BLASTX nr result
ID: Zingiber25_contig00041732
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00041732
(353 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006651838.1| PREDICTED: pentatricopeptide repeat-containi... 77 2e-12
ref|NP_001051352.1| Os03g0761300 [Oryza sativa Japonica Group] g... 77 2e-12
gb|EMT17594.1| hypothetical protein F775_21503 [Aegilops tauschii] 75 7e-12
gb|EMS57179.1| hypothetical protein TRIUR3_17663 [Triticum urartu] 75 7e-12
ref|XP_003559090.1| PREDICTED: pentatricopeptide repeat-containi... 75 7e-12
dbj|BAK03984.1| predicted protein [Hordeum vulgare subsp. vulgare] 75 7e-12
ref|XP_004981676.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-11
ref|XP_002466773.1| hypothetical protein SORBIDRAFT_01g013990 [S... 74 2e-11
ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays] ... 73 5e-11
ref|XP_002520317.1| pentatricopeptide repeat-containing protein,... 70 3e-10
ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containi... 69 9e-10
ref|XP_006849933.1| hypothetical protein AMTR_s00022p00121040 [A... 67 2e-09
gb|EOY16398.1| Tetratricopeptide repeat (TPR)-like superfamily p... 66 6e-09
gb|ESW09460.1| hypothetical protein PHAVU_009G129200g [Phaseolus... 65 7e-09
ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containi... 65 7e-09
emb|CBI18974.3| unnamed protein product [Vitis vinifera] 65 7e-09
ref|XP_006472835.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
ref|XP_006434266.1| hypothetical protein CICLE_v10000990mg [Citr... 64 2e-08
ref|XP_003526650.2| PREDICTED: pentatricopeptide repeat-containi... 64 3e-08
ref|XP_006581591.1| PREDICTED: pentatricopeptide repeat-containi... 64 3e-08
>ref|XP_006651838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Oryza brachyantha]
Length = 481
Score = 77.0 bits (188), Expect = 2e-12
Identities = 35/42 (83%), Positives = 40/42 (95%)
Frame = -3
Query: 351 GIRPPGTTFGKLRHLLLKEGRKDVLEFLVAKMNVLIEEPLYD 226
GIRPPG+TFGKLR LLLKEGRKDVL+FLV KMN+LI+EPL+D
Sbjct: 440 GIRPPGSTFGKLRQLLLKEGRKDVLDFLVKKMNILIQEPLFD 481
>ref|NP_001051352.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|14488357|gb|AAK63924.1|AC084282_5 unknown protein
[Oryza sativa Japonica Group]
gi|108711214|gb|ABF99009.1| pentatricopeptide, putative,
expressed [Oryza sativa Japonica Group]
gi|113549823|dbj|BAF13266.1| Os03g0761300 [Oryza sativa
Japonica Group] gi|125545804|gb|EAY91943.1| hypothetical
protein OsI_13630 [Oryza sativa Indica Group]
gi|125588003|gb|EAZ28667.1| hypothetical protein
OsJ_12678 [Oryza sativa Japonica Group]
Length = 484
Score = 77.0 bits (188), Expect = 2e-12
Identities = 35/42 (83%), Positives = 40/42 (95%)
Frame = -3
Query: 351 GIRPPGTTFGKLRHLLLKEGRKDVLEFLVAKMNVLIEEPLYD 226
GIRPPG+TFGKLR LLLKEGRKDVL+FLV KMN+LI+EPL+D
Sbjct: 443 GIRPPGSTFGKLRQLLLKEGRKDVLDFLVEKMNILIQEPLFD 484
>gb|EMT17594.1| hypothetical protein F775_21503 [Aegilops tauschii]
Length = 449
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/42 (83%), Positives = 39/42 (92%)
Frame = -3
Query: 351 GIRPPGTTFGKLRHLLLKEGRKDVLEFLVAKMNVLIEEPLYD 226
GIRPPG+TFGKLR LLLKEGRKDVLEFLV KM +LI+EPL+D
Sbjct: 408 GIRPPGSTFGKLRQLLLKEGRKDVLEFLVDKMKILIQEPLFD 449
>gb|EMS57179.1| hypothetical protein TRIUR3_17663 [Triticum urartu]
Length = 416
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/42 (83%), Positives = 39/42 (92%)
Frame = -3
Query: 351 GIRPPGTTFGKLRHLLLKEGRKDVLEFLVAKMNVLIEEPLYD 226
GIRPPG+TFGKLR LLLKEGRKDVLEFLV KM +LI+EPL+D
Sbjct: 375 GIRPPGSTFGKLRQLLLKEGRKDVLEFLVDKMKILIQEPLFD 416
>ref|XP_003559090.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Brachypodium distachyon]
Length = 486
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/42 (83%), Positives = 39/42 (92%)
Frame = -3
Query: 351 GIRPPGTTFGKLRHLLLKEGRKDVLEFLVAKMNVLIEEPLYD 226
GIRPPG+TFGKLR LLLKEGRKDVLEFLV KM +LI+EPL+D
Sbjct: 445 GIRPPGSTFGKLRQLLLKEGRKDVLEFLVDKMKILIQEPLFD 486
>dbj|BAK03984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 485
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/42 (83%), Positives = 39/42 (92%)
Frame = -3
Query: 351 GIRPPGTTFGKLRHLLLKEGRKDVLEFLVAKMNVLIEEPLYD 226
GIRPPG+TFGKLR LLLKEGRKDVLEFLV KM +LI+EPL+D
Sbjct: 444 GIRPPGSTFGKLRQLLLKEGRKDVLEFLVDKMKILIQEPLFD 485
>ref|XP_004981676.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like isoform X1 [Setaria italica]
Length = 487
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/42 (80%), Positives = 39/42 (92%)
Frame = -3
Query: 351 GIRPPGTTFGKLRHLLLKEGRKDVLEFLVAKMNVLIEEPLYD 226
GIRPPG+TFGKLR LLLKEGRKDVL+FLV KM +LI+EPL+D
Sbjct: 446 GIRPPGSTFGKLRQLLLKEGRKDVLDFLVEKMKILIQEPLFD 487
>ref|XP_002466773.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
gi|241920627|gb|EER93771.1| hypothetical protein
SORBIDRAFT_01g013990 [Sorghum bicolor]
Length = 487
Score = 73.9 bits (180), Expect = 2e-11
Identities = 34/42 (80%), Positives = 39/42 (92%)
Frame = -3
Query: 351 GIRPPGTTFGKLRHLLLKEGRKDVLEFLVAKMNVLIEEPLYD 226
GIRPPG+TFGKLR LLLKEGRKDVL+FLV KM +LI+EPL+D
Sbjct: 446 GIRPPGSTFGKLRQLLLKEGRKDVLDFLVEKMKMLIQEPLFD 487
>ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays]
gi|312064725|gb|ADQ27447.1| pentatricopeptide repeat
protein [Zea mays] gi|414872960|tpg|DAA51517.1| TPA:
hypothetical protein ZEAMMB73_325693 [Zea mays]
Length = 489
Score = 72.8 bits (177), Expect = 5e-11
Identities = 33/42 (78%), Positives = 38/42 (90%)
Frame = -3
Query: 351 GIRPPGTTFGKLRHLLLKEGRKDVLEFLVAKMNVLIEEPLYD 226
GIRPPG+TFGKLR LLLKEGRKDVL+FLV KM +L +EPL+D
Sbjct: 448 GIRPPGSTFGKLRQLLLKEGRKDVLDFLVEKMKILAQEPLFD 489
>ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540536|gb|EEF42103.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 439
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/42 (76%), Positives = 38/42 (90%)
Frame = -3
Query: 351 GIRPPGTTFGKLRHLLLKEGRKDVLEFLVAKMNVLIEEPLYD 226
GIRP G TFG+LRHLL+KEGR+DVLEFL K+NVLI+EPL+D
Sbjct: 398 GIRPSGVTFGRLRHLLIKEGREDVLEFLQQKINVLIKEPLWD 439
>ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
gi|449499065|ref|XP_004160711.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 439
Score = 68.6 bits (166), Expect = 9e-10
Identities = 31/42 (73%), Positives = 37/42 (88%)
Frame = -3
Query: 351 GIRPPGTTFGKLRHLLLKEGRKDVLEFLVAKMNVLIEEPLYD 226
GIRP G TFG+LRHLL+KEGRKDVL+FL KMN+L++EPL D
Sbjct: 398 GIRPSGATFGRLRHLLIKEGRKDVLKFLQEKMNLLVKEPLCD 439
>ref|XP_006849933.1| hypothetical protein AMTR_s00022p00121040 [Amborella trichopoda]
gi|548853531|gb|ERN11514.1| hypothetical protein
AMTR_s00022p00121040 [Amborella trichopoda]
Length = 438
Score = 67.4 bits (163), Expect = 2e-09
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = -3
Query: 351 GIRPPGTTFGKLRHLLLKEGRKDVLEFLVAKMNVLIEEPLYD 226
GIRPP TF ++R LLLKEGRKDVLEFLV KMNVLI+EPL D
Sbjct: 397 GIRPPDLTFRRVRQLLLKEGRKDVLEFLVEKMNVLIKEPLND 438
>gb|EOY16398.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
[Theobroma cacao] gi|508724502|gb|EOY16399.1|
Tetratricopeptide repeat (TPR)-like superfamily protein
isoform 1 [Theobroma cacao] gi|508724503|gb|EOY16400.1|
Tetratricopeptide repeat (TPR)-like superfamily protein
isoform 1 [Theobroma cacao] gi|508724504|gb|EOY16401.1|
Tetratricopeptide repeat (TPR)-like superfamily protein
isoform 1 [Theobroma cacao] gi|508724505|gb|EOY16402.1|
Tetratricopeptide repeat (TPR)-like superfamily protein
isoform 1 [Theobroma cacao]
Length = 480
Score = 65.9 bits (159), Expect = 6e-09
Identities = 30/42 (71%), Positives = 37/42 (88%)
Frame = -3
Query: 351 GIRPPGTTFGKLRHLLLKEGRKDVLEFLVAKMNVLIEEPLYD 226
GI+P G TFG+LR LL+KEGR+DVL+FL KMN+LI+EPLYD
Sbjct: 439 GIQPSGLTFGRLRQLLIKEGREDVLKFLQEKMNLLIKEPLYD 480
>gb|ESW09460.1| hypothetical protein PHAVU_009G129200g [Phaseolus vulgaris]
gi|561010554|gb|ESW09461.1| hypothetical protein
PHAVU_009G129200g [Phaseolus vulgaris]
Length = 480
Score = 65.5 bits (158), Expect = 7e-09
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = -3
Query: 351 GIRPPGTTFGKLRHLLLKEGRKDVLEFLVAKMNVLIEEPLYD 226
GIRP TFG+LR LLLKEGR+DVL+FL KMNVL++EPLYD
Sbjct: 439 GIRPSRITFGRLRQLLLKEGREDVLKFLHEKMNVLVKEPLYD 480
>ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 476
Score = 65.5 bits (158), Expect = 7e-09
Identities = 30/46 (65%), Positives = 38/46 (82%)
Frame = -3
Query: 351 GIRPPGTTFGKLRHLLLKEGRKDVLEFLVAKMNVLIEEPLYD*ELV 214
GIRP TFGKL+ LL+KEGR+DVLEFL KMN+L++EPL D E++
Sbjct: 419 GIRPSSVTFGKLKQLLIKEGREDVLEFLQEKMNLLVKEPLCDQEII 464
>emb|CBI18974.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 65.5 bits (158), Expect = 7e-09
Identities = 30/46 (65%), Positives = 38/46 (82%)
Frame = -3
Query: 351 GIRPPGTTFGKLRHLLLKEGRKDVLEFLVAKMNVLIEEPLYD*ELV 214
GIRP TFGKL+ LL+KEGR+DVLEFL KMN+L++EPL D E++
Sbjct: 267 GIRPSSVTFGKLKQLLIKEGREDVLEFLQEKMNLLVKEPLCDQEII 312
>ref|XP_006472835.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like isoform X1 [Citrus sinensis]
gi|568837650|ref|XP_006472836.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like isoform X2 [Citrus sinensis]
gi|568837652|ref|XP_006472837.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like isoform X3 [Citrus sinensis]
gi|568837654|ref|XP_006472838.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like isoform X4 [Citrus sinensis]
Length = 480
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/42 (71%), Positives = 36/42 (85%)
Frame = -3
Query: 351 GIRPPGTTFGKLRHLLLKEGRKDVLEFLVAKMNVLIEEPLYD 226
GIRP G TFGKLR LL+KEGR+DVL+FL KMN+L++EPL D
Sbjct: 439 GIRPSGETFGKLRKLLIKEGREDVLKFLQEKMNLLVKEPLCD 480
>ref|XP_006434266.1| hypothetical protein CICLE_v10000990mg [Citrus clementina]
gi|567883417|ref|XP_006434267.1| hypothetical protein
CICLE_v10000990mg [Citrus clementina]
gi|567883419|ref|XP_006434268.1| hypothetical protein
CICLE_v10000990mg [Citrus clementina]
gi|567883421|ref|XP_006434269.1| hypothetical protein
CICLE_v10000990mg [Citrus clementina]
gi|567883423|ref|XP_006434270.1| hypothetical protein
CICLE_v10000990mg [Citrus clementina]
gi|557536388|gb|ESR47506.1| hypothetical protein
CICLE_v10000990mg [Citrus clementina]
gi|557536389|gb|ESR47507.1| hypothetical protein
CICLE_v10000990mg [Citrus clementina]
gi|557536390|gb|ESR47508.1| hypothetical protein
CICLE_v10000990mg [Citrus clementina]
gi|557536391|gb|ESR47509.1| hypothetical protein
CICLE_v10000990mg [Citrus clementina]
gi|557536392|gb|ESR47510.1| hypothetical protein
CICLE_v10000990mg [Citrus clementina]
Length = 480
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = -3
Query: 351 GIRPPGTTFGKLRHLLLKEGRKDVLEFLVAKMNVLIEEPLYD 226
GIRP G TFGKLR LL+KEGR+DVL+FL KMN+L+ EPL D
Sbjct: 439 GIRPSGETFGKLRKLLIKEGREDVLKFLQEKMNLLVNEPLCD 480
>ref|XP_003526650.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like isoform X1 [Glycine max]
Length = 454
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/42 (69%), Positives = 36/42 (85%)
Frame = -3
Query: 351 GIRPPGTTFGKLRHLLLKEGRKDVLEFLVAKMNVLIEEPLYD 226
GIRP TFG+LR LL+KEGR+DVL+FL KMN+L++EPLYD
Sbjct: 413 GIRPSRITFGRLRQLLIKEGREDVLKFLHEKMNLLVKEPLYD 454
>ref|XP_006581591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like isoform X2 [Glycine max]
gi|571460055|ref|XP_006581592.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like isoform X3 [Glycine max]
gi|571460057|ref|XP_006581593.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like isoform X4 [Glycine max]
gi|571460059|ref|XP_006581594.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like isoform X5 [Glycine max]
gi|571460061|ref|XP_006581595.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like isoform X6 [Glycine max]
Length = 481
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/42 (69%), Positives = 36/42 (85%)
Frame = -3
Query: 351 GIRPPGTTFGKLRHLLLKEGRKDVLEFLVAKMNVLIEEPLYD 226
GIRP TFG+LR LL+KEGR+DVL+FL KMN+L++EPLYD
Sbjct: 440 GIRPSRITFGRLRQLLIKEGREDVLKFLHEKMNLLVKEPLYD 481