BLASTX nr result
ID: Zingiber25_contig00041991
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00041991
(329 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002522400.1| pentatricopeptide repeat-containing protein,... 96 5e-18
ref|XP_004486021.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 91 2e-16
gb|EMJ23502.1| hypothetical protein PRUPE_ppa003920mg [Prunus pe... 89 5e-16
gb|EEE68919.1| hypothetical protein OsJ_27783 [Oryza sativa Japo... 89 5e-16
gb|EEC83802.1| hypothetical protein OsI_29727 [Oryza sativa Indi... 89 5e-16
ref|XP_004959846.1| PREDICTED: pentatricopeptide repeat-containi... 89 8e-16
ref|XP_006658856.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
ref|XP_002271313.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
ref|XP_004298437.1| PREDICTED: pentatricopeptide repeat-containi... 86 4e-15
gb|EMT26224.1| hypothetical protein F775_05781 [Aegilops tauschii] 86 5e-15
ref|XP_003593920.1| Pentatricopeptide repeat-containing protein ... 86 5e-15
ref|XP_006290820.1| hypothetical protein CARUB_v10016929mg [Caps... 82 6e-14
ref|XP_003559925.1| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
ref|XP_004143729.1| PREDICTED: pentatricopeptide repeat-containi... 80 2e-13
ref|XP_002890625.1| pentatricopeptide repeat-containing protein ... 80 4e-13
ref|NP_174012.1| pentatricopeptide repeat-containing protein [Ar... 79 5e-13
ref|XP_004228842.1| PREDICTED: pentatricopeptide repeat-containi... 79 6e-13
tpg|DAA63730.1| TPA: hypothetical protein ZEAMMB73_596066 [Zea m... 79 6e-13
gb|EOY01970.1| Pentatricopeptide repeat (PPR) superfamily protei... 79 8e-13
ref|XP_002461069.1| hypothetical protein SORBIDRAFT_02g040130 [S... 78 1e-12
>ref|XP_002522400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538285|gb|EEF39892.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 476
Score = 95.9 bits (237), Expect = 5e-18
Identities = 46/108 (42%), Positives = 68/108 (62%)
Frame = +3
Query: 3 TLHAYCVKSSFDSNLNVATAIADMYAKSKRIDSAAKVFDAVKRKDLVLYNCXXXXXXXXX 182
T+HA C+K F SNLNV TA+ +MYAK+ RIDS ++FD + KD++L+NC
Sbjct: 250 TIHACCIKIGFCSNLNVVTALIEMYAKTGRIDSGRRIFDGIVEKDVILWNCMIDKYAKVG 309
Query: 183 XXXXXXXXVAKMKDEGIKPASSTFAGLLEACASSGALMVGRRIHERIE 326
+ MK EG++ SS+ AGLL ACA+SG++ +G R+ + +E
Sbjct: 310 LLEQAIALLQLMKLEGVRANSSSLAGLLAACAASGSIKLGWRLSDYVE 357
>ref|XP_004486021.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g26900, mitochondrial-like [Cicer arietinum]
Length = 580
Score = 90.5 bits (223), Expect = 2e-16
Identities = 48/108 (44%), Positives = 64/108 (59%)
Frame = +3
Query: 3 TLHAYCVKSSFDSNLNVATAIADMYAKSKRIDSAAKVFDAVKRKDLVLYNCXXXXXXXXX 182
+LH YC++ F SNLNV TA+ DMYAK+ I A KVFD ++ KD+VL+NC
Sbjct: 248 SLHGYCLRIGFCSNLNVVTALIDMYAKTGCIYLARKVFDGLEEKDVVLWNCLIGNYAKNS 307
Query: 183 XXXXXXXXVAKMKDEGIKPASSTFAGLLEACASSGALMVGRRIHERIE 326
+ KM+ EG+KP SSTF GLL +SG++ V R + IE
Sbjct: 308 LVEDAVVLLQKMRHEGVKPNSSTFVGLLSDWPASGSMQVVRYVISLIE 355
>gb|EMJ23502.1| hypothetical protein PRUPE_ppa003920mg [Prunus persica]
Length = 540
Score = 89.4 bits (220), Expect = 5e-16
Identities = 46/108 (42%), Positives = 65/108 (60%)
Frame = +3
Query: 3 TLHAYCVKSSFDSNLNVATAIADMYAKSKRIDSAAKVFDAVKRKDLVLYNCXXXXXXXXX 182
+LH YC+K F S+L+V TA+ D YAK+ +ID ++FD V KD+VL+NC
Sbjct: 197 SLHGYCIKIGFCSDLHVLTALIDTYAKNGQIDLGRRIFDGVAVKDVVLWNCLVDKYAKCG 256
Query: 183 XXXXXXXXVAKMKDEGIKPASSTFAGLLEACASSGALMVGRRIHERIE 326
+ MK E +KP SST AGLL ACA+SG++ +G I + +E
Sbjct: 257 LVQDAVALLRLMKLERMKPNSSTLAGLLSACAASGSVSIGSCIKDYVE 304
>gb|EEE68919.1| hypothetical protein OsJ_27783 [Oryza sativa Japonica Group]
Length = 604
Score = 89.4 bits (220), Expect = 5e-16
Identities = 40/104 (38%), Positives = 60/104 (57%)
Frame = +3
Query: 6 LHAYCVKSSFDSNLNVATAIADMYAKSKRIDSAAKVFDAVKRKDLVLYNCXXXXXXXXXX 185
+H +C+K F + VA+A+ MY + K ++ KVFD ++DLVLYNC
Sbjct: 234 VHGFCIKVGFCRDAKVASAMVGMYVREKSVECGRKVFDEATKRDLVLYNCMVDGYAEAGQ 293
Query: 186 XXXXXXXVAKMKDEGIKPASSTFAGLLEACASSGALMVGRRIHE 317
V +M+ EG++P+S T G+L AC +SGA+ GRR+HE
Sbjct: 294 VEEAMGLVDRMRLEGVRPSSGTLVGVLSACGASGAMAAGRRLHE 337
>gb|EEC83802.1| hypothetical protein OsI_29727 [Oryza sativa Indica Group]
Length = 605
Score = 89.4 bits (220), Expect = 5e-16
Identities = 40/104 (38%), Positives = 60/104 (57%)
Frame = +3
Query: 6 LHAYCVKSSFDSNLNVATAIADMYAKSKRIDSAAKVFDAVKRKDLVLYNCXXXXXXXXXX 185
+H +C+K F + VA+A+ MY + K ++ KVFD ++DLVLYNC
Sbjct: 234 VHGFCIKVGFCRDAKVASAMVGMYVREKSVECGRKVFDEATKRDLVLYNCMVDGYAEAGQ 293
Query: 186 XXXXXXXVAKMKDEGIKPASSTFAGLLEACASSGALMVGRRIHE 317
V +M+ EG++P+S T G+L AC +SGA+ GRR+HE
Sbjct: 294 VEEAMGLVDRMRLEGVRPSSGTLVGVLSACGASGAMAAGRRLHE 337
>ref|XP_004959846.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
mitochondrial-like [Setaria italica]
Length = 553
Score = 88.6 bits (218), Expect = 8e-16
Identities = 42/105 (40%), Positives = 59/105 (56%)
Frame = +3
Query: 3 TLHAYCVKSSFDSNLNVATAIADMYAKSKRIDSAAKVFDAVKRKDLVLYNCXXXXXXXXX 182
++H +CVK+ S++ VA AI MY + +D A KVF R+DLVLYNC
Sbjct: 224 SVHGFCVKAGLCSDVKVAAAIVRMYVREGSVDCAGKVFQETTRRDLVLYNCMVDGYAKAG 283
Query: 183 XXXXXXXXVAKMKDEGIKPASSTFAGLLEACASSGALMVGRRIHE 317
V +M+ G++P+S T G+L AC +SGAL G R+HE
Sbjct: 284 RIHDAMDLVERMRQSGMRPSSGTLVGVLSACGASGALPAGCRVHE 328
>ref|XP_006658856.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
mitochondrial-like [Oryza brachyantha]
Length = 394
Score = 87.0 bits (214), Expect = 2e-15
Identities = 40/105 (38%), Positives = 58/105 (55%)
Frame = +3
Query: 3 TLHAYCVKSSFDSNLNVATAIADMYAKSKRIDSAAKVFDAVKRKDLVLYNCXXXXXXXXX 182
TLH +C K F N VA A+ MY + A KVF+ V ++D +LYNC
Sbjct: 66 TLHGFCFKVGFCINAKVAAAMVRMYVRDNSFVCARKVFNEVTKRDTILYNCMVDGYAKAG 125
Query: 183 XXXXXXXXVAKMKDEGIKPASSTFAGLLEACASSGALMVGRRIHE 317
V +M+ EG++P+S T G+L AC +SGA+ +GRR+H+
Sbjct: 126 QFEEAMDLVDRMRQEGVRPSSGTLVGVLSACGASGAISIGRRLHD 170
>ref|XP_002271313.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
mitochondrial-like [Vitis vinifera]
Length = 597
Score = 87.0 bits (214), Expect = 2e-15
Identities = 47/108 (43%), Positives = 62/108 (57%)
Frame = +3
Query: 3 TLHAYCVKSSFDSNLNVATAIADMYAKSKRIDSAAKVFDAVKRKDLVLYNCXXXXXXXXX 182
+LH +C+K F S+LNVATA+ DMYA + ID K+F V +KD+VL+NC
Sbjct: 250 SLHGHCIKVGFCSDLNVATALIDMYANAGFIDLGHKIFYQVPKKDVVLWNCLIDGYAKSD 309
Query: 183 XXXXXXXXVAKMKDEGIKPASSTFAGLLEACASSGALMVGRRIHERIE 326
+ MK E +KP SST GLL ACA++GA VG I +E
Sbjct: 310 LLQESLSLLQLMKREQVKPNSSTLVGLLSACAAAGASSVGLCISNYVE 357
>ref|XP_004298437.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 571
Score = 86.3 bits (212), Expect = 4e-15
Identities = 44/108 (40%), Positives = 64/108 (59%)
Frame = +3
Query: 3 TLHAYCVKSSFDSNLNVATAIADMYAKSKRIDSAAKVFDAVKRKDLVLYNCXXXXXXXXX 182
++H YC+K F +L+V TA+ D+YAK+ I+ A ++FD V KD+VL+NC
Sbjct: 239 SVHGYCIKMGFCDSLHVVTALIDVYAKNGEIELARRIFDGVAVKDVVLWNCLVDKYAKCG 298
Query: 183 XXXXXXXXVAKMKDEGIKPASSTFAGLLEACASSGALMVGRRIHERIE 326
+ M+ E KP SST AGLL ACA+SG+ +GR I + +E
Sbjct: 299 MVEEAVALLRLMRLERTKPNSSTLAGLLSACAASGSPSIGRFIMDYVE 346
>gb|EMT26224.1| hypothetical protein F775_05781 [Aegilops tauschii]
Length = 398
Score = 85.9 bits (211), Expect = 5e-15
Identities = 42/105 (40%), Positives = 60/105 (57%)
Frame = +3
Query: 3 TLHAYCVKSSFDSNLNVATAIADMYAKSKRIDSAAKVFDAVKRKDLVLYNCXXXXXXXXX 182
++H + VK+ F ++ VA A+ MY + I A KVF+ R+DLVLYNC
Sbjct: 66 SVHGFSVKTGFCKDVKVAAAMEGMYFRKGEIGCAKKVFEEATRRDLVLYNCMVDSCAKAR 125
Query: 183 XXXXXXXXVAKMKDEGIKPASSTFAGLLEACASSGALMVGRRIHE 317
V +M+ EG+KP + T G+L AC +SGA++ GRRIHE
Sbjct: 126 RIEEAMGLVDRMRQEGLKPNTGTLVGVLSACGASGAIVPGRRIHE 170
>ref|XP_003593920.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482968|gb|AES64171.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 801
Score = 85.9 bits (211), Expect = 5e-15
Identities = 46/108 (42%), Positives = 60/108 (55%)
Frame = +3
Query: 3 TLHAYCVKSSFDSNLNVATAIADMYAKSKRIDSAAKVFDAVKRKDLVLYNCXXXXXXXXX 182
+LH YC+K F NLNV TA+ DMYAK+ I A KVFD V KD+VL+NC
Sbjct: 232 SLHGYCIKIGFCCNLNVVTALIDMYAKTGCIYLARKVFDGVVEKDVVLWNCLIKNYARSC 291
Query: 183 XXXXXXXXVAKMKDEGIKPASSTFAGLLEACASSGALMVGRRIHERIE 326
+ M+ EG+KP SST GLL ++SG++ R + IE
Sbjct: 292 LVEEAVALLQSMRQEGVKPNSSTLVGLLSVYSASGSMQGVRYVTSLIE 339
>ref|XP_006290820.1| hypothetical protein CARUB_v10016929mg [Capsella rubella]
gi|482559527|gb|EOA23718.1| hypothetical protein
CARUB_v10016929mg [Capsella rubella]
Length = 575
Score = 82.4 bits (202), Expect = 6e-14
Identities = 41/106 (38%), Positives = 59/106 (55%)
Frame = +3
Query: 9 HAYCVKSSFDSNLNVATAIADMYAKSKRIDSAAKVFDAVKRKDLVLYNCXXXXXXXXXXX 188
H C+K DS+L++ TA+ MYAK I SA ++FD RKD+V +NC
Sbjct: 250 HGLCMKIGLDSDLHIVTALVGMYAKIGEISSARRIFDCAIRKDVVTWNCMIDQYAKMGLL 309
Query: 189 XXXXXXVAKMKDEGIKPASSTFAGLLEACASSGALMVGRRIHERIE 326
+ +MK E +KP SSTF GLL +CA + A +GR + + +E
Sbjct: 310 EECLWLLRQMKYERMKPNSSTFVGLLSSCAKNEAAWIGRSVGKLVE 355
>ref|XP_003559925.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
mitochondrial-like [Brachypodium distachyon]
Length = 560
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/105 (36%), Positives = 59/105 (56%)
Frame = +3
Query: 3 TLHAYCVKSSFDSNLNVATAIADMYAKSKRIDSAAKVFDAVKRKDLVLYNCXXXXXXXXX 182
+LH +C+K+ +++ VATA+ MY + A K+FD V R+D+VLYNC
Sbjct: 232 SLHGFCIKTGLFTDVKVATALQGMYFRKVGTGCAKKIFDEVMRRDVVLYNCMVDNCAKGG 291
Query: 183 XXXXXXXXVAKMKDEGIKPASSTFAGLLEACASSGALMVGRRIHE 317
V +M+ EG++P + T +L AC +SGA+ G RIH+
Sbjct: 292 KVEEAMGLVDRMRQEGVRPNTGTLVTVLSACGTSGAIAAGCRIHD 336
>ref|XP_004143729.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 80.5 bits (197), Expect = 2e-13
Identities = 39/101 (38%), Positives = 57/101 (56%)
Frame = +3
Query: 3 TLHAYCVKSSFDSNLNVATAIADMYAKSKRIDSAAKVFDAVKRKDLVLYNCXXXXXXXXX 182
+L+ +C+K SNL V T + DMY K +D A +F+ V KD++++NC
Sbjct: 247 SLYGHCIKLGLGSNLRVVTCLIDMYGKFGDLDEAGTIFNEVAEKDVIVWNCLIDNYAKNG 306
Query: 183 XXXXXXXXVAKMKDEGIKPASSTFAGLLEACASSGALMVGR 305
+ MK EG+KP SST AGL+ ACA+SGA+ G+
Sbjct: 307 LIKKAVASLHLMKLEGMKPNSSTLAGLISACATSGAVSTGK 347
>ref|XP_002890625.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297336467|gb|EFH66884.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 568
Score = 79.7 bits (195), Expect = 4e-13
Identities = 41/106 (38%), Positives = 59/106 (55%)
Frame = +3
Query: 9 HAYCVKSSFDSNLNVATAIADMYAKSKRIDSAAKVFDAVKRKDLVLYNCXXXXXXXXXXX 188
H C+K F+ +L++ TA+ MY K I SA ++FD RKD+V +NC
Sbjct: 246 HGLCIKIGFNLDLHLITALIGMYGKIGDIGSARRIFDCAIRKDVVTWNCMIDQYAKMGIL 305
Query: 189 XXXXXXVAKMKDEGIKPASSTFAGLLEACASSGALMVGRRIHERIE 326
+ +MK E +KP SSTF GLL +CA+S A VGR + + +E
Sbjct: 306 EECVWLLRQMKYERMKPNSSTFVGLLSSCANSEAAFVGRSVADLVE 351
>ref|NP_174012.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216976|sp|Q9ZVG8.1|PPR60_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g26900, mitochondrial; Flags: Precursor
gi|4262179|gb|AAD14496.1| Hypothetical protein
[Arabidopsis thaliana] gi|332192635|gb|AEE30756.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 572
Score = 79.3 bits (194), Expect = 5e-13
Identities = 41/106 (38%), Positives = 58/106 (54%)
Frame = +3
Query: 9 HAYCVKSSFDSNLNVATAIADMYAKSKRIDSAAKVFDAVKRKDLVLYNCXXXXXXXXXXX 188
H C+K D +L++ TA+ MY K+ I SA ++FD RKD+V +NC
Sbjct: 250 HVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLL 309
Query: 189 XXXXXXVAKMKDEGIKPASSTFAGLLEACASSGALMVGRRIHERIE 326
+ +MK E +KP SSTF GLL +CA S A VGR + + +E
Sbjct: 310 EECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLE 355
>ref|XP_004228842.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
mitochondrial-like [Solanum lycopersicum]
Length = 544
Score = 79.0 bits (193), Expect = 6e-13
Identities = 42/108 (38%), Positives = 56/108 (51%)
Frame = +3
Query: 3 TLHAYCVKSSFDSNLNVATAIADMYAKSKRIDSAAKVFDAVKRKDLVLYNCXXXXXXXXX 182
+LH YC+K F +L V TA MY K + S +FD +KD+VL+NC
Sbjct: 196 SLHGYCIKIGFCDSLKVLTAFISMYGKIGCVSSGRSLFDEASQKDVVLWNCLIDGYAKNG 255
Query: 183 XXXXXXXXVAKMKDEGIKPASSTFAGLLEACASSGALMVGRRIHERIE 326
+ +MK + +KP SST A LL CASSGAL +G I +E
Sbjct: 256 LLQEALSLLREMKVQRLKPNSSTLASLLSFCASSGALNMGEYIQNFVE 303
>tpg|DAA63730.1| TPA: hypothetical protein ZEAMMB73_596066 [Zea mays]
Length = 552
Score = 79.0 bits (193), Expect = 6e-13
Identities = 38/108 (35%), Positives = 57/108 (52%)
Frame = +3
Query: 3 TLHAYCVKSSFDSNLNVATAIADMYAKSKRIDSAAKVFDAVKRKDLVLYNCXXXXXXXXX 182
++H +C K+ ++ VA A+ MY + I+ A+KVF R+DLVL NC
Sbjct: 224 SVHGFCAKAGLCDDVKVAAAMVRMYVREGSIECASKVFHETARRDLVLCNCMADGYAKAG 283
Query: 183 XXXXXXXXVAKMKDEGIKPASSTFAGLLEACASSGALMVGRRIHERIE 326
+ M+ G++P+S T G+L AC +SGAL GR +HE E
Sbjct: 284 QIQEAMDLIGGMRQLGMRPSSGTLVGVLSACGASGALAAGRSVHELAE 331
>gb|EOY01970.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 592
Score = 78.6 bits (192), Expect = 8e-13
Identities = 41/108 (37%), Positives = 60/108 (55%)
Frame = +3
Query: 3 TLHAYCVKSSFDSNLNVATAIADMYAKSKRIDSAAKVFDAVKRKDLVLYNCXXXXXXXXX 182
+LH +C+K F + N+ +A+ DMYAK+ + S +VFD V KD+VL+NC
Sbjct: 246 SLHGHCLKVGFCFDSNLVSALIDMYAKTGNVYSGRRVFDEVAVKDVVLWNCMISKYAENG 305
Query: 183 XXXXXXXXVAKMKDEGIKPASSTFAGLLEACASSGALMVGRRIHERIE 326
+ MK + +KP S+T GLL ACA+SGA +G I +E
Sbjct: 306 LLEESLALLRLMKVKQVKPNSATLVGLLSACAASGATSLGESIGSYVE 353
>ref|XP_002461069.1| hypothetical protein SORBIDRAFT_02g040130 [Sorghum bicolor]
gi|241924446|gb|EER97590.1| hypothetical protein
SORBIDRAFT_02g040130 [Sorghum bicolor]
Length = 552
Score = 77.8 bits (190), Expect = 1e-12
Identities = 37/108 (34%), Positives = 56/108 (51%)
Frame = +3
Query: 3 TLHAYCVKSSFDSNLNVATAIADMYAKSKRIDSAAKVFDAVKRKDLVLYNCXXXXXXXXX 182
++H CVK+ ++ +A A+ MY + ++ A KVF R+DLVL NC
Sbjct: 224 SVHGLCVKTGLCDDVKIAAAMVGMYVREGSVECANKVFHETTRRDLVLCNCMVDGYAKAG 283
Query: 183 XXXXXXXXVAKMKDEGIKPASSTFAGLLEACASSGALMVGRRIHERIE 326
+ M+ G++P+S T G+L AC +SGAL GR +HE E
Sbjct: 284 QIREAIDLIDGMRQHGMRPSSGTLVGVLSACGTSGALAAGRSVHELAE 331