BLASTX nr result
ID: Zingiber25_contig00041806
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00041806
(298 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006644884.1| PREDICTED: transcription factor GAMYB-like i... 59 5e-07
gb|AEX59326.1| MYB family transcription factor [Oryza sativa Ind... 58 2e-06
ref|NP_001130632.1| MYBGA transcription factor [Zea mays] gi|194... 58 2e-06
gb|ABZ04963.1| putative transcription factor GAMYB [Oryza rufipo... 58 2e-06
gb|ABZ04948.1| putative transcription factor GAMYB [Oryza sativa... 58 2e-06
sp|A2WW87.1|GAM1_ORYSI RecName: Full=Transcription factor GAMYB;... 58 2e-06
dbj|BAD68205.1| putative transcription factor GAMyb [Oryza sativ... 57 2e-06
ref|NP_001044592.1| Os01g0812000 [Oryza sativa Japonica Group] g... 57 2e-06
gb|AEX59332.1| MYB family transcription factor [Oryza nivara] 57 2e-06
gb|AEX59323.1| MYB family transcription factor [Oryza sativa Ind... 57 2e-06
gb|ABZ04975.1| putative transcription factor GAMYB [Oryza sativa... 57 2e-06
gb|ABZ04961.1| putative transcription factor GAMYB [Oryza rufipo... 57 2e-06
gb|ABZ04952.1| putative transcription factor GAMYB [Oryza rufipo... 57 2e-06
gb|ABZ04946.1| putative transcription factor GAMYB [Oryza sativa... 57 2e-06
emb|CAA67000.1| transcription factor GAMyb [Oryza sativa Indica ... 57 2e-06
ref|XP_002297703.2| hypothetical protein POPTR_0001s07330g [Popu... 57 3e-06
ref|XP_006368652.1| hypothetical protein POPTR_0001s07330g [Popu... 57 3e-06
gb|AEX59335.1| MYB family transcription factor [Oryza rufipogon]... 57 3e-06
ref|XP_002456516.1| hypothetical protein SORBIDRAFT_03g037680 [S... 57 3e-06
gb|ABZ04955.1| putative transcription factor GAMYB [Oryza sativa... 57 3e-06
>ref|XP_006644884.1| PREDICTED: transcription factor GAMYB-like isoform X1 [Oryza
brachyantha] gi|573914433|ref|XP_006644885.1| PREDICTED:
transcription factor GAMYB-like isoform X2 [Oryza
brachyantha]
Length = 553
Score = 59.3 bits (142), Expect = 5e-07
Identities = 28/57 (49%), Positives = 38/57 (66%)
Frame = -3
Query: 278 PCSSPLEATDTLGDSPSATISLQSECVSPRRSGLLEALVHEAQTISNTKKEPSIINN 108
P P E D SP+AT S++SECVSPR SGLLE L+HEAQT+ + K + + + +
Sbjct: 341 PALQPTELVDPYLQSPAATPSVKSECVSPRNSGLLEELIHEAQTLRSGKNQQTSVRS 397
>gb|AEX59326.1| MYB family transcription factor [Oryza sativa Indica Group]
gi|371930317|gb|AEX59333.1| MYB family transcription
factor [Oryza nivara]
Length = 162
Score = 57.8 bits (138), Expect = 2e-06
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -3
Query: 278 PCSSPLEATDTLGDSPSATISLQSECVSPRRSGLLEALVHEAQTISNTKKEPSII 114
P P E D SP+AT S++SEC SPR SGLLE LVHEAQT+ + K + + +
Sbjct: 77 PALQPTELVDPYLQSPAATPSVKSECASPRNSGLLEELVHEAQTLRSGKNQQTSV 131
>ref|NP_001130632.1| MYBGA transcription factor [Zea mays] gi|194689692|gb|ACF78930.1|
unknown [Zea mays] gi|195647072|gb|ACG43004.1|
transcription factor GAMYB [Zea mays]
gi|223946611|gb|ACN27389.1| unknown [Zea mays]
gi|223948883|gb|ACN28525.1| unknown [Zea mays]
gi|323388715|gb|ADX60162.1| MYBGA transcription factor
[Zea mays] gi|414880037|tpg|DAA57168.1| TPA: putative
MYB DNA-binding domain superfamily protein [Zea mays]
Length = 559
Score = 57.8 bits (138), Expect = 2e-06
Identities = 28/57 (49%), Positives = 36/57 (63%)
Frame = -3
Query: 278 PCSSPLEATDTLGDSPSATISLQSECVSPRRSGLLEALVHEAQTISNTKKEPSIINN 108
P P E D SPSAT S++SEC SPR SGLLE L+HEAQ + + K + S + +
Sbjct: 348 PAMQPTELVDPYLQSPSATPSVKSECASPRNSGLLEELLHEAQALRSGKNQQSSVRS 404
>gb|ABZ04963.1| putative transcription factor GAMYB [Oryza rufipogon]
Length = 259
Score = 57.8 bits (138), Expect = 2e-06
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -3
Query: 278 PCSSPLEATDTLGDSPSATISLQSECVSPRRSGLLEALVHEAQTISNTKKEPSII 114
P P E D SP+AT S++SEC SPR SGLLE LVHEAQT+ + K + + +
Sbjct: 174 PALQPTELVDPYLQSPAATPSVKSECASPRNSGLLEELVHEAQTLRSGKNQQTSV 228
>gb|ABZ04948.1| putative transcription factor GAMYB [Oryza sativa Indica Group]
gi|167018025|gb|ABZ04983.1| putative transcription
factor GAMYB [Oryza sativa Indica Group]
gi|167018027|gb|ABZ04984.1| putative transcription
factor GAMYB [Oryza rufipogon]
gi|167018029|gb|ABZ04985.1| putative transcription
factor GAMYB [Oryza sativa Indica Group]
Length = 259
Score = 57.8 bits (138), Expect = 2e-06
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -3
Query: 278 PCSSPLEATDTLGDSPSATISLQSECVSPRRSGLLEALVHEAQTISNTKKEPSII 114
P P E D SP+AT S++SEC SPR SGLLE LVHEAQT+ + K + + +
Sbjct: 174 PALQPTELVDPYLQSPAATPSVKSECASPRNSGLLEELVHEAQTLRSGKNQQTSV 228
>sp|A2WW87.1|GAM1_ORYSI RecName: Full=Transcription factor GAMYB; AltName: Full=OsGAMyb
gi|125528119|gb|EAY76233.1| hypothetical protein
OsI_04169 [Oryza sativa Indica Group]
Length = 553
Score = 57.8 bits (138), Expect = 2e-06
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -3
Query: 278 PCSSPLEATDTLGDSPSATISLQSECVSPRRSGLLEALVHEAQTISNTKKEPSII 114
P P E D SP+AT S++SEC SPR SGLLE LVHEAQT+ + K + + +
Sbjct: 341 PALQPTELVDPYLQSPAATPSVKSECASPRNSGLLEELVHEAQTLRSGKNQQTSV 395
>dbj|BAD68205.1| putative transcription factor GAMyb [Oryza sativa Japonica Group]
gi|215686678|dbj|BAG88931.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 474
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = -3
Query: 278 PCSSPLEATDTLGDSPSATISLQSECVSPRRSGLLEALVHEAQTISNTKKEPSII 114
P P E D SP+AT S++SEC SPR SGLLE L+HEAQT+ + K + + +
Sbjct: 341 PALQPTELVDPYLQSPAATPSVKSECASPRNSGLLEELIHEAQTLRSGKNQQTSV 395
>ref|NP_001044592.1| Os01g0812000 [Oryza sativa Japonica Group]
gi|122241089|sp|Q0JIC2.1|GAM1_ORYSJ RecName:
Full=Transcription factor GAMYB; AltName: Full=OsGAMyb
gi|18844771|dbj|BAB85242.1| transcription factor GAMyb
[Oryza sativa Japonica Group]
gi|113534123|dbj|BAF06506.1| Os01g0812000 [Oryza sativa
Japonica Group] gi|125572392|gb|EAZ13907.1| hypothetical
protein OsJ_03832 [Oryza sativa Japonica Group]
gi|215736813|dbj|BAG95742.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 553
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = -3
Query: 278 PCSSPLEATDTLGDSPSATISLQSECVSPRRSGLLEALVHEAQTISNTKKEPSII 114
P P E D SP+AT S++SEC SPR SGLLE L+HEAQT+ + K + + +
Sbjct: 341 PALQPTELVDPYLQSPAATPSVKSECASPRNSGLLEELIHEAQTLRSGKNQQTSV 395
>gb|AEX59332.1| MYB family transcription factor [Oryza nivara]
Length = 162
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = -3
Query: 278 PCSSPLEATDTLGDSPSATISLQSECVSPRRSGLLEALVHEAQTISNTKKEPSII 114
P P E D SP+AT S++SEC SPR SGLLE L+HEAQT+ + K + + +
Sbjct: 77 PALQPTELVDPYLQSPAATPSVKSECASPRNSGLLEELIHEAQTLRSGKNQQTSV 131
>gb|AEX59323.1| MYB family transcription factor [Oryza sativa Indica Group]
gi|371930299|gb|AEX59324.1| MYB family transcription
factor [Oryza sativa Indica Group]
gi|371930301|gb|AEX59325.1| MYB family transcription
factor [Oryza sativa Indica Group]
gi|371930305|gb|AEX59327.1| MYB family transcription
factor [Oryza sativa Indica Group]
gi|371930307|gb|AEX59328.1| MYB family transcription
factor [Oryza barthii] gi|371930309|gb|AEX59329.1| MYB
family transcription factor [Oryza nivara]
gi|371930311|gb|AEX59330.1| MYB family transcription
factor [Oryza nivara] gi|371930313|gb|AEX59331.1| MYB
family transcription factor [Oryza nivara]
gi|371930319|gb|AEX59334.1| MYB family transcription
factor [Oryza rufipogon] gi|371930323|gb|AEX59336.1| MYB
family transcription factor [Oryza rufipogon]
gi|371930325|gb|AEX59337.1| MYB family transcription
factor [Oryza rufipogon] gi|371930329|gb|AEX59339.1| MYB
family transcription factor [Oryza sativa Japonica
Group] gi|371930331|gb|AEX59340.1| MYB family
transcription factor [Oryza sativa Japonica Group]
gi|371930333|gb|AEX59341.1| MYB family transcription
factor [Oryza sativa Japonica Group]
gi|371930337|gb|AEX59343.1| MYB family transcription
factor [Oryza sativa Japonica Group]
gi|371930339|gb|AEX59344.1| MYB family transcription
factor [Oryza sativa Japonica Group]
gi|371930341|gb|AEX59345.1| MYB family transcription
factor [Oryza sativa Japonica Group]
gi|371930343|gb|AEX59346.1| MYB family transcription
factor [Oryza sativa Japonica Group]
gi|371930345|gb|AEX59347.1| MYB family transcription
factor [Oryza sativa Japonica Group]
Length = 162
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = -3
Query: 278 PCSSPLEATDTLGDSPSATISLQSECVSPRRSGLLEALVHEAQTISNTKKEPSII 114
P P E D SP+AT S++SEC SPR SGLLE L+HEAQT+ + K + + +
Sbjct: 77 PALQPTELVDPYLQSPAATPSVKSECASPRNSGLLEELIHEAQTLRSGKNQQTSV 131
>gb|ABZ04975.1| putative transcription factor GAMYB [Oryza sativa Indica Group]
Length = 250
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = -3
Query: 278 PCSSPLEATDTLGDSPSATISLQSECVSPRRSGLLEALVHEAQTISNTKKEPSII 114
P P E D SP+AT S++SEC SPR SGLLE L+HEAQT+ + K + + +
Sbjct: 165 PALQPTELVDPYLQSPAATPSVKSECASPRNSGLLEELIHEAQTLRSGKNQQTSV 219
>gb|ABZ04961.1| putative transcription factor GAMYB [Oryza rufipogon]
Length = 259
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = -3
Query: 278 PCSSPLEATDTLGDSPSATISLQSECVSPRRSGLLEALVHEAQTISNTKKEPSII 114
P P E D SP+AT S++SEC SPR SGLLE L+HEAQT+ + K + + +
Sbjct: 174 PALQPTELVDPYLQSPAATPSVKSECASPRNSGLLEELIHEAQTLRSGKNQQTSV 228
>gb|ABZ04952.1| putative transcription factor GAMYB [Oryza rufipogon]
Length = 259
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = -3
Query: 278 PCSSPLEATDTLGDSPSATISLQSECVSPRRSGLLEALVHEAQTISNTKKEPSII 114
P P E D SP+AT S++SEC SPR SGLLE L+HEAQT+ + K + + +
Sbjct: 174 PALQPTELVDPYLQSPAATPSVKSECASPRNSGLLEELIHEAQTLRSGKNQQTSV 228
>gb|ABZ04946.1| putative transcription factor GAMYB [Oryza sativa Indica Group]
gi|167017953|gb|ABZ04947.1| putative transcription
factor GAMYB [Oryza sativa Indica Group]
gi|167017957|gb|ABZ04949.1| putative transcription
factor GAMYB [Oryza sativa Japonica Group]
gi|167017959|gb|ABZ04950.1| putative transcription
factor GAMYB [Oryza rufipogon]
gi|167017961|gb|ABZ04951.1| putative transcription
factor GAMYB [Oryza rufipogon]
gi|167017965|gb|ABZ04953.1| putative transcription
factor GAMYB [Oryza sativa Japonica Group]
gi|167017967|gb|ABZ04954.1| putative transcription
factor GAMYB [Oryza sativa Japonica Group]
gi|167017971|gb|ABZ04956.1| putative transcription
factor GAMYB [Oryza rufipogon]
gi|167017973|gb|ABZ04957.1| putative transcription
factor GAMYB [Oryza rufipogon]
gi|167017975|gb|ABZ04958.1| putative transcription
factor GAMYB [Oryza rufipogon]
gi|167017977|gb|ABZ04959.1| putative transcription
factor GAMYB [Oryza rufipogon]
gi|167017979|gb|ABZ04960.1| putative transcription
factor GAMYB [Oryza sativa Japonica Group]
gi|167017983|gb|ABZ04962.1| putative transcription
factor GAMYB [Oryza sativa Indica Group]
gi|167017987|gb|ABZ04964.1| putative transcription
factor GAMYB [Oryza sativa Japonica Group]
gi|167017989|gb|ABZ04965.1| putative transcription
factor GAMYB [Oryza sativa Japonica Group]
gi|167017991|gb|ABZ04966.1| putative transcription
factor GAMYB [Oryza sativa Indica Group]
gi|167017993|gb|ABZ04967.1| putative transcription
factor GAMYB [Oryza sativa Japonica Group]
gi|167017995|gb|ABZ04968.1| putative transcription
factor GAMYB [Oryza sativa Japonica Group]
gi|167017999|gb|ABZ04970.1| putative transcription
factor GAMYB [Oryza sativa Japonica Group]
gi|167018001|gb|ABZ04971.1| putative transcription
factor GAMYB [Oryza sativa Indica Group]
gi|167018003|gb|ABZ04972.1| putative transcription
factor GAMYB [Oryza sativa Japonica Group]
gi|167018005|gb|ABZ04973.1| putative transcription
factor GAMYB [Oryza sativa Indica Group]
gi|167018007|gb|ABZ04974.1| putative transcription
factor GAMYB [Oryza sativa Indica Group]
gi|167018011|gb|ABZ04976.1| putative transcription
factor GAMYB [Oryza sativa Indica Group]
gi|167018013|gb|ABZ04977.1| putative transcription
factor GAMYB [Oryza sativa Indica Group]
gi|167018015|gb|ABZ04978.1| putative transcription
factor GAMYB [Oryza sativa Indica Group]
Length = 259
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = -3
Query: 278 PCSSPLEATDTLGDSPSATISLQSECVSPRRSGLLEALVHEAQTISNTKKEPSII 114
P P E D SP+AT S++SEC SPR SGLLE L+HEAQT+ + K + + +
Sbjct: 174 PALQPTELVDPYLQSPAATPSVKSECASPRNSGLLEELIHEAQTLRSGKNQQTSV 228
>emb|CAA67000.1| transcription factor GAMyb [Oryza sativa Indica Group]
Length = 553
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = -3
Query: 278 PCSSPLEATDTLGDSPSATISLQSECVSPRRSGLLEALVHEAQTISNTKKEPSII 114
P P E D SP+AT S++SEC SPR SGLLE L+HEAQT+ + K + + +
Sbjct: 341 PALQPTELVDPYLQSPAATPSVKSECASPRNSGLLEELIHEAQTLRSGKNQQTSV 395
>ref|XP_002297703.2| hypothetical protein POPTR_0001s07330g [Populus trichocarpa]
gi|550346730|gb|EEE82508.2| hypothetical protein
POPTR_0001s07330g [Populus trichocarpa]
Length = 558
Score = 57.0 bits (136), Expect = 3e-06
Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 10/100 (10%)
Frame = -3
Query: 284 WPPCSSP---LEATDTLGDSPSATISLQSECVSPRRSGLLEALVHEAQTISNTKKE---- 126
W P SP +E+ DT SP T +++S+C SPR SGLL+AL+HEA+T+S+ K +
Sbjct: 333 WGPSCSPSPLIESVDTFIQSPP-TGTVESDCPSPRNSGLLDALLHEAKTLSSAKNQLSDK 391
Query: 125 ---PSIINNVDAYDLESESVNETKLESQSNPSISSLSRSA 15
S + D D + ++ ET+ E +P IS L +A
Sbjct: 392 SSNSSTVTPGDDADSSALNICETEREDYGHP-ISPLGHTA 430
>ref|XP_006368652.1| hypothetical protein POPTR_0001s07330g [Populus trichocarpa]
gi|550346729|gb|ERP65221.1| hypothetical protein
POPTR_0001s07330g [Populus trichocarpa]
Length = 568
Score = 57.0 bits (136), Expect = 3e-06
Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 10/100 (10%)
Frame = -3
Query: 284 WPPCSSP---LEATDTLGDSPSATISLQSECVSPRRSGLLEALVHEAQTISNTKKE---- 126
W P SP +E+ DT SP T +++S+C SPR SGLL+AL+HEA+T+S+ K +
Sbjct: 333 WGPSCSPSPLIESVDTFIQSPP-TGTVESDCPSPRNSGLLDALLHEAKTLSSAKNQLSDK 391
Query: 125 ---PSIINNVDAYDLESESVNETKLESQSNPSISSLSRSA 15
S + D D + ++ ET+ E +P IS L +A
Sbjct: 392 SSNSSTVTPGDDADSSALNICETEREDYGHP-ISPLGHTA 430
>gb|AEX59335.1| MYB family transcription factor [Oryza rufipogon]
gi|371930327|gb|AEX59338.1| MYB family transcription
factor [Oryza rufipogon] gi|371930335|gb|AEX59342.1| MYB
family transcription factor [Oryza sativa Japonica
Group] gi|371930347|gb|AEX59348.1| MYB family
transcription factor [Oryza sativa Japonica Group]
Length = 162
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = -3
Query: 278 PCSSPLEATDTLGDSPSATISLQSECVSPRRSGLLEALVHEAQTISNTKKEPSII 114
P P E D SP+AT S++SEC SPR SGLLE L+HEAQT+ + K + + +
Sbjct: 77 PVLQPTELVDPYLQSPAATPSVKSECASPRNSGLLEELIHEAQTLRSGKNQQTSV 131
>ref|XP_002456516.1| hypothetical protein SORBIDRAFT_03g037680 [Sorghum bicolor]
gi|241928491|gb|EES01636.1| hypothetical protein
SORBIDRAFT_03g037680 [Sorghum bicolor]
Length = 556
Score = 57.0 bits (136), Expect = 3e-06
Identities = 29/55 (52%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = -3
Query: 278 PCSSPLEATDTLGDSPSATISLQSECVSPRRSGLLEALVHEAQTI-SNTKKEPSI 117
P P E D SPSAT S++SEC SPR SGLLE L+HEAQ + S ++PS+
Sbjct: 346 PAMQPTELVDPYLQSPSATPSVKSECASPRNSGLLEELLHEAQALRSGKNQQPSV 400
>gb|ABZ04955.1| putative transcription factor GAMYB [Oryza sativa Japonica Group]
gi|167017997|gb|ABZ04969.1| putative transcription
factor GAMYB [Oryza rufipogon]
gi|167018017|gb|ABZ04979.1| putative transcription
factor GAMYB [Oryza sativa Indica Group]
gi|167018019|gb|ABZ04980.1| putative transcription
factor GAMYB [Oryza rufipogon]
gi|167018021|gb|ABZ04981.1| putative transcription
factor GAMYB [Oryza rufipogon]
gi|167018023|gb|ABZ04982.1| putative transcription
factor GAMYB [Oryza sativa Japonica Group]
Length = 259
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = -3
Query: 278 PCSSPLEATDTLGDSPSATISLQSECVSPRRSGLLEALVHEAQTISNTKKEPSII 114
P P E D SP+AT S++SEC SPR SGLLE L+HEAQT+ + K + + +
Sbjct: 174 PVLQPTELVDPYLQSPAATPSVKSECASPRNSGLLEELIHEAQTLRSGKNQQTSV 228