BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00042477
         (303 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39775.3| unnamed protein product [Vitis vinifera]              142   6e-32
ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containi...   142   6e-32
emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]   142   6e-32
gb|EOY11964.1| Tetratricopeptide repeat-like superfamily protein...   139   3e-31
ref|XP_004296321.1| PREDICTED: pentatricopeptide repeat-containi...   139   4e-31
ref|XP_006474838.1| PREDICTED: pentatricopeptide repeat-containi...   138   9e-31
gb|EXC21533.1| hypothetical protein L484_014888 [Morus notabilis]     137   1e-30
gb|EXB50999.1| hypothetical protein L484_023701 [Morus notabilis]     137   1e-30
ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containi...   136   3e-30
ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containi...   136   3e-30
ref|XP_006452639.1| hypothetical protein CICLE_v10010822mg [Citr...   135   4e-30
gb|EMJ08282.1| hypothetical protein PRUPE_ppa024338mg, partial [...   134   1e-29
ref|XP_004244339.1| PREDICTED: pentatricopeptide repeat-containi...   133   3e-29
ref|XP_002300388.2| hypothetical protein POPTR_0001s37860g [Popu...   130   1e-28
ref|XP_004955182.1| PREDICTED: pentatricopeptide repeat-containi...   130   2e-28
ref|XP_006847845.1| hypothetical protein AMTR_s00029p00062590 [A...   117   2e-24
ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containi...   114   1e-23
gb|AEP33755.1| chloroplast biogenesis 19, partial [Olimarabidops...   113   2e-23
emb|CBI20961.3| unnamed protein product [Vitis vinifera]              113   3e-23
ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containi...   113   3e-23

>emb|CBI39775.3| unnamed protein product [Vitis vinifera]
          Length = 599

 Score =  142 bits (357), Expect = 6e-32
 Identities = 68/100 (68%), Positives = 81/100 (81%)
 Frame = +2

Query: 2   LDLGKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIG 181
           LDLG RIH ++ +    K NVR+ NTLIDMY+KCGCL+ A +VF+EM ERTVVSWSAMIG
Sbjct: 243 LDLGMRIHEYSNRHGF-KRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIG 301

Query: 182 GHAMHGQAEEALELFSKMEEASVEPNAVTFVGLLHACSHI 301
           G AMHG+AEEAL LFS M +  +EPN VTF+GLLHACSH+
Sbjct: 302 GLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHM 341


>ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 632

 Score =  142 bits (357), Expect = 6e-32
 Identities = 68/100 (68%), Positives = 81/100 (81%)
 Frame = +2

Query: 2   LDLGKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIG 181
           LDLG RIH ++ +    K NVR+ NTLIDMY+KCGCL+ A +VF+EM ERTVVSWSAMIG
Sbjct: 276 LDLGMRIHEYSNRHGF-KRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIG 334

Query: 182 GHAMHGQAEEALELFSKMEEASVEPNAVTFVGLLHACSHI 301
           G AMHG+AEEAL LFS M +  +EPN VTF+GLLHACSH+
Sbjct: 335 GLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHM 374



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 36/83 (43%), Positives = 52/83 (62%)
 Frame = +2

Query: 53  KNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIGGHAMHGQAEEALELFSK 232
           + +V   N +I   IK G  + A  +F  M ER V SW++MI G+   G+A+EA+ LF+K
Sbjct: 191 QRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAK 250

Query: 233 MEEASVEPNAVTFVGLLHACSHI 301
           MEEA V+ N VT V +L AC+ +
Sbjct: 251 MEEAGVKCNEVTVVAVLAACADL 273


>emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
          Length = 606

 Score =  142 bits (357), Expect = 6e-32
 Identities = 68/100 (68%), Positives = 81/100 (81%)
 Frame = +2

Query: 2   LDLGKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIG 181
           LDLG RIH ++ +    K NVR+ NTLIDMY+KCGCL+ A +VF+EM ERTVVSWSAMIG
Sbjct: 276 LDLGMRIHEYSNRHGF-KRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIG 334

Query: 182 GHAMHGQAEEALELFSKMEEASVEPNAVTFVGLLHACSHI 301
           G AMHG+AEEAL LFS M +  +EPN VTF+GLLHACSH+
Sbjct: 335 GLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHM 374



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 36/83 (43%), Positives = 52/83 (62%)
 Frame = +2

Query: 53  KNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIGGHAMHGQAEEALELFSK 232
           + +V   N +I   IK G  + A  +F  M ER V SW++MI G+   G+A+EA+ LF+K
Sbjct: 191 QRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAK 250

Query: 233 MEEASVEPNAVTFVGLLHACSHI 301
           MEEA V+ N VT V +L AC+ +
Sbjct: 251 MEEAGVKCNEVTVVAVLAACADL 273


>gb|EOY11964.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 615

 Score =  139 bits (351), Expect = 3e-31
 Identities = 68/100 (68%), Positives = 81/100 (81%)
 Frame = +2

Query: 2   LDLGKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIG 181
           LDLGKR+H ++ +    KN VRV NTLIDMY+KCGCL+ AR+VF+EM ERTVVSWSAMI 
Sbjct: 259 LDLGKRVHEYSKRSGFGKN-VRVLNTLIDMYVKCGCLEEARRVFNEMEERTVVSWSAMIQ 317

Query: 182 GHAMHGQAEEALELFSKMEEASVEPNAVTFVGLLHACSHI 301
           G AMHGQA+EA+ +FS M E  V PN VTF+GLLHACSH+
Sbjct: 318 GLAMHGQAQEAVRVFSMMIEMGVMPNGVTFIGLLHACSHM 357



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/76 (39%), Positives = 43/76 (56%)
 Frame = +2

Query: 74  NTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIGGHAMHGQAEEALELFSKMEEASVE 253
           N +I   +K G  + A   F  M ER V SW+ MI G    G+ +E +ELF +M++  VE
Sbjct: 181 NVMITYLVKSGDFEGAYGFFSRMPERNVRSWTMMISGCVHCGKPKEGVELFIEMQKIGVE 240

Query: 254 PNAVTFVGLLHACSHI 301
            N VT V +L AC+ +
Sbjct: 241 ANEVTVVAVLAACADL 256


>ref|XP_004296321.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 465

 Score =  139 bits (350), Expect = 4e-31
 Identities = 66/100 (66%), Positives = 81/100 (81%)
 Frame = +2

Query: 2   LDLGKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIG 181
           LDLG+R+H ++ +    +N V +CNTLI+MY+KCGCL+ AR+VFD M +RTVVSWSAMI 
Sbjct: 109 LDLGRRVHEYSSRSGFGRN-VWICNTLIEMYVKCGCLEDARRVFDAMKDRTVVSWSAMIS 167

Query: 182 GHAMHGQAEEALELFSKMEEASVEPNAVTFVGLLHACSHI 301
           G AMHGQAEEAL LFS M E  ++PN VTFVGLLHACSH+
Sbjct: 168 GLAMHGQAEEALRLFSNMVEIGMDPNHVTFVGLLHACSHM 207



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 32/83 (38%), Positives = 50/83 (60%)
 Frame = +2

Query: 53  KNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIGGHAMHGQAEEALELFSK 232
           + +V   NT++ + +K G ++ A  +F  M ER V SW+ MI G    G+ +EA+ +F +
Sbjct: 24  QRDVVTWNTMMTVLVKRGDVEEAYDLFLRMPERNVRSWTLMISGFVQRGKPKEAVRVFLE 83

Query: 233 MEEASVEPNAVTFVGLLHACSHI 301
           MEEA V  N VT V +L AC+ +
Sbjct: 84  MEEAGVRANEVTVVAVLAACADL 106


>ref|XP_006474838.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Citrus sinensis]
          Length = 624

 Score =  138 bits (347), Expect = 9e-31
 Identities = 64/100 (64%), Positives = 81/100 (81%)
 Frame = +2

Query: 2   LDLGKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIG 181
           LDLG+R+H ++ Q    +N +RVCNTLIDMY+KCGCL+ AR+VF EM ERTV +WSAMI 
Sbjct: 269 LDLGRRVHEYSNQSGFRRN-IRVCNTLIDMYVKCGCLEGARRVFIEMEERTVFTWSAMIQ 327

Query: 182 GHAMHGQAEEALELFSKMEEASVEPNAVTFVGLLHACSHI 301
           G A+HGQA+EAL  F+KM E  ++PN VTF+GLLHACSH+
Sbjct: 328 GFAIHGQAKEALTSFNKMIEIGIKPNGVTFIGLLHACSHM 367



 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 36/85 (42%), Positives = 55/85 (64%)
 Frame = +2

Query: 47  LHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIGGHAMHGQAEEALELF 226
           + + +V   N +I   IK G +  A ++F +M ER+V SW+ MI G+  +G+A+EA+ELF
Sbjct: 182 MSQRDVVTWNIMITQLIKRGDIVEASELFRKMPERSVRSWTGMISGYVQYGKAKEAVELF 241

Query: 227 SKMEEASVEPNAVTFVGLLHACSHI 301
            +MEE  V PN VT V +L AC+ +
Sbjct: 242 MEMEEVGVRPNEVTVVAVLAACADL 266


>gb|EXC21533.1| hypothetical protein L484_014888 [Morus notabilis]
          Length = 636

 Score =  137 bits (346), Expect = 1e-30
 Identities = 67/100 (67%), Positives = 82/100 (82%)
 Frame = +2

Query: 2   LDLGKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIG 181
           L LG+RIH ++ Q S   +NVRV NTLID+Y+KCGCL+ AR VFD+M ERTVVSWSAMI 
Sbjct: 280 LFLGRRIHEYSNQSSFG-SNVRVSNTLIDLYVKCGCLEDARGVFDKMEERTVVSWSAMIA 338

Query: 182 GHAMHGQAEEALELFSKMEEASVEPNAVTFVGLLHACSHI 301
           G AMHG+AEEAL+LF+ M +  V+PN VTF+GLLHACSH+
Sbjct: 339 GLAMHGKAEEALKLFTSMTQVGVKPNGVTFIGLLHACSHM 378



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 30/76 (39%), Positives = 45/76 (59%)
 Frame = +2

Query: 74  NTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIGGHAMHGQAEEALELFSKMEEASVE 253
           N ++   IK   ++ A  +F EM ER V SW+ MI G    G+ +EA  LF +ME+A ++
Sbjct: 202 NIMMTQLIKRDDVEQAYGLFAEMPERNVRSWTLMIAGFVRCGKPKEAANLFLEMEKAGIK 261

Query: 254 PNAVTFVGLLHACSHI 301
           PN  T V +L AC+ +
Sbjct: 262 PNEATVVAVLAACADL 277


>gb|EXB50999.1| hypothetical protein L484_023701 [Morus notabilis]
          Length = 636

 Score =  137 bits (345), Expect = 1e-30
 Identities = 68/100 (68%), Positives = 81/100 (81%)
 Frame = +2

Query: 2   LDLGKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIG 181
           L LG+RIH ++ +     +NVRV NTLIDMY+KCGCL+ AR VFD+M ERTVVSWSAMI 
Sbjct: 280 LFLGRRIHEYSNRSGFG-SNVRVSNTLIDMYVKCGCLEDARGVFDKMEERTVVSWSAMIA 338

Query: 182 GHAMHGQAEEALELFSKMEEASVEPNAVTFVGLLHACSHI 301
           G AMHGQAEEAL+LFS M +  V+PN VTF+GLLHACSH+
Sbjct: 339 GLAMHGQAEEALKLFSTMIQVGVKPNGVTFIGLLHACSHM 378



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 36/97 (37%), Positives = 54/97 (55%)
 Frame = +2

Query: 11  GKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIGGHA 190
           G+  +A  M   +   +V   N ++   IK   ++ A  +F EM ER V SW+ MI G  
Sbjct: 181 GEMGNARLMFDKMPHRDVVAWNIMMTQLIKRDEVEQAYGLFAEMPERNVRSWTLMIAGFV 240

Query: 191 MHGQAEEALELFSKMEEASVEPNAVTFVGLLHACSHI 301
             G+  EA+ LF +ME+A V+PN VT V +L AC+ +
Sbjct: 241 QSGKPREAVNLFLEMEKAGVKPNEVTVVAVLAACADL 277


>ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 583

 Score =  136 bits (342), Expect = 3e-30
 Identities = 65/100 (65%), Positives = 80/100 (80%)
 Frame = +2

Query: 2   LDLGKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIG 181
           L LG+RIH F+ +    KN +RVCNTLIDMY+KCGCL+ A ++FD M ERTVVSWSAMI 
Sbjct: 261 LVLGRRIHDFSNRSGYEKN-IRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIA 319

Query: 182 GHAMHGQAEEALELFSKMEEASVEPNAVTFVGLLHACSHI 301
           G A HG+AE+AL LF+KM    V+PNAVTF+G+LHACSH+
Sbjct: 320 GLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHM 359



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 31/126 (24%)
 Frame = +2

Query: 11  GKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFD------------------ 136
           GK +H +  +  L ++N+ + N ++ +Y  CG + +AR+VFD                  
Sbjct: 132 GKIVHGYVEKLGL-QSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLV 190

Query: 137 -------------EMAERTVVSWSAMIGGHAMHGQAEEALELFSKMEEASVEPNAVTFVG 277
                        EM ER V SW++MIGG+A  G+++EA++LF +ME+A + PN VT V 
Sbjct: 191 KMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVA 250

Query: 278 LLHACS 295
           +L AC+
Sbjct: 251 VLVACA 256


>ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 617

 Score =  136 bits (342), Expect = 3e-30
 Identities = 65/100 (65%), Positives = 80/100 (80%)
 Frame = +2

Query: 2   LDLGKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIG 181
           L LG+RIH F+ +    KN +RVCNTLIDMY+KCGCL+ A ++FD M ERTVVSWSAMI 
Sbjct: 261 LVLGRRIHDFSNRSGYEKN-IRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIA 319

Query: 182 GHAMHGQAEEALELFSKMEEASVEPNAVTFVGLLHACSHI 301
           G A HG+AE+AL LF+KM    V+PNAVTF+G+LHACSH+
Sbjct: 320 GLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHM 359



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 31/126 (24%)
 Frame = +2

Query: 11  GKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFD------------------ 136
           GK +H +  +  L ++N+ + N ++ +Y  CG + +AR+VFD                  
Sbjct: 132 GKIVHGYVEKLGL-QSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLV 190

Query: 137 -------------EMAERTVVSWSAMIGGHAMHGQAEEALELFSKMEEASVEPNAVTFVG 277
                        EM ER V SW++MIGG+A  G+++EA++LF +ME+A + PN VT V 
Sbjct: 191 KMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVA 250

Query: 278 LLHACS 295
           +L AC+
Sbjct: 251 VLVACA 256


>ref|XP_006452639.1| hypothetical protein CICLE_v10010822mg [Citrus clementina]
           gi|557555865|gb|ESR65879.1| hypothetical protein
           CICLE_v10010822mg [Citrus clementina]
          Length = 625

 Score =  135 bits (341), Expect = 4e-30
 Identities = 63/100 (63%), Positives = 80/100 (80%)
 Frame = +2

Query: 2   LDLGKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIG 181
           LDLG+R+H ++ Q    +N +RVCNTLIDMY+KCGCL+ AR+VF EM ERTV +WSAMI 
Sbjct: 269 LDLGRRVHEYSNQSGFRRN-IRVCNTLIDMYVKCGCLEGARRVFIEMEERTVFTWSAMIQ 327

Query: 182 GHAMHGQAEEALELFSKMEEASVEPNAVTFVGLLHACSHI 301
           G A+HGQA+EAL  F+KM E  ++PN VTF+GLLHAC H+
Sbjct: 328 GLAIHGQAKEALTSFNKMIEIGIKPNGVTFIGLLHACGHM 367



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 34/85 (40%), Positives = 53/85 (62%)
 Frame = +2

Query: 47  LHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIGGHAMHGQAEEALELF 226
           + + +V   N +I   IK G +  A ++F +M ER+V SW+ MI G+   G+ +EA+ELF
Sbjct: 182 MSQRDVVTWNIMITQLIKRGDIVEASELFRKMPERSVRSWTGMISGYVQCGKPKEAVELF 241

Query: 227 SKMEEASVEPNAVTFVGLLHACSHI 301
            +ME+  V PN VT V +L AC+ +
Sbjct: 242 MEMEQVGVRPNEVTVVAVLAACADL 266


>gb|EMJ08282.1| hypothetical protein PRUPE_ppa024338mg, partial [Prunus persica]
          Length = 611

 Score =  134 bits (338), Expect = 1e-29
 Identities = 66/100 (66%), Positives = 78/100 (78%)
 Frame = +2

Query: 2   LDLGKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIG 181
           L LG+RIH ++ Q    +N  R+ NTLI+MY+KCGCL+ A  VFD M ERTVVSWSAMI 
Sbjct: 255 LGLGRRIHEYSNQSGFSRN-ARISNTLIEMYVKCGCLEDASTVFDGMKERTVVSWSAMIA 313

Query: 182 GHAMHGQAEEALELFSKMEEASVEPNAVTFVGLLHACSHI 301
           G AMHGQAEEAL LFS+M +  ++PN VTFVGLLHACSHI
Sbjct: 314 GLAMHGQAEEALRLFSRMIQTGMDPNDVTFVGLLHACSHI 353



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 31/76 (40%), Positives = 47/76 (61%)
 Frame = +2

Query: 74  NTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIGGHAMHGQAEEALELFSKMEEASVE 253
           N ++   +K G ++ A  +F  M +R+V SW+ MI G    G+ +EA+ LF +MEEA V 
Sbjct: 177 NIMMTQLVKRGDIKEAYDLFSRMPKRSVRSWTLMISGFVQCGKPKEAISLFLEMEEAGVR 236

Query: 254 PNAVTFVGLLHACSHI 301
           PN VT V +L AC+ +
Sbjct: 237 PNEVTVVAVLAACADL 252


>ref|XP_004244339.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Solanum lycopersicum]
          Length = 626

 Score =  133 bits (334), Expect = 3e-29
 Identities = 61/100 (61%), Positives = 80/100 (80%)
 Frame = +2

Query: 2   LDLGKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIG 181
           LDLG+RIH ++ +    +N V +CNTLIDMYIKCGCL+ A+ VFDEM E T+VSWSAMI 
Sbjct: 270 LDLGRRIHEYSNKSGFRRN-VHICNTLIDMYIKCGCLEAAKAVFDEMKEPTIVSWSAMIQ 328

Query: 182 GHAMHGQAEEALELFSKMEEASVEPNAVTFVGLLHACSHI 301
           G A+HG  +EALELF++M +  ++PN VTF+G+LHACSH+
Sbjct: 329 GLAIHGHGDEALELFNEMIKMGMKPNEVTFLGILHACSHM 368



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/92 (31%), Positives = 46/92 (50%)
 Frame = +2

Query: 11  GKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIGGHA 190
           G+ +H +  +     N V + N L+ +Y  CG    A  +FD+M +R VVSW+ MI   +
Sbjct: 141 GRIVHGYIEKLGFQSNLV-LLNALLHLYATCGATDDAILLFDKMPQRDVVSWNIMITQLS 199

Query: 191 MHGQAEEALELFSKMEEASVEPNAVTFVGLLH 286
             G  + A +LF KM E ++        G +H
Sbjct: 200 KKGDVDGAFDLFGKMPERNLRSWTAMITGFVH 231


>ref|XP_002300388.2| hypothetical protein POPTR_0001s37860g [Populus trichocarpa]
           gi|550349131|gb|EEE85193.2| hypothetical protein
           POPTR_0001s37860g [Populus trichocarpa]
          Length = 595

 Score =  130 bits (328), Expect = 1e-28
 Identities = 62/84 (73%), Positives = 72/84 (85%)
 Frame = +2

Query: 50  HKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIGGHAMHGQAEEALELFS 229
           ++ NV VCNTLIDMY+KCGCL+ AR+VF EM ERTVVSWSAMI G AMHGQAEEAL LFS
Sbjct: 254 NERNVHVCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFS 313

Query: 230 KMEEASVEPNAVTFVGLLHACSHI 301
           +M +  V+PN VTF+GLLHACSH+
Sbjct: 314 EMIKLGVKPNGVTFIGLLHACSHM 337


>ref|XP_004955182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Setaria italica]
          Length = 548

 Score =  130 bits (326), Expect = 2e-28
 Identities = 61/100 (61%), Positives = 75/100 (75%)
 Frame = +2

Query: 2   LDLGKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIG 181
           LDLG+++H +A +   +  NV VCN  IDMY+KCGC+  AR VFD M  RTVVSWSAMI 
Sbjct: 192 LDLGRKVHGYAKRQG-YSRNVLVCNAAIDMYVKCGCVDAARGVFDAMDGRTVVSWSAMIC 250

Query: 182 GHAMHGQAEEALELFSKMEEASVEPNAVTFVGLLHACSHI 301
           GHAMHG+ ++ALELF+ M    + PN VTFVGLLHACSH+
Sbjct: 251 GHAMHGEGDKALELFAAMRRRGMLPNGVTFVGLLHACSHM 290



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/76 (40%), Positives = 45/76 (59%)
 Frame = +2

Query: 74  NTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIGGHAMHGQAEEALELFSKMEEASVE 253
           N L+      G +  A ++FDEM E +V SW+A++ G A  G+  +AL +F  ME A V 
Sbjct: 114 NILLTALAARGRVAEALELFDEMPEPSVRSWTALVAGFAQSGRPADALRVFRDMEGAGVA 173

Query: 254 PNAVTFVGLLHACSHI 301
           PN VT V +L AC+ +
Sbjct: 174 PNEVTVVAVLAACADV 189


>ref|XP_006847845.1| hypothetical protein AMTR_s00029p00062590 [Amborella trichopoda]
           gi|548851150|gb|ERN09426.1| hypothetical protein
           AMTR_s00029p00062590 [Amborella trichopoda]
          Length = 625

 Score =  117 bits (293), Expect = 2e-24
 Identities = 54/96 (56%), Positives = 72/96 (75%)
 Frame = +2

Query: 11  GKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIGGHA 190
           GK IH F+++  +H + + VCN LIDMY KCG L+LAR+VFD M ER V++W+AMI G+ 
Sbjct: 367 GKEIHGFSVKNHIHWDTI-VCNALIDMYSKCGSLELARRVFDRMPERDVITWTAMIAGYG 425

Query: 191 MHGQAEEALELFSKMEEASVEPNAVTFVGLLHACSH 298
           MHG  E+A+ LFS M ++ V P+ VTFVGLL +CSH
Sbjct: 426 MHGNGEKAVHLFSLMHQSGVRPDYVTFVGLLSSCSH 461



 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 44/100 (44%), Positives = 66/100 (66%)
 Frame = +2

Query: 2   LDLGKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIG 181
           L +GK IH   ++ S +K +V VCN L+ M  KCG L  A++VF++M ++ VVSW+AMI 
Sbjct: 161 LQMGKSIH-HQIERSNYKGDVYVCNALVAMLAKCGDLIEAQRVFNQMTQKNVVSWTAMIA 219

Query: 182 GHAMHGQAEEALELFSKMEEASVEPNAVTFVGLLHACSHI 301
           G+A  G+A EAL+L  +M +A + P  VT    L AC+++
Sbjct: 220 GYAQGGRAMEALDLLREMGKAGLSPKPVTLACALPACANL 259



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 37/97 (38%), Positives = 55/97 (56%)
 Frame = +2

Query: 11  GKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIGGHA 190
           G+ +HA     + H+ N  +   LI+MY  CG L  A+ VFD +  + V SW+A+I G  
Sbjct: 63  GRVLHALLF-FNGHQQNTPLQTNLINMYATCGNLLDAQLVFDRLQSKNVRSWNALIRGFI 121

Query: 191 MHGQAEEALELFSKMEEASVEPNAVTFVGLLHACSHI 301
            HG   EAL L S+M  + +EP+  TF  +L AC+ +
Sbjct: 122 KHGLYREALILHSQMLGSGIEPDNFTFPFVLKACADL 158



 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 38/98 (38%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
 Frame = +2

Query: 11  GKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIGGHA 190
           GK IH  A++     +++ V + L DMY K   +  A +VFD+M +++VVSW+ MI G  
Sbjct: 265 GKEIHGHAIKTKCD-DDLYVASALSDMYAKTHDMTYATKVFDKMPKKSVVSWNGMIAGCN 323

Query: 191 MHGQAEEALELFSKMEEA-SVEPNAVTFVGLLHACSHI 301
            +G + +AL+LF KM      +PN VT V LL +C+ +
Sbjct: 324 QNGFSNKALDLFRKMVVTFPRKPNWVTLVNLLPSCAKL 361


>ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Vitis vinifera]
          Length = 541

 Score =  114 bits (285), Expect = 1e-23
 Identities = 54/99 (54%), Positives = 73/99 (73%)
 Frame = +2

Query: 2   LDLGKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIG 181
           L+LGK IH +A +    +N + VCN LI+MY KCG +   R++FD+M ER V+SWS MI 
Sbjct: 265 LELGKWIHFYADKAGFLRN-ICVCNALIEMYAKCGSIDEGRRLFDQMNERDVISWSTMIV 323

Query: 182 GHAMHGQAEEALELFSKMEEASVEPNAVTFVGLLHACSH 298
           G A HG+A EA+ELF +M++A +EPN +TFVGLL AC+H
Sbjct: 324 GLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAH 362



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 31/130 (23%)
 Frame = +2

Query: 5   DLGKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIGG 184
           DLGK++H    +    K+N  V N+L++MY+KC  L  A +VF+EM ER  VSW+ +I G
Sbjct: 134 DLGKQVHGHVFKFG-QKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWNTLISG 192

Query: 185 HAMHGQAE-------------------------------EALELFSKMEEASVEPNAVTF 271
           H   GQ                                 +ALE F +M+   +EP+ ++ 
Sbjct: 193 HVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISL 252

Query: 272 VGLLHACSHI 301
           V +L AC+ +
Sbjct: 253 VSVLPACAQL 262


>gb|AEP33755.1| chloroplast biogenesis 19, partial [Olimarabidopsis pumila]
          Length = 475

 Score =  113 bits (283), Expect = 2e-23
 Identities = 54/100 (54%), Positives = 72/100 (72%)
 Frame = +2

Query: 2   LDLGKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIG 181
           L LG  +H + M     KNNVRV N+LID+Y +CGC++ AR+VFD+M +RTVVSW+++I 
Sbjct: 197 LSLGLWVHRYVMSQDF-KNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIV 255

Query: 182 GHAMHGQAEEALELFSKMEEASVEPNAVTFVGLLHACSHI 301
           G A +G A E+L  F KM+E   +PNAVTF G L ACSH+
Sbjct: 256 GFAANGNAHESLVYFRKMQEEGFKPNAVTFTGALTACSHV 295



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 32/93 (34%), Positives = 55/93 (59%)
 Frame = +2

Query: 8   LGKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIGGH 187
           LG  +H +A +  L +N+V V   ++ MY K G ++ AR VFD M ++  V+W+ MI G+
Sbjct: 66  LGDLLHGYACKLGLDRNHVMVGTAILGMYSKRGRVKKARLVFDYMDDKNSVTWNTMIDGY 125

Query: 188 AMHGQAEEALELFSKMEEASVEPNAVTFVGLLH 286
              GQ   A++LF KM     EP+ +++  +++
Sbjct: 126 MRSGQVHNAVKLFDKMP----EPDLISWTAMVN 154



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 32/83 (38%), Positives = 54/83 (65%)
 Frame = +2

Query: 53  KNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIGGHAMHGQAEEALELFSK 232
           KN+V   NT+ID Y++ G +  A ++FD+M E  ++SW+AM+ G    G  EEAL  F +
Sbjct: 113 KNSV-TWNTMIDGYMRSGQVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFRE 171

Query: 233 MEEASVEPNAVTFVGLLHACSHI 301
           M+ + V+P+ V  +  L+AC+++
Sbjct: 172 MQISGVKPDYVAIIAALNACTNL 194


>emb|CBI20961.3| unnamed protein product [Vitis vinifera]
          Length = 553

 Score =  113 bits (282), Expect = 3e-23
 Identities = 53/99 (53%), Positives = 73/99 (73%)
 Frame = +2

Query: 2   LDLGKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIG 181
           L+LGK IH +A +    +N + VCN LI+MY KCG +   R++FD+M ER V+SWS MI 
Sbjct: 281 LELGKWIHIYADKAGFLRN-ICVCNALIEMYAKCGSIDQGRRLFDQMKERDVISWSTMIV 339

Query: 182 GHAMHGQAEEALELFSKMEEASVEPNAVTFVGLLHACSH 298
           G A HG+A EA+ELF +M++A +EP+ +TFVGLL AC+H
Sbjct: 340 GLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAH 378



 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 39/101 (38%), Positives = 64/101 (63%), Gaps = 2/101 (1%)
 Frame = +2

Query: 5   DLGKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAER--TVVSWSAMI 178
           DLGK++H    +    K+N  V N+L++MY+KC  L  A +VF+EM ER  T+ SW+A++
Sbjct: 179 DLGKQVHGHVFKFG-QKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDATIFSWTAIV 237

Query: 179 GGHAMHGQAEEALELFSKMEEASVEPNAVTFVGLLHACSHI 301
            G+A  G   +ALE F +M+   +EP+ ++ V +L  C+ +
Sbjct: 238 SGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPDCAQL 278


>ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
           [Vitis vinifera]
          Length = 537

 Score =  113 bits (282), Expect = 3e-23
 Identities = 53/99 (53%), Positives = 73/99 (73%)
 Frame = +2

Query: 2   LDLGKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIG 181
           L+LGK IH +A +    +N + VCN LI+MY KCG +   R++FD+M ER V+SWS MI 
Sbjct: 265 LELGKWIHIYADKAGFLRN-ICVCNALIEMYAKCGSIDQGRRLFDQMKERDVISWSTMIV 323

Query: 182 GHAMHGQAEEALELFSKMEEASVEPNAVTFVGLLHACSH 298
           G A HG+A EA+ELF +M++A +EP+ +TFVGLL AC+H
Sbjct: 324 GLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAH 362



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 33/82 (40%), Positives = 51/82 (62%)
 Frame = +2

Query: 5   DLGKRIHAFAMQCSLHKNNVRVCNTLIDMYIKCGCLQLARQVFDEMAERTVVSWSAMIGG 184
           DLGK++H    +    K+N  V N+L++MY+KC  L  A +VF+EM ER  VSW+ +I G
Sbjct: 134 DLGKQVHGHVFKFG-QKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISG 192

Query: 185 HAMHGQAEEALELFSKMEEASV 250
           H   GQ   A  +F +M++ ++
Sbjct: 193 HVRLGQMRRARAIFEEMQDKTI 214