BLASTX nr result
ID: Zingiber25_contig00042385
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00042385
(571 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001042380.2| Os01g0212700 [Oryza sativa Japonica Group] g... 62 1e-07
gb|EEE54105.1| hypothetical protein OsJ_00860 [Oryza sativa Japo... 62 1e-07
gb|EAY73003.1| hypothetical protein OsI_00875 [Oryza sativa Indi... 61 2e-07
gb|EMS54362.1| RING-H2 finger protein ATL80 [Triticum urartu] 59 9e-07
ref|XP_003570278.1| PREDICTED: putative RING-H2 finger protein A... 59 1e-06
ref|XP_004968613.1| PREDICTED: RING-H2 finger protein ATL2-like ... 58 1e-06
dbj|BAK05436.1| predicted protein [Hordeum vulgare subsp. vulgare] 58 1e-06
ref|XP_004954584.1| PREDICTED: E3 ubiquitin-protein ligase EL5-l... 58 2e-06
gb|EMT28531.1| RING-H2 finger protein ATL1B [Aegilops tauschii] 57 3e-06
ref|XP_002451622.1| hypothetical protein SORBIDRAFT_04g004780 [S... 57 3e-06
gb|EMT23998.1| RING-H2 finger protein ATL2G [Aegilops tauschii] 57 3e-06
dbj|BAD73152.1| hypothetical protein [Oryza sativa Japonica Group] 57 3e-06
gb|AFW71093.1| putative RING zinc finger domain superfamily prot... 57 3e-06
dbj|BAK05770.1| predicted protein [Hordeum vulgare subsp. vulgare] 57 3e-06
gb|EAZ31565.1| hypothetical protein OsJ_15708 [Oryza sativa Japo... 57 3e-06
ref|XP_004969995.1| PREDICTED: E3 ubiquitin-protein ligase ATL41... 57 4e-06
ref|XP_004954575.1| PREDICTED: uncharacterized protein LOC101785... 57 4e-06
gb|EMT28533.1| RING-H2 finger protein ATL2A [Aegilops tauschii] 57 4e-06
dbj|BAK02775.1| predicted protein [Hordeum vulgare subsp. vulgare] 57 4e-06
ref|XP_002454684.1| hypothetical protein SORBIDRAFT_04g035570 [S... 57 4e-06
>ref|NP_001042380.2| Os01g0212700 [Oryza sativa Japonica Group]
gi|56201670|dbj|BAD73148.1| ring-H2 zinc finger
protein-like [Oryza sativa Japonica Group]
gi|215766139|dbj|BAG98367.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|255672992|dbj|BAF04294.2| Os01g0212700 [Oryza sativa
Japonica Group]
Length = 185
Score = 62.0 bits (149), Expect = 1e-07
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +1
Query: 274 FLVHNSGVAIFGFCMFLCLLYALLFRSCVRHRRSASTGEVDDLA--LREAGLSQPTIDAL 447
F+ + + I F ++L + Y R R R + D A G+S I AL
Sbjct: 23 FMGLSFSIGILSFLVYLAIWYTCTRRRRSRQLRGGGSASADQEAPEANSHGMSAAAIAAL 82
Query: 448 PSFVYRGRGESKDGAASATVDCAVCLGQVAEGEMVRQLPTC 570
P+F Y AA+A +DCAVCLGQV GE VRQLP C
Sbjct: 83 PTFGYEA-----SAAAAAALDCAVCLGQVDAGEKVRQLPKC 118
>gb|EEE54105.1| hypothetical protein OsJ_00860 [Oryza sativa Japonica Group]
Length = 211
Score = 62.0 bits (149), Expect = 1e-07
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +1
Query: 274 FLVHNSGVAIFGFCMFLCLLYALLFRSCVRHRRSASTGEVDDLA--LREAGLSQPTIDAL 447
F+ + + I F ++L + Y R R R + D A G+S I AL
Sbjct: 23 FMGLSFSIGILSFLVYLAIWYTCTRRRRSRQLRGGGSASADQEAPEANSHGMSAAAIAAL 82
Query: 448 PSFVYRGRGESKDGAASATVDCAVCLGQVAEGEMVRQLPTC 570
P+F Y AA+A +DCAVCLGQV GE VRQLP C
Sbjct: 83 PTFGYEA-----SAAAAAALDCAVCLGQVDAGEKVRQLPKC 118
>gb|EAY73003.1| hypothetical protein OsI_00875 [Oryza sativa Indica Group]
Length = 184
Score = 61.2 bits (147), Expect = 2e-07
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +1
Query: 274 FLVHNSGVAIFGFCMFLCLLYALLFRSCVRHRRSASTGEVDDLA--LREAGLSQPTIDAL 447
F+ + + I F ++L + Y R R R + D A G+S I AL
Sbjct: 23 FMGLSFSIGIVSFLVYLAIWYTCTRRRRSRQLRGGGSASADQEAPEANSHGMSAAAIAAL 82
Query: 448 PSFVYRGRGESKDGAASATVDCAVCLGQVAEGEMVRQLPTC 570
P+F Y AA+A +DCAVCLGQV GE VRQLP C
Sbjct: 83 PTFGYEA------SAAAAALDCAVCLGQVDAGEKVRQLPKC 117
>gb|EMS54362.1| RING-H2 finger protein ATL80 [Triticum urartu]
Length = 208
Score = 58.9 bits (141), Expect = 9e-07
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +1
Query: 313 CMFLCLL-YALLFRSCVRHRRSASTGEVDDLALREAGLSQPTIDALPSFVYRGRGESKDG 489
C +C+L AL+ R R RRSAS+ DD GL + I ALP+ + G S
Sbjct: 56 CALVCVLGLALISRCTCRRRRSASS--FDDAPPPPKGLKKKVIHALPTVSFVANGPSPTP 113
Query: 490 AASATVDCAVCLGQVAEGEMVRQLPTC 570
A ++ +CA+CL + EGE +R LP C
Sbjct: 114 ATGSSSECAICLAEYMEGEALRVLPRC 140
>ref|XP_003570278.1| PREDICTED: putative RING-H2 finger protein ATL49-like [Brachypodium
distachyon]
Length = 453
Score = 58.5 bits (140), Expect = 1e-06
Identities = 41/112 (36%), Positives = 55/112 (49%), Gaps = 20/112 (17%)
Frame = +1
Query: 295 VAIFGFCMFLCLLYALLFRSCVR-HRR---------------SASTGEVDDLA-LREAGL 423
VA+ F+C L LL R +R HRR +A G++ L L +AG+
Sbjct: 34 VAVLAVVFFVCGLLHLLVRHLLRRHRRRRRAAEQLADGGESATAFQGQLQQLFHLHDAGV 93
Query: 424 SQPTIDALPSFVYR---GRGESKDGAASATVDCAVCLGQVAEGEMVRQLPTC 570
Q IDALP F+Y+ G G DG DCAVCL + A + +R LP+C
Sbjct: 94 DQAFIDALPVFLYKNVVGGGADGDGGGKEAFDCAVCLCEFAAEDELRLLPSC 145
>ref|XP_004968613.1| PREDICTED: RING-H2 finger protein ATL2-like [Setaria italica]
Length = 175
Score = 58.2 bits (139), Expect = 1e-06
Identities = 43/103 (41%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Frame = +1
Query: 274 FLVHNSGVAIFGFCMFLCLLYALLFRSCVRHRRSASTGEVDDL-ALREAG---LSQPTID 441
F+ + + I F ++L L YA S R R+ G V AL E G +S I
Sbjct: 23 FMGLSFAIGILTFLLYLALWYAC--SSSRRRRQQQRRGVVGVAGALDEGGDRGMSADAIA 80
Query: 442 ALPSFVYRGRGESKDGAASATVDCAVCLGQVAEGEMVRQLPTC 570
ALP+FV+ G S + AA A +DC VCLGQV GE VR+LP C
Sbjct: 81 ALPAFVFARDGGSGEPAAPA-LDCPVCLGQVEAGEKVRRLPKC 122
>dbj|BAK05436.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 172
Score = 58.2 bits (139), Expect = 1e-06
Identities = 38/94 (40%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Frame = +1
Query: 304 FGFCMFLCLLYALLFRSCVRHRRSASTGEVDDL-----ALREAGLSQPTIDALPSFVYRG 468
F + LLY ++ +C R R DDL A E G+S I ALP+F+Y
Sbjct: 28 FAIGILTFLLYLAIWYTCSRRSRRQRGPVADDLESGAAAGTERGMSDAAIAALPTFLYE- 86
Query: 469 RGESKDGAASATVDCAVCLGQVAEGEMVRQLPTC 570
+ D AA VDCAVCLGQ+ GE R+LP C
Sbjct: 87 --QPDDDAA---VDCAVCLGQLEAGEKARRLPKC 115
>ref|XP_004954584.1| PREDICTED: E3 ubiquitin-protein ligase EL5-like [Setaria italica]
Length = 180
Score = 57.8 bits (138), Expect = 2e-06
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 21/109 (19%)
Frame = +1
Query: 307 GFCMFLCLLYALLFRSCVRHRRSASTGEVDDLALRE----------AGLSQPTIDALPSF 456
GFC + ++ C+ RR + G V +A R GLS + ALPSF
Sbjct: 31 GFCATAVSILIIVLCECLCCRRRRAGGTVVYVAARPFFLHGDGDGGGGLSPSAVAALPSF 90
Query: 457 VYR----------GRGE-SKDGAASATVDCAVCLGQVAEGEMVRQLPTC 570
V+R GRGE S G+ CAVCL V EGE+VR+LP C
Sbjct: 91 VFRRGLAAVSSGAGRGEGSGSGSGRGWAQCAVCLSLVQEGEVVRRLPAC 139
>gb|EMT28531.1| RING-H2 finger protein ATL1B [Aegilops tauschii]
Length = 162
Score = 57.4 bits (137), Expect = 3e-06
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +1
Query: 313 CMFLCLL-YALLFRSCVRHRRSASTGEVDDLALREAGLSQPTIDALPSFVYRGRGESKDG 489
C +C+L AL+ R R RRSAS+ D GL + I ALP+ + G S
Sbjct: 10 CALVCVLGLALISRCTCRRRRSASS--FDHAPPPPKGLKKKVIHALPTVSFVANGPSPTP 67
Query: 490 AASATVDCAVCLGQVAEGEMVRQLPTC 570
A ++++CA+CL + EGE +R LP C
Sbjct: 68 ATCSSLECAICLAEYTEGEALRVLPRC 94
>ref|XP_002451622.1| hypothetical protein SORBIDRAFT_04g004780 [Sorghum bicolor]
gi|241931453|gb|EES04598.1| hypothetical protein
SORBIDRAFT_04g004780 [Sorghum bicolor]
Length = 255
Score = 57.4 bits (137), Expect = 3e-06
Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 18/102 (17%)
Frame = +1
Query: 319 FLCLLYALLFRSCVRH---RRSASTGEVDDLALREA---------------GLSQPTIDA 444
F LL LL +R RRSAS DD A ++A GL I A
Sbjct: 83 FGSLLVILLILCAIRWYLVRRSASR---DDAAAQQATAAAAAEPAEKKQPKGLDADAIAA 139
Query: 445 LPSFVYRGRGESKDGAASATVDCAVCLGQVAEGEMVRQLPTC 570
LP F+YR + ++ DG ++CAVCLG +A+G+ R+LP+C
Sbjct: 140 LPEFMYRRKEDAADGKEERELECAVCLGAMADGDAARRLPSC 181
>gb|EMT23998.1| RING-H2 finger protein ATL2G [Aegilops tauschii]
Length = 239
Score = 57.0 bits (136), Expect = 3e-06
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Frame = +1
Query: 298 AIFGFCMFLCLLYALLFRSCVRHRRSASTGEVDDLA-----LREAGLSQPTIDALPSFVY 462
++ + LC++ L R ++ +T V D A R AGL I ALP FVY
Sbjct: 76 SLLAILLILCVIRWYLVHRSARQQQEEATAAVTDAAPGMAKKRSAGLDADAIAALPEFVY 135
Query: 463 RGRGESKDGAASATVDCAVCLGQVAEGEMVRQLPTC 570
R G + +CAVCL + +GE R+LP C
Sbjct: 136 RKDGGVGEEEEEDAAECAVCLAVMVDGEAARRLPRC 171
>dbj|BAD73152.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 233
Score = 57.0 bits (136), Expect = 3e-06
Identities = 39/98 (39%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Frame = +1
Query: 298 AIFGFCMFLCLLYALLFRSCVRHRRSASTGEVDDLALREA----GLSQPTIDALPSFVY- 462
A F FL ++ L V RR ++ R GL I LPSF Y
Sbjct: 39 ASFALSFFLITIFICLRALRVARRRRDRPLVMEQEQRRPTPPRFGLDAAAIARLPSFPYV 98
Query: 463 --RGRGESKDGAASATVDCAVCLGQVAEGEMVRQLPTC 570
R GE D A+S++V+CAVCL V EGE VRQLP C
Sbjct: 99 RARDDGEVSDSASSSSVECAVCLSAVDEGETVRQLPAC 136
>gb|AFW71093.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 182
Score = 57.0 bits (136), Expect = 3e-06
Identities = 42/111 (37%), Positives = 50/111 (45%), Gaps = 23/111 (20%)
Frame = +1
Query: 307 GFCMFLC--LLYALLFRSCVRHRRSASTGEVDDLALR-----------EAGLSQPTIDAL 447
GFC L+ L C R RR G V +A R + GLS + L
Sbjct: 31 GFCATAVSVLIIVLCECLCCRRRRRGPGGTVVYVAARPFFLPSTTDDGDGGLSPSAVSTL 90
Query: 448 PSFVYR---------GRGE-SKDGAASATVDCAVCLGQVAEGEMVRQLPTC 570
PSFV+R GRGE S G+ CAVCL V EGE+VR+LP C
Sbjct: 91 PSFVFRRGLPVGGGSGRGEGSGSGSGRGWAQCAVCLSLVQEGEVVRRLPAC 141
>dbj|BAK05770.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 430
Score = 57.0 bits (136), Expect = 3e-06
Identities = 47/128 (36%), Positives = 58/128 (45%), Gaps = 18/128 (14%)
Frame = +1
Query: 241 LFVVCIFAMSSFLVHNSGVAIFGFCMFLCLLYALLFRSCVRHRRSASTGEVDDLA----- 405
L +V I AM F IFG + L + L R RHR + G+VD +
Sbjct: 33 LLIVAILAMVFF--------IFGL-LNLLVQNILRLRRARRHRLRVAAGDVDGSSPTALQ 83
Query: 406 --------LREAGLSQPTIDALPSFVYR-----GRGESKDGAASATVDCAVCLGQVAEGE 546
L +AG+ Q IDALP FVYR G G K G DCAVCL + A +
Sbjct: 84 GQLQQLFHLHDAGVDQAFIDALPVFVYRAILGAGAGHRKGGGDP--FDCAVCLCEFAMDD 141
Query: 547 MVRQLPTC 570
+R LPTC
Sbjct: 142 ALRLLPTC 149
>gb|EAZ31565.1| hypothetical protein OsJ_15708 [Oryza sativa Japonica Group]
Length = 195
Score = 57.0 bits (136), Expect = 3e-06
Identities = 39/98 (39%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Frame = +1
Query: 298 AIFGFCMFLCLLYALLFRSCVRHRRSASTGEVDDLALREA----GLSQPTIDALPSFVY- 462
A F FL ++ L V RR ++ R GL I LPSF Y
Sbjct: 39 ASFALSFFLITIFICLRALRVARRRRDRPLVMEQEQRRPTPPRFGLDAAAIARLPSFPYV 98
Query: 463 --RGRGESKDGAASATVDCAVCLGQVAEGEMVRQLPTC 570
R GE D A+S++V+CAVCL V EGE VRQLP C
Sbjct: 99 RARDDGEVSDSASSSSVECAVCLSAVDEGETVRQLPAC 136
>ref|XP_004969995.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Setaria italica]
Length = 238
Score = 56.6 bits (135), Expect = 4e-06
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Frame = +1
Query: 295 VAIFGFCMFLCLLYALLFRSCVRHRRSASTGEV---DDLALREAGLSQPTIDALPSFVYR 465
V++ G +FL L + R RR+A+ V A + GL I ALP+ VY
Sbjct: 44 VSVLGLALFLHLYVCHVRRR--NRRRAAAAAAVLPTTTAAAAKCGLDPAAIAALPTAVYG 101
Query: 466 GRGESKDGAASATVDCAVCLGQVAEGEMVRQLPTC 570
G + GA + +CA+CLG V EGE+VR LP C
Sbjct: 102 GEAGGEPGACT---ECAICLGNVQEGEVVRALPAC 133
>ref|XP_004954575.1| PREDICTED: uncharacterized protein LOC101785972 [Setaria italica]
Length = 457
Score = 56.6 bits (135), Expect = 4e-06
Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Frame = +1
Query: 373 SASTGEVDDLALREAGLSQPTIDALPSFVYR-------GRGESKDGAASATVDCAVCLGQ 531
+ + G V A R G+ + IDALP+F Y G G+ + GAA+ C+VCL
Sbjct: 326 AGAAGVVAARARRRFGMPKAAIDALPTFAYTVNGAEGGGGGDLESGAAAGGEQCSVCLED 385
Query: 532 VAEGEMVRQLPTC 570
V GEMVRQLP C
Sbjct: 386 VEAGEMVRQLPVC 398
>gb|EMT28533.1| RING-H2 finger protein ATL2A [Aegilops tauschii]
Length = 154
Score = 56.6 bits (135), Expect = 4e-06
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +1
Query: 313 CMFLCLL-YALLFRSCVRHRRSASTGEVDDLALREAGLSQPTIDALPSFVYRGRGESKDG 489
C +C+L AL R RHRRS+ST + + GL + IDALP+ + +
Sbjct: 10 CALVCVLGLALASRCACRHRRSSSTSSSNP---PQKGLKKKAIDALPTVSFAAAASPQPA 66
Query: 490 AASATVDCAVCLGQVAEGEMVRQLPTC 570
A +CA+CL + AEGE VR LP C
Sbjct: 67 AT----ECAICLAEFAEGEGVRVLPRC 89
>dbj|BAK02775.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 211
Score = 56.6 bits (135), Expect = 4e-06
Identities = 29/86 (33%), Positives = 40/86 (46%)
Frame = +1
Query: 313 CMFLCLLYALLFRSCVRHRRSASTGEVDDLALREAGLSQPTIDALPSFVYRGRGESKDGA 492
C +C+L L C RR S D GL + I ALP+ + G S A
Sbjct: 62 CALVCVLGLALVSRCTCRRRRRSATSSDHAPPPPKGLKKKAIHALPTVSFAANGASPTPA 121
Query: 493 ASATVDCAVCLGQVAEGEMVRQLPTC 570
++ +CA+CL + EGE +R LP C
Sbjct: 122 TCSSSECAICLAEFTEGEALRVLPRC 147
>ref|XP_002454684.1| hypothetical protein SORBIDRAFT_04g035570 [Sorghum bicolor]
gi|241934515|gb|EES07660.1| hypothetical protein
SORBIDRAFT_04g035570 [Sorghum bicolor]
Length = 442
Score = 56.6 bits (135), Expect = 4e-06
Identities = 42/113 (37%), Positives = 54/113 (47%), Gaps = 21/113 (18%)
Frame = +1
Query: 295 VAIFGFCMFLCLLYALLFRSCVRHRR------------SASTGEVDDLA-LREAGLSQPT 435
VAI F+C L LL R +R RR +A G++ L L +AG+ Q
Sbjct: 37 VAILAIVFFVCGLLHLLVRHLLRLRRRRRRAREDADSVTAFQGQLQQLFHLHDAGVDQAF 96
Query: 436 IDALPSFVYR--------GRGESKDGAASATVDCAVCLGQVAEGEMVRQLPTC 570
IDALP F+YR G GE KD DCAVCL + + + +R LP C
Sbjct: 97 IDALPVFLYRNVVGGAGDGHGEGKD-----PFDCAVCLCEFSPDDQLRLLPKC 144