BLASTX nr result

ID: Zingiber25_contig00042152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00042152
         (272 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ94340.1| predicted protein [Hordeum vulgare subsp. vulgare]     66   5e-09

>dbj|BAJ94340.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 142

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 49/94 (52%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
 Frame = -1

Query: 272 RLVSQNIHSCRLRAFALPCLTACVAQFFLGCLRKLPPESFRLAR---LESLCCSI-LPWD 105
           RLVSQNI  CRLRAFALP L A  A  FLGCL  +    F L     +E  C  + +  D
Sbjct: 8   RLVSQNIRRCRLRAFALPGLRANAANSFLGCLSLVNIPIFILFLFYFVEFHCIFLCIAND 67

Query: 104 V*ER*IVSLFRSGRLSAFALPGLRAYAA*FFLGC 3
              +   S  RS RL AFALPGLRA AA  FLGC
Sbjct: 68  DKFKACFSNIRSCRLRAFALPGLRADAARSFLGC 101


Top