BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00042783
         (1129 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...   360   8e-97
ref|XP_006350917.1| PREDICTED: pentatricopeptide repeat-containi...   335   2e-89
ref|XP_004241167.1| PREDICTED: pentatricopeptide repeat-containi...   332   2e-88
gb|EMJ07625.1| hypothetical protein PRUPE_ppa001946mg [Prunus pe...   321   3e-85
gb|EXC01449.1| hypothetical protein L484_022020 [Morus notabilis]     318   3e-84
gb|EOY33741.1| Tetratricopeptide repeat (TPR)-like superfamily p...   311   3e-82
ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containi...   308   3e-81
ref|XP_002525630.1| pentatricopeptide repeat-containing protein,...   308   3e-81
ref|XP_004295750.1| PREDICTED: pentatricopeptide repeat-containi...   306   1e-80
emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]   304   5e-80
gb|EPS69071.1| hypothetical protein M569_05691, partial [Genlise...   303   6e-80
ref|XP_006480615.1| PREDICTED: pentatricopeptide repeat-containi...   299   1e-78
ref|XP_006428806.1| hypothetical protein CICLE_v10011151mg [Citr...   299   1e-78
ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containi...   293   9e-77
ref|XP_006575137.1| PREDICTED: pentatricopeptide repeat-containi...   290   6e-76
ref|XP_002314110.1| pentatricopeptide repeat-containing family p...   290   6e-76
ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp....   284   4e-74
ref|NP_180537.1| RNA editing factor OTP81 [Arabidopsis thaliana]...   284   4e-74
ref|XP_006410036.1| hypothetical protein EUTSA_v10016305mg [Eutr...   283   1e-73
gb|AFN53666.1| hypothetical protein [Linum usitatissimum]             276   8e-72

>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  360 bits (923), Expect = 8e-97
 Identities = 187/361 (51%), Positives = 237/361 (65%)
 Frame = +3

Query: 39   LPSFPSSIALPMRASNESNGICVSVNSNGDDHPVLQLLDDYRRLDTRTIHRIHCRMLRLG 218
            L S P S +LP   +   N I ++ +    +HP L L+D     +T+ + +IH +MLR G
Sbjct: 8    LVSLPRSHSLP---TPNPNSITLNNDRYFANHPTLSLIDQCS--ETKQLKQIHAQMLRTG 62

Query: 219  LLHHPFSASRLLVGASLSPSPDLAYARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXX 398
            L   PFSASRL+  A+LSP P L YA+++FD IP PNL++WNTLIRA+A+  +P      
Sbjct: 63   LFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLI 122

Query: 399  XXXXXSDGPDDPDKFTFPFXXXXXXXXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFY 578
                    PD PDKFTFPF                 HGMV+K     SD+FILN+L+HFY
Sbjct: 123  FLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKV-LLGSDVFILNSLIHFY 181

Query: 579  AACGDSGLALRVFDNIPSRDVVSWNSMINAFALGDRWDDALRLFEEMQRENVMPNDVTMV 758
            A CG+ GL  RVF NIP RDVVSWNSMI AF  G   ++AL LF+EM+ +NV PN +TMV
Sbjct: 182  AKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMV 241

Query: 759  SAASICGKKCDLELGRRIHAYIQRNDDIEASSILDNALLDMYVKCGSLEDAELLFHSMNT 938
               S C KK D E GR +H+YI+RN  I  S  L NA+LDMY KCGS+EDA+ LF  M  
Sbjct: 242  GVLSACAKKSDFEFGRWVHSYIERN-RIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPE 300

Query: 939  KDSISWTTMLVGYCKLGHFHAARHLFDQMPDRDIASWNALISCYEQSGRSKEALDLFHDL 1118
            KD +SWTTMLVGY K+G + AA+ +FD MP++DIA+WNALIS YEQ G+ KEAL+LFH+L
Sbjct: 301  KDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHEL 360

Query: 1119 Q 1121
            Q
Sbjct: 361  Q 361



 Score =  110 bits (274), Expect = 1e-21
 Identities = 64/199 (32%), Positives = 108/199 (54%), Gaps = 6/199 (3%)
 Frame = +3

Query: 543  DIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWNSMINAFALGDRWDDALRLFEEMQ 722
            DI    T++  YA  G+   A  +FD +P++D+ +WN++I+A+    +  +AL LF E+Q
Sbjct: 302  DIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQ 361

Query: 723  -RENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRNDDIEASSILDNALLDMYVKCGS 899
              +   P++VT+VS  S C +   ++LG  IH YI++   ++ +  L  +L+DMY KCG 
Sbjct: 362  LSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQG-MKLNCHLTTSLIDMYCKCGD 420

Query: 900  LEDAELLFHSMNTKDSISWTTMLVGYCKLGHFHAARHLFDQMPD-----RDIASWNALIS 1064
            L+ A ++FHS+  KD   W+ M+ G    GH   A  LF +M +       +   N L +
Sbjct: 421  LQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCA 480

Query: 1065 CYEQSGRSKEALDLFHDLQ 1121
            C    G  +E    F+ ++
Sbjct: 481  C-SHVGLVEEGRTFFNQME 498



 Score = 76.6 bits (187), Expect = 2e-11
 Identities = 56/231 (24%), Positives = 93/231 (40%)
 Frame = +3

Query: 294  ARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXXXXXX 473
            A+ +FD++P  ++ +WN LI A+     P                 PD+ T         
Sbjct: 322  AQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACA 381

Query: 474  XXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWN 653
                       H + +K      +  +  +L+  Y  CGD   AL VF ++  +DV  W+
Sbjct: 382  QLGAMDLGGWIH-VYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWS 440

Query: 654  SMINAFALGDRWDDALRLFEEMQRENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRN 833
            +MI   A+     DA+ LF +MQ + V PN VT  +    C     +E GR     ++  
Sbjct: 441  AMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELV 500

Query: 834  DDIEASSILDNALLDMYVKCGSLEDAELLFHSMNTKDSISWTTMLVGYCKL 986
              +         ++D+  + G LE+A  L   M    + S    L+G C +
Sbjct: 501  YGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTI 551


>ref|XP_006350917.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Solanum tuberosum]
          Length = 744

 Score =  335 bits (859), Expect = 2e-89
 Identities = 170/332 (51%), Positives = 222/332 (66%)
 Frame = +3

Query: 126  DDHPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFSASRLLVGASLSPSPDLAYARRL 305
            ++HP++ L+D  + +  + + +IH  MLR+GL   PFSAS+L+  +SLS    L YA ++
Sbjct: 34   ENHPLVLLIDKCQSI--KQLKQIHAYMLRIGLFSDPFSASKLIEASSLSHFSSLDYAHKV 91

Query: 306  FDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXXXXXXXXXX 485
            FD IP PNLFSWN LIRA+++  DP            +G + P KFT+PF          
Sbjct: 92   FDEIPQPNLFSWNALIRAYSSSQDPIQSILMFVNMICEGREFPSKFTYPFVFKASAKMKA 151

Query: 486  XXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWNSMIN 665
                   HGMVVK      DIF+LN+L+HFYA CG    A  VF+N+ +RDVVSWN+MI 
Sbjct: 152  LRFGRGLHGMVVKGRDVGLDIFVLNSLIHFYADCGCLDEAYLVFENMQTRDVVSWNTMIL 211

Query: 666  AFALGDRWDDALRLFEEMQRENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRNDDIE 845
             FA G   D+AL++F  M  ENV PN VTM++  S CGKK DLE GR +H +I+RN  I 
Sbjct: 212  GFAEGGYADEALKMFHRMGEENVRPNGVTMMAVLSACGKKLDLEFGRWVHVFIKRNG-IR 270

Query: 846  ASSILDNALLDMYVKCGSLEDAELLFHSMNTKDSISWTTMLVGYCKLGHFHAARHLFDQM 1025
             S ILDNA+LDMY+KCGS+EDAE LFH M  KD +SWTTMLVGY + G+F+AAR + + M
Sbjct: 271  ESLILDNAILDMYMKCGSIEDAERLFHKMGEKDIVSWTTMLVGYARAGNFNAARSILNTM 330

Query: 1026 PDRDIASWNALISCYEQSGRSKEALDLFHDLQ 1121
            P +DIA+WNALIS YEQSG+ KEAL +F++LQ
Sbjct: 331  PSQDIAAWNALISAYEQSGKPKEALSVFNELQ 362



 Score = 95.1 bits (235), Expect = 5e-17
 Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 1/195 (0%)
 Frame = +3

Query: 543  DIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWNSMINAFALGDRWDDALRLFEEMQ 722
            DI    T++  YA  G+   A  + + +PS+D+ +WN++I+A+    +  +AL +F E+Q
Sbjct: 303  DIVSWTTMLVGYARAGNFNAARSILNTMPSQDIAAWNALISAYEQSGKPKEALSVFNELQ 362

Query: 723  R-ENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRNDDIEASSILDNALLDMYVKCGS 899
              +   P++VT+V A S C +   ++LG  IH YI++   I+ +  L  AL+DMY KCG 
Sbjct: 363  LIKKAEPDEVTLVCALSACAQLGAIDLGGWIHVYIKKQG-IKLNCHLTTALIDMYSKCGD 421

Query: 900  LEDAELLFHSMNTKDSISWTTMLVGYCKLGHFHAARHLFDQMPDRDIASWNALISCYEQS 1079
            +E A                                 +FD +  RD+  W+A+++     
Sbjct: 422  VEKA-------------------------------LEMFDSVNIRDVFVWSAMVAGLAMH 450

Query: 1080 GRSKEALDLFHDLQQ 1124
            GR KEA+ LF  +Q+
Sbjct: 451  GRGKEAISLFLKMQE 465



 Score = 93.2 bits (230), Expect = 2e-16
 Identities = 69/271 (25%), Positives = 118/271 (43%), Gaps = 4/271 (1%)
 Frame = +3

Query: 294  ARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXXXXXX 473
            AR + +++P  ++ +WN LI A+     P                +PD+ T         
Sbjct: 323  ARSILNTMPSQDIAAWNALISAYEQSGKPKEALSVFNELQLIKKAEPDEVTLVCALSACA 382

Query: 474  XXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWN 653
                       H + +K      +  +   L+  Y+ CGD   AL +FD++  RDV  W+
Sbjct: 383  QLGAIDLGGWIH-VYIKKQGIKLNCHLTTALIDMYSKCGDVEKALEMFDSVNIRDVFVWS 441

Query: 654  SMINAFALGDRWDDALRLFEEMQRENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRN 833
            +M+   A+  R  +A+ LF +MQ   V PN VT+++    C     +E GR I   ++  
Sbjct: 442  AMVAGLAMHGRGKEAISLFLKMQEHKVKPNSVTLINVLCACSHSGLVEEGREIFNQMENI 501

Query: 834  DDIEASSILDNALLDMYVKCGSLEDAELLFHSMNTKDSISWTTMLVGYCKL-GHFHAARH 1010
              I         L+D+  + G LE+AE L ++M      S    L+G CKL G+   A  
Sbjct: 502  YGIVPGVKHYACLVDILGRAGELEEAEELINNMPVTPGPSVWGALLGACKLHGNLELAEQ 561

Query: 1011 LFDQMPDRDIASWNA---LISCYEQSGRSKE 1094
              +++ + +  +  A   L + Y +SG+  E
Sbjct: 562  ACNRLVELEPENHGAYVLLSNIYAKSGKWDE 592


>ref|XP_004241167.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Solanum lycopersicum]
          Length = 744

 Score =  332 bits (850), Expect = 2e-88
 Identities = 168/332 (50%), Positives = 221/332 (66%)
 Frame = +3

Query: 126  DDHPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFSASRLLVGASLSPSPDLAYARRL 305
            ++HP++ L+D  + ++   + +IH  MLR+GL   PFSAS+L+  +SLS    L YA ++
Sbjct: 34   ENHPLVLLIDKSQSINQ--LKQIHAYMLRIGLFFDPFSASKLIEASSLSHFSSLDYAHKV 91

Query: 306  FDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXXXXXXXXXX 485
            FD IP PNLFSWN LIRA+++  DP            +G + P KFT+PF          
Sbjct: 92   FDEIPQPNLFSWNALIRAYSSSQDPIQSILMFVNMLCEGREFPSKFTYPFVFKASAKMKA 151

Query: 486  XXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWNSMIN 665
                   HGMVVK      DIF+LN+L+HFYA CG    A  +F+N+ +RDVVSWN+MI 
Sbjct: 152  IRFGRGLHGMVVKGRDVGLDIFVLNSLIHFYADCGCLDEAYLIFENMQTRDVVSWNTMIL 211

Query: 666  AFALGDRWDDALRLFEEMQRENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRNDDIE 845
             FA G   D+AL++F  M  ENV PNDVTM++  S C KK DLE GR +HA+I+RN  I 
Sbjct: 212  GFAEGGYADEALKIFHRMGEENVRPNDVTMMAVLSACAKKLDLEFGRWVHAFIKRNG-IR 270

Query: 846  ASSILDNALLDMYVKCGSLEDAELLFHSMNTKDSISWTTMLVGYCKLGHFHAARHLFDQM 1025
             S ILDNA+LDMY+KCGS+EDAE LF  M  KD +SWTTMLVGY + G+F+AAR + + M
Sbjct: 271  ESLILDNAILDMYMKCGSIEDAERLFRKMGEKDIVSWTTMLVGYARAGNFNAARSILNTM 330

Query: 1026 PDRDIASWNALISCYEQSGRSKEALDLFHDLQ 1121
            P +DI +WNALIS YEQSG+ KEAL +F++LQ
Sbjct: 331  PSQDIVAWNALISAYEQSGKPKEALSVFNELQ 362



 Score = 96.7 bits (239), Expect = 2e-17
 Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 1/195 (0%)
 Frame = +3

Query: 543  DIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWNSMINAFALGDRWDDALRLFEEMQ 722
            DI    T++  YA  G+   A  + + +PS+D+V+WN++I+A+    +  +AL +F E+Q
Sbjct: 303  DIVSWTTMLVGYARAGNFNAARSILNTMPSQDIVAWNALISAYEQSGKPKEALSVFNELQ 362

Query: 723  R-ENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRNDDIEASSILDNALLDMYVKCGS 899
              +   P++VT+V A S C +   ++LG  IH YI++   I+ +  L  AL+DMY KCG 
Sbjct: 363  LIKKAEPDEVTLVCALSACAQLGAIDLGGWIHVYIKKQG-IKFNCHLTTALIDMYSKCGD 421

Query: 900  LEDAELLFHSMNTKDSISWTTMLVGYCKLGHFHAARHLFDQMPDRDIASWNALISCYEQS 1079
            +E A                                 +FD +  RD+  W+A+I+     
Sbjct: 422  VEKA-------------------------------LEMFDSVNIRDVFVWSAMIAGLAMH 450

Query: 1080 GRSKEALDLFHDLQQ 1124
            GR KEA+ LF  +Q+
Sbjct: 451  GRGKEAISLFLKMQE 465



 Score = 90.1 bits (222), Expect = 1e-15
 Identities = 69/271 (25%), Positives = 117/271 (43%), Gaps = 4/271 (1%)
 Frame = +3

Query: 294  ARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXXXXXX 473
            AR + +++P  ++ +WN LI A+     P                +PD+ T         
Sbjct: 323  ARSILNTMPSQDIVAWNALISAYEQSGKPKEALSVFNELQLIKKAEPDEVTLVCALSACA 382

Query: 474  XXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWN 653
                       H + +K      +  +   L+  Y+ CGD   AL +FD++  RDV  W+
Sbjct: 383  QLGAIDLGGWIH-VYIKKQGIKFNCHLTTALIDMYSKCGDVEKALEMFDSVNIRDVFVWS 441

Query: 654  SMINAFALGDRWDDALRLFEEMQRENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRN 833
            +MI   A+  R  +A+ LF +MQ   V PN VT+++    C     +E GR I   ++  
Sbjct: 442  AMIAGLAMHGRGKEAISLFLKMQEHKVKPNSVTLINVLCACSHSGLVEEGRAIFNQMEYV 501

Query: 834  DDIEASSILDNALLDMYVKCGSLEDAELLFHSMNTKDSISWTTMLVGYCKL-GHFHAARH 1010
              I         L+D+  + G LE AE L ++M      S    L+G C+L G+   A  
Sbjct: 502  YGIVPGVKHYACLVDILGRAGELEVAEKLINNMPVTPGPSVWGALLGACRLHGNLELAEQ 561

Query: 1011 LFDQMPDRDIASWNA---LISCYEQSGRSKE 1094
              +++ + +  +  A   L + Y +SG+  E
Sbjct: 562  ACNRLVELEPENHGAYVLLSNIYAKSGKWDE 592


>gb|EMJ07625.1| hypothetical protein PRUPE_ppa001946mg [Prunus persica]
          Length = 738

 Score =  321 bits (823), Expect = 3e-85
 Identities = 169/356 (47%), Positives = 230/356 (64%)
 Frame = +3

Query: 60   IALPMRASNESNGICVSVNSNGDDHPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFS 239
            I+LP   ++ S     S +     HP L L+D    +  + + ++H +MLR G+L  P+S
Sbjct: 9    ISLPRHPNSSSPTF--STDLRFSSHPALSLIDQCTSI--KQLKQVHAQMLRTGVLFDPYS 64

Query: 240  ASRLLVGASLSPSPDLAYARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSD 419
            AS+L+  ++LS    L YAR++FD IP PN+++WNTLIRA+A+  DP             
Sbjct: 65   ASKLITASALSSFSSLDYARQVFDQIPQPNVYTWNTLIRAYASSSDPAESILVFLDMLDH 124

Query: 420  GPDDPDKFTFPFXXXXXXXXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSG 599
              + PDK+T+PF                 HGM +K+    SDI+ILN+LVHFY +CGD  
Sbjct: 125  CSECPDKYTYPFAIKAASELRALQVGRGFHGMAIKASL-GSDIYILNSLVHFYGSCGDLD 183

Query: 600  LALRVFDNIPSRDVVSWNSMINAFALGDRWDDALRLFEEMQRENVMPNDVTMVSAASICG 779
            LA RVF   P +DVVSWNSMI  FA G+   +AL LF+EM+ ENV PNDVTMVS  S C 
Sbjct: 184  LARRVFMKTPKKDVVSWNSMITVFAQGNCPQEALELFKEMEAENVKPNDVTMVSVLSACA 243

Query: 780  KKCDLELGRRIHAYIQRNDDIEASSILDNALLDMYVKCGSLEDAELLFHSMNTKDSISWT 959
            KK DLE GR + ++IQRN +I+ +  L+NA+LDMYVKCGS++DA+ LF  M  KD +SWT
Sbjct: 244  KKVDLEFGRWVCSHIQRN-EIKENLTLNNAMLDMYVKCGSVDDAKRLFDRMPEKDIVSWT 302

Query: 960  TMLVGYCKLGHFHAARHLFDQMPDRDIASWNALISCYEQSGRSKEALDLFHDLQQA 1127
            TML GY +LG++  A  +F  MP +DIA+WN LIS YEQSG+ KEAL +F++LQ++
Sbjct: 303  TMLDGYAQLGNYEEAWRVFAAMPSQDIAAWNVLISSYEQSGKPKEALAVFNELQKS 358



 Score = 83.2 bits (204), Expect = 2e-13
 Identities = 68/283 (24%), Positives = 117/283 (41%), Gaps = 5/283 (1%)
 Frame = +3

Query: 294  ARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXXXXXX 473
            A R+F ++P  ++ +WN LI ++     P                 PD+ T         
Sbjct: 317  AWRVFAAMPSQDIAAWNVLISSYEQSGKPKEALAVFNELQKSKSPKPDEVTLVSTLAACA 376

Query: 474  XXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWN 653
                       H + +K      +  +  +L+  YA CGD   AL VF+++  RDV  W+
Sbjct: 377  QLGAIDLGGWIH-VYIKKQVMKLNCHLTTSLIDMYAKCGDLDKALEVFNSVERRDVFVWS 435

Query: 654  SMINAFALGDRWDDALRLFEEMQRENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRN 833
            +MI   A+  +  DAL  F +M    V PN VT  +    C     ++ GR     ++  
Sbjct: 436  AMIAGLAMHGQGRDALEFFSKMLEAKVKPNAVTFTNVLCACSHTGLVDEGRTFFYQMEPV 495

Query: 834  DDIEASSILDNALLDMYVKCGSLEDAELLFHSMNTKDSISWTTMLVGYCKL-GHF----H 998
              +         ++D+  + G+L++A  L   M    + S    L+G CKL G+      
Sbjct: 496  YGVVPGIKHYACMVDILGRSGNLDEAVELIEKMPIPPTASVWGALLGACKLHGNVVLAEK 555

Query: 999  AARHLFDQMPDRDIASWNALISCYEQSGRSKEALDLFHDLQQA 1127
            A  HL +  P R+  ++  L + Y ++G+  E   L   ++ A
Sbjct: 556  ACSHLLELDP-RNHGAYVLLSNIYAETGKWDEVSGLRKHMRDA 597


>gb|EXC01449.1| hypothetical protein L484_022020 [Morus notabilis]
          Length = 739

 Score =  318 bits (814), Expect = 3e-84
 Identities = 166/360 (46%), Positives = 229/360 (63%), Gaps = 4/360 (1%)
 Frame = +3

Query: 54   SSIALPMRASNESNGICVSVNSNGD----DHPVLQLLDDYRRLDTRTIHRIHCRMLRLGL 221
            +++++P+ +      +  S   N D    ++P+L L++    L  + + +IH +MLR GL
Sbjct: 2    AALSVPVLSFPHQRKLPTSSTVNNDLRFPNYPLLSLIEQCTSL--KELKQIHAQMLRTGL 59

Query: 222  LHHPFSASRLLVGASLSPSPDLAYARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXX 401
               PFSAS+L+   ++S    L YA ++FD IP PNL++WNT+IRA+A+  DP       
Sbjct: 60   FFDPFSASKLITVCAMSSFSSLDYAHQVFDQIPKPNLYTWNTIIRAYASSSDPIQSIVVF 119

Query: 402  XXXXSDGPDDPDKFTFPFXXXXXXXXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYA 581
                    + P+K+T+PF                 HGMV+KS   +SD+FILN+LVHFY 
Sbjct: 120  LRMLDQCCESPNKYTYPFVLKAASELKASRVGRGFHGMVMKSSL-ASDVFILNSLVHFYG 178

Query: 582  ACGDSGLALRVFDNIPSRDVVSWNSMINAFALGDRWDDALRLFEEMQRENVMPNDVTMVS 761
            +C D   A RVF NIPS+DVVSWNSMI AF  GD  D+A +LF EM+ EN+ PND+TMV 
Sbjct: 179  SCDDLDSAYRVFLNIPSKDVVSWNSMIKAFVEGDCPDEAFQLFREMEMENLKPNDITMVG 238

Query: 762  AASICGKKCDLELGRRIHAYIQRNDDIEASSILDNALLDMYVKCGSLEDAELLFHSMNTK 941
                CGKK D+E GR + +YIQRN  I  +  L+NA+LDMYVKCGS+EDA+ LF  M  +
Sbjct: 239  VLCACGKKADIEFGRWLCSYIQRN-GIAVNLTLNNAMLDMYVKCGSVEDAKELFDKMPER 297

Query: 942  DSISWTTMLVGYCKLGHFHAARHLFDQMPDRDIASWNALISCYEQSGRSKEALDLFHDLQ 1121
            D +SWTTML GY ++G +  A  +F+ MP++DIA+WN LIS YEQ+G  KEAL +FH LQ
Sbjct: 298  DVVSWTTMLDGYTRMGKYDEALRVFEAMPNQDIAAWNVLISSYEQNGMPKEALSVFHKLQ 357



 Score =  100 bits (250), Expect = 8e-19
 Identities = 76/314 (24%), Positives = 132/314 (42%), Gaps = 32/314 (10%)
 Frame = +3

Query: 282  DLAYARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXX 461
            DL  A R+F +IP  ++ SWN++I+A   G  P            +    P+  T     
Sbjct: 182  DLDSAYRVFLNIPSKDVVSWNSMIKAFVEGDCPDEAFQLFREMEMENLK-PNDITMVGVL 240

Query: 462  XXXXXXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIPSRDV 641
                              + ++   + ++ + N ++  Y  CG    A  +FD +P RDV
Sbjct: 241  CACGKKADIEFGRWLCSYIQRNGI-AVNLTLNNAMLDMYVKCGSVEDAKELFDKMPERDV 299

Query: 642  VSWNSMINAFALGDRWDDALRLFEEMQRENVM---------------------------- 737
            VSW +M++ +    ++D+ALR+FE M  +++                             
Sbjct: 300  VSWTTMLDGYTRMGKYDEALRVFEAMPNQDIAAWNVLISSYEQNGMPKEALSVFHKLQVS 359

Query: 738  ----PNDVTMVSAASICGKKCDLELGRRIHAYIQRNDDIEASSILDNALLDMYVKCGSLE 905
                P++VT+VS+ S C +   ++ GR IH YI+R   I+ +  L  +L+DMY KCG LE
Sbjct: 360  KSAKPDEVTLVSSLSACSQLGSIDPGRWIHIYIKRQG-IKLNCHLTTSLIDMYAKCGDLE 418

Query: 906  DAELLFHSMNTKDSISWTTMLVGYCKLGHFHAARHLFDQMPDRDIASWNALISCYEQSGR 1085
                                            A  +FD +  +D+  W+A+I+     G 
Sbjct: 419  K-------------------------------ALEVFDSVERKDVYVWSAMIAGLAMHGC 447

Query: 1086 SKEALDLFHDLQQA 1127
             + A+DLF+++ +A
Sbjct: 448  GRAAIDLFYEMLKA 461



 Score = 77.8 bits (190), Expect = 7e-12
 Identities = 62/257 (24%), Positives = 104/257 (40%), Gaps = 1/257 (0%)
 Frame = +3

Query: 294  ARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXXXXXX 473
            A R+F+++P  ++ +WN LI ++     P                 PD+ T         
Sbjct: 318  ALRVFEAMPNQDIAAWNVLISSYEQNGMPKEALSVFHKLQVSKSAKPDEVTLVSSLSACS 377

Query: 474  XXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWN 653
                       H + +K      +  +  +L+  YA CGD   AL VFD++  +DV  W+
Sbjct: 378  QLGSIDPGRWIH-IYIKRQGIKLNCHLTTSLIDMYAKCGDLEKALEVFDSVERKDVYVWS 436

Query: 654  SMINAFALGDRWDDALRLFEEMQRENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRN 833
            +MI   A+      A+ LF EM +  V PN VT  +    C     LE G  +   ++  
Sbjct: 437  AMIAGLAMHGCGRAAIDLFYEMLKAKVKPNAVTFTNILCACSHTGLLEEGTSLFYQMEPV 496

Query: 834  DDIEASSILDNALLDMYVKCGSLEDAELLFHSMNTKDSISWTTMLVGYCKL-GHFHAARH 1010
              +         ++DM  + G L+D+      M    + S    L+G C+L G+   A H
Sbjct: 497  YKVVPGVKHYACMVDMLGRSGRLKDSLEFIEKMPIPPTASIWGALLGACRLHGNVELAEH 556

Query: 1011 LFDQMPDRDIASWNALI 1061
               Q+ + D  +  A +
Sbjct: 557  ACGQLLELDPRNHGAYV 573


>gb|EOY33741.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
            cacao]
          Length = 733

 Score =  311 bits (797), Expect = 3e-82
 Identities = 164/338 (48%), Positives = 216/338 (63%)
 Frame = +3

Query: 108  SVNSNGDDHPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFSASRLLVGASLSPSPDL 287
            +VN++ DD PVL  ++    L+   + +IH +MLR GL  +P+SAS+L   ++LSP   L
Sbjct: 19   TVNNDHDD-PVLSRINQCTNLNQ--LKQIHAQMLRTGLFFNPYSASKLFAASALSPFSSL 75

Query: 288  AYARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXXXX 467
             YAR++FD IP PNL++WNTLIR +A+GP+P            + P  P+KFTFPF    
Sbjct: 76   DYARKVFDQIPKPNLYTWNTLIRVYASGPEPLQGILIFLRMVDESPYYPNKFTFPFVIKA 135

Query: 468  XXXXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVS 647
                         HGMV+K+    +D+FI N+L+H Y +CGD   A RVF  I  +DVVS
Sbjct: 136  AAEIVSVCVGQALHGMVIKASL-GADVFISNSLIHLYLSCGDLDSAYRVFMMIGEKDVVS 194

Query: 648  WNSMINAFALGDRWDDALRLFEEMQRENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQ 827
            WNS+I   A     + AL LF  M  E+V PNDVTMV   S C KK DLE GR + +YI+
Sbjct: 195  WNSLITGLAQKGCAEKALELFRRMDAESVKPNDVTMVGVLSACTKKLDLEFGRWVCSYIE 254

Query: 828  RNDDIEASSILDNALLDMYVKCGSLEDAELLFHSMNTKDSISWTTMLVGYCKLGHFHAAR 1007
            RN  I  +  L NA+LDMY KCGSLEDA+ LF  M  KD ++WTTML GY KLG + AAR
Sbjct: 255  RNG-ISVNLTLSNAMLDMYAKCGSLEDAKRLFDMMEEKDIVTWTTMLDGYAKLGEYEAAR 313

Query: 1008 HLFDQMPDRDIASWNALISCYEQSGRSKEALDLFHDLQ 1121
             + D MP +DIA+WNALIS YEQ+G+ KEAL ++H+L+
Sbjct: 314  RVLDIMPRQDIAAWNALISGYEQNGKPKEALAIYHELK 351



 Score = 71.2 bits (173), Expect = 7e-10
 Identities = 61/268 (22%), Positives = 104/268 (38%), Gaps = 4/268 (1%)
 Frame = +3

Query: 294  ARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXXXXXX 473
            ARR+ D +P  ++ +WN LI  +     P                 PD+ T         
Sbjct: 312  ARRVLDIMPRQDIAAWNALISGYEQNGKPKEALAIYHELKLSKIAKPDEITLVSTLSACA 371

Query: 474  XXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWN 653
                       H  V K      +  +  +L+  Y+ CGD   AL VF ++  RDV  W+
Sbjct: 372  QLGAMDIGRGIHAYV-KEQGIQLNCHLTTSLIDMYSKCGDVNKALEVFYSVERRDVFVWS 430

Query: 654  SMINAFALGDRWDDALRLFEEMQRENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRN 833
            +MI   A+      A+ LF  MQ   + PN VT  +    C     ++ G+     ++  
Sbjct: 431  AMIAGLAMHGHGRAAIDLFSRMQEATMKPNSVTFTNVLCACSHAGLVKEGKTFLNQMEPV 490

Query: 834  DDIEASSILDNALLDMYVKCGSLEDAELLFHSMNTKDSISWTTMLVGYCKL-GHFHAARH 1010
              I       + ++D+  + G  E+A      M    S S    L+G C++ G+   A  
Sbjct: 491  YGIPPEVQHYSCMVDILGRAGRFEEAVEFIEKMPIVPSDSVWGALLGACQIHGNVELAEK 550

Query: 1011 LFDQMPDRDIASWNA---LISCYEQSGR 1085
               ++ + D  +  A   L + Y ++G+
Sbjct: 551  ACSRLLELDPGNHGAYVLLSNVYAKTGK 578


>ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Cucumis sativus]
            gi|449470513|ref|XP_004152961.1| PREDICTED:
            pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Cucumis sativus]
            gi|449523079|ref|XP_004168552.1| PREDICTED:
            pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  308 bits (789), Expect = 3e-81
 Identities = 162/331 (48%), Positives = 211/331 (63%)
 Frame = +3

Query: 129  DHPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFSASRLLVGASLSPSPDLAYARRLF 308
            +H +L  +D  +   ++ +  +H RMLR GL   PFSAS+L   ++LS    L YAR LF
Sbjct: 25   NHQILSTID--KCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLF 82

Query: 309  DSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXXXXXXXXXXX 488
            D IP PNL++WNTLIRA+A+  DP               D P+KFTFPF           
Sbjct: 83   DQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKAS 142

Query: 489  XXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWNSMINA 668
                  HGM +K  F   D++ILN+LV FY ACGD  +A R+F  I  +DVVSWNSMI+A
Sbjct: 143  RVGTAVHGMAIKLSF-GMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISA 201

Query: 669  FALGDRWDDALRLFEEMQRENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRNDDIEA 848
            FA G+  +DAL LF +M+RENVMPN VTMV   S C KK DLE GR + +YI+R   I+ 
Sbjct: 202  FAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERK-GIKV 260

Query: 849  SSILDNALLDMYVKCGSLEDAELLFHSMNTKDSISWTTMLVGYCKLGHFHAARHLFDQMP 1028
               L NA+LDMY KCGS++DA+ LF  M  +D  SWT ML GY K+G + AAR +F+ MP
Sbjct: 261  DLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMP 320

Query: 1029 DRDIASWNALISCYEQSGRSKEALDLFHDLQ 1121
             ++IA+WN LIS YEQ+G+ KEAL +F++LQ
Sbjct: 321  VKEIAAWNVLISAYEQNGKPKEALAIFNELQ 351



 Score =  108 bits (269), Expect = 5e-21
 Identities = 65/199 (32%), Positives = 108/199 (54%), Gaps = 6/199 (3%)
 Frame = +3

Query: 543  DIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWNSMINAFALGDRWDDALRLFEEMQ 722
            D+F    ++  YA  GD   A  VF+ +P +++ +WN +I+A+    +  +AL +F E+Q
Sbjct: 292  DVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQ 351

Query: 723  RENVM-PNDVTMVSAASICGKKCDLELGRRIHAYIQRNDDIEASSILDNALLDMYVKCGS 899
               +  P++VT+VS  S C +   ++LG  IH YI+R + I  +  L ++L+DMY KCGS
Sbjct: 352  LSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKR-EGIVLNCHLISSLVDMYAKCGS 410

Query: 900  LEDAELLFHSMNTKDSISWTTMLVGYCKLGHFHAARHLFDQMPD-----RDIASWNALIS 1064
            LE A  +F+S+  +D   W+ M+ G    G   AA  LF +M +       +   N L +
Sbjct: 411  LEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCA 470

Query: 1065 CYEQSGRSKEALDLFHDLQ 1121
            C   +G   E    FH+++
Sbjct: 471  C-SHAGLVDEGRVFFHEME 488



 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 61/235 (25%), Positives = 96/235 (40%)
 Frame = +3

Query: 282  DLAYARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXX 461
            D   AR +F+++P   + +WN LI A+     P                 PD+ T     
Sbjct: 308  DYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTL 367

Query: 462  XXXXXXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIPSRDV 641
                           H + +K      +  ++++LV  YA CG    AL VF ++  RDV
Sbjct: 368  SACAQLGAIDLGGWIH-VYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDV 426

Query: 642  VSWNSMINAFALGDRWDDALRLFEEMQRENVMPNDVTMVSAASICGKKCDLELGRRIHAY 821
              W++MI    +  R   A+ LF EMQ   V PN VT  +    C     ++ GR     
Sbjct: 427  YVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHE 486

Query: 822  IQRNDDIEASSILDNALLDMYVKCGSLEDAELLFHSMNTKDSISWTTMLVGYCKL 986
            ++    +         ++D+  + G LE+A  L + M+T  S S    L+G C L
Sbjct: 487  MEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSL 541


>ref|XP_002525630.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223535066|gb|EEF36748.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 765

 Score =  308 bits (788), Expect = 3e-81
 Identities = 170/358 (47%), Positives = 217/358 (60%), Gaps = 4/358 (1%)
 Frame = +3

Query: 60   IALPMRASNE----SNGICVSVNSNGDDHPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLH 227
            +++P+R ++      NG  V+ +S       L L+D    L  + +  +H  +LR GL  
Sbjct: 9    VSIPLRPNHSILTVPNGRPVTSHSQ-----TLSLIDQCTNL--KHLKELHATILRSGLFF 61

Query: 228  HPFSASRLLVGASLSPSPDLAYARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXX 407
            HP++AS+L   A+LS    L YAR++F+ I  PNL++WNTLIRA A+ P+P         
Sbjct: 62   HPYNASKLFSVAALSSFSSLDYARKVFEEISQPNLYTWNTLIRAFASSPEPIHSLLIFIR 121

Query: 408  XXSDGPDDPDKFTFPFXXXXXXXXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAAC 587
               D PD P+KFTFPF                 HGM +K+    SD+FILN+L+H YA+C
Sbjct: 122  MLYDSPDFPNKFTFPFVIKAAAGVASLPFSQAIHGMAIKASL-GSDLFILNSLIHCYASC 180

Query: 588  GDSGLALRVFDNIPSRDVVSWNSMINAFALGDRWDDALRLFEEMQRENVMPNDVTMVSAA 767
            GD   A  VF  I  +DVVSWNSMI  F LG   D AL LF+ M+ ENV PNDVTMV   
Sbjct: 181  GDLDSAYSVFVKIEEKDVVSWNSMIKGFVLGGCPDKALELFQLMKAENVRPNDVTMVGVL 240

Query: 768  SICGKKCDLELGRRIHAYIQRNDDIEASSILDNALLDMYVKCGSLEDAELLFHSMNTKDS 947
            S C KK DLE GRR+  YI+RN  I  +  + NA+LDMYVK GSLEDA  LF  M  KD 
Sbjct: 241  SACAKKMDLEFGRRVCHYIERN-GINVNLTVSNAMLDMYVKNGSLEDARRLFDKMEEKDI 299

Query: 948  ISWTTMLVGYCKLGHFHAARHLFDQMPDRDIASWNALISCYEQSGRSKEALDLFHDLQ 1121
             SWTTM+ GY K   F AAR +FD MP +DI++WN LIS YEQ G+ KEAL +FH+LQ
Sbjct: 300  FSWTTMIDGYAKRRDFDAARSVFDAMPRQDISAWNVLISAYEQDGKPKEALAIFHELQ 357



 Score =  107 bits (268), Expect = 7e-21
 Identities = 62/200 (31%), Positives = 108/200 (54%), Gaps = 5/200 (2%)
 Frame = +3

Query: 543  DIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWNSMINAFALGDRWDDALRLFEEMQ 722
            DIF   T++  YA   D   A  VFD +P +D+ +WN +I+A+    +  +AL +F E+Q
Sbjct: 298  DIFSWTTMIDGYAKRRDFDAARSVFDAMPRQDISAWNVLISAYEQDGKPKEALAIFHELQ 357

Query: 723  -RENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRNDDIEASSILDNALLDMYVKCGS 899
              +   P++VT+VS  S C +   +++G  IH YI++ D I+ +  L  +L+DMY KCG 
Sbjct: 358  LSKTAKPDEVTLVSTLSACAQLGAIDIGGWIHVYIKKQD-IKLNCHLTTSLIDMYSKCGE 416

Query: 900  LEDAELLFHSMNTKDSISWTTMLVGYCKLGHFHAARHLFDQMPDRDI----ASWNALISC 1067
            +E A  +F+S++ +D   W+ M+ G    G   AA  LF +M +  +     ++  L+  
Sbjct: 417  VEKALDIFYSVDRRDVFVWSAMIAGLAMHGRGRAAIDLFFEMQETKVRPNAVTFTNLLCA 476

Query: 1068 YEQSGRSKEALDLFHDLQQA 1127
               +G   E    F+ ++ +
Sbjct: 477  CSHTGLVNEGRMFFNQMESS 496



 Score = 67.8 bits (164), Expect = 8e-09
 Identities = 44/165 (26%), Positives = 68/165 (41%)
 Frame = +3

Query: 282 DLAYARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXX 461
           D   AR +FD++P  ++ +WN LI A+     P                 PD+ T     
Sbjct: 314 DFDAARSVFDAMPRQDISAWNVLISAYEQDGKPKEALAIFHELQLSKTAKPDEVTLVSTL 373

Query: 462 XXXXXXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIPSRDV 641
                          H + +K      +  +  +L+  Y+ CG+   AL +F ++  RDV
Sbjct: 374 SACAQLGAIDIGGWIH-VYIKKQDIKLNCHLTTSLIDMYSKCGEVEKALDIFYSVDRRDV 432

Query: 642 VSWNSMINAFALGDRWDDALRLFEEMQRENVMPNDVTMVSAASIC 776
             W++MI   A+  R   A+ LF EMQ   V PN VT  +    C
Sbjct: 433 FVWSAMIAGLAMHGRGRAAIDLFFEMQETKVRPNAVTFTNLLCAC 477


>ref|XP_004295750.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 1049

 Score =  306 bits (784), Expect = 1e-80
 Identities = 157/329 (47%), Positives = 217/329 (65%)
 Frame = +3

Query: 138  VLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFSASRLLVGASLSPSPDLAYARRLFDSI 317
            +L L+D    L+   + ++H +ML+  L   P+SAS+L+  A+LSP   L YAR++FD I
Sbjct: 89   LLPLIDQCTTLNH--LKQVHAQMLKTSLFFDPYSASKLITAAALSPFSSLDYARQVFDEI 146

Query: 318  PFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXXXXXXXXXXXXXX 497
            P PNLF+WN LIRA+A+ PDP            +  + P+KFTFPF              
Sbjct: 147  PEPNLFTWNALIRAYASSPDPVESIRIFLQMLDECNECPNKFTFPFLLKAASELRASKIG 206

Query: 498  XXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWNSMINAFAL 677
               HGMVVK+    SD++I+N+L+HFY +CG+  LA  VF     +DVVSWNS+I AFA 
Sbjct: 207  RGFHGMVVKAEL-GSDVYIVNSLIHFYGSCGELDLARLVFLKSYKKDVVSWNSVITAFAQ 265

Query: 678  GDRWDDALRLFEEMQRENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRNDDIEASSI 857
            G+  + AL LF+EM+ EN+ PNDVT+VS  S C K  DLE GR + ++++R+  +E +  
Sbjct: 266  GNCPEVALELFKEMEAENMKPNDVTLVSVLSACAKMADLEFGRWVCSHVERHG-VEENLT 324

Query: 858  LDNALLDMYVKCGSLEDAELLFHSMNTKDSISWTTMLVGYCKLGHFHAARHLFDQMPDRD 1037
            L+NA+LDMY KCGS+EDAE LF  M  KD +SWTTML GY ++G++  AR +F  MP +D
Sbjct: 325  LNNAMLDMYAKCGSVEDAERLFGRMPEKDVVSWTTMLDGYARMGNYDEARRVFGTMPSQD 384

Query: 1038 IASWNALISCYEQSGRSKEALDLFHDLQQ 1124
            IA+WN LIS YEQ+G+ KEAL +FH+LQ+
Sbjct: 385  IATWNVLISSYEQNGKPKEALAVFHELQK 413



 Score = 90.1 bits (222), Expect = 1e-15
 Identities = 53/196 (27%), Positives = 98/196 (50%), Gaps = 1/196 (0%)
 Frame = +3

Query: 543  DIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWNSMINAFALGDRWDDALRLFEEMQ 722
            D+    T++  YA  G+   A RVF  +PS+D+ +WN +I+++    +  +AL +F E+Q
Sbjct: 353  DVVSWTTMLDGYARMGNYDEARRVFGTMPSQDIATWNVLISSYEQNGKPKEALAVFHELQ 412

Query: 723  R-ENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRNDDIEASSILDNALLDMYVKCGS 899
            + +   P++VT+VS  + C +   ++LG  IH Y+++   ++ +  L  +L+DMY KCG+
Sbjct: 413  KNKGPKPDEVTLVSTLAACSQLGAIDLGGWIHVYVKKQG-MKLNCHLTTSLIDMYAKCGN 471

Query: 900  LEDAELLFHSMNTKDSISWTTMLVGYCKLGHFHAARHLFDQMPDRDIASWNALISCYEQS 1079
            LE                                A  +F+    RD+  W+A+I+     
Sbjct: 472  LEK-------------------------------ALEVFNSAETRDVFVWSAMIAALAMH 500

Query: 1080 GRSKEALDLFHDLQQA 1127
            G+ ++AL  F  + +A
Sbjct: 501  GQGRDALHFFSKMLEA 516



 Score = 82.0 bits (201), Expect = 4e-13
 Identities = 66/269 (24%), Positives = 112/269 (41%), Gaps = 5/269 (1%)
 Frame = +3

Query: 294  ARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXXXXXX 473
            ARR+F ++P  ++ +WN LI ++     P            +    PD+ T         
Sbjct: 373  ARRVFGTMPSQDIATWNVLISSYEQNGKPKEALAVFHELQKNKGPKPDEVTLVSTLAACS 432

Query: 474  XXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWN 653
                       H + VK      +  +  +L+  YA CG+   AL VF++  +RDV  W+
Sbjct: 433  QLGAIDLGGWIH-VYVKKQGMKLNCHLTTSLIDMYAKCGNLEKALEVFNSAETRDVFVWS 491

Query: 654  SMINAFALGDRWDDALRLFEEMQRENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRN 833
            +MI A A+  +  DAL  F +M    V PN VT  +    C     +  GR +   +++ 
Sbjct: 492  AMIAALAMHGQGRDALHFFSKMLEAKVKPNAVTFTNILCACSHAGLVNEGRTVFNQMEQV 551

Query: 834  DDIEASSILDNALLDMYVKCGSLEDAELLFHSMNTKDSISWTTMLVGYCKLGH-----FH 998
              +         ++D+  + G+LE+A  L   M    + S    L+G C           
Sbjct: 552  YGVVPGIKHYACMVDILGRSGNLEEAAELIEKMPISPTPSVWGALLGACTRHENVALAEK 611

Query: 999  AARHLFDQMPDRDIASWNALISCYEQSGR 1085
            A  HL D  P R+  ++  L + Y ++G+
Sbjct: 612  ACSHLLDLDP-RNHGAYVLLSNVYAKTGK 639


>emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
          Length = 694

 Score =  304 bits (778), Expect = 5e-80
 Identities = 167/362 (46%), Positives = 214/362 (59%)
 Frame = +3

Query: 39   LPSFPSSIALPMRASNESNGICVSVNSNGDDHPVLQLLDDYRRLDTRTIHRIHCRMLRLG 218
            L S P S +LP   +   N I ++ +    +HP L L+D     +T+ + +IH +MLR G
Sbjct: 8    LVSLPRSHSLP---TPNPNSITLNNDRYFANHPTLSLIDQCS--ETKQLKQIHAQMLRTG 62

Query: 219  LLHHPFSASRLLVGASLSPSPDLAYARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXX 398
            L   PFSASRL+  A+LSP P L YA+++FD IP PNL++WNTLIRA+A+  +P      
Sbjct: 63   LFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLI 122

Query: 399  XXXXXSDGPDDPDKFTFPFXXXXXXXXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFY 578
                    PD PDKFTFPF                 HGMV+K     SD+FILN+L+HFY
Sbjct: 123  FLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKV-LLGSDVFILNSLIHFY 181

Query: 579  AACGDSGLALRVFDNIPSRDVVSWNSMINAFALGDRWDDALRLFEEMQRENVMPNDVTMV 758
            A CG+ GL  RVF N P RDVVSWNSMI AF  G   ++AL LF+EM+ +NV PN +TMV
Sbjct: 182  AKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMV 241

Query: 759  SAASICGKKCDLELGRRIHAYIQRNDDIEASSILDNALLDMYVKCGSLEDAELLFHSMNT 938
               S C KK D E GR +H+YI+RN  I  S  L NA+LDMY KCGS+EDA+ LF  M  
Sbjct: 242  GVLSACAKKSDFEFGRWVHSYIERN-RIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPE 300

Query: 939  KDSISWTTMLVGYCKLGHFHAARHLFDQMPDRDIASWNALISCYEQSGRSKEALDLFHDL 1118
            KD +SWTTMLVGY K+G + AA+ L                      G  K+A+ LF  +
Sbjct: 301  KDIVSWTTMLVGYAKIGEYDAAQGL-------------------AMHGHGKDAIALFSKM 341

Query: 1119 QQ 1124
            Q+
Sbjct: 342  QE 343



 Score = 69.3 bits (168), Expect = 3e-09
 Identities = 57/247 (23%), Positives = 97/247 (39%), Gaps = 12/247 (4%)
 Frame = +3

Query: 282 DLAYARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXX 461
           +L    R+F + P  ++ SWN++I A   G  P           +     P+  T     
Sbjct: 186 ELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVK-PNGITMVGVL 244

Query: 462 XXXXXXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIPSRDV 641
                          H  + ++    S + + N ++  Y  CG    A R+FD +P +D+
Sbjct: 245 SACAKKSDFEFGRWVHSYIERNRIXES-LTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDI 303

Query: 642 VSWNSMINAFALGDRWD------------DALRLFEEMQRENVMPNDVTMVSAASICGKK 785
           VSW +M+  +A    +D            DA+ LF +MQ + V PN VT  +    C   
Sbjct: 304 VSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHV 363

Query: 786 CDLELGRRIHAYIQRNDDIEASSILDNALLDMYVKCGSLEDAELLFHSMNTKDSISWTTM 965
             +E GR     ++    +         ++D+  + G LE+A  L   M    + S    
Sbjct: 364 GLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGA 423

Query: 966 LVGYCKL 986
           L+G C +
Sbjct: 424 LLGACTI 430


>gb|EPS69071.1| hypothetical protein M569_05691, partial [Genlisea aurea]
          Length = 726

 Score =  303 bits (777), Expect = 6e-80
 Identities = 159/340 (46%), Positives = 211/340 (62%), Gaps = 6/340 (1%)
 Frame = +3

Query: 126  DDHPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFSASRLLVGASLSPSPDLAYARRL 305
            + HP + L+D  R    + + +IHC+MLR GLL  PF+AS+L+  ++LS    LAYA+++
Sbjct: 9    EKHPTVTLID--RCTSQKQLKQIHCQMLRSGLLDDPFAASKLISLSALSDFSSLAYAQKV 66

Query: 306  FDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXXXXXXXXXX 485
            FD +P PNLFSWN L+RA+A+   P              PD PDKFT+PF          
Sbjct: 67   FDQMPRPNLFSWNILVRAYASASRPLHSLSLFIRLLHHSPDPPDKFTYPFAIKACADLSD 126

Query: 486  XXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIPS--RDVVSWNSM 659
                   HGM VK    +SD+F+ N+L+ FY+ C     A R+F+ +P   RDVVSWNSM
Sbjct: 127  LRLGRGIHGMAVKGNH-ASDVFVSNSLIRFYSECRCLVAAYRIFETMPRTRRDVVSWNSM 185

Query: 660  INAFALGDRWDDALRLFEEM----QRENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQ 827
            IN        DDA+ LF  M    + E V PN VTM+S   ICG K DLELG+  H+Y+ 
Sbjct: 186  INGLVQNKWHDDAMELFHRMVAEEEEEGVEPNGVTMLSVLGICGTKSDLELGKWAHSYVN 245

Query: 828  RNDDIEASSILDNALLDMYVKCGSLEDAELLFHSMNTKDSISWTTMLVGYCKLGHFHAAR 1007
            +N  +E S ILDNA+LDMY KCG +++A  +F  M  +D I+WTTML GY K G F AAR
Sbjct: 246  KNG-MEGSLILDNAILDMYTKCGGMKEAREVFDKMEDRDVITWTTMLTGYAKTGDFKAAR 304

Query: 1008 HLFDQMPDRDIASWNALISCYEQSGRSKEALDLFHDLQQA 1127
             LFD +P +DI SWNALIS YEQ G +KEA+ +F++LQQ+
Sbjct: 305  DLFDALPTKDITSWNALISAYEQRGNAKEAIAIFNELQQS 344



 Score =  113 bits (282), Expect = 2e-22
 Identities = 65/200 (32%), Positives = 110/200 (55%), Gaps = 7/200 (3%)
 Frame = +3

Query: 543  DIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWNSMINAFALGDRWDDALRLFEEMQ 722
            D+    T++  YA  GD   A  +FD +P++D+ SWN++I+A+       +A+ +F E+Q
Sbjct: 283  DVITWTTMLTGYAKTGDFKAARDLFDALPTKDITSWNALISAYEQRGNAKEAIAIFNELQ 342

Query: 723  REN--VMPNDVTMVSAASICGKKCDLELGRRIHAYIQRNDDIEASSILDNALLDMYVKCG 896
            + N    P+ VT+VS  S C +   +ELG RIH Y+++   +  +  L  +L+DMY KCG
Sbjct: 343  QSNNDTEPDGVTLVSTLSACSQLGAIELGTRIHNYVKKR-GMSLNCHLVTSLIDMYSKCG 401

Query: 897  SLEDAELLFH-SMNTKDSISWTTMLVGYCKLGHFHAARHLFDQMPDRDI----ASWNALI 1061
             LE A  +F  S + +D   W+ M+  Y   G  H A  LF +M +  +     ++  L+
Sbjct: 402  DLEKAAQVFRSSSHERDVFVWSAMIAAYGMHGCGHDAVELFKKMQEAKVKPSFVTFTNLL 461

Query: 1062 SCYEQSGRSKEALDLFHDLQ 1121
            S    SG  +E ++LF+ ++
Sbjct: 462  SACSHSGLVEEGVELFNQME 481


>ref|XP_006480615.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Citrus sinensis]
          Length = 746

 Score =  299 bits (766), Expect = 1e-78
 Identities = 154/328 (46%), Positives = 206/328 (62%)
 Frame = +3

Query: 132  HPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFSASRLLVGASLSPSPDLAYARRLFD 311
            HPV  L+   + +  + + +IH +MLR GL   P+SAS+L    +L     L YAR +FD
Sbjct: 40   HPVFSLIKQCKNI--KQLKQIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMFD 97

Query: 312  SIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXXXXXXXXXXXX 491
             IP PNL++WNTLIRA+++  +P            + P  P++FTFPF            
Sbjct: 98   QIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFR 157

Query: 492  XXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWNSMINAF 671
                 HGMV+KS F   D+FI N+L+HFYA CGD  +A  VF  I  +DVVSWNSMI+ F
Sbjct: 158  VGQAIHGMVIKSSF-EDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGF 216

Query: 672  ALGDRWDDALRLFEEMQRENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRNDDIEAS 851
              G  ++ A+ L+ EM+ ENV P++VTMV+  S C KK DLE GR + +YI++N  I+  
Sbjct: 217  VQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWVCSYIEKNG-IKMD 275

Query: 852  SILDNALLDMYVKCGSLEDAELLFHSMNTKDSISWTTMLVGYCKLGHFHAARHLFDQMPD 1031
              L NA+LDMYVKCGSLEDA+ LF  M  KD +SWTTM+ GY KLG F AA  +   +P 
Sbjct: 276  LTLSNAMLDMYVKCGSLEDAKSLFDKMEEKDIVSWTTMIDGYAKLGEFDAAMSVLAAVPI 335

Query: 1032 RDIASWNALISCYEQSGRSKEALDLFHD 1115
            + IA+WNALIS YEQ+G+  EAL +FH+
Sbjct: 336  QQIATWNALISAYEQNGKPNEALSIFHE 363



 Score =  108 bits (270), Expect = 4e-21
 Identities = 59/198 (29%), Positives = 107/198 (54%), Gaps = 5/198 (2%)
 Frame = +3

Query: 543  DIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWNSMINAFALGDRWDDALRLFEEMQ 722
            DI    T++  YA  G+   A+ V   +P + + +WN++I+A+    + ++AL +F E  
Sbjct: 306  DIVSWTTMIDGYAKLGEFDAAMSVLAAVPIQQIATWNALISAYEQNGKPNEALSIFHEQL 365

Query: 723  RENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRNDDIEASSILDNALLDMYVKCGSL 902
             +NV P++ T VS  S C +   +++G +IHA +++   I+ +  L  +L+DMY KCG+L
Sbjct: 366  SKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKK-QGIKLNCYLTTSLIDMYTKCGNL 424

Query: 903  EDAELLFHSMNTKDSISWTTMLVGYCKLGHFHAARHLFDQMPD-----RDIASWNALISC 1067
            + A  +FH++ ++D   W+TM+ G+   G    A  LF +M +       +   N L +C
Sbjct: 425  DKALEVFHTVKSRDVFVWSTMIAGFAMYGRGRDALDLFSRMQEAKVKPNAVTFTNVLCAC 484

Query: 1068 YEQSGRSKEALDLFHDLQ 1121
               SG   E    F+ ++
Sbjct: 485  -SHSGLVDEGRMFFNQME 501



 Score = 84.3 bits (207), Expect = 8e-14
 Identities = 64/251 (25%), Positives = 99/251 (39%), Gaps = 5/251 (1%)
 Frame = +3

Query: 294  ARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXXXXXX 473
            A  +  ++P   + +WN LI A+     P           S   + PD+FTF        
Sbjct: 326  AMSVLAAVPIQQIATWNALISAYEQNGKPNEALSIFHEQLSKNVN-PDEFTFVSVLSACA 384

Query: 474  XXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWN 653
                       H  + K      + ++  +L+  Y  CG+   AL VF  + SRDV  W+
Sbjct: 385  QLGAMDIGVQIHAKMKKQGI-KLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWS 443

Query: 654  SMINAFALGDRWDDALRLFEEMQRENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRN 833
            +MI  FA+  R  DAL LF  MQ   V PN VT  +    C     ++ GR     ++  
Sbjct: 444  TMIAGFAMYGRGRDALDLFSRMQEAKVKPNAVTFTNVLCACSHSGLVDEGRMFFNQMEPV 503

Query: 834  DDIEASSILDNALLDMYVKCGSLEDAELLFHSMNTKDSISWTTMLVGYCKLGH-----FH 998
              +         ++DM  + G L++A      M      S    L+G CK+        +
Sbjct: 504  YGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASVWGALLGACKIHENVELAEY 563

Query: 999  AARHLFDQMPD 1031
            A  HL +  P+
Sbjct: 564  ACSHLLELEPE 574


>ref|XP_006428806.1| hypothetical protein CICLE_v10011151mg [Citrus clementina]
            gi|557530863|gb|ESR42046.1| hypothetical protein
            CICLE_v10011151mg [Citrus clementina]
          Length = 737

 Score =  299 bits (766), Expect = 1e-78
 Identities = 154/328 (46%), Positives = 206/328 (62%)
 Frame = +3

Query: 132  HPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFSASRLLVGASLSPSPDLAYARRLFD 311
            HPV  L+   + +  + + +IH +MLR GL   P+SAS+L    +L     L YAR +FD
Sbjct: 31   HPVFSLIKQCKNI--KQLKQIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMFD 88

Query: 312  SIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXXXXXXXXXXXX 491
             IP PNL++WNTLIRA+++  +P            + P  P++FTFPF            
Sbjct: 89   QIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFR 148

Query: 492  XXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWNSMINAF 671
                 HGMV+KS F   D+FI N+L+HFYA CGD  +A  VF  I  +DVVSWNSMI+ F
Sbjct: 149  VGQAIHGMVIKSSF-EDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGF 207

Query: 672  ALGDRWDDALRLFEEMQRENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRNDDIEAS 851
              G  ++ A+ L+ EM+ ENV P++VTMV+  S C KK DLE GR + +YI++N  I+  
Sbjct: 208  VQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWVCSYIEKNG-IKMD 266

Query: 852  SILDNALLDMYVKCGSLEDAELLFHSMNTKDSISWTTMLVGYCKLGHFHAARHLFDQMPD 1031
              L NA+LDMYVKCGSLEDA+ LF  M  KD +SWTTM+ GY KLG F AA  +   +P 
Sbjct: 267  LTLSNAMLDMYVKCGSLEDAKSLFDKMEEKDIVSWTTMIDGYAKLGEFDAAMSVLAAVPI 326

Query: 1032 RDIASWNALISCYEQSGRSKEALDLFHD 1115
            + IA+WNALIS YEQ+G+  EAL +FH+
Sbjct: 327  QQIATWNALISAYEQNGKPNEALSIFHE 354



 Score =  108 bits (270), Expect = 4e-21
 Identities = 59/198 (29%), Positives = 107/198 (54%), Gaps = 5/198 (2%)
 Frame = +3

Query: 543  DIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWNSMINAFALGDRWDDALRLFEEMQ 722
            DI    T++  YA  G+   A+ V   +P + + +WN++I+A+    + ++AL +F E  
Sbjct: 297  DIVSWTTMIDGYAKLGEFDAAMSVLAAVPIQQIATWNALISAYEQNGKPNEALSIFHEQL 356

Query: 723  RENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRNDDIEASSILDNALLDMYVKCGSL 902
             +NV P++ T VS  S C +   +++G +IHA +++   I+ +  L  +L+DMY KCG+L
Sbjct: 357  SKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKK-QGIKLNCYLTTSLIDMYTKCGNL 415

Query: 903  EDAELLFHSMNTKDSISWTTMLVGYCKLGHFHAARHLFDQMPD-----RDIASWNALISC 1067
            + A  +FH++ ++D   W+TM+ G+   G    A  LF +M +       +   N L +C
Sbjct: 416  DKALEVFHTVKSRDVFVWSTMIAGFAMYGRGRDALDLFSRMQEAKVKPNAVTFTNVLCAC 475

Query: 1068 YEQSGRSKEALDLFHDLQ 1121
               SG   E    F+ ++
Sbjct: 476  -SHSGLVDEGRMFFNQME 492



 Score = 82.0 bits (201), Expect = 4e-13
 Identities = 64/251 (25%), Positives = 97/251 (38%), Gaps = 5/251 (1%)
 Frame = +3

Query: 294  ARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXXXXXX 473
            A  +  ++P   + +WN LI A+     P           S   + PD+FTF        
Sbjct: 317  AMSVLAAVPIQQIATWNALISAYEQNGKPNEALSIFHEQLSKNVN-PDEFTFVSVLSACA 375

Query: 474  XXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWN 653
                       H  + K      + ++  +L+  Y  CG+   AL VF  + SRDV  W+
Sbjct: 376  QLGAMDIGVQIHAKMKKQGI-KLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWS 434

Query: 654  SMINAFALGDRWDDALRLFEEMQRENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRN 833
            +MI  FA+  R  DAL LF  MQ   V PN VT  +    C     ++ GR     ++  
Sbjct: 435  TMIAGFAMYGRGRDALDLFSRMQEAKVKPNAVTFTNVLCACSHSGLVDEGRMFFNQMEPV 494

Query: 834  DDIEASSILDNALLDMYVKCGSLEDAELLFHSMNTKDSISWTTMLVGYCKLGH-----FH 998
                        ++DM  + G L +A      M      S    L+G CK+        +
Sbjct: 495  YGAVPGVKHYTCMVDMLGRAGLLNEAVEFIEKMPIVPGASVWGALLGACKIHENVELAEY 554

Query: 999  AARHLFDQMPD 1031
            A  HL +  P+
Sbjct: 555  ACSHLLELEPE 565


>ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like isoform X1 [Glycine max]
          Length = 780

 Score =  293 bits (750), Expect = 9e-77
 Identities = 165/375 (44%), Positives = 227/375 (60%), Gaps = 5/375 (1%)
 Frame = +3

Query: 12   SSSSMATHLLPSFPSS-----IALPMRASNESNGICVSVNSNGDDHPVLQLLDDYRRLDT 176
            SS+S +T L  S   S     ++L   A N +  +     +  +   +L+ +D     +T
Sbjct: 28   SSTSNSTLLRVSVKCSALSTPLSLGQIAMNCTEAVKGEKGNEVESTNILEFIDQCT--NT 85

Query: 177  RTIHRIHCRMLRLGLLHHPFSASRLLVGASLSPSPDLAYARRLFDSIPFPNLFSWNTLIR 356
              + +IH  MLR      P++AS+LL   ++S    L YA+ +F+ IP PNL+ WNTLIR
Sbjct: 86   MQLKQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIR 145

Query: 357  AHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXXXXXXXXXXXXXXXXXHGMVVKSPFF 536
             +A+  DP               + P+KFTFPF                 HGMV+K+   
Sbjct: 146  GYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASL- 204

Query: 537  SSDIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWNSMINAFALGDRWDDALRLFEE 716
            SSD+FILN+L++FY + G   LA RVF N+P +DVVSWN+MINAFALG   D AL LF+E
Sbjct: 205  SSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQE 264

Query: 717  MQRENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRNDDIEASSILDNALLDMYVKCG 896
            M+ ++V PN +TMVS  S C KK DLE GR I +YI+ N   E   IL+NA+LDMYVKCG
Sbjct: 265  MEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTE-HLILNNAMLDMYVKCG 323

Query: 897  SLEDAELLFHSMNTKDSISWTTMLVGYCKLGHFHAARHLFDQMPDRDIASWNALISCYEQ 1076
             + DA+ LF+ M+ KD +SWTTML G+ KLG++  A  +FD MP +  A+WNALIS YEQ
Sbjct: 324  CINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQ 383

Query: 1077 SGRSKEALDLFHDLQ 1121
            +G+ + AL LFH++Q
Sbjct: 384  NGKPRVALSLFHEMQ 398



 Score = 93.6 bits (231), Expect = 1e-16
 Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 6/199 (3%)
 Frame = +3

Query: 543  DIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWNSMINAFALGDRWDDALRLFEEMQ 722
            DI    T++  +A  G+   A  +FD +P +   +WN++I+A+    +   AL LF EMQ
Sbjct: 339  DIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQ 398

Query: 723  -RENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRNDDIEASSILDNALLDMYVKCGS 899
              ++  P++VT++ A     +   ++ G  IH YI+++D I  +  L  +LLDMY KCG+
Sbjct: 399  LSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHD-INLNCHLATSLLDMYAKCGN 457

Query: 900  LEDAELLFHSMNTKDSISWTTMLVGYCKLGHFHAARHLFDQMPD-----RDIASWNALIS 1064
            L  A  +FH++  KD   W+ M+      G   AA  LF  M +       +   N L +
Sbjct: 458  LNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCA 517

Query: 1065 CYEQSGRSKEALDLFHDLQ 1121
            C   +G   E   LF  ++
Sbjct: 518  C-NHAGLVNEGEQLFEQME 535



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 51/229 (22%), Positives = 87/229 (37%)
 Frame = +3

Query: 294  ARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXXXXXX 473
            A  +FD++P     +WN LI A+     P                 PD+ T         
Sbjct: 359  AHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASA 418

Query: 474  XXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWN 653
                       H + +K    + +  +  +L+  YA CG+   A+ VF  +  +DV  W+
Sbjct: 419  QLGAIDFGHWIH-VYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWS 477

Query: 654  SMINAFALGDRWDDALRLFEEMQRENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRN 833
            +MI A A+  +   AL LF  M    + PN VT  +    C     +  G ++   ++  
Sbjct: 478  AMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPL 537

Query: 834  DDIEASSILDNALLDMYVKCGSLEDAELLFHSMNTKDSISWTTMLVGYC 980
              I         ++D++ + G LE A      M    + +    L+G C
Sbjct: 538  YGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGAC 586


>ref|XP_006575137.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like isoform X2 [Glycine max]
          Length = 695

 Score =  290 bits (743), Expect = 6e-76
 Identities = 152/313 (48%), Positives = 202/313 (64%)
 Frame = +3

Query: 183  IHRIHCRMLRLGLLHHPFSASRLLVGASLSPSPDLAYARRLFDSIPFPNLFSWNTLIRAH 362
            + +IH  MLR      P++AS+LL   ++S    L YA+ +F+ IP PNL+ WNTLIR +
Sbjct: 3    LKQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGY 62

Query: 363  AAGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXXXXXXXXXXXXXXXXXHGMVVKSPFFSS 542
            A+  DP               + P+KFTFPF                 HGMV+K+   SS
Sbjct: 63   ASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASL-SS 121

Query: 543  DIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWNSMINAFALGDRWDDALRLFEEMQ 722
            D+FILN+L++FY + G   LA RVF N+P +DVVSWN+MINAFALG   D AL LF+EM+
Sbjct: 122  DLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEME 181

Query: 723  RENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRNDDIEASSILDNALLDMYVKCGSL 902
             ++V PN +TMVS  S C KK DLE GR I +YI+ N   E   IL+NA+LDMYVKCG +
Sbjct: 182  MKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTE-HLILNNAMLDMYVKCGCI 240

Query: 903  EDAELLFHSMNTKDSISWTTMLVGYCKLGHFHAARHLFDQMPDRDIASWNALISCYEQSG 1082
             DA+ LF+ M+ KD +SWTTML G+ KLG++  A  +FD MP +  A+WNALIS YEQ+G
Sbjct: 241  NDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNG 300

Query: 1083 RSKEALDLFHDLQ 1121
            + + AL LFH++Q
Sbjct: 301  KPRVALSLFHEMQ 313



 Score = 93.6 bits (231), Expect = 1e-16
 Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 6/199 (3%)
 Frame = +3

Query: 543  DIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWNSMINAFALGDRWDDALRLFEEMQ 722
            DI    T++  +A  G+   A  +FD +P +   +WN++I+A+    +   AL LF EMQ
Sbjct: 254  DIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQ 313

Query: 723  -RENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRNDDIEASSILDNALLDMYVKCGS 899
              ++  P++VT++ A     +   ++ G  IH YI+++D I  +  L  +LLDMY KCG+
Sbjct: 314  LSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHD-INLNCHLATSLLDMYAKCGN 372

Query: 900  LEDAELLFHSMNTKDSISWTTMLVGYCKLGHFHAARHLFDQMPD-----RDIASWNALIS 1064
            L  A  +FH++  KD   W+ M+      G   AA  LF  M +       +   N L +
Sbjct: 373  LNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCA 432

Query: 1065 CYEQSGRSKEALDLFHDLQ 1121
            C   +G   E   LF  ++
Sbjct: 433  C-NHAGLVNEGEQLFEQME 450



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 51/229 (22%), Positives = 87/229 (37%)
 Frame = +3

Query: 294 ARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXXXXXX 473
           A  +FD++P     +WN LI A+     P                 PD+ T         
Sbjct: 274 AHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASA 333

Query: 474 XXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWN 653
                      H + +K    + +  +  +L+  YA CG+   A+ VF  +  +DV  W+
Sbjct: 334 QLGAIDFGHWIH-VYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWS 392

Query: 654 SMINAFALGDRWDDALRLFEEMQRENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRN 833
           +MI A A+  +   AL LF  M    + PN VT  +    C     +  G ++   ++  
Sbjct: 393 AMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPL 452

Query: 834 DDIEASSILDNALLDMYVKCGSLEDAELLFHSMNTKDSISWTTMLVGYC 980
             I         ++D++ + G LE A      M    + +    L+G C
Sbjct: 453 YGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGAC 501


>ref|XP_002314110.1| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|222850518|gb|EEE88065.1|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 738

 Score =  290 bits (743), Expect = 6e-76
 Identities = 156/345 (45%), Positives = 210/345 (60%), Gaps = 1/345 (0%)
 Frame = +3

Query: 90   SNGICVSVNSNGDDHP-VLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFSASRLLVGAS 266
            SN   ++ N+    +P  + +L D +  + + + ++H  MLR GL   P SA++L    +
Sbjct: 15   SNPTILTANNEQKSNPSTVPILID-KCANKKHLKQLHAHMLRTGLFFDPPSATKLFTACA 73

Query: 267  LSPSPDLAYARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFT 446
            LS    L YA ++FD IP PNL++WNTLIRA A+ P P            +    P+ +T
Sbjct: 74   LSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYT 133

Query: 447  FPFXXXXXXXXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNI 626
            FPF                 HGMV+K+ F  SD+FI N+L+HFY++ GD   A  VF  I
Sbjct: 134  FPFVIKAATEVSSLLAGQAIHGMVMKASF-GSDLFISNSLIHFYSSLGDLDSAYLVFSKI 192

Query: 627  PSRDVVSWNSMINAFALGDRWDDALRLFEEMQRENVMPNDVTMVSAASICGKKCDLELGR 806
              +D+VSWNSMI+ F  G   ++AL+LF+ M+ EN  PN VTMV   S C K+ DLE GR
Sbjct: 193  VEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGR 252

Query: 807  RIHAYIQRNDDIEASSILDNALLDMYVKCGSLEDAELLFHSMNTKDSISWTTMLVGYCKL 986
                YI+RN  I+ + IL NA+LDMYVKCGSLEDA  LF  M  KD +SWTTM+ GY K+
Sbjct: 253  WACDYIERNG-IDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKV 311

Query: 987  GHFHAARHLFDQMPDRDIASWNALISCYEQSGRSKEALDLFHDLQ 1121
            G + AAR +FD MP  DI +WNALIS Y+Q+G+ KEAL +F +LQ
Sbjct: 312  GDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQ 356



 Score = 97.1 bits (240), Expect = 1e-17
 Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 1/195 (0%)
 Frame = +3

Query: 543  DIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWNSMINAFALGDRWDDALRLFEEMQ 722
            DI    T++  YA  GD   A RVFD +P  D+ +WN++I+++    +  +AL +F E+Q
Sbjct: 297  DIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQ 356

Query: 723  -RENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRNDDIEASSILDNALLDMYVKCGS 899
              +N  PN+VT+ S  + C +   ++LG  IH YI++   I+ +  +  +L+DMY KCG 
Sbjct: 357  LNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQG-IKLNFHITTSLIDMYSKCG- 414

Query: 900  LEDAELLFHSMNTKDSISWTTMLVGYCKLGHFHAARHLFDQMPDRDIASWNALISCYEQS 1079
                                          H   A  +F  +  RD+  W+A+I+     
Sbjct: 415  ------------------------------HLEKALEVFYSVERRDVFVWSAMIAGLAMH 444

Query: 1080 GRSKEALDLFHDLQQ 1124
            G  + A+DLF  +Q+
Sbjct: 445  GHGRAAIDLFSKMQE 459



 Score = 77.8 bits (190), Expect = 7e-12
 Identities = 65/272 (23%), Positives = 111/272 (40%), Gaps = 4/272 (1%)
 Frame = +3

Query: 282  DLAYARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXX 461
            D   ARR+FD +P  ++ +WN LI ++     P            +    P++ T     
Sbjct: 313  DYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTL 372

Query: 462  XXXXXXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIPSRDV 641
                           H + +K      +  I  +L+  Y+ CG    AL VF ++  RDV
Sbjct: 373  AACAQLGAMDLGGWIH-VYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDV 431

Query: 642  VSWNSMINAFALGDRWDDALRLFEEMQRENVMPNDVTMVSAASICGKKCDLELGRRIHAY 821
              W++MI   A+      A+ LF +MQ   V PN VT  +    C     ++ GR     
Sbjct: 432  FVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQ 491

Query: 822  IQRNDDIEASSILDNALLDMYVKCGSLEDAELLFHSMNTKDSISWTTMLVGYCKL-GHFH 998
            ++    +   S     ++D+  + G LE+A  L   M    S S    L+G C++ G+  
Sbjct: 492  MRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVE 551

Query: 999  AARHLFDQMPDRDIASWNA---LISCYEQSGR 1085
             A     ++ + D  +  A   L + Y ++G+
Sbjct: 552  LAEMACSRLLETDSNNHGAYVLLSNIYAKAGK 583


>ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297325073|gb|EFH55493.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  284 bits (727), Expect = 4e-74
 Identities = 158/355 (44%), Positives = 213/355 (60%), Gaps = 1/355 (0%)
 Frame = +3

Query: 60   IALPMRASNESNGICVSVNSNGDDHPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFS 239
            ++LP R  N SN    + N+    H +  L+D  R    R + + H  M+R G+   P+S
Sbjct: 10   LSLP-RHPNFSNPNQPTTNNERSRHTI-SLID--RCSSLRQLKQTHAHMIRTGMFSDPYS 65

Query: 240  ASRLLVGASLSPSPDLAYARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXS- 416
            AS+L   A+LS    L YAR++FD IP PN F+WNTLIRA+A+GPDP           S 
Sbjct: 66   ASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSS 125

Query: 417  DGPDDPDKFTFPFXXXXXXXXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDS 596
            +    P+K+TFPF                 HGM +KS    SD+F+ N+L+H Y +CGD 
Sbjct: 126  ESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAV-GSDVFVANSLIHCYFSCGDL 184

Query: 597  GLALRVFDNIPSRDVVSWNSMINAFALGDRWDDALRLFEEMQRENVMPNDVTMVSAASIC 776
              A +VF  I  +DVVSWNSMIN F      D AL LF++M+ E+V  + VTMV   S C
Sbjct: 185  DSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSAC 244

Query: 777  GKKCDLELGRRIHAYIQRNDDIEASSILDNALLDMYVKCGSLEDAELLFHSMNTKDSISW 956
             K  DLE GRR+ +YI+ N  +  +  L NA+LDMY KCGS+EDA+ LF +M  KD+++W
Sbjct: 245  AKIRDLEFGRRVCSYIEENR-VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTW 303

Query: 957  TTMLVGYCKLGHFHAARHLFDQMPDRDIASWNALISCYEQSGRSKEALDLFHDLQ 1121
            TTML GY     + AAR + + MP +DI +WNALIS YEQ+G+  EAL +FH+LQ
Sbjct: 304  TTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQ 358



 Score =  106 bits (264), Expect = 2e-20
 Identities = 61/194 (31%), Positives = 110/194 (56%), Gaps = 5/194 (2%)
 Frame = +3

Query: 561  TLVHFYAACGDSGLALRVFDNIPSRDVVSWNSMINAFALGDRWDDALRLFEEMQ-RENVM 737
            T++  YA   D   A  V + +P +D+V+WN++I+A+    + ++AL +F E+Q ++N+ 
Sbjct: 305  TMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIK 364

Query: 738  PNDVTMVSAASICGKKCDLELGRRIHAYIQRNDDIEASSILDNALLDMYVKCGSLEDAEL 917
             N +T+VS  S C +   LELGR IH+YI++N  I+ +  + +AL+ MY KCG LE A  
Sbjct: 365  LNQITLVSTLSACAQVGALELGRWIHSYIKKNG-IKMNFYVTSALIHMYSKCGDLEKARE 423

Query: 918  LFHSMNTKDSISWTTMLVGYCKLGHFHAARHLFDQMPDRDI----ASWNALISCYEQSGR 1085
            +F+S+  +D   W+ M+ G    G    A  +F +M + ++     ++  +      +G 
Sbjct: 424  VFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGL 483

Query: 1086 SKEALDLFHDLQQA 1127
              EA  LF+ ++ +
Sbjct: 484  VDEAESLFYKMESS 497



 Score = 76.3 bits (186), Expect = 2e-11
 Identities = 54/237 (22%), Positives = 96/237 (40%)
 Frame = +3

Query: 276  SPDLAYARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPF 455
            S D   AR + +++P  ++ +WN LI A+     P                  ++ T   
Sbjct: 313  SEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVS 372

Query: 456  XXXXXXXXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIPSR 635
                             H  + K+     + ++ + L+H Y+ CGD   A  VF+++  R
Sbjct: 373  TLSACAQVGALELGRWIHSYIKKNGI-KMNFYVTSALIHMYSKCGDLEKAREVFNSVEKR 431

Query: 636  DVVSWNSMINAFALGDRWDDALRLFEEMQRENVMPNDVTMVSAASICGKKCDLELGRRIH 815
            DV  W++MI   A+     +A+ +F +MQ  NV PN VT  +    C     ++    + 
Sbjct: 432  DVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLF 491

Query: 816  AYIQRNDDIEASSILDNALLDMYVKCGSLEDAELLFHSMNTKDSISWTTMLVGYCKL 986
              ++ +  I         ++D+  + G LE A     +M    S S    L+G CK+
Sbjct: 492  YKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKI 548


>ref|NP_180537.1| RNA editing factor OTP81 [Arabidopsis thaliana]
            gi|75100656|sp|O82380.1|PP175_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g29760, chloroplastic; Flags: Precursor
            gi|3582328|gb|AAC35225.1| hypothetical protein
            [Arabidopsis thaliana] gi|330253207|gb|AEC08301.1| RNA
            editing factor OTP81 [Arabidopsis thaliana]
          Length = 738

 Score =  284 bits (727), Expect = 4e-74
 Identities = 156/354 (44%), Positives = 213/354 (60%)
 Frame = +3

Query: 60   IALPMRASNESNGICVSVNSNGDDHPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFS 239
            ++LP R  N SN    + N+    H  + L++  R +  R + + H  M+R G    P+S
Sbjct: 10   LSLP-RHPNFSNPNQPTTNNERSRH--ISLIE--RCVSLRQLKQTHGHMIRTGTFSDPYS 64

Query: 240  ASRLLVGASLSPSPDLAYARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSD 419
            AS+L   A+LS    L YAR++FD IP PN F+WNTLIRA+A+GPDP           S+
Sbjct: 65   ASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSE 124

Query: 420  GPDDPDKFTFPFXXXXXXXXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSG 599
                P+K+TFPF                 HGM VKS    SD+F+ N+L+H Y +CGD  
Sbjct: 125  SQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAV-GSDVFVANSLIHCYFSCGDLD 183

Query: 600  LALRVFDNIPSRDVVSWNSMINAFALGDRWDDALRLFEEMQRENVMPNDVTMVSAASICG 779
             A +VF  I  +DVVSWNSMIN F      D AL LF++M+ E+V  + VTMV   S C 
Sbjct: 184  SACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACA 243

Query: 780  KKCDLELGRRIHAYIQRNDDIEASSILDNALLDMYVKCGSLEDAELLFHSMNTKDSISWT 959
            K  +LE GR++ +YI+ N  +  +  L NA+LDMY KCGS+EDA+ LF +M  KD+++WT
Sbjct: 244  KIRNLEFGRQVCSYIEENR-VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWT 302

Query: 960  TMLVGYCKLGHFHAARHLFDQMPDRDIASWNALISCYEQSGRSKEALDLFHDLQ 1121
            TML GY     + AAR + + MP +DI +WNALIS YEQ+G+  EAL +FH+LQ
Sbjct: 303  TMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQ 356



 Score =  105 bits (261), Expect = 4e-20
 Identities = 60/192 (31%), Positives = 110/192 (57%), Gaps = 5/192 (2%)
 Frame = +3

Query: 561  TLVHFYAACGDSGLALRVFDNIPSRDVVSWNSMINAFALGDRWDDALRLFEEMQ-RENVM 737
            T++  YA   D   A  V +++P +D+V+WN++I+A+    + ++AL +F E+Q ++N+ 
Sbjct: 303  TMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMK 362

Query: 738  PNDVTMVSAASICGKKCDLELGRRIHAYIQRNDDIEASSILDNALLDMYVKCGSLEDAEL 917
             N +T+VS  S C +   LELGR IH+YI+++  I  +  + +AL+ MY KCG LE +  
Sbjct: 363  LNQITLVSTLSACAQVGALELGRWIHSYIKKH-GIRMNFHVTSALIHMYSKCGDLEKSRE 421

Query: 918  LFHSMNTKDSISWTTMLVGYCKLGHFHAARHLFDQMPDRDI----ASWNALISCYEQSGR 1085
            +F+S+  +D   W+ M+ G    G  + A  +F +M + ++     ++  +      +G 
Sbjct: 422  VFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGL 481

Query: 1086 SKEALDLFHDLQ 1121
              EA  LFH ++
Sbjct: 482  VDEAESLFHQME 493



 Score = 76.3 bits (186), Expect = 2e-11
 Identities = 55/237 (23%), Positives = 95/237 (40%)
 Frame = +3

Query: 276  SPDLAYARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPF 455
            S D   AR + +S+P  ++ +WN LI A+     P                  ++ T   
Sbjct: 311  SEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVS 370

Query: 456  XXXXXXXXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIPSR 635
                             H  + K      +  + + L+H Y+ CGD   +  VF+++  R
Sbjct: 371  TLSACAQVGALELGRWIHSYIKKHGI-RMNFHVTSALIHMYSKCGDLEKSREVFNSVEKR 429

Query: 636  DVVSWNSMINAFALGDRWDDALRLFEEMQRENVMPNDVTMVSAASICGKKCDLELGRRIH 815
            DV  W++MI   A+    ++A+ +F +MQ  NV PN VT  +    C     ++    + 
Sbjct: 430  DVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLF 489

Query: 816  AYIQRNDDIEASSILDNALLDMYVKCGSLEDAELLFHSMNTKDSISWTTMLVGYCKL 986
              ++ N  I         ++D+  + G LE A     +M    S S    L+G CK+
Sbjct: 490  HQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKI 546


>ref|XP_006410036.1| hypothetical protein EUTSA_v10016305mg [Eutrema salsugineum]
            gi|557111205|gb|ESQ51489.1| hypothetical protein
            EUTSA_v10016305mg [Eutrema salsugineum]
          Length = 739

 Score =  283 bits (723), Expect = 1e-73
 Identities = 158/358 (44%), Positives = 214/358 (59%), Gaps = 3/358 (0%)
 Frame = +3

Query: 57   SIALPM---RASNESNGICVSVNSNGDDHPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLH 227
            SIA P+   R    SN    + N+    H  L L+D  R  D R + +IH +M+R GL +
Sbjct: 5    SIAQPLSLPRHPTFSNPNQPTTNNERSRH-TLSLID--RCADLRQLKQIHAQMVRTGLFN 61

Query: 228  HPFSASRLLVGASLSPSPDLAYARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXX 407
              +SAS+L   A+LSP   L YA ++FD IP PN F+WNTLIRA+A+GPDP         
Sbjct: 62   DHYSASKLFAIAALSPFASLDYACKVFDQIPQPNSFTWNTLIRAYASGPDPLRSICVFLD 121

Query: 408  XXSDGPDDPDKFTFPFXXXXXXXXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAAC 587
              S+    P+ +TFPF                 HGM VKS     D+F+ N+L+H Y +C
Sbjct: 122  MVSESQCYPNTYTFPFLIKAAAEVSSLSLGQSLHGMAVKSSV-GCDVFVANSLIHCYFSC 180

Query: 588  GDSGLALRVFDNIPSRDVVSWNSMINAFALGDRWDDALRLFEEMQRENVMPNDVTMVSAA 767
            GD   A +VF  I  +DVVSWNSMI  F      D AL LF++M+ E V  + VTMV   
Sbjct: 181  GDLDSACKVFTTIQEKDVVSWNSMITGFVQKGSPDKALELFKKMESEEVKASHVTMVGVL 240

Query: 768  SICGKKCDLELGRRIHAYIQRNDDIEASSILDNALLDMYVKCGSLEDAELLFHSMNTKDS 947
            S C K  +LE GR++ +YI+ N  ++ +  L NA+LDMY KCGS+EDA+ LF +M  KD+
Sbjct: 241  SACAKLRNLEFGRQVCSYIEENG-VKMNLTLANAMLDMYTKCGSIEDAKRLFDTMEVKDN 299

Query: 948  ISWTTMLVGYCKLGHFHAARHLFDQMPDRDIASWNALISCYEQSGRSKEALDLFHDLQ 1121
            ++WTTML G+  L  + AAR + + MP +DI +WNALIS YEQ+G+  EAL +FH+LQ
Sbjct: 300  VTWTTMLDGFAILEDYEAARDVLNSMPKKDIVAWNALISAYEQNGKPNEALLVFHELQ 357



 Score = 95.5 bits (236), Expect = 3e-17
 Identities = 57/190 (30%), Positives = 101/190 (53%), Gaps = 1/190 (0%)
 Frame = +3

Query: 561  TLVHFYAACGDSGLALRVFDNIPSRDVVSWNSMINAFALGDRWDDALRLFEEMQ-RENVM 737
            T++  +A   D   A  V +++P +D+V+WN++I+A+    + ++AL +F E+Q ++N+ 
Sbjct: 304  TMLDGFAILEDYEAARDVLNSMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIK 363

Query: 738  PNDVTMVSAASICGKKCDLELGRRIHAYIQRNDDIEASSILDNALLDMYVKCGSLEDAEL 917
             N +T+VS  S C +   LELGR IH+YI+++  I ++  + +AL+ MY KCG L  A  
Sbjct: 364  LNQITLVSTLSACAQVGALELGRWIHSYIKKHG-IRSNFYVTSALIHMYSKCGDLVKA-- 420

Query: 918  LFHSMNTKDSISWTTMLVGYCKLGHFHAARHLFDQMPDRDIASWNALISCYEQSGRSKEA 1097
                                         R +F+ +  RD+  W+A+I      G   +A
Sbjct: 421  -----------------------------REVFNTVEKRDVFVWSAMIGGLAMHGCGNDA 451

Query: 1098 LDLFHDLQQA 1127
            LD+F+ +Q+A
Sbjct: 452  LDMFYKMQEA 461



 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 67/282 (23%), Positives = 116/282 (41%), Gaps = 7/282 (2%)
 Frame = +3

Query: 282  DLAYARRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXX 461
            D   AR + +S+P  ++ +WN LI A+     P                  ++ T     
Sbjct: 314  DYEAARDVLNSMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTL 373

Query: 462  XXXXXXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIPSRDV 641
                           H  + K     S+ ++ + L+H Y+ CGD   A  VF+ +  RDV
Sbjct: 374  SACAQVGALELGRWIHSYIKKHGI-RSNFYVTSALIHMYSKCGDLVKAREVFNTVEKRDV 432

Query: 642  VSWNSMINAFALGDRWDDALRLFEEMQRENVMPNDVTMVSAASICGKKCDLELGRRIHAY 821
              W++MI   A+    +DAL +F +MQ  NV PN VT  +    C     ++    + + 
Sbjct: 433  FVWSAMIGGLAMHGCGNDALDMFYKMQEANVKPNGVTFTNVFCACSHSGLVDEAESLFSK 492

Query: 822  IQRNDDIEASSILDNALLDMYVKCGSLEDAELLFHSMNTKDSISWTTMLVGYCKLGHFHA 1001
            ++ N  I         ++D+  + G LE A     +M    S S    L+G CK+   HA
Sbjct: 493  MESNYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSASVWGALLGACKI---HA 549

Query: 1002 ARHLFD-------QMPDRDIASWNALISCYEQSGRSKEALDL 1106
              +L +       ++  R+  +   L + Y +SG+ +   +L
Sbjct: 550  NLNLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWESVSEL 591


>gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score =  276 bits (707), Expect = 8e-72
 Identities = 150/337 (44%), Positives = 198/337 (58%), Gaps = 2/337 (0%)
 Frame = +3

Query: 117  SNGDDHPVLQLLDDYRRLDTRTIHRIHCRMLRLGLLHHPFSASRLLVGASLSPSPDLAYA 296
            +N  D  + Q    +++L      +IH +MLR   LH P++AS L   A+ S    L YA
Sbjct: 138  TNVGDRALFQQCTSFKQLK-----QIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYA 192

Query: 297  RRLFDSIPFPNLFSWNTLIRAHAAGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXXXXXXX 476
            R++FD IP PNL+SWN LIRA A   DP            D P  P+KFTFP        
Sbjct: 193  RKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAE 252

Query: 477  XXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIP--SRDVVSW 650
                      HGM +K+ F   D+F+LN+L+HFYA+CG   LA  VF+ I   ++D+VSW
Sbjct: 253  RRCFLVGKAVHGMAIKTSF-GDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSW 311

Query: 651  NSMINAFALGDRWDDALRLFEEMQRENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQR 830
            NSM+  F  G   D AL LFE M+ E V PN VTMVS  S C K  +L LGR++  YI R
Sbjct: 312  NSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDR 371

Query: 831  NDDIEASSILDNALLDMYVKCGSLEDAELLFHSMNTKDSISWTTMLVGYCKLGHFHAARH 1010
            N+ +   ++  NA +DM+VKCG +E A  LF +M  +D +SWTT++ GY K+     AR 
Sbjct: 372  NEMMMNLNVC-NATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARD 430

Query: 1011 LFDQMPDRDIASWNALISCYEQSGRSKEALDLFHDLQ 1121
            +FD MP +DI +WN LIS YEQSGR KEAL +F +LQ
Sbjct: 431  IFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQ 467



 Score =  108 bits (270), Expect = 4e-21
 Identities = 60/200 (30%), Positives = 106/200 (53%), Gaps = 6/200 (3%)
 Frame = +3

Query: 543  DIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSWNSMINAFALGDRWDDALRLFEEMQ 722
            D+    T++  YA   + G+A  +FD++P +D+ +WN +I+ +    R  +AL +F E+Q
Sbjct: 408  DVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQ 467

Query: 723  --RENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQRNDDIEASSILDNALLDMYVKCG 896
              +    P+ VT++S  S C +   +++G  IH YI++ + I+ +  L  +L+DMY K G
Sbjct: 468  LTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKK-ERIQLNRNLATSLIDMYSKSG 526

Query: 897  SLEDAELLFHSMNTKDSISWTTMLVGYCKLGHFHAARHLFDQMPDRDI----ASWNALIS 1064
             +E A  +FHS+  KD   W+ M+ G    G   AA  LF  M +  +     ++  L+ 
Sbjct: 527  DVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLC 586

Query: 1065 CYEQSGRSKEALDLFHDLQQ 1124
                SG   E   LF ++++
Sbjct: 587  ACSHSGLVDEGKRLFDEMER 606



 Score = 77.0 bits (188), Expect = 1e-11
 Identities = 59/239 (24%), Positives = 101/239 (42%), Gaps = 2/239 (0%)
 Frame = +3

Query: 294  ARRLFDSIPFPNLFSWNTLIRAHA-AGPDPXXXXXXXXXXXSDGPDDPDKFTFPFXXXXX 470
            AR +FDS+P  ++ +WN LI  +  +G              +     PD+ T        
Sbjct: 428  ARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSAC 487

Query: 471  XXXXXXXXXXXXHGMVVKSPFFSSDIFILNTLVHFYAACGDSGLALRVFDNIPSRDVVSW 650
                        HG + K      +  +  +L+  Y+  GD   A+ VF +I ++DV  W
Sbjct: 488  AQLGAMDIGEWIHGYIKKERI-QLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVW 546

Query: 651  NSMINAFALGDRWDDALRLFEEMQRENVMPNDVTMVSAASICGKKCDLELGRRIHAYIQR 830
            ++MI   A+  R + A+ LF +MQ   V PN VT  +    C     ++ G+R+   ++R
Sbjct: 547  SAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMER 606

Query: 831  NDDIEASSILDNALLDMYVKCGSLEDAELLFHSMNTKDSIS-WTTMLVGYCKLGHFHAA 1004
               +   +   + ++D+  + G LE+A      M    S S W  +L   C  G+   A
Sbjct: 607  VYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELA 665