BLASTX nr result
ID: Zingiber25_contig00042454
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00042454
(483 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006585437.1| PREDICTED: pentatricopeptide repeat-containi... 72 8e-11
ref|XP_002272784.1| PREDICTED: pentatricopeptide repeat-containi... 69 5e-10
emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera] 69 5e-10
ref|XP_002319373.2| hypothetical protein POPTR_0013s14110g [Popu... 69 8e-10
gb|EOX99345.1| Pentatricopeptide repeat (PPR) superfamily protei... 68 1e-09
gb|EPS73099.1| hypothetical protein M569_01654 [Genlisea aurea] 68 1e-09
ref|XP_002517971.1| pentatricopeptide repeat-containing protein,... 68 1e-09
ref|XP_004306009.1| PREDICTED: pentatricopeptide repeat-containi... 67 3e-09
ref|XP_006300678.1| hypothetical protein CARUB_v10019718mg [Caps... 66 4e-09
gb|EMJ18275.1| hypothetical protein PRUPE_ppa000834mg [Prunus pe... 66 4e-09
ref|NP_177512.1| pentatricopeptide repeat-containing protein [Ar... 66 4e-09
gb|EXB62281.1| hypothetical protein L484_022169 [Morus notabilis] 65 7e-09
ref|XP_006390515.1| hypothetical protein EUTSA_v10019624mg, part... 65 9e-09
ref|XP_002887500.1| pentatricopeptide repeat-containing protein ... 65 9e-09
ref|XP_006357522.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
ref|XP_004243803.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
ref|XP_006491629.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
ref|XP_006447317.1| hypothetical protein CICLE_v10017547mg [Citr... 64 2e-08
ref|XP_004169587.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 63 5e-08
ref|XP_004141647.1| PREDICTED: pentatricopeptide repeat-containi... 63 5e-08
>ref|XP_006585437.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Glycine max]
Length = 989
Score = 72.0 bits (175), Expect = 8e-11
Identities = 43/112 (38%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Frame = +1
Query: 169 IPPNRA-------AGAFPSALRFLESNPLDGGXXXXXXXXXXXXXTPKEMTVLXXXXXXX 327
+PPNR GA PS LR L + +PKE+TVL
Sbjct: 56 LPPNRKKKKKKPYGGALPSLLRTLST----AADLETALSTLPSPLSPKEITVLLKEQSTW 111
Query: 328 XXXXXXXXXXXXXXXXXPNPIHYNVVLRTLGRARRWDELRHCWLDMAKDGIL 483
PN IHYNVVLR LG+A++WD+LR CWLDMAK+G+L
Sbjct: 112 QRAARIFEWFKSQTWYTPNAIHYNVVLRALGKAQQWDQLRLCWLDMAKNGVL 163
>ref|XP_002272784.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Vitis vinifera]
Length = 1008
Score = 69.3 bits (168), Expect = 5e-10
Identities = 39/99 (39%), Positives = 48/99 (48%)
Frame = +1
Query: 187 AGAFPSALRFLESNPLDGGXXXXXXXXXXXXXTPKEMTVLXXXXXXXXXXXXXXXXXXXX 366
+G PS LR LES +PKE TV+
Sbjct: 123 SGVLPSILRALESE-----NNIEDTLSSCGKLSPKEQTVILKEQSSWERVLRVFEWIKSQ 177
Query: 367 XXXXPNPIHYNVVLRTLGRARRWDELRHCWLDMAKDGIL 483
PN IHYNVVLR LGRA++WDELR CW++MAK+G+L
Sbjct: 178 EDYVPNVIHYNVVLRVLGRAQKWDELRLCWIEMAKNGVL 216
>emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera]
Length = 1313
Score = 69.3 bits (168), Expect = 5e-10
Identities = 39/99 (39%), Positives = 48/99 (48%)
Frame = +1
Query: 187 AGAFPSALRFLESNPLDGGXXXXXXXXXXXXXTPKEMTVLXXXXXXXXXXXXXXXXXXXX 366
+G PS LR LES +PKE TV+
Sbjct: 428 SGVLPSILRALESEX-----NIEDTLSSCGKLSPKEQTVILKEQSSWERVLRVFEWIKSQ 482
Query: 367 XXXXPNPIHYNVVLRTLGRARRWDELRHCWLDMAKDGIL 483
PN IHYNVVLR LGRA++WDELR CW++MAK+G+L
Sbjct: 483 EDYVPNVIHYNVVLRVLGRAQKWDELRLCWIEMAKNGVL 521
>ref|XP_002319373.2| hypothetical protein POPTR_0013s14110g [Populus trichocarpa]
gi|550325820|gb|EEE95296.2| hypothetical protein
POPTR_0013s14110g [Populus trichocarpa]
Length = 965
Score = 68.6 bits (166), Expect = 8e-10
Identities = 32/67 (47%), Positives = 39/67 (58%)
Frame = +1
Query: 283 TPKEMTVLXXXXXXXXXXXXXXXXXXXXXXXXPNPIHYNVVLRTLGRARRWDELRHCWLD 462
+PKE TV+ PN IHYN+VLR LGRA+RWDELR CW+D
Sbjct: 96 SPKEQTVVLKEQRNWERVVRVFEFFKSQKDYVPNVIHYNIVLRVLGRAKRWDELRLCWMD 155
Query: 463 MAKDGIL 483
MAK+G+L
Sbjct: 156 MAKNGVL 162
>gb|EOX99345.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 1007
Score = 68.2 bits (165), Expect = 1e-09
Identities = 38/106 (35%), Positives = 50/106 (47%)
Frame = +1
Query: 166 SIPPNRAAGAFPSALRFLESNPLDGGXXXXXXXXXXXXXTPKEMTVLXXXXXXXXXXXXX 345
++ R G PS LR LE + +PKE TV+
Sbjct: 99 NVKKKRYKGILPSILRALECDT----DVEKTLSSVCENLSPKEQTVILKEQSNCERVTRV 154
Query: 346 XXXXXXXXXXXPNPIHYNVVLRTLGRARRWDELRHCWLDMAKDGIL 483
PN IHYN+VLR LGRA++WDELR CW++MAK+G+L
Sbjct: 155 FGFFKSLKDYVPNVIHYNIVLRALGRAQKWDELRLCWIEMAKNGVL 200
>gb|EPS73099.1| hypothetical protein M569_01654 [Genlisea aurea]
Length = 1119
Score = 67.8 bits (164), Expect = 1e-09
Identities = 32/67 (47%), Positives = 39/67 (58%)
Frame = +1
Query: 283 TPKEMTVLXXXXXXXXXXXXXXXXXXXXXXXXPNPIHYNVVLRTLGRARRWDELRHCWLD 462
+PKE TV+ PN IHYNVVLR LG+ARRWDELR CW+D
Sbjct: 278 SPKEQTVILKEQRGWEKVLRIFEWFKRQESYTPNVIHYNVVLRALGKARRWDELRLCWID 337
Query: 463 MAKDGIL 483
MA++G+L
Sbjct: 338 MAENGVL 344
>ref|XP_002517971.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542953|gb|EEF44489.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1029
Score = 67.8 bits (164), Expect = 1e-09
Identities = 37/101 (36%), Positives = 46/101 (45%)
Frame = +1
Query: 181 RAAGAFPSALRFLESNPLDGGXXXXXXXXXXXXXTPKEMTVLXXXXXXXXXXXXXXXXXX 360
R G PS LR L S+ PKE TV+
Sbjct: 117 RYGGVLPSILRSLNSD----NDIEKTLNSFGDNLNPKEQTVILKEQRNWERMVRVFEFFK 172
Query: 361 XXXXXXPNPIHYNVVLRTLGRARRWDELRHCWLDMAKDGIL 483
PN IHYN+VLR LGRA++WD+LR CW++MAK G+L
Sbjct: 173 SRKDYVPNVIHYNIVLRALGRAQKWDDLRRCWIEMAKSGVL 213
>ref|XP_004306009.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Fragaria vesca subsp. vesca]
Length = 1000
Score = 66.6 bits (161), Expect = 3e-09
Identities = 39/101 (38%), Positives = 46/101 (45%)
Frame = +1
Query: 181 RAAGAFPSALRFLESNPLDGGXXXXXXXXXXXXXTPKEMTVLXXXXXXXXXXXXXXXXXX 360
R G PS LR LE+ + KE TV+
Sbjct: 95 RYGGVLPSILRSLENE----NDVEKTLESFGESLSAKEQTVILKEQRSWERVLRVFEWFK 150
Query: 361 XXXXXXPNPIHYNVVLRTLGRARRWDELRHCWLDMAKDGIL 483
PN IHYNVVLR LGRA+RWDELR CW++MAK G+L
Sbjct: 151 SQKEYLPNVIHYNVVLRVLGRAQRWDELRLCWIEMAKKGVL 191
>ref|XP_006300678.1| hypothetical protein CARUB_v10019718mg [Capsella rubella]
gi|565486079|ref|XP_006300679.1| hypothetical protein
CARUB_v10019718mg [Capsella rubella]
gi|482569388|gb|EOA33576.1| hypothetical protein
CARUB_v10019718mg [Capsella rubella]
gi|482569389|gb|EOA33577.1| hypothetical protein
CARUB_v10019718mg [Capsella rubella]
Length = 986
Score = 66.2 bits (160), Expect = 4e-09
Identities = 42/126 (33%), Positives = 53/126 (42%), Gaps = 12/126 (9%)
Frame = +1
Query: 142 HCKLVLVQSIPPNRAA------------GAFPSALRFLESNPLDGGXXXXXXXXXXXXXT 285
HC S+ P R + G PS LR L+S+ +
Sbjct: 53 HCAASSPSSVSPPRCSKPNPSSRRRKYGGVIPSILRSLDSST----DIETTLASLCLNLS 108
Query: 286 PKEMTVLXXXXXXXXXXXXXXXXXXXXXXXXPNPIHYNVVLRTLGRARRWDELRHCWLDM 465
PKE TVL PN IHYN+VLR LGRA +WDELR CW++M
Sbjct: 109 PKEQTVLLKEQTRWDRVLRVFRFFQSHQGYVPNVIHYNIVLRALGRAGKWDELRLCWIEM 168
Query: 466 AKDGIL 483
A +G+L
Sbjct: 169 AHNGVL 174
>gb|EMJ18275.1| hypothetical protein PRUPE_ppa000834mg [Prunus persica]
Length = 987
Score = 66.2 bits (160), Expect = 4e-09
Identities = 38/98 (38%), Positives = 45/98 (45%)
Frame = +1
Query: 190 GAFPSALRFLESNPLDGGXXXXXXXXXXXXXTPKEMTVLXXXXXXXXXXXXXXXXXXXXX 369
G PS LR L+S PKE TV+
Sbjct: 122 GVLPSILRSLQSE----NDVEKTLNSCGENLNPKEQTVILKEQKRWERVVRVFEWFKSQK 177
Query: 370 XXXPNPIHYNVVLRTLGRARRWDELRHCWLDMAKDGIL 483
PN IHYNVVLR LGRA++WDELR CW++MAK G+L
Sbjct: 178 EYVPNVIHYNVVLRKLGRAQKWDELRLCWIEMAKRGVL 215
>ref|NP_177512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169780|sp|Q9C9U0.1|PP118_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g73710 gi|12324197|gb|AAG52063.1|AC012679_1
hypothetical protein; 49134-52109 [Arabidopsis thaliana]
gi|332197379|gb|AEE35500.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 991
Score = 66.2 bits (160), Expect = 4e-09
Identities = 42/126 (33%), Positives = 53/126 (42%), Gaps = 12/126 (9%)
Frame = +1
Query: 142 HCKLVLVQSIPPNRAA------------GAFPSALRFLESNPLDGGXXXXXXXXXXXXXT 285
HC S+ P R + G PS LR L+S+ +
Sbjct: 56 HCAASSSSSVSPPRCSKPNPSSRKRKYGGVIPSILRSLDSST----DIETTLASLCLNLS 111
Query: 286 PKEMTVLXXXXXXXXXXXXXXXXXXXXXXXXPNPIHYNVVLRTLGRARRWDELRHCWLDM 465
PKE TVL PN IHYN+VLR LGRA +WDELR CW++M
Sbjct: 112 PKEQTVLLKEQTRWERVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEM 171
Query: 466 AKDGIL 483
A +G+L
Sbjct: 172 AHNGVL 177
>gb|EXB62281.1| hypothetical protein L484_022169 [Morus notabilis]
Length = 1018
Score = 65.5 bits (158), Expect = 7e-09
Identities = 39/100 (39%), Positives = 46/100 (46%)
Frame = +1
Query: 181 RAAGAFPSALRFLESNPLDGGXXXXXXXXXXXXXTPKEMTVLXXXXXXXXXXXXXXXXXX 360
R G PS LR LESN +PKE TV+
Sbjct: 117 RYGGVLPSILRSLESND----DVEKILVEFGANLSPKEQTVILKEQRNWERVVRVFEWFK 172
Query: 361 XXXXXXPNPIHYNVVLRTLGRARRWDELRHCWLDMAKDGI 480
PN IHYNVVLR LGRA++WDELR W++MAK G+
Sbjct: 173 SQKEYVPNVIHYNVVLRALGRAQKWDELRLQWIEMAKTGV 212
>ref|XP_006390515.1| hypothetical protein EUTSA_v10019624mg, partial [Eutrema
salsugineum] gi|557086949|gb|ESQ27801.1| hypothetical
protein EUTSA_v10019624mg, partial [Eutrema salsugineum]
Length = 967
Score = 65.1 bits (157), Expect = 9e-09
Identities = 37/98 (37%), Positives = 46/98 (46%)
Frame = +1
Query: 190 GAFPSALRFLESNPLDGGXXXXXXXXXXXXXTPKEMTVLXXXXXXXXXXXXXXXXXXXXX 369
G PS LR L+S+ +PKE TVL
Sbjct: 75 GVLPSILRSLDSST----DIETTLASLCLNLSPKEQTVLLKEQTRWDRVLRVFRFFQSHQ 130
Query: 370 XXXPNPIHYNVVLRTLGRARRWDELRHCWLDMAKDGIL 483
PN IHYN+VLR LGRA +WDELR CW++MA +G+L
Sbjct: 131 GYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVL 168
>ref|XP_002887500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297333341|gb|EFH63759.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 989
Score = 65.1 bits (157), Expect = 9e-09
Identities = 37/98 (37%), Positives = 46/98 (46%)
Frame = +1
Query: 190 GAFPSALRFLESNPLDGGXXXXXXXXXXXXXTPKEMTVLXXXXXXXXXXXXXXXXXXXXX 369
G PS LR L+S+ +PKE TVL
Sbjct: 78 GVIPSILRSLDSST----DIETTLASLCLNLSPKEQTVLLKEQTRWDRVLRVFRFFQSHQ 133
Query: 370 XXXPNPIHYNVVLRTLGRARRWDELRHCWLDMAKDGIL 483
PN IHYN+VLR LGRA +WDELR CW++MA +G+L
Sbjct: 134 SYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVL 171
>ref|XP_006357522.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like isoform X1 [Solanum tuberosum]
gi|565382385|ref|XP_006357523.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g73710-like isoform X2 [Solanum tuberosum]
Length = 1012
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/66 (43%), Positives = 38/66 (57%)
Frame = +1
Query: 283 TPKEMTVLXXXXXXXXXXXXXXXXXXXXXXXXPNPIHYNVVLRTLGRARRWDELRHCWLD 462
+PKE TV+ PN IHYNV+LR LGRA++WDELR CW++
Sbjct: 144 SPKEQTVILKEQSNWGKALRVFEWMKSQKDYVPNVIHYNVILRALGRAKKWDELRLCWIE 203
Query: 463 MAKDGI 480
MAK+G+
Sbjct: 204 MAKNGV 209
>ref|XP_004243803.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Solanum lycopersicum]
Length = 1014
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/66 (43%), Positives = 38/66 (57%)
Frame = +1
Query: 283 TPKEMTVLXXXXXXXXXXXXXXXXXXXXXXXXPNPIHYNVVLRTLGRARRWDELRHCWLD 462
+PKE TV+ PN IHYNV+LR LGRA++WDELR CW++
Sbjct: 144 SPKEQTVILKEQSNWEKALRVFEWMKSQKDYVPNVIHYNVILRALGRAKKWDELRLCWIE 203
Query: 463 MAKDGI 480
MAK+G+
Sbjct: 204 MAKNGV 209
>ref|XP_006491629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Citrus sinensis]
Length = 1004
Score = 63.9 bits (154), Expect = 2e-08
Identities = 37/98 (37%), Positives = 46/98 (46%)
Frame = +1
Query: 190 GAFPSALRFLESNPLDGGXXXXXXXXXXXXXTPKEMTVLXXXXXXXXXXXXXXXXXXXXX 369
G PS LR ESN +PKE TV+
Sbjct: 108 GILPSLLRSFESND----DIDNTLNSFCENLSPKEQTVVLKEQKSWERVIRVFEFFKSQK 163
Query: 370 XXXPNPIHYNVVLRTLGRARRWDELRHCWLDMAKDGIL 483
PN IHYN+VLR LGRA++WDELR W++MAK+G+L
Sbjct: 164 DYVPNVIHYNIVLRALGRAQKWDELRLRWIEMAKNGVL 201
>ref|XP_006447317.1| hypothetical protein CICLE_v10017547mg [Citrus clementina]
gi|557549928|gb|ESR60557.1| hypothetical protein
CICLE_v10017547mg [Citrus clementina]
Length = 962
Score = 63.9 bits (154), Expect = 2e-08
Identities = 37/98 (37%), Positives = 46/98 (46%)
Frame = +1
Query: 190 GAFPSALRFLESNPLDGGXXXXXXXXXXXXXTPKEMTVLXXXXXXXXXXXXXXXXXXXXX 369
G PS LR ESN +PKE TV+
Sbjct: 108 GILPSLLRSFESND----DIDNTLNSFCENLSPKEQTVVLKEQKSWERVIRVFEFFKSQK 163
Query: 370 XXXPNPIHYNVVLRTLGRARRWDELRHCWLDMAKDGIL 483
PN IHYN+VLR LGRA++WDELR W++MAK+G+L
Sbjct: 164 DYVPNVIHYNIVLRALGRAQKWDELRLRWIEMAKNGVL 201
>ref|XP_004169587.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g73710-like [Cucumis sativus]
Length = 1026
Score = 62.8 bits (151), Expect = 5e-08
Identities = 36/98 (36%), Positives = 48/98 (48%)
Frame = +1
Query: 190 GAFPSALRFLESNPLDGGXXXXXXXXXXXXXTPKEMTVLXXXXXXXXXXXXXXXXXXXXX 369
G PS LR L+S G +PKE TV+
Sbjct: 100 GILPSILRSLKSASDIGSILSSSCQNL----SPKEQTVILKEQSRWERVIQVFQWFKSQK 155
Query: 370 XXXPNPIHYNVVLRTLGRARRWDELRHCWLDMAKDGIL 483
PN IHYN+VLRTLG+A++WDELR CW +MA++G++
Sbjct: 156 DYVPNVIHYNIVLRTLGQAQKWDELRLCWNEMAENGVV 193
>ref|XP_004141647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Cucumis sativus]
Length = 1020
Score = 62.8 bits (151), Expect = 5e-08
Identities = 36/98 (36%), Positives = 48/98 (48%)
Frame = +1
Query: 190 GAFPSALRFLESNPLDGGXXXXXXXXXXXXXTPKEMTVLXXXXXXXXXXXXXXXXXXXXX 369
G PS LR L+S G +PKE TV+
Sbjct: 100 GILPSILRSLKSASDIGNILSSSCQNL----SPKEQTVILKEQSRWERVIQVFQWFKSQK 155
Query: 370 XXXPNPIHYNVVLRTLGRARRWDELRHCWLDMAKDGIL 483
PN IHYN+VLRTLG+A++WDELR CW +MA++G++
Sbjct: 156 DYVPNVIHYNIVLRTLGQAQKWDELRLCWNEMAENGVV 193