BLASTX nr result
ID: Zingiber25_contig00042504
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00042504
(352 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003579552.1| PREDICTED: DNA excision repair protein ERCC-... 71 1e-10
ref|XP_006850532.1| hypothetical protein AMTR_s00159p00042980 [A... 66 4e-09
ref|XP_006653922.1| PREDICTED: DNA excision repair protein ERCC-... 61 1e-07
ref|XP_004159269.1| PREDICTED: DNA excision repair protein ERCC-... 59 9e-07
ref|XP_004143401.1| PREDICTED: DNA excision repair protein ERCC-... 59 9e-07
gb|EEE61977.1| hypothetical protein OsJ_16754 [Oryza sativa Japo... 59 9e-07
emb|CAE05788.2| OSJNBb0020J19.17 [Oryza sativa Japonica Group] 59 9e-07
dbj|BAK07412.1| predicted protein [Hordeum vulgare subsp. vulgare] 57 3e-06
gb|EEC78323.1| hypothetical protein OsI_18057 [Oryza sativa Indi... 57 3e-06
tpg|DAA36830.1| TPA: hypothetical protein ZEAMMB73_340761 [Zea m... 56 4e-06
tpg|DAA36829.1| TPA: hypothetical protein ZEAMMB73_340761 [Zea m... 56 4e-06
tpg|DAA36828.1| TPA: hypothetical protein ZEAMMB73_340761 [Zea m... 56 4e-06
ref|XP_004959923.1| PREDICTED: DNA excision repair protein ERCC-... 56 6e-06
ref|XP_002448839.1| hypothetical protein SORBIDRAFT_06g034160 [S... 56 6e-06
>ref|XP_003579552.1| PREDICTED: DNA excision repair protein ERCC-6-like [Brachypodium
distachyon]
Length = 999
Score = 71.2 bits (173), Expect = 1e-10
Identities = 46/109 (42%), Positives = 58/109 (53%), Gaps = 15/109 (13%)
Frame = +2
Query: 68 PLSLNERNARLLDSLSRSRNPKP-------------RSEVRVRKVKIEGRRRLCKLSSA- 205
P LN+R RL S R +NP P E + RKVK+ GRRRLCK+SS+
Sbjct: 34 PNGLNDRLLRLAQSRPRPQNPNPDPLPPPPPPPEEVAGEPQDRKVKLAGRRRLCKISSSS 93
Query: 206 -DAESDDEKRLXXXXXXXXXXXXXXXIRDILDDLTARMDDLSVEKPPPK 349
DA++DDE IRDILDDLT R+D LSV++P P+
Sbjct: 94 PDADADDE---------------GDNIRDILDDLTTRLDSLSVDRPKPR 127
>ref|XP_006850532.1| hypothetical protein AMTR_s00159p00042980 [Amborella trichopoda]
gi|548854183|gb|ERN12113.1| hypothetical protein
AMTR_s00159p00042980 [Amborella trichopoda]
Length = 1019
Score = 66.2 bits (160), Expect = 4e-09
Identities = 41/104 (39%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Frame = +2
Query: 56 EERKPLSLNERNARLLDSLSRSRNPKPRSEVR---------VRKVKIEGRRRLCKLSSAD 208
E R P SLN+RNA+LL+ L+ + P + + V KVK++GRRRLCKLSS D
Sbjct: 2 ERRTPRSLNQRNAQLLEDLANKTSGIPPTSEKANALHCGEMVNKVKLKGRRRLCKLSSRD 61
Query: 209 AESDD-EKRLXXXXXXXXXXXXXXXIRDILDDLTARMDDLSVEK 337
SD + IR IL+DL++++D LS+EK
Sbjct: 62 ENSDSYGENTVSEDATSSAIDEPSDIRSILNDLSSKLDSLSIEK 105
>ref|XP_006653922.1| PREDICTED: DNA excision repair protein ERCC-6-like [Oryza
brachyantha]
Length = 961
Score = 61.2 bits (147), Expect = 1e-07
Identities = 38/98 (38%), Positives = 50/98 (51%)
Frame = +2
Query: 47 MTEEERKPLSLNERNARLLDSLSRSRNPKPRSEVRVRKVKIEGRRRLCKLSSADAESDDE 226
M RK +N + ++ + +R PR+ KVK+ GRRRLCKLSSA +S D
Sbjct: 1 MANVARKAYGINRLKSETIEEIDTNR---PRAGPEPAKVKLPGRRRLCKLSSAPDDSADS 57
Query: 227 KRLXXXXXXXXXXXXXXXIRDILDDLTARMDDLSVEKP 340
IRDILDDLT R+D LSV++P
Sbjct: 58 ------------------IRDILDDLTTRLDSLSVDRP 77
>ref|XP_004159269.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cucumis
sativus]
Length = 565
Score = 58.5 bits (140), Expect = 9e-07
Identities = 44/118 (37%), Positives = 55/118 (46%), Gaps = 22/118 (18%)
Frame = +2
Query: 50 TEEERKPLSLNERNARLLDSLSRSRNPKPRS---EVRVRKVKIEGRRRLCKLSSADAE-- 214
T +KPLSLN+R+ RLL LS P + E + KVKI GRRRLCKLSS + +
Sbjct: 5 TTSRKKPLSLNDRHYRLLQDLSAPPKPSLATAAVEEKPTKVKINGRRRLCKLSSREDDCL 64
Query: 215 -----------------SDDEKRLXXXXXXXXXXXXXXXIRDILDDLTARMDDLSVEK 337
D IRDIL+DL+AR++ LSVEK
Sbjct: 65 DNPEGFYFNAPNFSGITDFDSPSPPPPLPVENRVNKGSEIRDILNDLSARLELLSVEK 122
>ref|XP_004143401.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cucumis
sativus]
Length = 1016
Score = 58.5 bits (140), Expect = 9e-07
Identities = 44/118 (37%), Positives = 55/118 (46%), Gaps = 22/118 (18%)
Frame = +2
Query: 50 TEEERKPLSLNERNARLLDSLSRSRNPKPRS---EVRVRKVKIEGRRRLCKLSSADAE-- 214
T +KPLSLN+R+ RLL LS P + E + KVKI GRRRLCKLSS + +
Sbjct: 5 TTSRKKPLSLNDRHYRLLQDLSAPPKPSLATAAVEEKPTKVKINGRRRLCKLSSRENDCL 64
Query: 215 -----------------SDDEKRLXXXXXXXXXXXXXXXIRDILDDLTARMDDLSVEK 337
D IRDIL+DL+AR++ LSVEK
Sbjct: 65 DNPEGFYFNAPNFSGITDFDSPSPPPPLPVENRVNKGSEIRDILNDLSARLELLSVEK 122
>gb|EEE61977.1| hypothetical protein OsJ_16754 [Oryza sativa Japonica Group]
Length = 1678
Score = 58.5 bits (140), Expect = 9e-07
Identities = 44/108 (40%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Frame = +2
Query: 68 PLSLNERNARLLDSLSR--SRNPKPR-------------SEVRVRKVKIEGRRRLCKLSS 202
P LN+R RL + R S+NP P E KVK+ GRRRLCKLS+
Sbjct: 30 PNGLNDRLLRLTRTHQRGPSQNPNPNPNPNPKPPPPPPPQEPEPAKVKLAGRRRLCKLST 89
Query: 203 ADAES--DDEKRLXXXXXXXXXXXXXXXIRDILDDLTARMDDLSVEKP 340
A ES DD+ IRDILDDLT R+D LSV++P
Sbjct: 90 AGDESAGDDDS-----------------IRDILDDLTTRLDSLSVDRP 120
>emb|CAE05788.2| OSJNBb0020J19.17 [Oryza sativa Japonica Group]
Length = 1634
Score = 58.5 bits (140), Expect = 9e-07
Identities = 44/108 (40%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Frame = +2
Query: 68 PLSLNERNARLLDSLSR--SRNPKPR-------------SEVRVRKVKIEGRRRLCKLSS 202
P LN+R RL + R S+NP P E KVK+ GRRRLCKLS+
Sbjct: 30 PNGLNDRLLRLTRTHQRGPSQNPNPNPNPNPKPPPPPPPQEPEPAKVKLAGRRRLCKLST 89
Query: 203 ADAES--DDEKRLXXXXXXXXXXXXXXXIRDILDDLTARMDDLSVEKP 340
A ES DD+ IRDILDDLT R+D LSV++P
Sbjct: 90 AGDESAGDDDS-----------------IRDILDDLTTRLDSLSVDRP 120
>dbj|BAK07412.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1148
Score = 56.6 bits (135), Expect = 3e-06
Identities = 39/99 (39%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Frame = +2
Query: 68 PLSLNERNARLLDSLSRS-RNPKPRSEVRV-------RKVKIEGRRRLCKLSSADAESDD 223
P LN+R R S R +NP P RKVK+ GRRRLCKLSS+ D
Sbjct: 37 PNGLNDRLLRFTQSRPRPPQNPNPPPPAHAHQPLPQDRKVKLAGRRRLCKLSSSPDHDHD 96
Query: 224 EKRLXXXXXXXXXXXXXXXIRDILDDLTARMDDLSVEKP 340
+ IRDILDDL R+D LSV++P
Sbjct: 97 KDE--------------DSIRDILDDLATRLDSLSVDRP 121
>gb|EEC78323.1| hypothetical protein OsI_18057 [Oryza sativa Indica Group]
Length = 987
Score = 56.6 bits (135), Expect = 3e-06
Identities = 43/105 (40%), Positives = 52/105 (49%), Gaps = 15/105 (14%)
Frame = +2
Query: 68 PLSLNERNARLLDSLSR--SRNPKPR-----------SEVRVRKVKIEGRRRLCKLSSAD 208
P LN+R RL + R S+NP P E KVK+ GRRRLCKLS+A
Sbjct: 30 PNGLNDRLLRLTRTHQRGPSQNPNPNPNPKPPPPPPPQEPEPAKVKLAGRRRLCKLSTAG 89
Query: 209 AES--DDEKRLXXXXXXXXXXXXXXXIRDILDDLTARMDDLSVEK 337
ES DD+ IRDILDDLT R+D LSV++
Sbjct: 90 DESAGDDDS-----------------IRDILDDLTTRLDSLSVDR 117
>tpg|DAA36830.1| TPA: hypothetical protein ZEAMMB73_340761 [Zea mays]
Length = 894
Score = 56.2 bits (134), Expect = 4e-06
Identities = 39/103 (37%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Frame = +2
Query: 68 PLSLNERNARLLDSLSR-SRNPKPR-----------SEVRVRKVKIEGRRRLCKLSSADA 211
P LN+ R SL R ++NP P +E +V KVK+ GRRRLCKL++
Sbjct: 38 PNGLNDHLLRFTRSLQRPTQNPNPSPNPPPPPPPAAAEEQVEKVKLAGRRRLCKLATTTT 97
Query: 212 ESDDEKRLXXXXXXXXXXXXXXXIRDILDDLTARMDDLSVEKP 340
+ +R+ I DILDDLT R D LSV+KP
Sbjct: 98 AT---QRVDEEEAEWDNQDDGESILDILDDLTTRFDSLSVQKP 137
>tpg|DAA36829.1| TPA: hypothetical protein ZEAMMB73_340761 [Zea mays]
Length = 961
Score = 56.2 bits (134), Expect = 4e-06
Identities = 39/103 (37%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Frame = +2
Query: 68 PLSLNERNARLLDSLSR-SRNPKPR-----------SEVRVRKVKIEGRRRLCKLSSADA 211
P LN+ R SL R ++NP P +E +V KVK+ GRRRLCKL++
Sbjct: 38 PNGLNDHLLRFTRSLQRPTQNPNPSPNPPPPPPPAAAEEQVEKVKLAGRRRLCKLATTTT 97
Query: 212 ESDDEKRLXXXXXXXXXXXXXXXIRDILDDLTARMDDLSVEKP 340
+ +R+ I DILDDLT R D LSV+KP
Sbjct: 98 AT---QRVDEEEAEWDNQDDGESILDILDDLTTRFDSLSVQKP 137
>tpg|DAA36828.1| TPA: hypothetical protein ZEAMMB73_340761 [Zea mays]
Length = 1048
Score = 56.2 bits (134), Expect = 4e-06
Identities = 39/103 (37%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Frame = +2
Query: 68 PLSLNERNARLLDSLSR-SRNPKPR-----------SEVRVRKVKIEGRRRLCKLSSADA 211
P LN+ R SL R ++NP P +E +V KVK+ GRRRLCKL++
Sbjct: 38 PNGLNDHLLRFTRSLQRPTQNPNPSPNPPPPPPPAAAEEQVEKVKLAGRRRLCKLATTTT 97
Query: 212 ESDDEKRLXXXXXXXXXXXXXXXIRDILDDLTARMDDLSVEKP 340
+ +R+ I DILDDLT R D LSV+KP
Sbjct: 98 AT---QRVDEEEAEWDNQDDGESILDILDDLTTRFDSLSVQKP 137
>ref|XP_004959923.1| PREDICTED: DNA excision repair protein ERCC-6-like [Setaria
italica]
Length = 1037
Score = 55.8 bits (133), Expect = 6e-06
Identities = 41/105 (39%), Positives = 51/105 (48%), Gaps = 12/105 (11%)
Frame = +2
Query: 68 PLSLNERNARLLDSLSRSRNPKPR---------SEVRVRKVKIEGRRRLCKLSSADAES- 217
P LN+R RL S + NP P +E RKVK+ GRRRLCKL++
Sbjct: 37 PNGLNDRLLRLARS-RQDPNPNPNPIPPPEAAAAEEEGRKVKLAGRRRLCKLAATATHQL 95
Query: 218 --DDEKRLXXXXXXXXXXXXXXXIRDILDDLTARMDDLSVEKPPP 346
D+E+ IRDI+DDLT R+D LSV KP P
Sbjct: 96 LQDEEE----------DHDDCESIRDIMDDLTTRLDSLSVRKPNP 130
>ref|XP_002448839.1| hypothetical protein SORBIDRAFT_06g034160 [Sorghum bicolor]
gi|241940022|gb|EES13167.1| hypothetical protein
SORBIDRAFT_06g034160 [Sorghum bicolor]
Length = 1042
Score = 55.8 bits (133), Expect = 6e-06
Identities = 41/108 (37%), Positives = 52/108 (48%), Gaps = 15/108 (13%)
Frame = +2
Query: 68 PLSLNERNARLLDSLSRSR-------NPKPR--------SEVRVRKVKIEGRRRLCKLSS 202
P LN+ R S RS NP+P+ +E +V KVK+ GRRRLCKL++
Sbjct: 35 PNGLNDHLLRFTRSFQRSTQNPNPSPNPQPQPPPPPEATAEEQVGKVKLAGRRRLCKLAT 94
Query: 203 ADAESDDEKRLXXXXXXXXXXXXXXXIRDILDDLTARMDDLSVEKPPP 346
D E+ + I DILDDLT R D LSV+KP P
Sbjct: 95 TIQLVDGEEEVDGDNQDDSES-----IFDILDDLTTRFDSLSVQKPGP 137