BLASTX nr result
ID: Zingiber25_contig00042134
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00042134
(374 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY16505.1| Tetratricopeptide repeat-like superfamily protein... 62 8e-10
sp|Q9LP03.1|PPR73_ARATH RecName: Full=Pentatricopeptide repeat-c... 68 1e-09
ref|NP_175064.2| pentatricopeptide repeat-containing protein [Ar... 68 1e-09
ref|XP_002306667.1| pentatricopeptide repeat-containing family p... 63 1e-09
ref|XP_006303707.1| hypothetical protein CARUB_v10011813mg [Caps... 65 9e-09
ref|XP_006393752.1| hypothetical protein EUTSA_v10011320mg [Eutr... 65 1e-08
ref|XP_002520264.1| pentatricopeptide repeat-containing protein,... 65 1e-08
gb|EMJ01470.1| hypothetical protein PRUPE_ppa014901mg [Prunus pe... 64 2e-08
ref|XP_003522561.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containi... 64 3e-08
emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera] 64 3e-08
ref|XP_002893972.1| F9C16.15 [Arabidopsis lyrata subsp. lyrata] ... 62 8e-08
gb|EXB37670.1| hypothetical protein L484_021877 [Morus notabilis] 62 1e-07
ref|XP_006581604.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
ref|XP_004503044.1| PREDICTED: pentatricopeptide repeat-containi... 61 1e-07
ref|XP_004292628.1| PREDICTED: pentatricopeptide repeat-containi... 61 1e-07
ref|XP_002436856.1| hypothetical protein SORBIDRAFT_10g010013 [S... 55 4e-07
gb|AFW76892.1| hypothetical protein ZEAMMB73_583413 [Zea mays] 53 2e-06
ref|XP_006356335.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
ref|XP_006434328.1| hypothetical protein CICLE_v10000854mg [Citr... 57 3e-06
>gb|EOY16505.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao]
Length = 645
Score = 62.0 bits (149), Expect(2) = 8e-10
Identities = 27/52 (51%), Positives = 39/52 (75%)
Frame = +1
Query: 28 LCFKMGFLSNSVVFSAVIDMYSICGRLDKVVQVFHEMPRCDSAFCNSIFASY 183
LC K+GF+SNS+V SA ID++S C RL+ V++F E+ R DS C+S+ +SY
Sbjct: 272 LCVKVGFISNSIVSSATIDLFSKCNRLEDSVKLFEEVERWDSVLCSSMISSY 323
Score = 26.6 bits (57), Expect(2) = 8e-10
Identities = 10/18 (55%), Positives = 17/18 (94%)
Frame = +3
Query: 183 SRSGLEDEALMLFVVTLK 236
+R GL+D+AL+LFV++L+
Sbjct: 324 ARHGLQDDALLLFVLSLR 341
>sp|Q9LP03.1|PPR73_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g43980, mitochondrial; Flags: Precursor
gi|8778677|gb|AAF79685.1|AC022314_26 F9C16.15
[Arabidopsis thaliana]
Length = 633
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/64 (53%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Frame = +1
Query: 1 LMHLAKSEQ---LCFKMGFLSNSVVFSAVIDMYSICGRLDKVVQVFHEMPRCDSAFCNSI 171
L L+K +Q LC KMGFLSNS+V A IDM+S C RLD V++F E+ + DS CNS+
Sbjct: 260 LRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSM 319
Query: 172 FASY 183
SY
Sbjct: 320 IGSY 323
>ref|NP_175064.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332193889|gb|AEE32010.1| pentatricopeptide
repeat-containing protein-like protein [Arabidopsis
thaliana]
Length = 621
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/64 (53%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Frame = +1
Query: 1 LMHLAKSEQ---LCFKMGFLSNSVVFSAVIDMYSICGRLDKVVQVFHEMPRCDSAFCNSI 171
L L+K +Q LC KMGFLSNS+V A IDM+S C RLD V++F E+ + DS CNS+
Sbjct: 248 LRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSM 307
Query: 172 FASY 183
SY
Sbjct: 308 IGSY 311
>ref|XP_002306667.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222856116|gb|EEE93663.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 630
Score = 62.8 bits (151), Expect(2) = 1e-09
Identities = 31/70 (44%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Frame = +1
Query: 1 LMHLAKSEQ---LCFKMGFLSNSVVFSAVIDMYSICGRLDKVVQVFHEMPRCDSAFCNSI 171
L +L K +Q LC K+GFL N+++ SA ID++S C RL+ V++F E + DSA CNS+
Sbjct: 260 LRNLEKGKQIFALCVKVGFLCNTIISSATIDLFSKCNRLEDSVRLFEEQDQWDSAVCNSM 319
Query: 172 FASYLEVDLR 201
+SY R
Sbjct: 320 ISSYARCGFR 329
Score = 25.0 bits (53), Expect(2) = 1e-09
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 183 SRSGLEDEALMLFVVTLKLKSNVDIDIDDSVPHSMHYVLLFQG 311
+R G ++ L LFV+TLK SV HS + L QG
Sbjct: 324 ARCGFREDGLRLFVLTLKKDIRPTEFTLSSVLHSTSILKLEQG 366
>ref|XP_006303707.1| hypothetical protein CARUB_v10011813mg [Capsella rubella]
gi|482572418|gb|EOA36605.1| hypothetical protein
CARUB_v10011813mg [Capsella rubella]
Length = 621
Score = 65.1 bits (157), Expect = 9e-09
Identities = 33/64 (51%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Frame = +1
Query: 1 LMHLAKSEQ---LCFKMGFLSNSVVFSAVIDMYSICGRLDKVVQVFHEMPRCDSAFCNSI 171
L L K +Q LC KMGF NSVV A IDM+S C RLD V++F E+ + DS CNS+
Sbjct: 248 LRDLCKGKQAIALCIKMGFFGNSVVLGAAIDMFSKCKRLDDSVKLFRELEKWDSVLCNSM 307
Query: 172 FASY 183
SY
Sbjct: 308 IGSY 311
>ref|XP_006393752.1| hypothetical protein EUTSA_v10011320mg [Eutrema salsugineum]
gi|557090330|gb|ESQ31038.1| hypothetical protein
EUTSA_v10011320mg [Eutrema salsugineum]
Length = 624
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/56 (51%), Positives = 39/56 (69%)
Frame = +1
Query: 16 KSEQLCFKMGFLSNSVVFSAVIDMYSICGRLDKVVQVFHEMPRCDSAFCNSIFASY 183
K+ LC KMGFLSN++V A IDM+S C RL+ V++F E+ + DS CNS+ SY
Sbjct: 255 KAIALCIKMGFLSNTIVSGAAIDMFSKCNRLEDSVKLFRELEKWDSVLCNSLVGSY 310
>ref|XP_002520264.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540483|gb|EEF42050.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 524
Score = 64.7 bits (156), Expect = 1e-08
Identities = 31/64 (48%), Positives = 46/64 (71%), Gaps = 3/64 (4%)
Frame = +1
Query: 1 LMHLAKSEQL---CFKMGFLSNSVVFSAVIDMYSICGRLDKVVQVFHEMPRCDSAFCNSI 171
L +L K +Q+ C K+GFLSN++V SA ID++S C RL+ VQ+F E+ + +SA CNS+
Sbjct: 153 LRNLDKGKQIFAFCLKVGFLSNTIVSSAAIDLFSKCNRLEDSVQLFEELDQLNSALCNSM 212
Query: 172 FASY 183
+SY
Sbjct: 213 ISSY 216
>gb|EMJ01470.1| hypothetical protein PRUPE_ppa014901mg [Prunus persica]
Length = 629
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
Frame = +1
Query: 1 LMHLAKSEQL---CFKMGFLSNSVVFSAVIDMYSICGRLDKVVQVFHEMPRCDSAFCNSI 171
L +L K +Q+ C K+GFLSNS++ SA ID++S C RL+ +++F E+ DSA CNS+
Sbjct: 257 LPNLEKGKQIFAFCLKVGFLSNSIISSAAIDLFSKCNRLEDAIRLFEELDWWDSAVCNSM 316
Query: 172 FASY 183
+SY
Sbjct: 317 ISSY 320
>ref|XP_003522561.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Glycine max]
Length = 630
Score = 63.9 bits (154), Expect = 2e-08
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Frame = +1
Query: 1 LMHLAKSEQL---CFKMGFLSNSVVFSAVIDMYSICGRLDKVVQVFHEMPRCDSAFCNSI 171
L L K +Q+ CFKMGF+ NS+V SA ID++S C RL+ V++F E + DSA CNS+
Sbjct: 259 LRDLDKGKQVFAFCFKMGFVYNSIVSSAAIDLFSKCNRLEDSVRLFKEQDQWDSALCNSM 318
Query: 172 FASY 183
+SY
Sbjct: 319 ISSY 322
>ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Vitis vinifera]
Length = 665
Score = 63.5 bits (153), Expect = 3e-08
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Frame = +1
Query: 1 LMHLAKSEQ---LCFKMGFLSNSVVFSAVIDMYSICGRLDKVVQVFHEMPRCDSAFCNSI 171
L L K EQ LC ++GFLSNS+V SA ID++S C RL+ V+VF E+ + DS CN++
Sbjct: 281 LQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAM 340
Query: 172 FASY 183
+SY
Sbjct: 341 ISSY 344
>emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 63.5 bits (153), Expect = 3e-08
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Frame = +1
Query: 1 LMHLAKSEQ---LCFKMGFLSNSVVFSAVIDMYSICGRLDKVVQVFHEMPRCDSAFCNSI 171
L L K EQ LC ++GFLSNS+V SA ID++S C RL+ V+VF E+ + DS CN++
Sbjct: 954 LQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAM 1013
Query: 172 FASY 183
+SY
Sbjct: 1014 ISSY 1017
>ref|XP_002893972.1| F9C16.15 [Arabidopsis lyrata subsp. lyrata]
gi|297339814|gb|EFH70231.1| F9C16.15 [Arabidopsis lyrata
subsp. lyrata]
Length = 599
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Frame = +1
Query: 1 LMHLAKSEQ---LCFKMGFLSNSVVFSAVIDMYSICGRLDKVVQVFHEMPRCDSAFCNSI 171
L L K +Q LC KMGFL N++V + IDM+S C RLD V++F ++ + DS CNS+
Sbjct: 248 LQDLCKGKQAIALCIKMGFLFNNIVLGSGIDMFSKCNRLDDSVKLFRQLEKWDSVLCNSM 307
Query: 172 FASY 183
SY
Sbjct: 308 IGSY 311
>gb|EXB37670.1| hypothetical protein L484_021877 [Morus notabilis]
Length = 494
Score = 61.6 bits (148), Expect = 1e-07
Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Frame = +1
Query: 10 LAKSEQL---CFKMGFLSNSVVFSAVIDMYSICGRLDKVVQVFHEMPRCDSAFCNSIFAS 180
L K +Q+ CFK+GF SN++V SA ID+ S C RL+ +VF ++ R DSA CNS+ +S
Sbjct: 126 LEKGKQIFAFCFKVGFFSNTIVSSAAIDLLSKCNRLEDAERVFSDLNRWDSAVCNSMISS 185
Query: 181 Y 183
Y
Sbjct: 186 Y 186
>ref|XP_006581604.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Glycine max]
Length = 630
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Frame = +1
Query: 1 LMHLAKSEQL---CFKMGFLSNSVVFSAVIDMYSICGRLDKVVQVFHEMPRCDSAFCNSI 171
L L K +Q+ CFKMGF+ NS+V SA ID++S C RL+ V++F + + DS CNS+
Sbjct: 259 LRDLDKGKQVFAFCFKMGFIYNSIVSSAAIDLFSKCNRLEDSVRLFKKQDQWDSPLCNSM 318
Query: 172 FASYLEVDL 198
+S+ DL
Sbjct: 319 ISSFARHDL 327
>ref|XP_004503044.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Cicer arietinum]
Length = 643
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Frame = +1
Query: 1 LMHLAKSEQL---CFKMGFLSNSVVFSAVIDMYSICGRLDKVVQVFHEMPRCDSAFCNSI 171
L L K +Q+ CFK+GF+ NS+V SA ID++S C RL+ V++F E + +SA CNS+
Sbjct: 259 LRDLEKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDAVRLFKEHEQWNSALCNSM 318
Query: 172 FASYLEVDL 198
+ Y DL
Sbjct: 319 ISCYARHDL 327
>ref|XP_004292628.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 528
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Frame = +1
Query: 1 LMHLAKSEQLC---FKMGFLSNSVVFSAVIDMYSICGRLDKVVQVFHEMPRCDSAFCNSI 171
L+ LA+ +Q+ K+GF SNS+V SA IDM+S C RL+ V +F E+ DSA CNS+
Sbjct: 153 LLDLARGKQIIAFSLKVGFFSNSIVSSAAIDMFSKCNRLEDAVLLFQELSWSDSAVCNSM 212
Query: 172 FASY 183
+SY
Sbjct: 213 ISSY 216
>ref|XP_002436856.1| hypothetical protein SORBIDRAFT_10g010013 [Sorghum bicolor]
gi|241915079|gb|EER88223.1| hypothetical protein
SORBIDRAFT_10g010013 [Sorghum bicolor]
Length = 626
Score = 55.1 bits (131), Expect(2) = 4e-07
Identities = 29/60 (48%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Frame = +1
Query: 13 AKSEQ---LCFKMGFLSNSVVFSAVIDMYSICGRLDKVVQVFHEMPRCDSAFCNSIFASY 183
AK +Q LC KM FL+NS+V SAVID + RL VQ F EMP S CN++ + Y
Sbjct: 250 AKGDQMLSLCIKMNFLTNSIVSSAVIDFLCVSDRLSDAVQFFREMPTWASEPCNALISGY 309
Score = 24.3 bits (51), Expect(2) = 4e-07
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +3
Query: 183 SRSGLEDEALMLFVVTLK 236
+RSGL +EAL LF V+++
Sbjct: 310 ARSGLMEEALSLFAVSMR 327
>gb|AFW76892.1| hypothetical protein ZEAMMB73_583413 [Zea mays]
Length = 639
Score = 53.1 bits (126), Expect(2) = 2e-06
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Frame = +1
Query: 10 LAKSEQ---LCFKMGFLSNSVVFSAVIDMYSICGRLDKVVQVFHEMPRCDSAFCNSIFAS 180
L K +Q LC KMGFL+N +V SA+ID + RL +Q+F EMP S CN++ +
Sbjct: 262 LVKGDQMLALCIKMGFLTNFMVSSAIIDFLCMSDRLSDALQLFREMPTWGSEPCNALISG 321
Query: 181 Y 183
Y
Sbjct: 322 Y 322
Score = 24.3 bits (51), Expect(2) = 2e-06
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +3
Query: 183 SRSGLEDEALMLFVVTLK 236
+RSGL +EAL LF V+++
Sbjct: 323 ARSGLMEEALSLFAVSMR 340
>ref|XP_006356335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Solanum tuberosum]
Length = 644
Score = 56.6 bits (135), Expect = 3e-06
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Frame = +1
Query: 1 LMHLAKSEQ---LCFKMGFLSNSVVFSAVIDMYSICGRLDKVVQVFHEMPRCDSAFCNSI 171
L L K +Q LC KMGFL N++V SA ID++S C R++ ++F + D+A CNS+
Sbjct: 273 LRSLEKGKQILCLCVKMGFLCNAIVSSAAIDLFSNCNRIEYSARIFKDSNIWDTALCNSM 332
Query: 172 FASY 183
+SY
Sbjct: 333 ISSY 336
>ref|XP_006434328.1| hypothetical protein CICLE_v10000854mg [Citrus clementina]
gi|557536450|gb|ESR47568.1| hypothetical protein
CICLE_v10000854mg [Citrus clementina]
Length = 523
Score = 56.6 bits (135), Expect = 3e-06
Identities = 29/64 (45%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Frame = +1
Query: 1 LMHLAKSEQ---LCFKMGFLSNSVVFSAVIDMYSICGRLDKVVQVFHEMPRCDSAFCNSI 171
L +L K +Q L K+GFLSNS+V SA ID++S C RL+ V++F ++ R DSA N +
Sbjct: 142 LRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDSAVINVV 201
Query: 172 FASY 183
++Y
Sbjct: 202 ISTY 205