BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00042137
         (263 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW75283.1| hypothetical protein ZEAMMB73_918312 [Zea mays]         86   5e-15
gb|AFW75282.1| hypothetical protein ZEAMMB73_918312 [Zea mays]         86   5e-15
gb|EAZ42119.1| hypothetical protein OsJ_26678 [Oryza sativa Japo...    84   2e-14
gb|EAZ06297.1| hypothetical protein OsI_28532 [Oryza sativa Indi...    84   2e-14
ref|XP_004973130.1| PREDICTED: uncharacterized protein LOC101766...    84   2e-14
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...    83   4e-14
emb|CBI17549.3| unnamed protein product [Vitis vinifera]               83   4e-14
ref|XP_006659992.1| PREDICTED: DNA-directed RNA polymerase III s...    82   7e-14
gb|EMT00869.1| DNA-directed RNA polymerase III subunit RPC5 [Aeg...    80   2e-13
dbj|BAJ95336.1| predicted protein [Hordeum vulgare subsp. vulgar...    79   8e-13
dbj|BAK01665.1| predicted protein [Hordeum vulgare subsp. vulgare]     78   1e-12
gb|EMS67664.1| DNA-directed RNA polymerase III subunit RPC5 [Tri...    78   1e-12
gb|EOX91150.1| Transcription regulators,zinc ion binding, putati...    72   8e-11
gb|EOX91149.1| Transcription regulators,zinc ion binding, putati...    72   8e-11
gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theo...    72   8e-11
ref|XP_003573633.1| PREDICTED: DNA-directed RNA polymerase III s...    71   1e-10
ref|XP_006355444.1| PREDICTED: DNA-directed RNA polymerase III s...    71   2e-10
ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III s...    71   2e-10
ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III s...    71   2e-10
ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citr...    71   2e-10

>gb|AFW75283.1| hypothetical protein ZEAMMB73_918312 [Zea mays]
          Length = 677

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 45/87 (51%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
 Frame = -2

Query: 262 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKRTQAF-SLRHLLSL 86
           Y P  S+   +YH KMIA +   I F +  S Y+ SL PG ST  KR   F ++R +L L
Sbjct: 282 YQPAGSNTATKYHDKMIANEGVPIDFTMSSSCYLTSLCPGASTSRKRINKFQAIREMLLL 341

Query: 85  PLEKRLKKWFSEVCQVNNFNALLDLAP 5
           PLE+RLKKWF+EV  VN F+AL DLAP
Sbjct: 342 PLEERLKKWFTEVSGVNRFDALKDLAP 368


>gb|AFW75282.1| hypothetical protein ZEAMMB73_918312 [Zea mays]
          Length = 618

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 45/87 (51%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
 Frame = -2

Query: 262 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKRTQAF-SLRHLLSL 86
           Y P  S+   +YH KMIA +   I F +  S Y+ SL PG ST  KR   F ++R +L L
Sbjct: 223 YQPAGSNTATKYHDKMIANEGVPIDFTMSSSCYLTSLCPGASTSRKRINKFQAIREMLLL 282

Query: 85  PLEKRLKKWFSEVCQVNNFNALLDLAP 5
           PLE+RLKKWF+EV  VN F+AL DLAP
Sbjct: 283 PLEERLKKWFTEVSGVNRFDALKDLAP 309


>gb|EAZ42119.1| hypothetical protein OsJ_26678 [Oryza sativa Japonica Group]
          Length = 673

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 40/87 (45%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
 Frame = -2

Query: 262 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDK-RTQAFSLRHLLSL 86
           Y    S+   +YH +M+++D   I F +  SDY+ SL PG ST+ + + ++ ++R +L L
Sbjct: 282 YQQAGSNVARKYHAEMVSDDGGPIDFTMSTSDYVMSLCPGGSTNSRDKNKSHAIREMLKL 341

Query: 85  PLEKRLKKWFSEVCQVNNFNALLDLAP 5
           PLE+RLKKWF+EV QVN F+AL+ LAP
Sbjct: 342 PLEERLKKWFTEVSQVNRFDALMHLAP 368


>gb|EAZ06297.1| hypothetical protein OsI_28532 [Oryza sativa Indica Group]
          Length = 673

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 40/87 (45%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
 Frame = -2

Query: 262 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDK-RTQAFSLRHLLSL 86
           Y    S+   +YH +M+++D   I F +  SDY+ SL PG ST+ + + ++ ++R +L L
Sbjct: 282 YQQAGSNVARKYHAEMVSDDGGPIDFTMSTSDYVMSLCPGGSTNSRDKNKSHAIREMLKL 341

Query: 85  PLEKRLKKWFSEVCQVNNFNALLDLAP 5
           PLE+RLKKWF+EV QVN F+AL+ LAP
Sbjct: 342 PLEERLKKWFTEVSQVNRFDALMHLAP 368


>ref|XP_004973130.1| PREDICTED: uncharacterized protein LOC101766969 [Setaria italica]
          Length = 449

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 41/87 (47%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
 Frame = -2

Query: 262 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKR-TQAFSLRHLLSL 86
           Y P  S+ + +YH KMI+ +   I F ++ SDY+ SL PG ST  +   +  ++R +L L
Sbjct: 56  YQPTGSNISTKYHDKMISNEGGPIDFTMRNSDYVMSLCPGASTSSRHINKCQAIREMLLL 115

Query: 85  PLEKRLKKWFSEVCQVNNFNALLDLAP 5
           PLE+RLKKWF+EV +VN F+AL  LAP
Sbjct: 116 PLEERLKKWFTEVSEVNQFDALKHLAP 142


>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
           vinifera]
          Length = 672

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
 Frame = -2

Query: 262 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLY-PGTSTDDKRTQAFSLRHLLSL 86
           YH  +S F+ RY QKM+AED+  I F++ P +Y+NSL  PG S DD R++  S R LLS+
Sbjct: 264 YHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSM 323

Query: 85  PLEKRLKKWFSEVCQVNNFNALLDLAPD 2
           PLE+R K    E   V+ F+AL   APD
Sbjct: 324 PLEERFKTLLCEGPPVHRFSALKHFAPD 351


>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
 Frame = -2

Query: 262 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLY-PGTSTDDKRTQAFSLRHLLSL 86
           YH  +S F+ RY QKM+AED+  I F++ P +Y+NSL  PG S DD R++  S R LLS+
Sbjct: 280 YHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSM 339

Query: 85  PLEKRLKKWFSEVCQVNNFNALLDLAPD 2
           PLE+R K    E   V+ F+AL   APD
Sbjct: 340 PLEERFKTLLCEGPPVHRFSALKHFAPD 367


>ref|XP_006659992.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Oryza
           brachyantha]
          Length = 682

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 40/86 (46%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
 Frame = -2

Query: 262 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKRT-QAFSLRHLLSL 86
           Y P  S+   +YH +M++ +   I F +  SDY+ SL PG ST  K   ++ ++R +L L
Sbjct: 289 YQPAGSNIASKYHAEMVSNEGGPIDFTMNTSDYLMSLCPGGSTGSKGVNRSHAIREMLKL 348

Query: 85  PLEKRLKKWFSEVCQVNNFNALLDLA 8
           PLE+RLKKWF+EV QVN F+AL+ LA
Sbjct: 349 PLEERLKKWFTEVSQVNQFDALMHLA 374


>gb|EMT00869.1| DNA-directed RNA polymerase III subunit RPC5 [Aegilops tauschii]
          Length = 576

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 45/89 (50%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
 Frame = -2

Query: 262 YHPIDSHFTDRYHQKMIAEDHHQI-PFMIKPSDYINSLYPGTSTDDKRTQAFS-LRHLLS 89
           Y P  S    RY+ +M+A +   I  F +   DY  SL PG  T  KRT     LR +LS
Sbjct: 189 YEPAGSDVASRYYAEMMANEGRPIMDFTMSTQDYAMSLCPGGPTGSKRTNRCEVLREMLS 248

Query: 88  LPLEKRLKKWFSEVCQVNNFNALLDLAPD 2
           LPLE RLKKWF+EV QVN F+AL+ LAPD
Sbjct: 249 LPLEVRLKKWFTEVSQVNRFDALMHLAPD 277


>dbj|BAJ95336.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326526307|dbj|BAJ97170.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 676

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
 Frame = -2

Query: 262 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKR-TQAFSLRHLLSL 86
           Y P  S    +Y+ +M+A +   I F +   DY  SL PG  T  K   +  ++R +LSL
Sbjct: 282 YEPAGSDVASKYYAEMVASEGRPIDFTMSTQDYAASLCPGGPTGSKNINRCQAIREMLSL 341

Query: 85  PLEKRLKKWFSEVCQVNNFNALLDLAPD 2
           PLE+RLKKWF+EV QV+ F AL+ LAPD
Sbjct: 342 PLEERLKKWFTEVSQVSQFVALMHLAPD 369


>dbj|BAK01665.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 677

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
 Frame = -2

Query: 262 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKR-TQAFSLRHLLSL 86
           Y P  S    +Y+ +M+A +   I F +   DY  SL PG  T  K   +  ++R +LSL
Sbjct: 283 YEPAGSDVASKYYAEMVASEGRPIDFTMSTQDYAVSLCPGGPTGSKNINRCQAIREMLSL 342

Query: 85  PLEKRLKKWFSEVCQVNNFNALLDLAPD 2
           PLE+RLKKWF+EV QV+ F AL+ LAPD
Sbjct: 343 PLEERLKKWFTEVSQVSQFVALMHLAPD 370


>gb|EMS67664.1| DNA-directed RNA polymerase III subunit RPC5 [Triticum urartu]
          Length = 590

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
 Frame = -2

Query: 262 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKR-TQAFSLRHLLSL 86
           Y P  S    +Y+ +M+A +   I F +   DY  SL PG  T  K   ++ ++R +LSL
Sbjct: 196 YEPAGSDVASKYYAEMVASEGRPIDFTMSTHDYALSLCPGGPTGSKNINRSQAIREMLSL 255

Query: 85  PLEKRLKKWFSEVCQVNNFNALLDLAPD 2
           PLE+RLKKWF+EV QV  F AL+ LAPD
Sbjct: 256 PLEERLKKWFTEVSQVTRFVALMHLAPD 283


>gb|EOX91150.1| Transcription regulators,zinc ion binding, putative isoform 3
           [Theobroma cacao]
          Length = 736

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 40/87 (45%), Positives = 56/87 (64%)
 Frame = -2

Query: 262 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKRTQAFSLRHLLSLP 83
           YH   + F+ +Y Q+M+AE+  +I F + P DY++SL PG S ++K  Q  S R LLS+P
Sbjct: 298 YHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNNK-AQGPSRRLLLSIP 356

Query: 82  LEKRLKKWFSEVCQVNNFNALLDLAPD 2
           LE+RLKK  SE    + F+AL   APD
Sbjct: 357 LEERLKKLLSEGPPFHRFSALKHFAPD 383


>gb|EOX91149.1| Transcription regulators,zinc ion binding, putative isoform 2
           [Theobroma cacao]
          Length = 588

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 40/87 (45%), Positives = 56/87 (64%)
 Frame = -2

Query: 262 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKRTQAFSLRHLLSLP 83
           YH   + F+ +Y Q+M+AE+  +I F + P DY++SL PG S ++K  Q  S R LLS+P
Sbjct: 201 YHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNNK-AQGPSRRLLLSIP 259

Query: 82  LEKRLKKWFSEVCQVNNFNALLDLAPD 2
           LE+RLKK  SE    + F+AL   APD
Sbjct: 260 LEERLKKLLSEGPPFHRFSALKHFAPD 286


>gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
          Length = 700

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 40/87 (45%), Positives = 56/87 (64%)
 Frame = -2

Query: 262 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKRTQAFSLRHLLSLP 83
           YH   + F+ +Y Q+M+AE+  +I F + P DY++SL PG S ++K  Q  S R LLS+P
Sbjct: 298 YHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNNK-AQGPSRRLLLSIP 356

Query: 82  LEKRLKKWFSEVCQVNNFNALLDLAPD 2
           LE+RLKK  SE    + F+AL   APD
Sbjct: 357 LEERLKKLLSEGPPFHRFSALKHFAPD 383


>ref|XP_003573633.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
           [Brachypodium distachyon]
          Length = 663

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
 Frame = -2

Query: 262 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKR-TQAFSLRHLLSL 86
           Y P  S    +Y  +M++ +   I F +  SDY  SL PG  T  K   +  ++R +L L
Sbjct: 272 YEPAGSDAASKYLDEMVSNEGSPIGFNMSTSDYWMSLCPGAPTGRKNINKCQAIREMLVL 331

Query: 85  PLEKRLKKWFSEVCQVNNFNALLDLAP 5
           PLE RLKKWF+EV QV+ F+AL+ LAP
Sbjct: 332 PLEDRLKKWFTEVSQVSRFDALMHLAP 358


>ref|XP_006355444.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
           isoform X4 [Solanum tuberosum]
          Length = 536

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 36/87 (41%), Positives = 50/87 (57%)
 Frame = -2

Query: 262 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKRTQAFSLRHLLSLP 83
           YH   S  + RY QKM  E+   +PF + P DY+N+ +PG  TD  R +    R L  LP
Sbjct: 268 YHGARSDISARYLQKMAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLKILRTR-LSQLP 326

Query: 82  LEKRLKKWFSEVCQVNNFNALLDLAPD 2
           LE+R++ W  E   ++ F+AL  LAPD
Sbjct: 327 LEERVRTWLLEGPPIHRFDALKHLAPD 353


>ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
           isoform X2 [Solanum tuberosum]
          Length = 657

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 36/87 (41%), Positives = 50/87 (57%)
 Frame = -2

Query: 262 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKRTQAFSLRHLLSLP 83
           YH   S  + RY QKM  E+   +PF + P DY+N+ +PG  TD  R +    R L  LP
Sbjct: 256 YHGARSDISARYLQKMAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLKILRTR-LSQLP 314

Query: 82  LEKRLKKWFSEVCQVNNFNALLDLAPD 2
           LE+R++ W  E   ++ F+AL  LAPD
Sbjct: 315 LEERVRTWLLEGPPIHRFDALKHLAPD 341


>ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
           isoform X1 [Solanum tuberosum]
          Length = 669

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 36/87 (41%), Positives = 50/87 (57%)
 Frame = -2

Query: 262 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKRTQAFSLRHLLSLP 83
           YH   S  + RY QKM  E+   +PF + P DY+N+ +PG  TD  R +    R L  LP
Sbjct: 268 YHGARSDISARYLQKMAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLKILRTR-LSQLP 326

Query: 82  LEKRLKKWFSEVCQVNNFNALLDLAPD 2
           LE+R++ W  E   ++ F+AL  LAPD
Sbjct: 327 LEERVRTWLLEGPPIHRFDALKHLAPD 353


>ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
           gi|568824759|ref|XP_006466762.1| PREDICTED: DNA-directed
           RNA polymerase III subunit RPC5-like [Citrus sinensis]
           gi|557527707|gb|ESR38957.1| hypothetical protein
           CICLE_v10025048mg [Citrus clementina]
          Length = 690

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 35/87 (40%), Positives = 54/87 (62%)
 Frame = -2

Query: 262 YHPIDSHFTDRYHQKMIAEDHHQIPFMIKPSDYINSLYPGTSTDDKRTQAFSLRHLLSLP 83
           YH   S F+ RY Q+M+ E++  I F + P DY++SL PG  +++ +++  S R LLS+P
Sbjct: 287 YHGSKSDFSARYLQRMLVEENSPIHFTMNPYDYVSSLCPGAGSNNTKSKGPSRRFLLSMP 346

Query: 82  LEKRLKKWFSEVCQVNNFNALLDLAPD 2
           LE+R KK   E   V  F+ L+  AP+
Sbjct: 347 LEERFKKLLCEGEPVQRFSTLMHFAPN 373