BLASTX nr result

ID: Zingiber25_contig00041867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00041867
         (581 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006827394.1| hypothetical protein AMTR_s00011p00186530 [A...    57   4e-06

>ref|XP_006827394.1| hypothetical protein AMTR_s00011p00186530 [Amborella trichopoda]
           gi|548831829|gb|ERM94631.1| hypothetical protein
           AMTR_s00011p00186530 [Amborella trichopoda]
          Length = 249

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
 Frame = -2

Query: 430 MDPVMAEKIAARRRYRPIGRMYTLLRCIEALATLILLSWSSVRLPAALKXXXXXXXXXXX 251
           MD + AEK +A  +Y+ I ++ T  R +E    L L SW S  LP A +           
Sbjct: 1   MDSIKAEKASAMTKYKRIQKIGTFFRFLEVFVVLALFSWFSSSLPIAARIAVSYFRYLCL 60

Query: 250 XLRGHRFVFFLGNAIVLTLLAL--XXXXXXXXXXXSDVYDQFL 128
                 FVF LGNAIV+TL+A               D+YD+F+
Sbjct: 61  VAVSPTFVFILGNAIVITLVAKSGHFGPRASSNSCPDIYDEFV 103


Top