BLASTX nr result

ID: Zingiber25_contig00041783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00041783
         (328 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006306165.1| hypothetical protein CARUB_v10011717mg [Caps...    55   1e-05

>ref|XP_006306165.1| hypothetical protein CARUB_v10011717mg [Capsella rubella]
           gi|482574876|gb|EOA39063.1| hypothetical protein
           CARUB_v10011717mg [Capsella rubella]
          Length = 448

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/49 (57%), Positives = 36/49 (73%)
 Frame = +2

Query: 182 LASNNVFA*PIVFVQVPAAGLLVQESLHELLVPDVRARSAAALDGLLPG 328
           + +N +FA  I+F QV + GL VQES   +LVPDVR+ SAA+ DGLLPG
Sbjct: 185 IVANVIFAYAIIFTQVVSVGLPVQESFPGVLVPDVRSSSAASRDGLLPG 233


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