BLASTX nr result
ID: Zingiber25_contig00042439
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00042439
(380 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI37517.3| unnamed protein product [Vitis vinifera] 67 3e-09
ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ... 67 3e-09
ref|XP_006649448.1| PREDICTED: DNA topoisomerase 3-alpha-like [O... 66 6e-09
gb|EEC84165.1| hypothetical protein OsI_30540 [Oryza sativa Indi... 66 6e-09
ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [C... 65 1e-08
gb|EMJ15489.1| hypothetical protein PRUPE_ppb010436mg [Prunus pe... 65 1e-08
ref|XP_003558748.1| PREDICTED: DNA topoisomerase 3-alpha [Brachy... 64 2e-08
ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Popu... 64 2e-08
ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [S... 64 3e-08
gb|EPS73635.1| hypothetical protein M569_01118, partial [Genlise... 63 5e-08
ref|NP_001173278.1| Os03g0165000 [Oryza sativa Japonica Group] g... 63 5e-08
gb|EEE58379.1| hypothetical protein OsJ_09535 [Oryza sativa Japo... 63 5e-08
gb|EEC74578.1| hypothetical protein OsI_10148 [Oryza sativa Indi... 63 5e-08
gb|ESW09773.1| hypothetical protein PHAVU_009G154900g, partial [... 62 6e-08
ref|XP_004171180.1| PREDICTED: DNA topoisomerase 3-alpha-like, p... 62 6e-08
ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [C... 62 6e-08
ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [C... 62 8e-08
gb|EOX92637.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao] 62 8e-08
ref|NP_201197.1| topoisomerase 3alpha [Arabidopsis thaliana] gi|... 61 1e-07
ref|XP_006279975.1| hypothetical protein CARUB_v10025845mg [Caps... 61 1e-07
>emb|CBI37517.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 66.6 bits (161), Expect = 3e-09
Identities = 29/36 (80%), Positives = 32/36 (88%), Gaps = 1/36 (2%)
Frame = +1
Query: 97 TSSSTFVSATGEPISGS-CFVCGDPSHFANACPNRG 201
TS +TFVSATG+P+SG CFVCGDPSHFAN CPNRG
Sbjct: 553 TSDTTFVSATGDPVSGRRCFVCGDPSHFANVCPNRG 588
>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
Length = 914
Score = 66.6 bits (161), Expect = 3e-09
Identities = 29/36 (80%), Positives = 32/36 (88%), Gaps = 1/36 (2%)
Frame = +1
Query: 97 TSSSTFVSATGEPISGS-CFVCGDPSHFANACPNRG 201
TS +TFVSATG+P+SG CFVCGDPSHFAN CPNRG
Sbjct: 878 TSDTTFVSATGDPVSGRRCFVCGDPSHFANVCPNRG 913
>ref|XP_006649448.1| PREDICTED: DNA topoisomerase 3-alpha-like [Oryza brachyantha]
Length = 923
Score = 65.9 bits (159), Expect = 6e-09
Identities = 26/31 (83%), Positives = 30/31 (96%)
Frame = +1
Query: 112 FVSATGEPISGSCFVCGDPSHFANACPNRGR 204
FV+ATGEP+ GSCFVCGDP+HFANACP+RGR
Sbjct: 893 FVAATGEPVHGSCFVCGDPTHFANACPSRGR 923
>gb|EEC84165.1| hypothetical protein OsI_30540 [Oryza sativa Indica Group]
Length = 897
Score = 65.9 bits (159), Expect = 6e-09
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = +1
Query: 112 FVSATGEPISGSCFVCGDPSHFANACPNRGR 204
FV+ATGEP+ GSCF+CGDP+HFAN CPNRGR
Sbjct: 867 FVAATGEPVHGSCFICGDPTHFANVCPNRGR 897
>ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cicer arietinum]
Length = 920
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/36 (80%), Positives = 32/36 (88%), Gaps = 1/36 (2%)
Frame = +1
Query: 97 TSSSTFVSATGEPISGS-CFVCGDPSHFANACPNRG 201
+S+ TFVSATG+PISG CFVCGDPSHFAN CPNRG
Sbjct: 884 SSNVTFVSATGDPISGRRCFVCGDPSHFANVCPNRG 919
>gb|EMJ15489.1| hypothetical protein PRUPE_ppb010436mg [Prunus persica]
Length = 166
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/32 (90%), Positives = 30/32 (93%), Gaps = 1/32 (3%)
Frame = +1
Query: 109 TFVSATGEPISGS-CFVCGDPSHFANACPNRG 201
TFVSATG+PISG CFVCGDPSHFANACPNRG
Sbjct: 134 TFVSATGDPISGRRCFVCGDPSHFANACPNRG 165
>ref|XP_003558748.1| PREDICTED: DNA topoisomerase 3-alpha [Brachypodium distachyon]
Length = 924
Score = 64.3 bits (155), Expect = 2e-08
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +1
Query: 109 TFVSATGEPISGSCFVCGDPSHFANACPNRGR 204
TFVSATG+ + G CF CGDPSHFANACPNRGR
Sbjct: 893 TFVSATGDTVHGCCFACGDPSHFANACPNRGR 924
>ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Populus trichocarpa]
gi|222856496|gb|EEE94043.1| hypothetical protein
POPTR_0005s06810g [Populus trichocarpa]
Length = 910
Score = 63.9 bits (154), Expect = 2e-08
Identities = 29/32 (90%), Positives = 30/32 (93%), Gaps = 1/32 (3%)
Frame = +1
Query: 109 TFVSATGEPISGS-CFVCGDPSHFANACPNRG 201
TFVSATGEPISG CFVCGDPSHFANACP+RG
Sbjct: 878 TFVSATGEPISGRRCFVCGDPSHFANACPSRG 909
>ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum tuberosum]
Length = 915
Score = 63.5 bits (153), Expect = 3e-08
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +1
Query: 97 TSSSTFVSATGEPISGSCFVCGDPSHFANACPNRG 201
+S+ +FVSATGEPI+G CF+CGDP HFAN CP RG
Sbjct: 881 SSNVSFVSATGEPITGRCFICGDPGHFANVCPRRG 915
>gb|EPS73635.1| hypothetical protein M569_01118, partial [Genlisea aurea]
Length = 813
Score = 62.8 bits (151), Expect = 5e-08
Identities = 24/33 (72%), Positives = 31/33 (93%)
Frame = +1
Query: 100 SSSTFVSATGEPISGSCFVCGDPSHFANACPNR 198
++++FVSATGEP+SG CF+CG+PSHFAN CPNR
Sbjct: 781 ATTSFVSATGEPVSGRCFLCGEPSHFANECPNR 813
>ref|NP_001173278.1| Os03g0165000 [Oryza sativa Japonica Group]
gi|255674230|dbj|BAH92006.1| Os03g0165000 [Oryza sativa
Japonica Group]
Length = 928
Score = 62.8 bits (151), Expect = 5e-08
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +1
Query: 112 FVSATGEPISGSCFVCGDPSHFANACPNRGR 204
FV+ATGEP+ GSCF+CGDP+HFAN CPN GR
Sbjct: 898 FVAATGEPVYGSCFICGDPTHFANVCPNLGR 928
>gb|EEE58379.1| hypothetical protein OsJ_09535 [Oryza sativa Japonica Group]
Length = 983
Score = 62.8 bits (151), Expect = 5e-08
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +1
Query: 112 FVSATGEPISGSCFVCGDPSHFANACPNRGR 204
FV+ATGEP+ GSCF+CGDP+HFAN CPN GR
Sbjct: 953 FVAATGEPVYGSCFICGDPTHFANVCPNLGR 983
>gb|EEC74578.1| hypothetical protein OsI_10148 [Oryza sativa Indica Group]
Length = 981
Score = 62.8 bits (151), Expect = 5e-08
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +1
Query: 112 FVSATGEPISGSCFVCGDPSHFANACPNRGR 204
FV+ATGEP+ GSCF+CGDP+HFAN CPN GR
Sbjct: 951 FVAATGEPVYGSCFICGDPTHFANVCPNLGR 981
>gb|ESW09773.1| hypothetical protein PHAVU_009G154900g, partial [Phaseolus
vulgaris] gi|561010867|gb|ESW09774.1| hypothetical
protein PHAVU_009G154900g, partial [Phaseolus vulgaris]
Length = 281
Score = 62.4 bits (150), Expect = 6e-08
Identities = 27/36 (75%), Positives = 32/36 (88%), Gaps = 1/36 (2%)
Frame = +1
Query: 97 TSSSTFVSATGEPISGS-CFVCGDPSHFANACPNRG 201
T+++TFVSATG+PISG C+ CGDPSHFAN CPNRG
Sbjct: 245 TAATTFVSATGDPISGRRCYRCGDPSHFANVCPNRG 280
>ref|XP_004171180.1| PREDICTED: DNA topoisomerase 3-alpha-like, partial [Cucumis
sativus]
Length = 257
Score = 62.4 bits (150), Expect = 6e-08
Identities = 28/34 (82%), Positives = 30/34 (88%), Gaps = 1/34 (2%)
Frame = +1
Query: 103 SSTFVSATGEPISGS-CFVCGDPSHFANACPNRG 201
++TFVSATGEPIS CFVCGDPSHFAN CPNRG
Sbjct: 223 AATFVSATGEPISDRRCFVCGDPSHFANVCPNRG 256
>ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cucumis sativus]
Length = 925
Score = 62.4 bits (150), Expect = 6e-08
Identities = 28/34 (82%), Positives = 30/34 (88%), Gaps = 1/34 (2%)
Frame = +1
Query: 103 SSTFVSATGEPISGS-CFVCGDPSHFANACPNRG 201
++TFVSATGEPIS CFVCGDPSHFAN CPNRG
Sbjct: 891 AATFVSATGEPISDRRCFVCGDPSHFANVCPNRG 924
>ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [Citrus sinensis]
Length = 940
Score = 62.0 bits (149), Expect = 8e-08
Identities = 27/32 (84%), Positives = 30/32 (93%), Gaps = 1/32 (3%)
Frame = +1
Query: 109 TFVSATGEPISGS-CFVCGDPSHFANACPNRG 201
TFVSATG+PISG C+VCG+PSHFANACPNRG
Sbjct: 908 TFVSATGDPISGRRCYVCGEPSHFANACPNRG 939
>gb|EOX92637.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao]
Length = 914
Score = 62.0 bits (149), Expect = 8e-08
Identities = 27/32 (84%), Positives = 29/32 (90%), Gaps = 1/32 (3%)
Frame = +1
Query: 109 TFVSATGEPISGS-CFVCGDPSHFANACPNRG 201
TFVSATG+PISG C+VCGDPSHFAN CPNRG
Sbjct: 882 TFVSATGDPISGRRCYVCGDPSHFANVCPNRG 913
>ref|NP_201197.1| topoisomerase 3alpha [Arabidopsis thaliana]
gi|8777305|dbj|BAA96895.1| DNA topoisomerase III
[Arabidopsis thaliana] gi|169218912|gb|ACA50279.1|
topoisomerase 3 alpha [Arabidopsis thaliana]
gi|332010433|gb|AED97816.1| topoisomerase 3alpha
[Arabidopsis thaliana]
Length = 926
Score = 61.2 bits (147), Expect = 1e-07
Identities = 27/34 (79%), Positives = 30/34 (88%), Gaps = 1/34 (2%)
Frame = +1
Query: 100 SSSTFVSATGEPISG-SCFVCGDPSHFANACPNR 198
S ++FVSATGEP+SG CF CGDPSHFANACPNR
Sbjct: 885 SGTSFVSATGEPVSGIRCFSCGDPSHFANACPNR 918
>ref|XP_006279975.1| hypothetical protein CARUB_v10025845mg [Capsella rubella]
gi|482548679|gb|EOA12873.1| hypothetical protein
CARUB_v10025845mg [Capsella rubella]
Length = 919
Score = 61.2 bits (147), Expect = 1e-07
Identities = 27/34 (79%), Positives = 30/34 (88%), Gaps = 1/34 (2%)
Frame = +1
Query: 100 SSSTFVSATGEPISG-SCFVCGDPSHFANACPNR 198
S ++FVSATGEP+SG CF CGDPSHFANACPNR
Sbjct: 884 SGTSFVSATGEPVSGIRCFSCGDPSHFANACPNR 917