BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00042229
         (377 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336062.1| predicted protein [Populus trichocarpa] gi|5...    72   6e-11
ref|XP_002298642.1| pentatricopeptide repeat-containing family p...    72   6e-11
ref|XP_006470101.1| PREDICTED: pentatricopeptide repeat-containi...    70   2e-10
ref|XP_006447022.1| hypothetical protein CICLE_v10014547mg [Citr...    70   2e-10
ref|XP_004306308.1| PREDICTED: pentatricopeptide repeat-containi...    70   4e-10
gb|EMJ16126.1| hypothetical protein PRUPE_ppa002717mg [Prunus pe...    70   4e-10
ref|XP_004233584.1| PREDICTED: pentatricopeptide repeat-containi...    65   4e-09
ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containi...    66   5e-09
emb|CBI21323.3| unnamed protein product [Vitis vinifera]               66   5e-09
ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containi...    66   5e-09
gb|ESW33676.1| hypothetical protein PHAVU_001G089400g [Phaseolus...    65   1e-08
gb|ESW33675.1| hypothetical protein PHAVU_001G089400g [Phaseolus...    65   1e-08
gb|ESW33674.1| hypothetical protein PHAVU_001G089400g [Phaseolus...    65   1e-08
ref|XP_004158532.1| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08
ref|XP_004138797.1| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08
ref|XP_006287262.1| hypothetical protein CARUB_v10000456mg [Caps...    63   3e-08
gb|EXC33394.1| hypothetical protein L484_010804 [Morus notabilis]      63   5e-08
ref|XP_004498363.1| PREDICTED: pentatricopeptide repeat-containi...    62   8e-08
ref|XP_006338715.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
ref|XP_002873646.1| pentatricopeptide repeat-containing protein ...    61   2e-07

>ref|XP_002336062.1| predicted protein [Populus trichocarpa]
           gi|566152518|ref|XP_006369836.1| pentatricopeptide
           repeat-containing family protein [Populus trichocarpa]
           gi|550348773|gb|ERP66405.1| pentatricopeptide
           repeat-containing family protein [Populus trichocarpa]
          Length = 626

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 40/105 (38%), Positives = 54/105 (51%)
 Frame = -3

Query: 372 PSLSWSPAIEQLLRFRXXXXXXXXXXXXXXXXAIIDPYLLPYHTLASGLFHWAAQQPNFF 193
           P+ SW+P +EQ L                    +IDP+LL +H+LA G F+WA+QQP F 
Sbjct: 25  PTRSWNPLLEQTLH----KIGCRDSLSQSLVARVIDPHLLTHHSLALGFFNWASQQPGFT 80

Query: 192 HTPETYHXXXXXXXXSRHPHLVRSLLKTAKSHNVPLLSSSYHLAI 58
           H   TYH        SR  + + SLLK AK+ N+ L SS Y   +
Sbjct: 81  HNSLTYHSVLKSLSFSRQFNAIESLLKRAKAQNLTLDSSIYRFVV 125


>ref|XP_002298642.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222845900|gb|EEE83447.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 567

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 40/105 (38%), Positives = 54/105 (51%)
 Frame = -3

Query: 372 PSLSWSPAIEQLLRFRXXXXXXXXXXXXXXXXAIIDPYLLPYHTLASGLFHWAAQQPNFF 193
           P+ SW+P +EQ L                    +IDP+LL +H+LA G F+WA+QQP F 
Sbjct: 25  PTRSWNPLLEQTLH----KIGCRDSLSQSLVARVIDPHLLTHHSLALGFFNWASQQPGFT 80

Query: 192 HTPETYHXXXXXXXXSRHPHLVRSLLKTAKSHNVPLLSSSYHLAI 58
           H   TYH        SR  + + SLLK AK+ N+ L SS Y   +
Sbjct: 81  HNSLTYHSVLKSLSFSRQFNAIESLLKRAKAQNLTLDSSIYRFVV 125


>ref|XP_006470101.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like isoform X2 [Citrus sinensis]
          Length = 556

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 38/106 (35%), Positives = 55/106 (51%)
 Frame = -3

Query: 375 KPSLSWSPAIEQLLRFRXXXXXXXXXXXXXXXXAIIDPYLLPYHTLASGLFHWAAQQPNF 196
           +P+  W+P +EQ L                    +I+PYLL +H+LA G F+WA+QQPNF
Sbjct: 25  RPARKWTPLLEQTLH----QLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNF 80

Query: 195 FHTPETYHXXXXXXXXSRHPHLVRSLLKTAKSHNVPLLSSSYHLAI 58
            H+P +YH        SR  + + S+LK  K + + L SS Y   I
Sbjct: 81  THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126


>ref|XP_006447022.1| hypothetical protein CICLE_v10014547mg [Citrus clementina]
           gi|568831706|ref|XP_006470100.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g14080-like isoform X1 [Citrus sinensis]
           gi|557549633|gb|ESR60262.1| hypothetical protein
           CICLE_v10014547mg [Citrus clementina]
          Length = 652

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 38/106 (35%), Positives = 55/106 (51%)
 Frame = -3

Query: 375 KPSLSWSPAIEQLLRFRXXXXXXXXXXXXXXXXAIIDPYLLPYHTLASGLFHWAAQQPNF 196
           +P+  W+P +EQ L                    +I+PYLL +H+LA G F+WA+QQPNF
Sbjct: 25  RPARKWTPLLEQTLH----QLGLRDSLSPSLVARVINPYLLTHHSLALGFFNWASQQPNF 80

Query: 195 FHTPETYHXXXXXXXXSRHPHLVRSLLKTAKSHNVPLLSSSYHLAI 58
            H+P +YH        SR  + + S+LK  K + + L SS Y   I
Sbjct: 81  THSPLSYHSILKSLSLSRQINAIDSVLKQVKVNKITLDSSVYRFII 126


>ref|XP_004306308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Fragaria vesca subsp. vesca]
          Length = 630

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 39/106 (36%), Positives = 56/106 (52%)
 Frame = -3

Query: 375 KPSLSWSPAIEQLLRFRXXXXXXXXXXXXXXXXAIIDPYLLPYHTLASGLFHWAAQQPNF 196
           KP+ SWSP++E LL                    +IDP+LL +H+LA G F+WA+QQP+F
Sbjct: 25  KPTRSWSPSLENLLH----RLGCRDSLSPQLVAGVIDPFLLNHHSLALGFFNWASQQPSF 80

Query: 195 FHTPETYHXXXXXXXXSRHPHLVRSLLKTAKSHNVPLLSSSYHLAI 58
            HT  TY         SR  + + +LLK  ++H + L +S Y   I
Sbjct: 81  SHTSLTYQSVLKSLSFSRQFNTIDALLKQVRTHKIWLDASVYRSVI 126


>gb|EMJ16126.1| hypothetical protein PRUPE_ppa002717mg [Prunus persica]
          Length = 640

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 42/125 (33%), Positives = 63/125 (50%)
 Frame = -3

Query: 375 KPSLSWSPAIEQLLRFRXXXXXXXXXXXXXXXXAIIDPYLLPYHTLASGLFHWAAQQPNF 196
           +P+ SW+P++E +L                    +IDP+LLP+H+LA G F+WA+QQP+F
Sbjct: 25  RPTRSWNPSLENILH----QLGCRDSLSPSLVARVIDPFLLPHHSLALGFFNWASQQPSF 80

Query: 195 FHTPETYHXXXXXXXXSRHPHLVRSLLKTAKSHNVPLLSSSYHLAILTWSGLSSRRRKAT 16
            HT  TY         SR  + + +LLK  K+  + L +S Y   I   + L   R+   
Sbjct: 81  SHTSITYKSVLKSLSFSRQFNAIDALLKQVKAQKIGLDASVYRSVI---ASLIIGRKTHN 137

Query: 15  TFLSF 1
            FL F
Sbjct: 138 AFLVF 142


>ref|XP_004233584.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Solanum lycopersicum]
          Length = 647

 Score = 65.1 bits (157), Expect(2) = 4e-09
 Identities = 33/93 (35%), Positives = 49/93 (52%)
 Frame = -3

Query: 363 SWSPAIEQLLRFRXXXXXXXXXXXXXXXXAIIDPYLLPYHTLASGLFHWAAQQPNFFHTP 184
           +W+PA+EQ L                    +IDP+L+ +H+LA G F+WA+QQP F H  
Sbjct: 26  TWTPALEQTL----YRLGCRESLSPTLVARVIDPFLVHHHSLALGFFNWASQQPGFSHDS 81

Query: 183 ETYHXXXXXXXXSRHPHLVRSLLKTAKSHNVPL 85
            TYH        +RH + + +LLK  K+  +PL
Sbjct: 82  STYHSILNSLCLTRHFNPLDNLLKQVKAQKIPL 114



 Score = 21.2 bits (43), Expect(2) = 4e-09
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 3/22 (13%)
 Frame = -2

Query: 67  PRHPHLVRSLLKT---AKSHNV 11
           P HP LVRSL+ +   AK  N+
Sbjct: 113 PLHPSLVRSLIASHIIAKKSNL 134


>ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Glycine max]
          Length = 647

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 30/68 (44%), Positives = 42/68 (61%)
 Frame = -3

Query: 273 IIDPYLLPYHTLASGLFHWAAQQPNFFHTPETYHXXXXXXXXSRHPHLVRSLLKTAKSHN 94
           +IDP+L  +H+LA G F+WA+QQP F HTP T+H        + H   + SLLK AK+ N
Sbjct: 50  VIDPFLKSHHSLALGFFNWASQQPGFSHTPFTFHSLLKSLSHTNHFSAIHSLLKQAKALN 109

Query: 93  VPLLSSSY 70
            P+  S +
Sbjct: 110 FPIQPSLF 117


>emb|CBI21323.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 38/106 (35%), Positives = 53/106 (50%)
 Frame = -3

Query: 375 KPSLSWSPAIEQLLRFRXXXXXXXXXXXXXXXXAIIDPYLLPYHTLASGLFHWAAQQPNF 196
           +P+ SWSP++EQ L                    +IDP+LL +H+LA G F+WA+Q+P F
Sbjct: 24  RPTRSWSPSLEQTLH----RLGCHELLSPSLVARVIDPFLLHHHSLALGFFYWASQKPGF 79

Query: 195 FHTPETYHXXXXXXXXSRHPHLVRSLLKTAKSHNVPLLSSSYHLAI 58
            HT  +Y         SR  + V  LLK  K+  + L SS Y   I
Sbjct: 80  AHTSISYQSVLKSLSISRQFNAVERLLKDVKAQKIVLDSSVYRSVI 125


>ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14080
           [Vitis vinifera]
          Length = 660

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 38/106 (35%), Positives = 53/106 (50%)
 Frame = -3

Query: 375 KPSLSWSPAIEQLLRFRXXXXXXXXXXXXXXXXAIIDPYLLPYHTLASGLFHWAAQQPNF 196
           +P+ SWSP++EQ L                    +IDP+LL +H+LA G F+WA+Q+P F
Sbjct: 24  RPTRSWSPSLEQTLH----RLGCHELLSPSLVARVIDPFLLHHHSLALGFFYWASQKPGF 79

Query: 195 FHTPETYHXXXXXXXXSRHPHLVRSLLKTAKSHNVPLLSSSYHLAI 58
            HT  +Y         SR  + V  LLK  K+  + L SS Y   I
Sbjct: 80  AHTSISYQSVLKSLSISRQFNAVERLLKDVKAQKIVLDSSVYRSVI 125


>gb|ESW33676.1| hypothetical protein PHAVU_001G089400g [Phaseolus vulgaris]
          Length = 666

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 35/89 (39%), Positives = 52/89 (58%)
 Frame = -3

Query: 273 IIDPYLLPYHTLASGLFHWAAQQPNFFHTPETYHXXXXXXXXSRHPHLVRSLLKTAKSHN 94
           +IDP+LL +++LA G F+WA+QQP F HTP TYH        + H   + SLLK AK+ N
Sbjct: 80  VIDPFLLTHYSLALGFFNWASQQPGFVHTPFTYHSLLKSLSHTNHFTAIHSLLKQAKALN 139

Query: 93  VPLLSSSYHLAILTWSGLSSRRRKATTFL 7
             +  S +  +I+      +R R+A + L
Sbjct: 140 FSIHPSLFS-SIIASHVSHNRAREAFSLL 167


>gb|ESW33675.1| hypothetical protein PHAVU_001G089400g [Phaseolus vulgaris]
          Length = 581

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 35/89 (39%), Positives = 52/89 (58%)
 Frame = -3

Query: 273 IIDPYLLPYHTLASGLFHWAAQQPNFFHTPETYHXXXXXXXXSRHPHLVRSLLKTAKSHN 94
           +IDP+LL +++LA G F+WA+QQP F HTP TYH        + H   + SLLK AK+ N
Sbjct: 80  VIDPFLLTHYSLALGFFNWASQQPGFVHTPFTYHSLLKSLSHTNHFTAIHSLLKQAKALN 139

Query: 93  VPLLSSSYHLAILTWSGLSSRRRKATTFL 7
             +  S +  +I+      +R R+A + L
Sbjct: 140 FSIHPSLFS-SIIASHVSHNRAREAFSLL 167


>gb|ESW33674.1| hypothetical protein PHAVU_001G089400g [Phaseolus vulgaris]
          Length = 671

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 35/89 (39%), Positives = 52/89 (58%)
 Frame = -3

Query: 273 IIDPYLLPYHTLASGLFHWAAQQPNFFHTPETYHXXXXXXXXSRHPHLVRSLLKTAKSHN 94
           +IDP+LL +++LA G F+WA+QQP F HTP TYH        + H   + SLLK AK+ N
Sbjct: 80  VIDPFLLTHYSLALGFFNWASQQPGFVHTPFTYHSLLKSLSHTNHFTAIHSLLKQAKALN 139

Query: 93  VPLLSSSYHLAILTWSGLSSRRRKATTFL 7
             +  S +  +I+      +R R+A + L
Sbjct: 140 FSIHPSLFS-SIIASHVSHNRAREAFSLL 167


>ref|XP_004158532.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Cucumis sativus]
          Length = 640

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 37/105 (35%), Positives = 53/105 (50%)
 Frame = -3

Query: 372 PSLSWSPAIEQLLRFRXXXXXXXXXXXXXXXXAIIDPYLLPYHTLASGLFHWAAQQPNFF 193
           P+ SW+P++EQ L                    +IDP+LL +H+LA G F+WA+QQP F 
Sbjct: 25  PAGSWTPSLEQNLH----RLGFRQMLNPSLVSQVIDPHLLSHHSLALGFFNWASQQPGFT 80

Query: 192 HTPETYHXXXXXXXXSRHPHLVRSLLKTAKSHNVPLLSSSYHLAI 58
           H  ++Y+        SRH   + SLLK  K+  + L  S Y   I
Sbjct: 81  HNSDSYNSILKSLSLSRHFGPIHSLLKQVKTQKIGLDLSVYRAVI 125


>ref|XP_004138797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Cucumis sativus]
          Length = 635

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 37/105 (35%), Positives = 53/105 (50%)
 Frame = -3

Query: 372 PSLSWSPAIEQLLRFRXXXXXXXXXXXXXXXXAIIDPYLLPYHTLASGLFHWAAQQPNFF 193
           P+ SW+P++EQ L                    +IDP+LL +H+LA G F+WA+QQP F 
Sbjct: 25  PAGSWTPSLEQNLH----RLGFRQMLNPSLVSQVIDPHLLSHHSLALGFFNWASQQPGFT 80

Query: 192 HTPETYHXXXXXXXXSRHPHLVRSLLKTAKSHNVPLLSSSYHLAI 58
           H  ++Y+        SRH   + SLLK  K+  + L  S Y   I
Sbjct: 81  HNSDSYNSILKSLSLSRHFGPIHSLLKQVKTQKIGLDLSVYRAVI 125


>ref|XP_006287262.1| hypothetical protein CARUB_v10000456mg [Capsella rubella]
           gi|482555968|gb|EOA20160.1| hypothetical protein
           CARUB_v10000456mg [Capsella rubella]
          Length = 633

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 37/101 (36%), Positives = 48/101 (47%)
 Frame = -3

Query: 360 WSPAIEQLLRFRXXXXXXXXXXXXXXXXAIIDPYLLPYHTLASGLFHWAAQQPNFFHTPE 181
           WSP++EQ L                    +IDP+LL +H+LA G F+WAAQQP + H   
Sbjct: 28  WSPSVEQSLH----SLGFRNSISPSLVARVIDPFLLNHHSLALGFFNWAAQQPGYSHDSV 83

Query: 180 TYHXXXXXXXXSRHPHLVRSLLKTAKSHNVPLLSSSYHLAI 58
           +YH        SR    +  L K  KSH + L SS Y   I
Sbjct: 84  SYHSIFKSLSLSRQFSAIDVLFKQVKSHKILLDSSVYRSLI 124


>gb|EXC33394.1| hypothetical protein L484_010804 [Morus notabilis]
          Length = 619

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 39/125 (31%), Positives = 62/125 (49%)
 Frame = -3

Query: 375 KPSLSWSPAIEQLLRFRXXXXXXXXXXXXXXXXAIIDPYLLPYHTLASGLFHWAAQQPNF 196
           +P+ SW+P++E  L                    +ID +LLP+H+LA G F+WA+QQP F
Sbjct: 26  RPTRSWTPSLELTLH----RLAFRDSLTPSLVARVIDSFLLPHHSLALGFFNWASQQPGF 81

Query: 195 FHTPETYHXXXXXXXXSRHPHLVRSLLKTAKSHNVPLLSSSYHLAILTWSGLSSRRRKAT 16
            H+  +Y         SR  + + +LL+  K++ V L SS+Y   I   + L +  +   
Sbjct: 82  SHSSISYQSILKSLSFSRQFNAIDALLRQLKANKVSLHSSAYSSII---ASLIAGNKARN 138

Query: 15  TFLSF 1
            FL F
Sbjct: 139 AFLVF 143


>ref|XP_004498363.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like isoform X1 [Cicer arietinum]
          Length = 640

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
 Frame = -3

Query: 273 IIDPYLLPYHTLASGLFHWAAQQPNFFHTPETYH-XXXXXXXXSRHPHLVRSLLKTAKSH 97
           IIDP+LL +H+LA G F+WA+QQP F HT  T+H           H H + SLLK A+S+
Sbjct: 60  IIDPFLLNHHSLALGFFNWASQQPGFNHTSTTFHSILKSLSLTPHHSHSLLSLLKQAQSN 119

Query: 96  NVPLLSSSYHLAI 58
           N  +  S +   I
Sbjct: 120 NFTIHPSVFRSVI 132


>ref|XP_006338715.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Solanum tuberosum]
          Length = 650

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 34/104 (32%), Positives = 49/104 (47%)
 Frame = -3

Query: 369 SLSWSPAIEQLLRFRXXXXXXXXXXXXXXXXAIIDPYLLPYHTLASGLFHWAAQQPNFFH 190
           S +W+PA+EQ L                    +IDP+L+ +H+LA G F+WA+QQP F H
Sbjct: 25  SQTWTPALEQTL----YRLGCRESLSPTLVARVIDPFLVHHHSLALGFFNWASQQPGFSH 80

Query: 189 TPETYHXXXXXXXXSRHPHLVRSLLKTAKSHNVPLLSSSYHLAI 58
              TYH        +R  + +  L K  K+  + L  S Y   I
Sbjct: 81  DSSTYHSILNSLCITRQFNTLDKLFKQVKAQKIRLYPSLYRSVI 124


>ref|XP_002873646.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297319483|gb|EFH49905.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 634

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/101 (35%), Positives = 49/101 (48%)
 Frame = -3

Query: 360 WSPAIEQLLRFRXXXXXXXXXXXXXXXXAIIDPYLLPYHTLASGLFHWAAQQPNFFHTPE 181
           WSP++EQ L                    +IDP+LL +H+LA G F+WAAQQP + H   
Sbjct: 28  WSPSVEQSLH----GLGFRHSISPSLVARVIDPFLLNHHSLALGFFNWAAQQPGYSHDSV 83

Query: 180 TYHXXXXXXXXSRHPHLVRSLLKTAKSHNVPLLSSSYHLAI 58
           +YH        SR    + +L K  KS+ + L SS Y   I
Sbjct: 84  SYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLI 124