BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00041788
         (461 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006346624.1| PREDICTED: pentatricopeptide repeat-containi...    93   3e-17
gb|EMT30724.1| Pentatricopeptide repeat-containing protein [Aegi...    90   3e-16
dbj|BAJ92058.1| predicted protein [Hordeum vulgare subsp. vulgare]     90   4e-16
dbj|BAJ95661.1| predicted protein [Hordeum vulgare subsp. vulgare]     90   4e-16
gb|EMJ13849.1| hypothetical protein PRUPE_ppa018206mg, partial [...    86   7e-15
ref|XP_002444669.1| hypothetical protein SORBIDRAFT_07g025740 [S...    86   7e-15
ref|XP_006585174.1| PREDICTED: pentatricopeptide repeat-containi...    85   9e-15
ref|NP_001062373.1| Os08g0538800 [Oryza sativa Japonica Group] g...    85   1e-14
gb|EOY27956.1| Pentatricopeptide, putative [Theobroma cacao]           84   2e-14
ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containi...    83   3e-14
ref|XP_006844669.1| hypothetical protein AMTR_s00016p00242080 [A...    83   3e-14
ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containi...    81   2e-13
ref|XP_006416898.1| hypothetical protein EUTSA_v10006770mg [Eutr...    80   3e-13
ref|XP_002306801.2| pentatricopeptide repeat-containing family p...    80   3e-13
gb|EEE55134.1| hypothetical protein OsJ_02921 [Oryza sativa Japo...    80   3e-13
gb|EAZ07809.1| hypothetical protein OsI_30067 [Oryza sativa Indi...    80   3e-13
ref|XP_004485987.1| PREDICTED: pentatricopeptide repeat-containi...    80   4e-13
ref|XP_002531058.1| pentatricopeptide repeat-containing protein,...    80   4e-13
gb|EOX96932.1| Tetratricopeptide repeat (TPR)-like superfamily p...    79   5e-13
ref|XP_006306315.1| hypothetical protein CARUB_v10012185mg [Caps...    79   5e-13

>ref|XP_006346624.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Solanum tuberosum]
          Length = 506

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 48/100 (48%), Positives = 61/100 (61%)
 Frame = +3

Query: 156 LPVDDYTFTXXXXXXXXXXXXREGENIHSLSLKLGFERHTFVLNSLIHMYFACGFNTSAR 335
           L +D++TF              +G  +H +SLKLGFE   FV NSLI+MYF CG    A+
Sbjct: 6   LILDNFTFPFVLKACGRLVSFHKGLEVHCVSLKLGFEFDVFVQNSLIYMYFQCGVVEFAQ 65

Query: 336 LVFDSADDSTRDVVSWNSLISGYLQSGMCREGLMVFRSMV 455
            VFD   DS RDVV+WNS+ISGYLQSG C   + VF  ++
Sbjct: 66  KVFDFIPDSVRDVVTWNSMISGYLQSGCCYLAVKVFGKLL 105



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
 Frame = +3

Query: 117 VAVPLF-HLLRAADLPVDDYTFTXXXXXXXXXXXXREGENIHSLSLKLGFERHTFVLNSL 293
           +AV +F  LLR +D+ ++D +                G+ IH L +  G     ++ +SL
Sbjct: 96  LAVKVFGKLLRESDVRLNDVSIVSALTACARTELLDVGKKIHGLIVVYGVVMDVYLGSSL 155

Query: 294 IHMYFACGFNTSARLVFDSADDSTRDVVSWNSLISGYLQSGMCREGLMVFRSMV 455
           + MY  CG    A+ VFD   D  +++VSW S+I+GYL+  MC+E + +FR M+
Sbjct: 156 VDMYTKCGCLEDAKTVFDRLLD--KNIVSWTSMIAGYLKCDMCKEAIELFRVML 207


>gb|EMT30724.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
          Length = 765

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 50/150 (33%), Positives = 80/150 (53%)
 Frame = +3

Query: 3   RHLRQCLAHAFAAGVLGXXXXXXXXXXXXXXXXXPNLDVAVPLFHLLRAADLPVDDYTFT 182
           RHL   L++A  +G+L                  P+L ++  L  L R+  +P+D+Y+ +
Sbjct: 33  RHLPLLLSYATVSGLLLKVPLLHSVLRSLSSGSVPSLSLSF-LSLLRRSGYMPIDNYSLS 91

Query: 183 XXXXXXXXXXXXREGENIHSLSLKLGFERHTFVLNSLIHMYFACGFNTSARLVFDSADDS 362
                         G  +H+LS+KLG    TFVLN+LI+MY +C + ++AR V DSA   
Sbjct: 92  AALSTAARMPSVVVGAQLHTLSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVLDSAPKG 151

Query: 363 TRDVVSWNSLISGYLQSGMCREGLMVFRSM 452
             D VSWN++I+GY+ +G+  + L+ F  M
Sbjct: 152 ASDTVSWNTIIAGYVHAGLPNKALLAFSQM 181



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 37/111 (33%), Positives = 56/111 (50%)
 Frame = +3

Query: 120 AVPLFHLLRAADLPVDDYTFTXXXXXXXXXXXXREGENIHSLSLKLGFERHTFVLNSLIH 299
           A+  F  +  A + +D+ T              + G+  H+L +  GFE + ++ +SLI 
Sbjct: 174 ALLAFSQMAKAQVMLDEVTLLNALVACARTCMMKVGKLCHALLVTNGFEINCYMGSSLIS 233

Query: 300 MYFACGFNTSARLVFDSADDSTRDVVSWNSLISGYLQSGMCREGLMVFRSM 452
           MY  CG    AR VFD   +  R+ V W S+ISGY Q G  +E + +FR M
Sbjct: 234 MYAKCGLVEDARRVFDGLPE--RNAVCWTSMISGYTQLGQSKEAVKLFRDM 282


>dbj|BAJ92058.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 581

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 50/150 (33%), Positives = 79/150 (52%)
 Frame = +3

Query: 3   RHLRQCLAHAFAAGVLGXXXXXXXXXXXXXXXXXPNLDVAVPLFHLLRAADLPVDDYTFT 182
           RHL   L++A  +G+L                  P+L ++  L  L R+  +P+D+Y+ +
Sbjct: 39  RHLPLLLSYATVSGLLLRVPLLHSVLRSLSSGPVPSLSLSF-LSLLRRSGYMPIDNYSLS 97

Query: 183 XXXXXXXXXXXXREGENIHSLSLKLGFERHTFVLNSLIHMYFACGFNTSARLVFDSADDS 362
                         G  +H+LS+KLG    TFVLN+LI+MY +C + ++AR V DSA   
Sbjct: 98  AALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVLDSAPKG 157

Query: 363 TRDVVSWNSLISGYLQSGMCREGLMVFRSM 452
             D VSWN++I+GY+ +G+  + L  F  M
Sbjct: 158 ASDTVSWNTIIAGYIHAGLPNKALQAFSQM 187



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 37/111 (33%), Positives = 55/111 (49%)
 Frame = +3

Query: 120 AVPLFHLLRAADLPVDDYTFTXXXXXXXXXXXXREGENIHSLSLKLGFERHTFVLNSLIH 299
           A+  F  +    + +DD T              + G+  H+L +  GFE + ++ +SLI 
Sbjct: 180 ALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLVTNGFEINCYMGSSLIS 239

Query: 300 MYFACGFNTSARLVFDSADDSTRDVVSWNSLISGYLQSGMCREGLMVFRSM 452
           MY  CG    AR +FD   D  R+ V W S+ISGY Q G  +E + +FR M
Sbjct: 240 MYAKCGQVEDARRIFDGMPD--RNAVCWTSMISGYTQLGQSKEAIKLFRDM 288


>dbj|BAJ95661.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 580

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 50/150 (33%), Positives = 79/150 (52%)
 Frame = +3

Query: 3   RHLRQCLAHAFAAGVLGXXXXXXXXXXXXXXXXXPNLDVAVPLFHLLRAADLPVDDYTFT 182
           RHL   L++A  +G+L                  P+L ++  L  L R+  +P+D+Y+ +
Sbjct: 39  RHLPLLLSYATVSGLLLRVPLLHSVLRSLSSGPVPSLSLSF-LSLLRRSGYMPIDNYSLS 97

Query: 183 XXXXXXXXXXXXREGENIHSLSLKLGFERHTFVLNSLIHMYFACGFNTSARLVFDSADDS 362
                         G  +H+LS+KLG    TFVLN+LI+MY +C + ++AR V DSA   
Sbjct: 98  AALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVLDSAPKG 157

Query: 363 TRDVVSWNSLISGYLQSGMCREGLMVFRSM 452
             D VSWN++I+GY+ +G+  + L  F  M
Sbjct: 158 ASDTVSWNTIIAGYIHAGLPNKALQAFSQM 187



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 37/111 (33%), Positives = 55/111 (49%)
 Frame = +3

Query: 120 AVPLFHLLRAADLPVDDYTFTXXXXXXXXXXXXREGENIHSLSLKLGFERHTFVLNSLIH 299
           A+  F  +    + +DD T              + G+  H+L +  GFE + ++ +SLI 
Sbjct: 180 ALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLVTNGFEINCYMGSSLIS 239

Query: 300 MYFACGFNTSARLVFDSADDSTRDVVSWNSLISGYLQSGMCREGLMVFRSM 452
           MY  CG    AR +FD   D  R+ V W S+ISGY Q G  +E + +FR M
Sbjct: 240 MYAKCGQVEDARRIFDGMPD--RNAVCWTSMISGYTQLGQSKEAIKLFRDM 288


>gb|EMJ13849.1| hypothetical protein PRUPE_ppa018206mg, partial [Prunus persica]
          Length = 604

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 45/108 (41%), Positives = 62/108 (57%)
 Frame = +3

Query: 129 LFHLLRAADLPVDDYTFTXXXXXXXXXXXXREGENIHSLSLKLGFERHTFVLNSLIHMYF 308
           L+H +    +  D +T+             REGE IHS++L+ GFE   FV N+L+HMY 
Sbjct: 118 LYHQMHVNSVEPDTHTYPFLLKAVAKLTNVREGEKIHSIALRNGFESLVFVKNTLLHMYA 177

Query: 309 ACGFNTSARLVFDSADDSTRDVVSWNSLISGYLQSGMCREGLMVFRSM 452
            CG   SA  VF+S   S RD+V+WNS+I+G+  +G   E L VFR M
Sbjct: 178 CCGHVESAHRVFESI--SERDLVAWNSVINGFALNGRPNEALTVFRDM 223


>ref|XP_002444669.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
           gi|241941019|gb|EES14164.1| hypothetical protein
           SORBIDRAFT_07g025740 [Sorghum bicolor]
          Length = 581

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 51/152 (33%), Positives = 75/152 (49%)
 Frame = +3

Query: 6   HLRQCLAHAFAAGVLGXXXXXXXXXXXXXXXXXPNLDVAVPLFHLLRAADLPVDDYTFTX 185
           H+   L+ +  +G+L                  P+L ++  L  L  +  + +D+Y+   
Sbjct: 40  HIPLLLSQSIVSGLLLKLPLVHSVLRSLSLGPFPSLSLSF-LSLLRHSGYVTLDNYSLNI 98

Query: 186 XXXXXXXXXXXREGENIHSLSLKLGFERHTFVLNSLIHMYFACGFNTSARLVFDSADDST 365
                        G  +HSLS+KLG    TFVLNSLI+MY +C +  +AR V DSA    
Sbjct: 99  AFSATSRLPSVSVGAQLHSLSVKLGLVSDTFVLNSLINMYSSCSYPATARQVLDSAPQGA 158

Query: 366 RDVVSWNSLISGYLQSGMCREGLMVFRSMVSK 461
            D VSWN++ISGYL+ GM  + L  F  MV +
Sbjct: 159 CDTVSWNTIISGYLRGGMPNKALQAFGQMVKE 190



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 36/111 (32%), Positives = 52/111 (46%)
 Frame = +3

Query: 120 AVPLFHLLRAADLPVDDYTFTXXXXXXXXXXXXREGENIHSLSLKLGFERHTFVLNSLIH 299
           A+  F  +    + +DD T              + G   HSL +  G   + ++ +SLI 
Sbjct: 180 ALQAFGQMVKEQVTLDDVTLLNALVASAKAGKVKVGRLCHSLVVVNGAGINCYMGSSLIS 239

Query: 300 MYFACGFNTSARLVFDSADDSTRDVVSWNSLISGYLQSGMCREGLMVFRSM 452
           MY  CG    AR VF    +  R+VV W S+ISGY Q G  +E + +FR M
Sbjct: 240 MYAKCGLVEDARKVFHGMHE--RNVVCWTSMISGYTQLGKFKEAVNLFRDM 288


>ref|XP_006585174.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like, partial [Glycine max]
          Length = 832

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 49/117 (41%), Positives = 63/117 (53%)
 Frame = +3

Query: 108 NLDVAVPLFHLLRAADLPVDDYTFTXXXXXXXXXXXXREGENIHSLSLKLGFERHTFVLN 287
           N   +V LF  ++   +  D YTFT            RE + +H   LKLGF  +  V+N
Sbjct: 199 NYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVN 258

Query: 288 SLIHMYFACGFNTSARLVFDSADDSTRDVVSWNSLISGYLQSGMCREGLMVFRSMVS 458
           SLI  YF CG   SAR++FD   D  RDVVSWNS+ISG   +G  R GL  F  M++
Sbjct: 259 SLIAAYFKCGEVESARILFDELSD--RDVVSWNSMISGCTMNGFSRNGLEFFIQMLN 313


>ref|NP_001062373.1| Os08g0538800 [Oryza sativa Japonica Group]
           gi|50725675|dbj|BAD33141.1| putative pentatricopeptide
           (PPR) repeat-containing protein [Oryza sativa Japonica
           Group] gi|113624342|dbj|BAF24287.1| Os08g0538800 [Oryza
           sativa Japonica Group] gi|215697775|dbj|BAG91968.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 581

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 52/152 (34%), Positives = 75/152 (49%)
 Frame = +3

Query: 6   HLRQCLAHAFAAGVLGXXXXXXXXXXXXXXXXXPNLDVAVPLFHLLRAADLPVDDYTFTX 185
           HL   L+ A  +G+L                  P+L  +  L  L R A++ +D+Y+   
Sbjct: 40  HLPILLSRATVSGLLLKLPLVHSVLRSLYLGPIPSLSFSF-LSLLRRFANMTLDNYSLNI 98

Query: 186 XXXXXXXXXXXREGENIHSLSLKLGFERHTFVLNSLIHMYFACGFNTSARLVFDSADDST 365
                        G   H+LSLKL     +FVLN+LI+MY +C +  SARLV DSA    
Sbjct: 99  AISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWA 158

Query: 366 RDVVSWNSLISGYLQSGMCREGLMVFRSMVSK 461
            DVVSWN++I+GY++ GM  + L  F  M  +
Sbjct: 159 SDVVSWNTIIAGYIRGGMPNKALQSFHQMAKE 190



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 35/111 (31%), Positives = 56/111 (50%)
 Frame = +3

Query: 120 AVPLFHLLRAADLPVDDYTFTXXXXXXXXXXXXREGENIHSLSLKLGFERHTFVLNSLIH 299
           A+  FH +    + +D+ T              + G   H+L +  GFE + ++ +SL+ 
Sbjct: 180 ALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNGFEINCYIGSSLVS 239

Query: 300 MYFACGFNTSARLVFDSADDSTRDVVSWNSLISGYLQSGMCREGLMVFRSM 452
           MY  CG    AR VF+   +  R+VV W S+I+G  QSG  +E + +FR M
Sbjct: 240 MYAKCGMVEEARRVFNRMPE--RNVVCWTSMIAGCTQSGRFKEAVDLFRDM 288


>gb|EOY27956.1| Pentatricopeptide, putative [Theobroma cacao]
          Length = 874

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 45/112 (40%), Positives = 64/112 (57%)
 Frame = +3

Query: 120 AVPLFHLLRAADLPVDDYTFTXXXXXXXXXXXXREGENIHSLSLKLGFERHTFVLNSLIH 299
           ++ LF ++    + VD YTF+            +EGE +H   LKLGF  +  V+NSLI 
Sbjct: 184 SIYLFKMMMKKGIEVDSYTFSCILKCLAASGGLKEGERVHGYLLKLGFGSYNSVVNSLIT 243

Query: 300 MYFACGFNTSARLVFDSADDSTRDVVSWNSLISGYLQSGMCREGLMVFRSMV 455
            YF      SA  +FD   D  RDV+SWNS+ISGY+ +G+  +GL VF+ M+
Sbjct: 244 FYFKGKRVESASELFDELID--RDVISWNSMISGYVSNGLAEKGLEVFKEML 293



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/76 (36%), Positives = 41/76 (53%)
 Frame = +3

Query: 225 GENIHSLSLKLGFERHTFVLNSLIHMYFACGFNTSARLVFDSADDSTRDVVSWNSLISGY 404
           G+ IH   L+ G+     V N+L+ +Y  CG    ARL+FD    S++D+VSW  +I+GY
Sbjct: 521 GKEIHGHILRNGYFSDRHVANALVDLYVKCGVLALARLLFDMI--SSKDLVSWTVMIAGY 578

Query: 405 LQSGMCREGLMVFRSM 452
              G   E +  F  M
Sbjct: 579 GMHGFANEAITTFNEM 594


>ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Citrus sinensis]
          Length = 872

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 45/117 (38%), Positives = 65/117 (55%)
 Frame = +3

Query: 108 NLDVAVPLFHLLRAADLPVDDYTFTXXXXXXXXXXXXREGENIHSLSLKLGFERHTFVLN 287
           N   ++ LF  +++  +  D YTF+            +EGE++H   LKLGF  +  VLN
Sbjct: 178 NFKESLYLFKKMQSLGIAADSYTFSCVLKCLAVVGNVKEGESVHGFMLKLGFGCNNTVLN 237

Query: 288 SLIHMYFACGFNTSARLVFDSADDSTRDVVSWNSLISGYLQSGMCREGLMVFRSMVS 458
           SLI  YF       A  +FD   D  RDVVSWN +ISGY+ +G+  +GL VF+ M++
Sbjct: 238 SLITYYFKSRRVKDAHKLFDELSD--RDVVSWNCMISGYIANGVAEKGLEVFKEMLN 292


>ref|XP_006844669.1| hypothetical protein AMTR_s00016p00242080 [Amborella trichopoda]
           gi|548847140|gb|ERN06344.1| hypothetical protein
           AMTR_s00016p00242080 [Amborella trichopoda]
          Length = 228

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 45/107 (42%), Positives = 60/107 (56%)
 Frame = +3

Query: 135 HLLRAADLPVDDYTFTXXXXXXXXXXXXREGENIHSLSLKLGFERHTFVLNSLIHMYFAC 314
           H+LR   L +D+YTF              +GE IH+ ++KLGFE   FV NS++ MY +C
Sbjct: 78  HILRHYFLSLDNYTFPFVFKACARLSLKPKGEEIHATTVKLGFESDVFVQNSMVSMYGSC 137

Query: 315 GFNTSARLVFDSADDSTRDVVSWNSLISGYLQSGMCREGLMVFRSMV 455
                A++VFDS    TRDVVSWN +I+ YLQ G     L  F  M+
Sbjct: 138 NSIREAKMVFDSM--KTRDVVSWNCIIACYLQRGESEHALKQFEEML 182


>ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 44/114 (38%), Positives = 62/114 (54%)
 Frame = +3

Query: 114 DVAVPLFHLLRAADLPVDDYTFTXXXXXXXXXXXXREGENIHSLSLKLGFERHTFVLNSL 293
           D A+ L+H +    +  D YTF               G  IH   ++ GFE    V+N+L
Sbjct: 189 DEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNAL 248

Query: 294 IHMYFACGFNTSARLVFDSADDSTRDVVSWNSLISGYLQSGMCREGLMVFRSMV 455
           I MY  CG   +ARLVFD   +  RD +SWN++ISGY ++G+C EGL +F  M+
Sbjct: 249 ITMYVKCGDVNTARLVFDKMPN--RDRISWNAMISGYFENGVCLEGLRLFGMMI 300


>ref|XP_006416898.1| hypothetical protein EUTSA_v10006770mg [Eutrema salsugineum]
           gi|557094669|gb|ESQ35251.1| hypothetical protein
           EUTSA_v10006770mg [Eutrema salsugineum]
          Length = 867

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 45/114 (39%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
 Frame = +3

Query: 114 DVAVPLFH-LLRAADLPVDDYTFTXXXXXXXXXXXXREGENIHSLSLKLGFERHTFVLNS 290
           D A+ L+H +L    +  D YTF               G  +H   L+ G+E    V+N+
Sbjct: 177 DEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVLRYGYELDIDVVNA 236

Query: 291 LIHMYFACGFNTSARLVFDSADDSTRDVVSWNSLISGYLQSGMCREGLMVFRSM 452
           LI MY  CG   SARL+FD      RD++SWN++ISGY ++GMC EGL +F +M
Sbjct: 237 LITMYVKCGDVKSARLLFDRMP--RRDIISWNAMISGYFENGMCHEGLKLFFAM 288


>ref|XP_002306801.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550339617|gb|EEE93797.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 818

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 43/111 (38%), Positives = 57/111 (51%)
 Frame = +3

Query: 120 AVPLFHLLRAADLPVDDYTFTXXXXXXXXXXXXREGENIHSLSLKLGFERHTFVLNSLIH 299
           A+ LF  +R   +P D +TF               G  IH L +K G++   FV NSL+ 
Sbjct: 25  ALELFREMRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVS 84

Query: 300 MYFACGFNTSARLVFDSADDSTRDVVSWNSLISGYLQSGMCREGLMVFRSM 452
           MY  C     AR +FD  ++   DVVSWNS+IS Y  +G C E L +FR M
Sbjct: 85  MYAKCNDILGARKLFDRMNE-RNDVVSWNSIISAYSLNGQCMEALGLFREM 134


>gb|EEE55134.1| hypothetical protein OsJ_02921 [Oryza sativa Japonica Group]
          Length = 493

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 40/102 (39%), Positives = 57/102 (55%)
 Frame = +3

Query: 156 LPVDDYTFTXXXXXXXXXXXXREGENIHSLSLKLGFERHTFVLNSLIHMYFACGFNTSAR 335
           + +D+Y+                G   H+LSLKL     +FVLN+LI+MY +C +  SAR
Sbjct: 1   MTLDNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASAR 60

Query: 336 LVFDSADDSTRDVVSWNSLISGYLQSGMCREGLMVFRSMVSK 461
           LV DSA     DVVSWN++I+GY++ GM  + L  F  M  +
Sbjct: 61  LVLDSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKE 102



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 35/111 (31%), Positives = 56/111 (50%)
 Frame = +3

Query: 120 AVPLFHLLRAADLPVDDYTFTXXXXXXXXXXXXREGENIHSLSLKLGFERHTFVLNSLIH 299
           A+  FH +    + +D+ T              + G   H+L +  GFE + ++ +SL+ 
Sbjct: 92  ALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNGFEINCYIGSSLVS 151

Query: 300 MYFACGFNTSARLVFDSADDSTRDVVSWNSLISGYLQSGMCREGLMVFRSM 452
           MY  CG    AR VF+   +  R+VV W S+I+G  QSG  +E + +FR M
Sbjct: 152 MYAKCGMVEEARRVFNRMPE--RNVVCWTSMIAGCTQSGRFKEAVDLFRDM 200


>gb|EAZ07809.1| hypothetical protein OsI_30067 [Oryza sativa Indica Group]
          Length = 642

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 40/102 (39%), Positives = 57/102 (55%)
 Frame = +3

Query: 156 LPVDDYTFTXXXXXXXXXXXXREGENIHSLSLKLGFERHTFVLNSLIHMYFACGFNTSAR 335
           + +D+Y+                G   H+LSLKL     +FVLN+LI+MY +C +  SAR
Sbjct: 1   MTLDNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASAR 60

Query: 336 LVFDSADDSTRDVVSWNSLISGYLQSGMCREGLMVFRSMVSK 461
           LV DSA     DVVSWN++I+GY++ GM  + L  F  M  +
Sbjct: 61  LVLDSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKE 102



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 35/111 (31%), Positives = 56/111 (50%)
 Frame = +3

Query: 120 AVPLFHLLRAADLPVDDYTFTXXXXXXXXXXXXREGENIHSLSLKLGFERHTFVLNSLIH 299
           A+  FH +    + +D+ T              + G   H+L +  GFE + ++ +SL+ 
Sbjct: 92  ALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNGFEINCYIGSSLVS 151

Query: 300 MYFACGFNTSARLVFDSADDSTRDVVSWNSLISGYLQSGMCREGLMVFRSM 452
           MY  CG    AR VF+   +  R+VV W S+I+G  QSG  +E + +FR M
Sbjct: 152 MYAKCGMVEEARRVFNRMPE--RNVVCWTSMIAGCTQSGRFKEAVDLFRDM 200


>ref|XP_004485987.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cicer arietinum]
          Length = 610

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 43/115 (37%), Positives = 65/115 (56%)
 Frame = +3

Query: 108 NLDVAVPLFHLLRAADLPVDDYTFTXXXXXXXXXXXXREGENIHSLSLKLGFERHTFVLN 287
           N   A+P +  +  + +  D +T+             REGE IHS++++ GFE   FV N
Sbjct: 117 NSSPALPFYRKMLVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLIFVRN 176

Query: 288 SLIHMYFACGFNTSARLVFDSADDSTRDVVSWNSLISGYLQSGMCREGLMVFRSM 452
           SL+H+Y ACG   SA  VF+   +  RD+V+WNS+I+G+  +G   E L +FR M
Sbjct: 177 SLLHIYAACGDTESAYKVFELMGE--RDLVAWNSVINGFALNGKPNEALSLFREM 229


>ref|XP_002531058.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529353|gb|EEF31319.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 341

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 43/111 (38%), Positives = 61/111 (54%)
 Frame = +3

Query: 120 AVPLFHLLRAADLPVDDYTFTXXXXXXXXXXXXREGENIHSLSLKLGFERHTFVLNSLIH 299
           A+ L+H L    +  D +T+             R GE IHS+S++ GFE   FV NSL+H
Sbjct: 124 AIELYHRLHFNSIEPDTHTYPFLLKAVSKMVNVRVGEKIHSISIRNGFESLVFVQNSLMH 183

Query: 300 MYFACGFNTSARLVFDSADDSTRDVVSWNSLISGYLQSGMCREGLMVFRSM 452
           MY ACG   SA  +F+   D  RD+V+WN+ ISG+  +G   E L ++  M
Sbjct: 184 MYAACGQYESAHKLFEFMPD--RDLVAWNTAISGFALNGKPNEALKLYMEM 232


>gb|EOX96932.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
           [Theobroma cacao] gi|508705037|gb|EOX96933.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao] gi|508705038|gb|EOX96934.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao]
          Length = 616

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 43/115 (37%), Positives = 65/115 (56%)
 Frame = +3

Query: 108 NLDVAVPLFHLLRAADLPVDDYTFTXXXXXXXXXXXXREGENIHSLSLKLGFERHTFVLN 287
           N + A+ L+  ++A+ +  D +T+             R GEN+HS  ++ GFE   FV N
Sbjct: 123 NPEPALELYRQMQASCIEPDTHTYPFLLKAVAKLADIRVGENMHSTVIRNGFESLVFVQN 182

Query: 288 SLIHMYFACGFNTSARLVFDSADDSTRDVVSWNSLISGYLQSGMCREGLMVFRSM 452
           S++HMY ACG   SA  +F+      RDVV+WNS+I+G+  +G   E L +FR M
Sbjct: 183 SMLHMYAACGLVDSAYKMFELM--PARDVVAWNSVINGFALNGKPNEALTLFREM 235


>ref|XP_006306315.1| hypothetical protein CARUB_v10012185mg [Capsella rubella]
           gi|482575026|gb|EOA39213.1| hypothetical protein
           CARUB_v10012185mg [Capsella rubella]
          Length = 866

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 45/115 (39%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
 Frame = +3

Query: 111 LDVAVPLFH-LLRAADLPVDDYTFTXXXXXXXXXXXXREGENIHSLSLKLGFERHTFVLN 287
           LD A+ L+H +L    +  D YTF               G  +H   ++ G+E    V+N
Sbjct: 176 LDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVN 235

Query: 288 SLIHMYFACGFNTSARLVFDSADDSTRDVVSWNSLISGYLQSGMCREGLMVFRSM 452
           +LI MY  CG   SARL+FD      RD++SWN++ISGY ++GMC EGL +F +M
Sbjct: 236 ALITMYVKCGDVKSARLLFDRMP--RRDIISWNAMISGYFENGMCYEGLELFFAM 288