BLASTX nr result
ID: Zingiber25_contig00041877
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00041877
(420 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004951868.1| PREDICTED: pentatricopeptide repeat-containi... 98 1e-18
ref|XP_003570973.1| PREDICTED: pentatricopeptide repeat-containi... 98 1e-18
ref|XP_006648344.1| PREDICTED: pentatricopeptide repeat-containi... 95 1e-17
ref|NP_001183615.1| uncharacterized protein LOC100502209 [Zea ma... 95 1e-17
ref|NP_001132129.1| uncharacterized protein LOC100193546 [Zea ma... 95 1e-17
gb|EMS56030.1| hypothetical protein TRIUR3_35165 [Triticum urartu] 93 3e-17
ref|NP_001045991.1| Os02g0164600 [Oryza sativa Japonica Group] g... 90 4e-16
ref|XP_006490046.1| PREDICTED: putative pentatricopeptide repeat... 84 1e-14
ref|XP_006421479.1| hypothetical protein CICLE_v10006760mg [Citr... 82 6e-14
ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat... 80 2e-13
emb|CBI29893.3| unnamed protein product [Vitis vinifera] 80 2e-13
ref|XP_004497943.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 79 6e-13
ref|XP_003519723.2| PREDICTED: pentatricopeptide repeat-containi... 79 8e-13
ref|XP_004496036.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. l... 78 1e-12
gb|EOY29048.1| Tetratricopeptide repeat-like superfamily protein... 77 2e-12
ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258... 77 2e-12
emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera] 77 2e-12
gb|EOY09401.1| Pentatricopeptide repeat superfamily protein [The... 77 3e-12
ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containi... 77 3e-12
>ref|XP_004951868.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Setaria italica]
Length = 473
Score = 98.2 bits (243), Expect = 1e-18
Identities = 52/87 (59%), Positives = 60/87 (68%), Gaps = 2/87 (2%)
Frame = -2
Query: 419 EFVSRMPVRPTLAILGALLSACRVQNNLELGELVAMKIKELYQYKGGANVLLSNIYADQQ 240
EFVS MP P L ILGALLSAC + N LE+GELV KI+ + YKGGA VLLSN+YA+Q
Sbjct: 378 EFVSTMPFEPNLEILGALLSACSINNELEIGELVLNKIESVCSYKGGAGVLLSNMYANQN 437
Query: 239 QWQEVVSTREVARKE--AEKPPAQSWI 165
WQEV + R + E A KPP QS I
Sbjct: 438 LWQEVDTIRRKIKTEAIARKPPGQSLI 464
>ref|XP_003570973.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Brachypodium distachyon]
Length = 472
Score = 98.2 bits (243), Expect = 1e-18
Identities = 51/87 (58%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Frame = -2
Query: 419 EFVSRMPVRPTLAILGALLSACRVQNNLELGELVAMKIKELYQYKGGANVLLSNIYADQQ 240
+ + MP P LAILGALLSAC + N LE+GELV KI+ + YKGGANVLLSNIYA+Q
Sbjct: 380 QLIDSMPFDPNLAILGALLSACSINNELEIGELVLKKIESVCSYKGGANVLLSNIYANQN 439
Query: 239 QWQEVVSTREVARKEA--EKPPAQSWI 165
W EV S R R EA KPP QS +
Sbjct: 440 LWHEVDSLRRKIRNEATFRKPPGQSLV 466
>ref|XP_006648344.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like, partial [Oryza brachyantha]
Length = 473
Score = 94.7 bits (234), Expect = 1e-17
Identities = 49/87 (56%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Frame = -2
Query: 419 EFVSRMPVRPTLAILGALLSACRVQNNLELGELVAMKIKELYQYKGGANVLLSNIYADQQ 240
+F+ MP P LAILGALLSAC + N L+LGELV KI+ + YKGG +VLLSNIYA+Q
Sbjct: 378 QFIESMPFEPNLAILGALLSACSINNELDLGELVIKKIESVCSYKGGTSVLLSNIYANQN 437
Query: 239 QWQEVVSTREVARKE--AEKPPAQSWI 165
W EV S R R + KPP QS I
Sbjct: 438 LWHEVDSLRRKIRNDTICRKPPGQSVI 464
>ref|NP_001183615.1| uncharacterized protein LOC100502209 [Zea mays]
gi|238013452|gb|ACR37761.1| unknown [Zea mays]
gi|413926458|gb|AFW66390.1| hypothetical protein
ZEAMMB73_680096 [Zea mays] gi|413926459|gb|AFW66391.1|
hypothetical protein ZEAMMB73_680096 [Zea mays]
Length = 162
Score = 94.7 bits (234), Expect = 1e-17
Identities = 51/87 (58%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Frame = -2
Query: 419 EFVSRMPVRPTLAILGALLSACRVQNNLELGELVAMKIKELYQYKGGANVLLSNIYADQQ 240
EF+S MP P L ILGALLSAC + N LE+GELV KI + YKGGA VLLSNIYA+Q
Sbjct: 67 EFISMMPFEPNLEILGALLSACSINNELEIGELVLNKIDMVCSYKGGAGVLLSNIYANQN 126
Query: 239 QWQEVVSTREVARKEA--EKPPAQSWI 165
W EV + R R EA KPP S I
Sbjct: 127 LWHEVDTIRRKIRTEAIVRKPPGHSLI 153
>ref|NP_001132129.1| uncharacterized protein LOC100193546 [Zea mays]
gi|194693506|gb|ACF80837.1| unknown [Zea mays]
gi|413926460|gb|AFW66392.1| hypothetical protein
ZEAMMB73_680096 [Zea mays]
Length = 473
Score = 94.7 bits (234), Expect = 1e-17
Identities = 51/87 (58%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Frame = -2
Query: 419 EFVSRMPVRPTLAILGALLSACRVQNNLELGELVAMKIKELYQYKGGANVLLSNIYADQQ 240
EF+S MP P L ILGALLSAC + N LE+GELV KI + YKGGA VLLSNIYA+Q
Sbjct: 378 EFISMMPFEPNLEILGALLSACSINNELEIGELVLNKIDMVCSYKGGAGVLLSNIYANQN 437
Query: 239 QWQEVVSTREVARKEA--EKPPAQSWI 165
W EV + R R EA KPP S I
Sbjct: 438 LWHEVDTIRRKIRTEAIVRKPPGHSLI 464
>gb|EMS56030.1| hypothetical protein TRIUR3_35165 [Triticum urartu]
Length = 441
Score = 93.2 bits (230), Expect = 3e-17
Identities = 50/85 (58%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Frame = -2
Query: 419 EFVSRMPVRPTLAILGALLSACRVQNNLELGELVAMKIKELYQYKGGANVLLSNIYADQQ 240
E + MP P LAILGALLSAC V N LE+GELV KI + YKGGA VLLSNIYA+Q
Sbjct: 346 ELIDSMPFEPNLAILGALLSACSVNNELEIGELVLQKIDSVCSYKGGAGVLLSNIYANQN 405
Query: 239 QWQEVVSTREVARKEA--EKPPAQS 171
W EV S R R KPP QS
Sbjct: 406 LWHEVDSIRRKIRNGTIPRKPPGQS 430
>ref|NP_001045991.1| Os02g0164600 [Oryza sativa Japonica Group]
gi|49388051|dbj|BAD25165.1| putative pentatricopeptide
(PPR) repeat-containing protein [Oryza sativa Japonica
Group] gi|49388408|dbj|BAD25541.1| putative
pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group] gi|113535522|dbj|BAF07905.1|
Os02g0164600 [Oryza sativa Japonica Group]
gi|125538213|gb|EAY84608.1| hypothetical protein
OsI_05976 [Oryza sativa Indica Group]
gi|125580926|gb|EAZ21857.1| hypothetical protein
OsJ_05503 [Oryza sativa Japonica Group]
gi|215737275|dbj|BAG96204.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 476
Score = 89.7 bits (221), Expect = 4e-16
Identities = 47/87 (54%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Frame = -2
Query: 419 EFVSRMPVRPTLAILGALLSACRVQNNLELGELVAMKIKELYQYKGGANVLLSNIYADQQ 240
+F+ MP P LAILGALLSAC + N L++GELV +I+ + KGGA VLLSNIYA+Q
Sbjct: 381 QFIESMPFEPNLAILGALLSACSINNELDIGELVIKRIESVRSDKGGAGVLLSNIYANQN 440
Query: 239 QWQEVVSTREVARKE--AEKPPAQSWI 165
W EV S R R + KPP QS I
Sbjct: 441 LWHEVDSLRRKIRDDTICRKPPGQSVI 467
>ref|XP_006490046.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Citrus sinensis]
Length = 644
Score = 84.3 bits (207), Expect = 1e-14
Identities = 38/92 (41%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Frame = -2
Query: 419 EFVSRMPVRPTLAILGALLSACRVQNNLELGELVAMKIKELYQYKGGANVLLSNIYADQQ 240
EF+ +MP PT AILG+LL ACRV +N+++GE V ++ E+ G V+LSN+YA
Sbjct: 430 EFIKKMPFEPTAAILGSLLGACRVHSNVDIGEFVGQRLMEIEPENAGNYVILSNLYASAG 489
Query: 239 QWQEVVSTREVARKEA-EKPPAQSWI*INRCI 147
+W++V RE+ +++A K P +SWI +++ +
Sbjct: 490 RWEDVTRVRELMKEKAVTKDPGRSWIELDQIL 521
>ref|XP_006421479.1| hypothetical protein CICLE_v10006760mg [Citrus clementina]
gi|557523352|gb|ESR34719.1| hypothetical protein
CICLE_v10006760mg [Citrus clementina]
Length = 688
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/92 (41%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Frame = -2
Query: 419 EFVSRMPVRPTLAILGALLSACRVQNNLELGELVAMKIKELYQYKGGANVLLSNIYADQQ 240
EF+ MP PT AILG+LL ACRV N+++GE V ++ E+ G V+LSN+YA
Sbjct: 372 EFIKNMPFEPTAAILGSLLGACRVHYNVDIGEFVGQRLMEIEPENAGNYVILSNLYASAG 431
Query: 239 QWQEVVSTREVARKEA-EKPPAQSWI*INRCI 147
+W++V RE+ +++A K P +SWI +++ +
Sbjct: 432 RWEDVTRVRELMKEKAVTKDPGRSWIELDQIL 463
>ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/92 (41%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Frame = -2
Query: 419 EFVSRMPVRPTLAILGALLSACRVQNNLELGELVAMKIKELYQYKGGANVLLSNIYADQQ 240
EF+ +MP PT AI G+LL ACRV N+ +GE VA ++ E+ G V+LSN+YA
Sbjct: 839 EFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAG 898
Query: 239 QWQEVVSTREVARKEAE-KPPAQSWI*INRCI 147
+W +V + RE+ +++A K P +SWI +++ +
Sbjct: 899 RWDDVRTVRELMKEKAVIKEPGRSWIELDQTL 930
>emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/92 (41%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Frame = -2
Query: 419 EFVSRMPVRPTLAILGALLSACRVQNNLELGELVAMKIKELYQYKGGANVLLSNIYADQQ 240
EF+ +MP PT AI G+LL ACRV N+ +GE VA ++ E+ G V+LSN+YA
Sbjct: 372 EFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAG 431
Query: 239 QWQEVVSTREVARKEAE-KPPAQSWI*INRCI 147
+W +V + RE+ +++A K P +SWI +++ +
Sbjct: 432 RWDDVRTVRELMKEKAVIKEPGRSWIELDQTL 463
>ref|XP_004497943.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g13770, mitochondrial-like
[Cicer arietinum]
Length = 642
Score = 79.0 bits (193), Expect = 6e-13
Identities = 37/92 (40%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Frame = -2
Query: 419 EFVSRMPVRPTLAILGALLSACRVQNNLELGELVAMKIKELYQYKGGANVLLSNIYADQQ 240
EF+ +MP PT AI G+LL ACRV +N+++GE V ++ E+ G V+LSN+YA
Sbjct: 428 EFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFVGHRLLEIEPANAGNYVILSNLYASAG 487
Query: 239 QWQEVVSTRE-VARKEAEKPPAQSWI*INRCI 147
+W++V S R+ + RK K P +SW+ +++ +
Sbjct: 488 RWEDVRSLRDLMLRKTVMKEPGRSWMELDQVL 519
>ref|XP_003519723.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 754
Score = 78.6 bits (192), Expect = 8e-13
Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Frame = -2
Query: 419 EFVSRMPVRPTLAILGALLSACRVQNNLELGELVAMKIKELYQYKGGANVLLSNIYADQQ 240
+F++RMP+ P + G+LL ACR+ N +EL EL+A +I +L G VLLSN+YA +
Sbjct: 620 KFITRMPMTPDANVFGSLLGACRLHNKVELTELLAERILQLKADDSGHYVLLSNLYASGK 679
Query: 239 QWQEVVSTREVAR-KEAEKPPAQSWI*INRCI 147
+W+++ R + + K EK P SWI + CI
Sbjct: 680 RWEDMSKVRSMIKDKGLEKKPGSSWIQVGHCI 711
>ref|XP_004496036.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cicer arietinum]
Length = 736
Score = 78.2 bits (191), Expect = 1e-12
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Frame = -2
Query: 419 EFVSRMPVRPTLAILGALLSACRVQNNLELGELVAMKIKELYQYKGGANVLLSNIYADQQ 240
+F++RMPV P +LG+LL ACR+ N +EL EL+A I +L G VLLSN+YA +
Sbjct: 596 KFITRMPVIPDANVLGSLLGACRLHNKVELAELLAEHIFQLNIEDSGHYVLLSNLYASGK 655
Query: 239 QWQEVVSTREVAR-KEAEKPPAQSWI*INRCI 147
+W+++ R + + K EK P SWI + CI
Sbjct: 656 RWEDMSKVRSLIKDKGLEKKPGCSWIQVGHCI 687
>ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 637
Score = 77.8 bits (190), Expect = 1e-12
Identities = 39/86 (45%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = -2
Query: 419 EFVSRMPVRPTLAILGALLSACRVQNNLELGELVAMKIKELYQYKGGANVLLSNIYADQQ 240
E + +P PT +I G+LL++CRV NLEL E+ A K+ EL G +VLLSNIYA +
Sbjct: 423 ELIKSIPFEPTASIWGSLLASCRVCKNLELAEVAAKKLFELEPENAGNHVLLSNIYAANK 482
Query: 239 QWQEVVSTREVARK-EAEKPPAQSWI 165
QW+E+ +R++ R + +K QSWI
Sbjct: 483 QWEEIAKSRKLLRDCDVKKVRGQSWI 508
>gb|EOY29048.1| Tetratricopeptide repeat-like superfamily protein isoform 1
[Theobroma cacao] gi|508781793|gb|EOY29049.1|
Tetratricopeptide repeat-like superfamily protein
isoform 1 [Theobroma cacao] gi|508781794|gb|EOY29050.1|
Tetratricopeptide repeat-like superfamily protein
isoform 1 [Theobroma cacao]
Length = 675
Score = 77.4 bits (189), Expect = 2e-12
Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Frame = -2
Query: 416 FVSRMPVRPTLAILGALLSACRVQNNLELGELVAMKIKELYQYKGGANVLLSNIYADQQQ 237
F+ MP++PT A+ GALL ACR+ N+ELG A ++ EL + G VLLSNIYA +
Sbjct: 462 FIREMPIKPTAAVWGALLGACRMHKNMELGTYAAERVFELDPHDSGPLVLLSNIYASAGR 521
Query: 236 WQEVVSTREVARKE-AEKPPAQSWI*INRCI 147
W + R++ ++ +K PA SW+ I +
Sbjct: 522 WSDAAKVRKMMKESGVKKEPACSWVEIENTV 552
>ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 77.0 bits (188), Expect = 2e-12
Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Frame = -2
Query: 416 FVSRMPVRPTLAILGALLSACRVQNNLELGELVAMKIKELYQYKGGANVLLSNIYADQQQ 237
F+ MP+ PT A+ GALL ACR+ N+ELG A + EL + G +LLSNIYA +
Sbjct: 448 FIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGR 507
Query: 236 WQEVVSTREVARKE-AEKPPAQSWI*INRCI 147
W++V R++ ++ +K PA SW+ I +
Sbjct: 508 WRDVAKVRKMMKESGVKKQPACSWVEIENAV 538
>emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 77.0 bits (188), Expect = 2e-12
Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Frame = -2
Query: 416 FVSRMPVRPTLAILGALLSACRVQNNLELGELVAMKIKELYQYKGGANVLLSNIYADQQQ 237
F+ MP+ PT A+ GALL ACR+ N+ELG A + EL + G +LLSNIYA +
Sbjct: 448 FIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGR 507
Query: 236 WQEVVSTREVARKE-AEKPPAQSWI*INRCI 147
W++V R++ ++ +K PA SW+ I +
Sbjct: 508 WRDVAKVRKMMKESGVKKQPACSWVEIENAV 538
>gb|EOY09401.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 718
Score = 76.6 bits (187), Expect = 3e-12
Identities = 34/92 (36%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Frame = -2
Query: 419 EFVSRMPVRPTLAILGALLSACRVQNNLELGELVAMKIKELYQYKGGANVLLSNIYADQQ 240
EF+ +MP PT A+ G+LL ACRV +N+++GE V ++ E+ G V+LSN++A
Sbjct: 372 EFIKKMPFEPTAALWGSLLGACRVHSNIDIGEFVGRRLLEIEPENAGNYVILSNLFASAG 431
Query: 239 QWQEVVSTREVARKEA-EKPPAQSWI*INRCI 147
+W++V R++ ++A +K P +SWI +++ +
Sbjct: 432 RWEDVRMVRDLMMEKAVKKDPGRSWIELDQTL 463
>ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 76.6 bits (187), Expect = 3e-12
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = -2
Query: 416 FVSRMPVRPTLAILGALLSACRVQNNLELGELVAMKIKELYQYKGGANVLLSNIYADQQQ 237
F+ MP++P +++LGA+L AC++ N+ELGE A K+ +L +GG +VLL+NIYA
Sbjct: 606 FIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSM 665
Query: 236 WQEVVSTREVAR-KEAEKPPAQSWI 165
W +V R K K P SW+
Sbjct: 666 WDKVAKVRTAMEDKGLHKTPGCSWV 690