbjct: 1089 FPNHVFKLSKALYGLKQTPRAWYDRLKNFLLAKLFTMGNVDKTLFVLKHGDNQLFVQIYV 1148

Query: 361  DDIICGSNNKGYLNEFITHMESEFEMSLVGELTFFLGLEIKQTRDDIYVHQTKYTQ 528
            DDII G +    + +F   M  EFEMS++GEL++FLGL+IKQT    +VHQTKYT+
Sbjct: 1149 DDIIFGCSTHAVVVDFAETMRREFEMSMMGELSYFLGLQIKQTPQGTFVHQTKYTK 1204


>gb|AAX96493.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|77548895|gb|ABA91692.1|
            retrotransposon protein, putative, unclassified,
            expressed [Oryza sativa Japonica Group]
          Length = 1299

 Score =  237 bits (604), Expect = 1e-60
 Identities = 113/176 (64%), Positives = 139/176 (78%)
 Frame = +1

Query: 1    LDYDETYAPVARLESIRLMLAFAAHRGFKLYQMDVKSAFLNGLIKEEVYVEQPPGFVNTE 180
            LD+DET+ PVAR+E+IRL+LAFAA +GFKLYQMDVKSAFLNG I+EEVYV+QPPGF N +
Sbjct: 951  LDFDETFVPVARIEAIRLLLAFAASKGFKLYQMDVKSAFLNGFIQEEVYVKQPPGFENPD 1010

Query: 181  SPNHVFKLKKALYGLKQAPRAWYERLSTYLLEKGFVRGQIDPTLFLRRDGENIFVAQVYV 360
              NHVFKL KALYGLKQAPRAWY+RL  +LL KGF  G++D TLF+ + G+N    Q+YV
Sbjct: 1011 FSNHVFKLSKALYGLKQAPRAWYDRLKNFLLVKGFTMGKVDKTLFVLKHGDNQLFVQIYV 1070

Query: 361  DDIICGSNNKGYLNEFITHMESEFEMSLVGELTFFLGLEIKQTRDDIYVHQTKYTQ 528
            DDII G +    + EF   M  EFEMS++ EL++FLGL+IKQT    +VHQTKYT+
Sbjct: 1071 DDIIFGCSTHALVVEFAETMRREFEMSMMSELSYFLGLQIKQTSQGTFVHQTKYTK 1126


>gb|AAX96565.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77552672|gb|ABA95469.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 709

 Score =  236 bits (601), Expect = 3e-60
 Identities = 112/176 (63%), Positives = 139/176 (78%)
 Frame = +1

Query: 1   LDYDETYAPVARLESIRLMLAFAAHRGFKLYQMDVKSAFLNGLIKEEVYVEQPPGFVNTE 180
           LD+DET+APVAR+E+IR +LAFAA +GFKLYQMDVKSAFLNG I+EEVY++QPPGF N +
Sbjct: 275 LDFDETFAPVARIEAIRHLLAFAASKGFKLYQMDVKSAFLNGFIQEEVYIKQPPGFENPD 334

Query: 181 SPNHVFKLKKALYGLKQAPRAWYERLSTYLLEKGFVRGQIDPTLFLRRDGENIFVAQVYV 360
            PNHVFKL KA YGLKQAPRAWY+RL  +LL KGF  G+ D TLF+ + G+N    Q+YV
Sbjct: 335 FPNHVFKLSKAFYGLKQAPRAWYDRLKNFLLAKGFTMGKFDKTLFVLKHGDNQLFVQIYV 394

Query: 361 DDIICGSNNKGYLNEFITHMESEFEMSLVGELTFFLGLEIKQTRDDIYVHQTKYTQ 528
           DDII G +    + +F   M  EFEMS++GEL++FLGL+IKQT    +VHQTKYT+
Sbjct: 395 DDIIFGCSIHALVVDFAETMRREFEMSMMGELSYFLGLQIKQTPQGTFVHQTKYTK 450


>gb|AAN40025.1| putative gag-pol polyprotein [Zea mays]
          Length = 1892

 Score =  236 bits (601), Expect = 3e-60
 Identities = 113/176 (64%), Positives = 139/176 (78%)
 Frame = +1

Query: 1    LDYDETYAPVARLESIRLMLAFAAHRGFKLYQMDVKSAFLNGLIKEEVYVEQPPGFVNTE 180
            LD+DETYAPVARLESIR++LA+A + GFKLYQMDVKSAFLNG IKEEVYVEQPPGF ++E
Sbjct: 1457 LDFDETYAPVARLESIRILLAYATYHGFKLYQMDVKSAFLNGPIKEEVYVEQPPGFEDSE 1516

Query: 181  SPNHVFKLKKALYGLKQAPRAWYERLSTYLLEKGFVRGQIDPTLFLRRDGENIFVAQVYV 360
             PNHV++L KALYGLKQAPRAWYE L  +L+  GF  G+ DPTLF +    ++FV Q+YV
Sbjct: 1517 YPNHVYRLSKALYGLKQAPRAWYECLRDFLIANGFKVGKADPTLFTKTLENDLFVCQIYV 1576

Query: 361  DDIICGSNNKGYLNEFITHMESEFEMSLVGELTFFLGLEIKQTRDDIYVHQTKYTQ 528
            DDII GS N+    EF   M  +FEMS++GEL +FLG ++KQ R+  ++ QTKYTQ
Sbjct: 1577 DDIIFGSTNESTCEEFSRIMTQKFEMSMMGELKYFLGFQVKQLREGTFISQTKYTQ 1632


>gb|ABA97696.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1514

 Score =  235 bits (600), Expect = 4e-60
 Identities = 112/174 (64%), Positives = 138/174 (79%)
 Frame = +1

Query: 1    LDYDETYAPVARLESIRLMLAFAAHRGFKLYQMDVKSAFLNGLIKEEVYVEQPPGFVNTE 180
            LD+DET++PVAR+E+IRL+LAFAA +GFKLYQMDVKSAFLNG I+EEVYV+QPPGF N  
Sbjct: 1080 LDFDETFSPVARIEAIRLLLAFAASKGFKLYQMDVKSAFLNGFIQEEVYVKQPPGFENPY 1139

Query: 181  SPNHVFKLKKALYGLKQAPRAWYERLSTYLLEKGFVRGQIDPTLFLRRDGENIFVAQVYV 360
             PNHVFKL KALYGLKQAPRAWY+RL  +LL KGF  G++D TLF+ + G+N     +YV
Sbjct: 1140 FPNHVFKLSKALYGLKQAPRAWYDRLKNFLLVKGFTMGKVDKTLFVLKHGDNQLFVHIYV 1199

Query: 361  DDIICGSNNKGYLNEFITHMESEFEMSLVGELTFFLGLEIKQTRDDIYVHQTKY 522
            DDII G +    + +F   M  EFEMS++GEL++FLGL+IKQT    +VHQTKY
Sbjct: 1200 DDIIFGCSTHALVVDFAETMRREFEMSMMGELSYFLGLQIKQTPQGTFVHQTKY 1253


>gb|ABA98369.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 904

 Score =  235 bits (599), Expect = 5e-60
 Identities = 110/173 (63%), Positives = 138/173 (79%)
 Frame = +1

Query: 1    LDYDETYAPVARLESIRLMLAFAAHRGFKLYQMDVKSAFLNGLIKEEVYVEQPPGFVNTE 180
            LD+DET+AP+AR+E+IRL+L FAA +GFKLYQMDVKSAFLNG I+EEVYV+QPPGF N +
Sbjct: 563  LDFDETFAPIARIEAIRLLLTFAASKGFKLYQMDVKSAFLNGFIQEEVYVKQPPGFENPD 622

Query: 181  SPNHVFKLKKALYGLKQAPRAWYERLSTYLLEKGFVRGQIDPTLFLRRDGENIFVAQVYV 360
             PNH+FKL KALYGLKQAPRAWY+RL  +LL KGF  G++D TLF+ + G+N    Q+YV
Sbjct: 623  FPNHIFKLSKALYGLKQAPRAWYDRLKNFLLAKGFTMGKVDKTLFVLKHGDNQLFVQIYV 682

Query: 361  DDIICGSNNKGYLNEFITHMESEFEMSLVGELTFFLGLEIKQTRDDIYVHQTK 519
            DDII G +    + +F   M  EFEMS++GEL++FLGL+IKQT    +VHQTK
Sbjct: 683  DDIIFGCSTHALVVDFAEIMRREFEMSMMGELSYFLGLQIKQTPQGTFVHQTK 735